>Q6F2U9:SYK_ORYSJ Lysyl-tRNA synthetase - Oryza sativa subsp. japonica (Rice)|
          Length = 602
 Score = 62.0 bits (149), Expect = 1e-08
 Identities = 53/174 (30%), Positives = 67/174 (38%)
 Frame = -1

Query: 1924 LELAGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQ 1745
            L+  G++PYPHK    I++ADY+ KY                S      L+   +  CL 
Sbjct: 93   LKATGVNPYPHKFLANITVADYIEKYK---------------SMNVGDKLVD--VTECLA 135

Query: 1744 GRVMIKRVSSSKLFCYDLYGNGRRFRSWLGSGISCTGWIKMMKLAY*KHFFFHIVLFSAS 1565
            GR+M KR  SSKL  YDLYG G + +                                  
Sbjct: 136  GRIMTKRAQSSKLLFYDLYGGGEKVQ---------------------------------- 161

Query: 1564 FVFHHQNTWK*FLVSYLSISGSEMAKTEFHKFHNVLKRAHGWGCIVGIIGYLGK 1403
             VF    T             SE+   EF KFH+ LKR    G IVG+ GY GK
Sbjct: 162  -VFADART-------------SELEDNEFIKFHSTLKR----GDIVGVCGYPGK 197



 Score = 36.2 bits (82), Expect = 0.84
 Identities = 14/26 (53%), Positives = 22/26 (84%)
 Frame = -3

Query: 683 RGELSIFGRNLILLSPFLHMLPNREN 606
           RGELSIF + +++LSP LHM+P +++
Sbjct: 200 RGELSIFPKKIVVLSPCLHMMPRQKS 225

>Q43776:SYK_SOLLC Lysyl-tRNA synthetase - Solanum lycopersicum (Tomato) (Lycopersicon|
            esculentum)
          Length = 588

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 30/84 (35%), Positives = 46/84 (54%)
 Frame = -1

Query: 1924 LELAGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQ 1745
            L  +GI+PYPHK  +T+S+ +++++Y                  +  +   PE I + L 
Sbjct: 68   LRESGINPYPHKFFITMSIPEFISRYA-----------------HLNTGEFPEDIDMSLA 110

Query: 1744 GRVMIKRVSSSKLFCYDLYGNGRR 1673
            GRV+ KR SSSKL+ Y+L G G R
Sbjct: 111  GRVISKRASSSKLYFYELLGGGAR 134



 Score = 36.2 bits (82), Expect = 0.84
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -3

Query: 683 RGELSIFGRNLILLSPFLHMLPNR 612
           RGELSIF +  I+L+P LHMLP R
Sbjct: 175 RGELSIFAKPFIVLAPCLHMLPRR 198

>Q22099:SYK_CAEEL Lysyl-tRNA synthetase - Caenorhabditis elegans|
          Length = 572

 Score = 46.6 bits (109), Expect = 6e-04
 Identities = 28/79 (35%), Positives = 42/79 (53%)
 Frame = -1

Query: 1915 AGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQGRV 1736
            AG +P+PHK  VTISL D++TKY                +   +  ++ E++ +   GR+
Sbjct: 70   AGDNPFPHKFNVTISLTDFITKY----------------TPLEKEQVVEEIVSVA--GRI 111

Query: 1735 MIKRVSSSKLFCYDLYGNG 1679
              KR S SKL  YD++G G
Sbjct: 112  HSKRESGSKLVFYDIHGEG 130

>Q15046:SYK_HUMAN Lysyl-tRNA synthetase - Homo sapiens (Human)|
          Length = 597

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 30/82 (36%), Positives = 38/82 (46%)
 Frame = -1

Query: 1924 LELAGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQ 1745
            L++ G DPYPHK  V ISL D++ KY+                 + Q       I L + 
Sbjct: 87   LKVNGEDPYPHKFHVDISLTDFIQKYS-----------------HLQPGDHLTDITLKVA 129

Query: 1744 GRVMIKRVSSSKLFCYDLYGNG 1679
            GR+  KR S  KL  YDL G G
Sbjct: 130  GRIHAKRASGGKLIFYDLRGEG 151

>Q99MN1:SYK_MOUSE Lysyl-tRNA synthetase - Mus musculus (Mouse)|
          Length = 595

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 27/82 (32%), Positives = 37/82 (45%)
 Frame = -1

Query: 1924 LELAGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQ 1745
            L++ G DPYPHK  V ISL  ++ +Y+                 + Q       + L + 
Sbjct: 85   LKVTGEDPYPHKFHVDISLTQFIQEYS-----------------HLQPGDHLTDVTLKVA 127

Query: 1744 GRVMIKRVSSSKLFCYDLYGNG 1679
            GR+  KR S  KL  YDL G G
Sbjct: 128  GRIHAKRASGGKLIFYDLRGEG 149

>P37879:SYK_CRIGR Lysyl-tRNA synthetase - Cricetulus griseus (Chinese hamster)|
          Length = 597

