Clone Name | FLbaf89k16 |
---|---|
Clone Library Name | barley_pub |
>emb|CT830106.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI013K07, full insert sequence Length = 1003 Score = 321 bits (162), Expect = 2e-84 Identities = 327/382 (85%) Strand = Plus / Plus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 348 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 407 Query: 213 tatggaccaaagtggagataatgccatgccctcggctcagcaacaggaacaagtaatcaa 272 ||||||||||| || |||||| |||||||||| ||||| |||||||| || |||||| Sbjct: 408 tatggaccaaactgaagataactccatgccctcagctcaagaacaggaattagcaatcaa 467 Query: 273 aaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcg 332 ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| ||||| || Sbjct: 468 gaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacg 527 Query: 333 ggcctattttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaa 392 ||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| || Sbjct: 528 ggcctattttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaa 587 Query: 393 acccaaaggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaaca 452 |||||||||||| || |||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 588 acccaaaggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagca 647 Query: 453 acgttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtc 512 ||||| ||| ||| || ||| |||||||||||||||||||||||| || ||||| | Sbjct: 648 gcgttccaggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgc 707 Query: 513 ggaggacatgaatatcaactga 534 ||||| ||||| ||||||||| Sbjct: 708 tgaggatatgaacatcaactga 729
>ref|NM_001049125.1| Oryza sativa (japonica cultivar-group) Os01g0249300 (Os01g0249300) mRNA, complete cds Length = 948 Score = 321 bits (162), Expect = 2e-84 Identities = 327/382 (85%) Strand = Plus / Plus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 295 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 354 Query: 213 tatggaccaaagtggagataatgccatgccctcggctcagcaacaggaacaagtaatcaa 272 ||||||||||| || |||||| |||||||||| ||||| |||||||| || |||||| Sbjct: 355 tatggaccaaactgaagataactccatgccctcagctcaagaacaggaattagcaatcaa 414 Query: 273 aaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcg 332 ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| ||||| || Sbjct: 415 gaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacg 474 Query: 333 ggcctattttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaa 392 ||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| || Sbjct: 475 ggcctattttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaa 534 Query: 393 acccaaaggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaaca 452 |||||||||||| || |||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 535 acccaaaggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagca 594 Query: 453 acgttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtc 512 ||||| ||| ||| || ||| |||||||||||||||||||||||| || ||||| | Sbjct: 595 gcgttccaggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgc 654 Query: 513 ggaggacatgaatatcaactga 534 ||||| ||||| ||||||||| Sbjct: 655 tgaggatatgaacatcaactga 676
>dbj|AK061748.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-G04, full insert sequence Length = 948 Score = 321 bits (162), Expect = 2e-84 Identities = 327/382 (85%) Strand = Plus / Plus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 295 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 354 Query: 213 tatggaccaaagtggagataatgccatgccctcggctcagcaacaggaacaagtaatcaa 272 ||||||||||| || |||||| |||||||||| ||||| |||||||| || |||||| Sbjct: 355 tatggaccaaactgaagataactccatgccctcagctcaagaacaggaattagcaatcaa 414 Query: 273 aaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcg 332 ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| ||||| || Sbjct: 415 gaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaaggatcatgaacg 474 Query: 333 ggcctattttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaaa 392 ||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| || Sbjct: 475 ggcctattttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcgaa 534 Query: 393 acccaaaggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaaca 452 |||||||||||| || |||||||| ||||||||||||||||| || ||||||||||| || Sbjct: 535 acccaaaggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagca 594 Query: 453 acgttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggtc 512 ||||| ||| ||| || ||| |||||||||||||||||||||||| || ||||| | Sbjct: 595 gcgttccaggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtgc 654 Query: 513 ggaggacatgaatatcaactga 534 ||||| ||||| ||||||||| Sbjct: 655 tgaggatatgaacatcaactga 676
>dbj|AK066274.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013061O18, full insert sequence Length = 2109 Score = 307 bits (155), Expect = 3e-80 Identities = 327/383 (85%), Gaps = 1/383 (0%) Strand = Plus / Plus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 1444 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 1503 Query: 213 tatggaccaaagtggagataatgccatgccctcggctcagcaacaggaacaagtaatcaa 272 ||||||||||| || |||||| |||||||||| ||||| |||||||| || |||||| Sbjct: 1504 tatggaccaaactgaagataactccatgccctcagctcaagaacaggaattagcaatcaa 1563 Query: 273 aaagaagtttggaggactaattcctaaaaag-ccaccgctcatctcaaaggaccatgagc 331 ||||| |||||||||||||| || ||||| ||||| |||||||| ||||| ||||| | Sbjct: 1564 gaagaaatttggaggactaatgccaaaaaaaaccaccactcatctcgaaggatcatgaac 1623 Query: 332 gggcctattttgattctgctgattgggctctcggaaagtctggacagcaaggtgttgcaa 391 |||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||| | Sbjct: 1624 gggcctattttgattctgctgactgggctctgggaaagtctggacagcaaggcgctgcga 1683 Query: 392 aacccaaaggaccgctcgaggcactcaggccaaagttgcagcccacgcgacaacagcaac 451 ||||||||||||| || |||||||| ||||||||||||||||| || ||||||||||| | Sbjct: 1684 aacccaaaggacctcttgaggcacttaggccaaagttgcagccaacacgacaacagcagc 1743 Query: 452 aacgttcaaggagctccatctacagctcatcagaaaacgaggatggagatggcgctgggt 511 | ||||| ||| ||| || ||| |||||||||||||||||||||||| || ||||| Sbjct: 1744 agcgttccaggcgcttgattaacacctcatcagaaaacgaggatggagacggtgctggtg 1803 Query: 512 cggaggacatgaatatcaactga 534 | ||||| ||||| ||||||||| Sbjct: 1804 ctgaggatatgaacatcaactga 1826
>gb|DQ245365.1| Zea mays clone 14787 mRNA sequence Length = 797 Score = 210 bits (106), Expect = 6e-51 Identities = 278/336 (82%), Gaps = 12/336 (3%) Strand = Plus / Plus Query: 198 tggaaattctgaacctatggaccaaagtggagataatgccatgccctcggctcagcaaca 257 ||||||| || ||||||||||||||| || ||| ||| | |||||||| || |||||||| Sbjct: 267 tggaaatcctcaacctatggaccaaactgaagacaattctatgccctcagcacagcaaca 326 Query: 258 ggaacaagtaatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctc 317 |||| ||| |||||| |||||||||||||||||||| || |||||||| || |||||||| Sbjct: 327 ggaagaagcaatcaagaagaagtttggaggactaatgcccaaaaagcccccactcatctc 386 Query: 318 aaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaagtctggaca 377 |||||| |||||||||||||| |||||||||||||| |||||||| || || Sbjct: 387 aaaggatcatgagcgggcctactttgattctgctgactgggctctagggaa--------- 437 Query: 378 gcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagttgcagcccac 437 |||||||||||| ||||| ||||||||||| |||||||| ||||| ||| | ||||| || Sbjct: 438 gcaaggtgttgccaaaccaaaaggaccgctggaggcacttaggcccaagcttcagccaac 497 Query: 438 gcg---acaacagcaacaacgttcaaggagctccatctacagctcatcagaaaacgagga 494 || |||||||||||||||| ||||| || | || |||| || |||||||||||||| Sbjct: 498 acgccaacaacagcaacaacgtgcaaggcgccctatttacacttcgtcagaaaacgagga 557 Query: 495 tggagatggcgctgggtcggaggacatgaatatcaa 530 ||||| || ||||| | ||||| ||||| ||||| Sbjct: 558 cggagacggggctggtgctgaggatatgaacatcaa 593
>gb|DQ244713.1| Zea mays clone 10242 mRNA sequence Length = 830 Score = 210 bits (106), Expect = 6e-51 Identities = 278/336 (82%), Gaps = 12/336 (3%) Strand = Plus / Plus Query: 198 tggaaattctgaacctatggaccaaagtggagataatgccatgccctcggctcagcaaca 257 ||||||| || ||||||||||||||| || ||| ||| | |||||||| || |||||||| Sbjct: 282 tggaaatcctcaacctatggaccaaactgaagacaattctatgccctcagcacagcaaca 341 Query: 258 ggaacaagtaatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctc 317 |||| ||| |||||| |||||||||||||||||||| || |||||||| || |||||||| Sbjct: 342 ggaagaagcaatcaagaagaagtttggaggactaatgcccaaaaagcccccactcatctc 401 Query: 318 aaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaagtctggaca 377 |||||| |||||||||||||| |||||||||||||| |||||||| || || Sbjct: 402 aaaggatcatgagcgggcctactttgattctgctgactgggctctagggaa--------- 452 Query: 378 gcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagttgcagcccac 437 |||||||||||| ||||| ||||||||||| |||||||| ||||| ||| | ||||| || Sbjct: 453 gcaaggtgttgccaaaccaaaaggaccgctggaggcacttaggcccaagcttcagccaac 512 Query: 438 gcg---acaacagcaacaacgttcaaggagctccatctacagctcatcagaaaacgagga 494 || |||||||||||||||| ||||| || | || |||| || |||||||||||||| Sbjct: 513 acgccaacaacagcaacaacgtgcaaggcgccctatttacacttcgtcagaaaacgagga 572 Query: 495 tggagatggcgctgggtcggaggacatgaatatcaa 530 ||||| || ||||| | ||||| ||||| ||||| Sbjct: 573 cggagacggggctggtgctgaggatatgaacatcaa 608