 Score = 42.7 bits (99), Expect = 0.009
 Identities = 30/86 (34%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = -1

Query: 1924 LELAGIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLP----EMIC 1757
            L+++G DPYPHK  V ISL  ++ +Y                     S L P      I 
Sbjct: 87   LKVSGEDPYPHKFHVDISLTQFIQEY---------------------SQLQPGDHLTDIT 125

Query: 1756 LCLQGRVMIKRVSSSKLFCYDLYGNG 1679
            L + GR+  KR S  KL  YDL G G
Sbjct: 126  LKVAGRIHAKRASGGKLIFYDLRGEG 151

>Q9ZPI1:SYK_ARATH Lysyl-tRNA synthetase - Arabidopsis thaliana (Mouse-ear cress)|
          Length = 626

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = -1

Query: 1912 GIDPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQGRVM 1733
            G +PYPHK  V++S+  Y+  Y            E +                 L GR+M
Sbjct: 105  GENPYPHKFAVSMSIPKYIETYGSLNNGDHVENAEES-----------------LAGRIM 147

Query: 1732 IKRVSSSKLFCYDLYGN 1682
             KR SSSKLF YDL+G+
Sbjct: 148  SKRSSSSKLFFYDLHGD 164



 Score = 34.7 bits (78), Expect = 2.5
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -3

Query: 683 RGELSIFGRNLILLSPFLHMLPNR 612
           RGELSIF R+ ILLS  LHM+P +
Sbjct: 208 RGELSIFPRSFILLSHCLHMMPRK 231

>P15180:SYKC_YEAST Lysyl-tRNA synthetase, cytoplasmic - Saccharomyces cerevisiae|
            (Baker's yeast)
          Length = 591

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 25/76 (32%), Positives = 37/76 (48%)
 Frame = -1

Query: 1906 DPYPHKLKVTISLADYVTKYN*KLGWC*FFLCESNCS*YCQSFLLPEMICLCLQGRVMIK 1727
            +PYPHK  V+IS  +++ KY                +   +   LPE   + + GR+  K
Sbjct: 91   NPYPHKFHVSISNPEFLAKY----------------AHLKKGETLPEE-KVSIAGRIHAK 133

Query: 1726 RVSSSKLFCYDLYGNG 1679
            R S SKL  Y L+G+G
Sbjct: 134  RESGSKLKFYVLHGDG 149

>P48767:NAC1_FELCA Sodium/calcium exchanger 1 precursor - Felis silvestris catus (Cat)|
          Length = 970

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +1

Query: 1282 EKTEKNLQLLTSIGFSRIVRLSDREDIILNEELLNWTSTQIFLGILLYQQYTPTHAHASE 1461
            E+ EKN      IG  R+V +S+++ ++LN EL  +T T    G  LY Q      HA E
Sbjct: 611  EEYEKNKTFFLEIGEPRLVEMSEKKALLLN-ELGGFTIT----GKYLYGQPVFRKVHARE 665

Query: 1462 H 1464
            H
Sbjct: 666  H 666

>P23685:NAC1_CANFA Sodium/calcium exchanger 1 precursor - Canis familiaris (Dog)|
          Length = 970

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +1

Query: 1282 EKTEKNLQLLTSIGFSRIVRLSDREDIILNEELLNWTSTQIFLGILLYQQYTPTHAHASE 1461
            E+ EKN      IG  R+V +S+++ ++LN EL  +T T    G  LY Q      HA E
Sbjct: 611  EEYEKNKTFFLEIGEPRLVEMSEKKALLLN-ELGGFTIT----GKYLYGQPVFRKVHARE 665

Query: 1462 H 1464
            H
Sbjct: 666  H 666

>P48765:NAC1_BOVIN Sodium/calcium exchanger 1 precursor - Bos taurus (Bovine)|
          Length = 970

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 23/61 (37%), Positives = 32/61 (52%)
 Frame = +1

Query: 1282 EKTEKNLQLLTSIGFSRIVRLSDREDIILNEELLNWTSTQIFLGILLYQQYTPTHAHASE 1461
            E+ EKN      IG  R+V +S+++ ++LN EL  +T T    G  LY Q      HA E
Sbjct: 611  EEYEKNKTFFLEIGEPRLVEMSEKKALLLN-ELGGFTIT----GKYLYGQPVFRKVHARE 665

Query: 1462 H 1464
            H
Sbjct: 666  H 666


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 515,584,843
Number of extensions: 11093379
Number of successful extensions: 24207
Number of sequences better than 10.0: 11
Number of HSP's gapped: 24196
Number of HSP's successfully gapped: 20
Length of query: 1016
Length of database: 100,686,439
Length adjustment: 123
Effective length of query: 893
Effective length of database: 66,948,154
Effective search space: 59784701522
Effective search space used: 59784701522
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)