>gb|AY108494.1| Zea mays PCO113418 mRNA sequence Length = 1007 Score = 210 bits (106), Expect = 6e-51 Identities = 278/336 (82%), Gaps = 12/336 (3%) Strand = Plus / Plus Query: 198 tggaaattctgaacctatggaccaaagtggagataatgccatgccctcggctcagcaaca 257 ||||||| || ||||||||||||||| || ||| ||| | |||||||| || |||||||| Sbjct: 488 tggaaatcctcaacctatggaccaaactgaagacaattctatgccctcagcacagcaaca 547 Query: 258 ggaacaagtaatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctc 317 |||| ||| |||||| |||||||||||||||||||| || |||||||| || |||||||| Sbjct: 548 ggaagaagcaatcaagaagaagtttggaggactaatgcccaaaaagcccccactcatctc 607 Query: 318 aaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaagtctggaca 377 |||||| |||||||||||||| |||||||||||||| |||||||| || || Sbjct: 608 aaaggatcatgagcgggcctactttgattctgctgactgggctctagggaa--------- 658 Query: 378 gcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagttgcagcccac 437 |||||||||||| ||||| ||||||||||| |||||||| ||||| ||| | ||||| || Sbjct: 659 gcaaggtgttgccaaaccaaaaggaccgctggaggcacttaggcccaagcttcagccaac 718 Query: 438 gcg---acaacagcaacaacgttcaaggagctccatctacagctcatcagaaaacgagga 494 || |||||||||||||||| ||||| || | || |||| || |||||||||||||| Sbjct: 719 acgccaacaacagcaacaacgtgcaaggcgccctatttacacttcgtcagaaaacgagga 778 Query: 495 tggagatggcgctgggtcggaggacatgaatatcaa 530 ||||| || ||||| | ||||| ||||| ||||| Sbjct: 779 cggagacggggctggtgctgaggatatgaacatcaa 814
>gb|BT018355.1| Zea mays clone EL01T0403H09.c mRNA sequence Length = 738 Score = 202 bits (102), Expect = 1e-48 Identities = 277/336 (82%), Gaps = 12/336 (3%) Strand = Plus / Plus Query: 198 tggaaattctgaacctatggaccaaagtggagataatgccatgccctcggctcagcaaca 257 ||||||| || ||||||||||||||| || ||| ||| |||||||| || |||||||| Sbjct: 202 tggaaatcctcaacctatggaccaaactgaagacaattttatgccctcagcacagcaaca 261 Query: 258 ggaacaagtaatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctc 317 |||| ||| |||||| |||||||||||||||||||| || |||||||| || |||||||| Sbjct: 262 ggaagaagcaatcaagaagaagtttggaggactaatgcccaaaaagcccccactcatctc 321 Query: 318 aaaggaccatgagcgggcctattttgattctgctgattgggctctcggaaagtctggaca 377 |||||| |||||||||||||| |||||||||||||| |||||||| || || Sbjct: 322 aaaggatcatgagcgggcctactttgattctgctgactgggctctagggaa--------- 372 Query: 378 gcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagttgcagcccac 437 |||||||||||| ||||| ||||||||||| |||||||| ||||| ||| | ||||| || Sbjct: 373 gcaaggtgttgccaaaccaaaaggaccgctggaggcacttaggcccaagcttcagccaac 432 Query: 438 gcg---acaacagcaacaacgttcaaggagctccatctacagctcatcagaaaacgagga 494 || |||||||||||||||| ||||| || | || |||| || |||||||||||||| Sbjct: 433 acgccaacaacagcaacaacgtgcaaggcgccctatttacacttcgtcagaaaacgagga 492 Query: 495 tggagatggcgctgggtcggaggacatgaatatcaa 530 ||||| || ||||| | ||||| ||||| ||||| Sbjct: 493 cggagacggggctggtgctgaggatatgaacatcaa 528
>gb|AC007789.1| Oryza sativa BAC OSJNBa0049B20 genomic sequence, complete sequence Length = 182756 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 368 agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 427 |||||||||||||||| | ||| |||||||||||||| || |||||||| |||||||||| Sbjct: 176274 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 176215 Query: 428 tgcag 432 ||||| Sbjct: 176214 tgcag 176210 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 176812 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 176753 Query: 213 tatggaccaaagtggagataatgccatgccctcggctca 251 ||||||||||| || |||||| |||||||||| ||||| Sbjct: 176752 tatggaccaaactgaagataactccatgccctcagctca 176714 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 176425 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 176375 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 267 aatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaagg 322 |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| |||| Sbjct: 176558 aatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaagg 176503
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 368 agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 427 |||||||||||||||| | ||| |||||||||||||| || |||||||| |||||||||| Sbjct: 8212153 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 8212094 Query: 428 tgcag 432 ||||| Sbjct: 8212093 tgcag 8212089 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 8212691 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 8212632 Query: 213 tatggaccaaagtggagataatgccatgccctcggctca 251 ||||||||||| || |||||| |||||||||| ||||| Sbjct: 8212631 tatggaccaaactgaagataactccatgccctcagctca 8212593 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 8212304 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 8212254 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 267 aatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaagg 322 |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| |||| Sbjct: 8212437 aatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaagg 8212382 Score = 54.0 bits (27), Expect = 8e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggctct 362 |||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 27141068 aggatcatgatcgggcttactttgattctgctgattgggctct 27141110 Score = 48.1 bits (24), Expect = 0.049 Identities = 36/40 (90%) Strand = Plus / Plus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggc 359 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 11317114 aggaccatgagcgtgcctatttcgattccgccgattgggc 11317153
>dbj|AP001278.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0434D08 Length = 161266 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 368 agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 427 |||||||||||||||| | ||| |||||||||||||| || |||||||| |||||||||| Sbjct: 6084 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 6025 Query: 428 tgcag 432 ||||| Sbjct: 6024 tgcag 6020 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 6622 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 6563 Query: 213 tatggaccaaagtggagataatgccatgccctcggctca 251 ||||||||||| || |||||| |||||||||| ||||| Sbjct: 6562 tatggaccaaactgaagataactccatgccctcagctca 6524 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 6235 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 6185 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 267 aatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaagg 322 |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| |||| Sbjct: 6368 aatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaagg 6313
>dbj|AP002865.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0034C11 Length = 139399 Score = 81.8 bits (41), Expect = 4e-12 Identities = 59/65 (90%) Strand = Plus / Minus Query: 368 agtctggacagcaaggtgttgcaaaacccaaaggaccgctcgaggcactcaggccaaagt 427 |||||||||||||||| | ||| |||||||||||||| || |||||||| |||||||||| Sbjct: 129871 agtctggacagcaaggcgctgcgaaacccaaaggacctcttgaggcacttaggccaaagt 129812 Query: 428 tgcag 432 ||||| Sbjct: 129811 tgcag 129807 Score = 77.8 bits (39), Expect = 5e-11 Identities = 84/99 (84%) Strand = Plus / Minus Query: 153 catgtcggggatgaaggacgccaatgctgctgggcatgataacgttggaaattctgaacc 212 |||||||| ||||||||| ||||||||||||| | ||| | ||||||||| |||| || Sbjct: 130409 catgtcggatatgaaggacaccaatgctgctggacctgaaactgttggaaatcctgaccc 130350 Query: 213 tatggaccaaagtggagataatgccatgccctcggctca 251 ||||||||||| || |||||| |||||||||| ||||| Sbjct: 130349 tatggaccaaactgaagataactccatgccctcagctca 130311 Score = 69.9 bits (35), Expect = 1e-08 Identities = 47/51 (92%) Strand = Plus / Minus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| ||||||||||||||||||||||| |||||||| |||||| Sbjct: 130022 aaggatcatgaacgggcctattttgattctgctgactgggctctgggaaag 129972 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 267 aatcaaaaagaagtttggaggactaattcctaaaaagccaccgctcatctcaaagg 322 |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| |||| Sbjct: 130155 aatcaagaagaaatttggaggactaatgccaaaaaaaccaccactcatctcgaagg 130100
>emb|CT830476.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA002E16, full insert sequence Length = 790 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctct 362 ||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 246 aaggatcatgatcgggcttactttgattctgctgattgggctct 289
>ref|NM_001050328.1| Oryza sativa (japonica cultivar-group) Os01g0664500 (Os01g0664500) mRNA, partial cds Length = 979 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctct 362 ||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 435 aaggatcatgatcgggcttactttgattctgctgattgggctct 478
>ref|NM_125809.3| Arabidopsis thaliana unknown protein (AT5G64130) mRNA, complete cds Length = 650 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 252 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 311 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 312 gcatactttgactcagctgattgggctcttggaaag 347
>ref|NM_001037057.1| Arabidopsis thaliana unknown protein (AT5G64130) mRNA, complete cds Length = 707 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 308 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 367 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 368 gcatactttgactcagctgattgggctcttggaaag 403
>gb|AY097399.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, complete cds Length = 348 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 97 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 156 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 157 gcatactttgactcagctgattgggctcttggaaag 192
>gb|AY058135.1| Arabidopsis thaliana AT5g64130/MHJ24_11 mRNA, complete cds Length = 618 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 218 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 277 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 278 gcatactttgactcagctgattgggctcttggaaag 313
>gb|AY084225.1| Arabidopsis thaliana clone 10032 mRNA, complete sequence Length = 650 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 252 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 311 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 312 gcatactttgactcagctgattgggctcttggaaag 347
>emb|BX834062.1|CNS0A26V Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL93ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 574 Score = 56.0 bits (28), Expect = 2e-04 Identities = 79/96 (82%) Strand = Plus / Plus Query: 274 aagaagtttggaggactaattcctaaaaagccaccgctcatctcaaaggaccatgagcgg 333 ||||||| |||||| || || || || || ||||| ||||| || ||||| |||||||| Sbjct: 202 aagaagtatggagggctcatgccaaagaaaccacctctcatttccaaggatcatgagcga 261 Query: 334 gcctattttgattctgctgattgggctctcggaaag 369 || || ||||| || |||||||||||||| |||||| Sbjct: 262 gcatactttgactcagctgattgggctcttggaaag 297
>dbj|AK069846.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034B10, full insert sequence Length = 983 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctct 362 ||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 437 aaggatcatgatcgggcttactttgattctgctgattgggctct 480
>dbj|AK059427.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-E11, full insert sequence Length = 871 Score = 56.0 bits (28), Expect = 2e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctct 362 ||||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 325 aaggatcatgatcgggcttactttgattctgctgattgggctct 368
>gb|DQ244568.1| Zea mays clone 9211 mRNA sequence Length = 965 Score = 54.0 bits (27), Expect = 8e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 303 aaggatcatgaacgtgcttactttgattctgctgattgggctctaggaaag 353
>gb|BT016477.1| Zea mays clone Contig310 mRNA sequence Length = 1237 Score = 54.0 bits (27), Expect = 8e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 543 aaggatcatgaacgtgcttactttgattctgctgattgggctctaggaaag 593
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 54.0 bits (27), Expect = 8e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggctct 362 |||| ||||| ||||| || ||||||||||||||||||||||| Sbjct: 48746 aggatcatgatcgggcttactttgattctgctgattgggctct 48788
>gb|AY106845.1| Zea mays PCO147512 mRNA sequence Length = 1223 Score = 54.0 bits (27), Expect = 8e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 ||||| ||||| || || || ||||||||||||||||||||||| |||||| Sbjct: 557 aaggatcatgaacgtgcttactttgattctgctgattgggctctaggaaag 607
>emb|CT833516.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA047H15, full insert sequence Length = 889 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggct 360 ||||| |||||||| || || ||||||||||||||||||||| Sbjct: 247 aaggatcatgagcgagcttactttgattctgctgattgggct 288
>ref|NM_001062879.1| Oryza sativa (japonica cultivar-group) Os05g0566600 (Os05g0566600) mRNA, partial cds Length = 729 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggct 360 ||||| |||||||| || || ||||||||||||||||||||| Sbjct: 107 aaggatcatgagcgagcttactttgattctgctgattgggct 148
>emb|CT025840.2| Medicago truncatula chromosome 5 clone mth4-39c23, COMPLETE SEQUENCE Length = 243542 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 |||| ||||| || || |||||||||||||||||||||||| | |||||| Sbjct: 203391 aggatcatgaacgtgcttattttgattctgctgattgggctttgggaaag 203342
>dbj|AK058475.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C02, full insert sequence Length = 729 Score = 52.0 bits (26), Expect = 0.003 Identities = 38/42 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggct 360 ||||| |||||||| || || ||||||||||||||||||||| Sbjct: 107 aaggatcatgagcgagcttactttgattctgctgattgggct 148
>emb|CT829133.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN061I09, full insert sequence Length = 862 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 386 aaggaccatgagcgtgcctatttcgattccgccgattgggc 426
>emb|CT829132.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN057I10, full insert sequence Length = 682 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 335 aaggaccatgagcgtgcctatttcgattccgccgattgggc 375
>emb|CT829131.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN022I03, full insert sequence Length = 846 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 386 aaggaccatgagcgtgcctatttcgattccgccgattgggc 426
>emb|CT829130.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA058K15, full insert sequence Length = 736 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 389 aaggaccatgagcgtgcctatttcgattccgccgattgggc 429
>ref|NM_001049376.1| Oryza sativa (japonica cultivar-group) Os01g0305200 (Os01g0305200) mRNA, partial cds Length = 612 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 267 aaggaccatgagcgtgcctatttcgattccgccgattgggc 307
>gb|AC149634.8| Medicago truncatula clone mth2-5i17, complete sequence Length = 116601 Score = 50.1 bits (25), Expect = 0.012 Identities = 31/33 (93%) Strand = Plus / Plus Query: 337 tattttgattctgctgattgggctctcggaaag 369 |||||||||||||||||||||||| | |||||| Sbjct: 35534 tattttgattctgctgattgggctttgggaaag 35566
>gb|AC120986.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1781_H11, complete sequence Length = 204649 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Minus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggct 360 |||| |||||||| || || ||||||||||||||||||||| Sbjct: 66463 aggatcatgagcgagcttactttgattctgctgattgggct 66423
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Minus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggct 360 |||| |||||||| || || ||||||||||||||||||||| Sbjct: 27986298 aggatcatgagcgagcttactttgattctgctgattgggct 27986258
>dbj|AK062385.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-C01, full insert sequence Length = 612 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 |||||||||||||| |||||||| ||||| || |||||||| Sbjct: 267 aaggaccatgagcgtgcctatttcgattccgccgattgggc 307
>gb|AF061157.1|AF061157 Vernicia fordii negatively light-regulated protein mRNA, complete cds Length = 985 Score = 50.1 bits (25), Expect = 0.012 Identities = 37/41 (90%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgattgggc 359 ||||| |||||||| || | ||||||||||||||||||||| Sbjct: 346 aaggatcatgagcgtgcattttttgattctgctgattgggc 386
>ref|NM_001056413.1| Oryza sativa (japonica cultivar-group) Os03g0304800 (Os03g0304800) mRNA, complete cds Length = 627 Score = 48.1 bits (24), Expect = 0.049 Identities = 30/32 (93%) Strand = Plus / Plus Query: 316 tcaaaggaccatgagcgggcctattttgattc 347 ||||||||||||||||| ||||| |||||||| Sbjct: 184 tcaaaggaccatgagcgcgcctactttgattc 215
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0552C05 Length = 136586 Score = 48.1 bits (24), Expect = 0.049 Identities = 36/40 (90%) Strand = Plus / Plus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggc 359 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 30699 aggaccatgagcgtgcctatttcgattccgccgattgggc 30738
>dbj|AP002871.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0475H04 Length = 143337 Score = 48.1 bits (24), Expect = 0.049 Identities = 36/40 (90%) Strand = Plus / Plus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggc 359 ||||||||||||| |||||||| ||||| || |||||||| Sbjct: 104519 aggaccatgagcgtgcctatttcgattccgccgattgggc 104558
>dbj|AK062656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E12, full insert sequence Length = 627 Score = 48.1 bits (24), Expect = 0.049 Identities = 30/32 (93%) Strand = Plus / Plus Query: 316 tcaaaggaccatgagcgggcctattttgattc 347 ||||||||||||||||| ||||| |||||||| Sbjct: 184 tcaaaggaccatgagcgcgcctactttgattc 215
>gb|DQ244352.1| Zea mays clone 5374 mRNA sequence Length = 747 Score = 46.1 bits (23), Expect = 0.19 Identities = 32/35 (91%) Strand = Plus / Plus Query: 316 tcaaaggaccatgagcgggcctattttgattctgc 350 |||||||| || ||||| ||||||||||||||||| Sbjct: 253 tcaaaggatcaggagcgcgcctattttgattctgc 287
>gb|AC187996.1| Pan troglodytes chromosome 7 clone CH251-544A15, complete sequence Length = 178864 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Minus Query: 271 aaaaagaagtttggaggactaat 293 ||||||||||||||||||||||| Sbjct: 93017 aaaaagaagtttggaggactaat 92995
>gb|AC093726.3| Homo sapiens BAC clone RP11-5C23 from 7, complete sequence Length = 159041 Score = 46.1 bits (23), Expect = 0.19 Identities = 23/23 (100%) Strand = Plus / Plus Query: 271 aaaaagaagtttggaggactaat 293 ||||||||||||||||||||||| Sbjct: 114767 aaaaagaagtttggaggactaat 114789
>gb|DQ244330.1| Zea mays clone 4934 mRNA sequence Length = 539 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 488 acgaggatggagatggcgctgg 509 |||||||||||||||||||||| Sbjct: 297 acgaggatggagatggcgctgg 276
>gb|AC188810.3| Gallus gallus BAC clone CH261-17O3 from chromosome z, complete sequence Length = 203593 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Minus Query: 440 gacaacagcaacaacgttcaaggagc 465 |||||||||||||||||||| ||||| Sbjct: 194091 gacaacagcaacaacgttcagggagc 194066
>gb|AC190267.1| Gallus gallus chromosome Z clone CH261-44B21, complete sequence Length = 162998 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Plus Query: 440 gacaacagcaacaacgttcaaggagc 465 |||||||||||||||||||| ||||| Sbjct: 133219 gacaacagcaacaacgttcagggagc 133244
>gb|CP000431.1| Rhodococcus sp. RHA1, complete genome Length = 7804765 Score = 44.1 bits (22), Expect = 0.76 Identities = 25/26 (96%) Strand = Plus / Plus Query: 107 agccgacgcctccctcgccgccggcg 132 |||||||||| ||||||||||||||| Sbjct: 7375969 agccgacgccgccctcgccgccggcg 7375994 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 108 gccgacgcctccctcgccgcc 128 ||||||||||||||||||||| Sbjct: 5899727 gccgacgcctccctcgccgcc 5899707
>gb|AC019153.13| Mus musculus chromosome 2 clone RP23-286D16, complete sequence Length = 195068 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 10 atcgcagcagcagcagcggcca 31 |||||||||||||||||||||| Sbjct: 148632 atcgcagcagcagcagcggcca 148611
>dbj|BA000001.2| Pyrococcus horikoshii OT3 DNA, complete genome Length = 1738505 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Minus Query: 220 caaagtggagataatgccatgc 241 |||||||||||||||||||||| Sbjct: 1494497 caaagtggagataatgccatgc 1494476
>dbj|AB008266.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MHJ24 Length = 48622 Score = 44.1 bits (22), Expect = 0.76 Identities = 43/50 (86%) Strand = Plus / Minus Query: 320 aggaccatgagcgggcctattttgattctgctgattgggctctcggaaag 369 |||| |||||||| || || ||||| || |||||||||||||| |||||| Sbjct: 38437 aggatcatgagcgagcatactttgactcagctgattgggctcttggaaag 38388
>emb|BX004793.12| Mouse DNA sequence from clone RP23-188D9 on chromosome 2, complete sequence Length = 161514 Score = 44.1 bits (22), Expect = 0.76 Identities = 22/22 (100%) Strand = Plus / Plus Query: 10 atcgcagcagcagcagcggcca 31 |||||||||||||||||||||| Sbjct: 48436 atcgcagcagcagcagcggcca 48457
>ref|NM_001072790.1| Oryza sativa (japonica cultivar-group) Os12g0168900 (Os12g0168900) mRNA, complete cds Length = 1077 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 232 gatcgcagcagcagcagcggc 252
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 485 aaaacgaggatggagatggcgctgg 509 ||||||||||||||||||| ||||| Sbjct: 16571357 aaaacgaggatggagatggagctgg 16571333
>ref|XM_633933.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0185575) mRNA, complete cds Length = 318 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 339 ttttgattctgctgattgggc 359 ||||||||||||||||||||| Sbjct: 204 ttttgattctgctgattgggc 224
>gb|AC016019.4| Drosophila melanogaster clone BACR08P05, complete sequence Length = 192157 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 485 aaaacgaggatggagatggcgctgg 509 ||||||||||||||||||| ||||| Sbjct: 93801 aaaacgaggatggagatggagctgg 93825
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 13 gcagcagcagcagcggccaac 33 ||||||||||||||||||||| Sbjct: 220442 gcagcagcagcagcggccaac 220462
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 ttttgattctgctgattgggc 359 ||||||||||||||||||||| Sbjct: 6036176 ttttgattctgctgattgggc 6036156
>gb|AC093786.3| Homo sapiens BAC clone RP11-213A7 from 4, complete sequence Length = 175571 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 gccaccgctcatctcaaagga 323 ||||||||||||||||||||| Sbjct: 108121 gccaccgctcatctcaaagga 108141
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 3501051 gatcgcagcagcagcagcggc 3501031
>emb|AJ223492.1|TAIMA1 Triticum aestivum mRNA for monomeric alpha-amylase inhibitor (WAI-0.28) Length = 689 Score = 42.1 bits (21), Expect = 3.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 319 aaggaccatgagcgggcctattttgattctgctgatt 355 |||||||||||||| || | |||||||||||||||| Sbjct: 17 aaggaccatgagcgagcttgctttgattctgctgatt 53
>gb|AC009218.7|AC009218 Drosophila melanogaster, chromosome 2R, region 57B-57B, BAC clone BACR33D17, complete sequence Length = 156753 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 485 aaaacgaggatggagatggcgctgg 509 ||||||||||||||||||| ||||| Sbjct: 126893 aaaacgaggatggagatggagctgg 126869
>gb|AC007837.4|AC007837 Drosophila melanogaster, chromosome 2R, region 57B2-B3, BAC clone BACR04I07, complete sequence Length = 123647 Score = 42.1 bits (21), Expect = 3.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 485 aaaacgaggatggagatggcgctgg 509 ||||||||||||||||||| ||||| Sbjct: 93787 aaaacgaggatggagatggagctgg 93763
>emb|BX571724.9| Zebrafish DNA sequence from clone CH211-165B19 in linkage group 9, complete sequence Length = 174709 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggatccgatcgcagcagcagc 23 ||||||||||||||||||||| Sbjct: 93260 ggatccgatcgcagcagcagc 93240
>dbj|AK119725.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-H04, full insert sequence Length = 1000 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 155 gatcgcagcagcagcagcggc 175
>dbj|AK104011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-B07, full insert sequence Length = 1039 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 198 gatcgcagcagcagcagcggc 218
>dbj|AK071641.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106A11, full insert sequence Length = 1081 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 235 gatcgcagcagcagcagcggc 255
>dbj|AP005329.3| Homo sapiens genomic DNA, chromosome 18 clone:RP13-270P17, complete sequence Length = 178812 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 196 gttggaaattctgaacctatg 216 ||||||||||||||||||||| Sbjct: 52950 gttggaaattctgaacctatg 52930
>emb|AL954825.3|CNS08CD1 Oryza sativa chromosome 12, . BAC OJ2007_H06 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 103647 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 15979 gatcgcagcagcagcagcggc 15959
>emb|AL713902.2|CNS07YQ2 Oryza sativa chromosome 12, . BAC OJ1494_F10 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 116371 Score = 42.1 bits (21), Expect = 3.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 9 gatcgcagcagcagcagcggc 29 ||||||||||||||||||||| Sbjct: 30863 gatcgcagcagcagcagcggc 30883 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 136,542,722 Number of extensions: 7745025 Number of successful extensions: 352941 Number of sequences better than 10.0: 73 Number of HSP's gapped: 352936 Number of HSP's successfully gapped: 92 Length of query: 802 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 780 Effective length of database: 18,508,616,841 Effective search space: 14436721135980 Effective search space used: 14436721135980 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)