ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf89j18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK111880:Os06g0199800 561 e-160
2AK108564:Os06g0651900 30 3.6

>AK111880:Os06g0199800 |
          Length = 321
 Score =  561 bits (1447), Expect = e-160
 Identities = 266/306 (86%), Positives = 287/306 (93%)
 Frame = +1

Query: 127  MRNREILDAVXXXXXXXXXXXXXFIVLCYLLFRELRKFSFKLVYFLAVADMLCSLFTIMG 306
            +R+R++LDAV             FIVLCYLLFRELRKFSFKLVYFLAV+DM CSLFTIMG
Sbjct: 15   LRDRDVLDAVGTSAAALSLAGSSFIVLCYLLFRELRKFSFKLVYFLAVSDMFCSLFTIMG 74

Query: 307  GPANAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFGFIFHLYVWGTSL 486
            GP+NAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFG IFHLYVWGTSL
Sbjct: 75   GPSNAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFGSIFHLYVWGTSL 134

Query: 487  VTTVLRSIGSDYGRPGTWCWIQQGSMGKILHLITFYLPLWGAILYNGFTYYQVNRMLNNA 666
             TTVLRSIGSDYGRPGTWCWIQQGSMGK+LHL+TFYLPLWGAILYNG+TY+QVNRM+NNA
Sbjct: 135  ATTVLRSIGSDYGRPGTWCWIQQGSMGKVLHLVTFYLPLWGAILYNGYTYFQVNRMINNA 194

Query: 667  TRMAVGMSDRSSQSDVRADKKAFNRWGYYPLILIGSWAFATINRLYDFANPGHKIFWLSI 846
            TRMAVG+SDRS QSDVRADKKAFNRWGYYPLILIGSWAFATINR++DFANPGHKIFWLSI
Sbjct: 195  TRMAVGISDRSIQSDVRADKKAFNRWGYYPLILIGSWAFATINRVHDFANPGHKIFWLSI 254

Query: 847  LDIGFAGLMGLFNSIAYGLNSSVRRAIAERIDMYLPERIKRSLPTLSRLRSQQENELTSL 1026
            LD+GFAGLMGLFNSIAYGLNSSVRRAIAER+DMYLPER KRSLPTL+R +SQQENELTSL
Sbjct: 255  LDVGFAGLMGLFNSIAYGLNSSVRRAIAERLDMYLPERFKRSLPTLTRFKSQQENELTSL 314

Query: 1027 IVESNN 1044
            IV+++N
Sbjct: 315  IVDASN 320



to top

>AK108564:Os06g0651900 |
          Length = 78

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 1361 SCILALFHTVLQPFGVWFHLGFC 1429
            +C+  +F  VL P GV+F  GFC
Sbjct: 9    TCLETIFSVVLPPLGVFFRYGFC 31


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 40,690,102
Number of extensions: 899743
Number of successful extensions: 2022
Number of sequences better than 10.0: 2
Number of HSP's gapped: 2022
Number of HSP's successfully gapped: 2
Length of query: 518
Length of database: 15,399,855
Length adjustment: 105
Effective length of query: 413
Effective length of database: 11,195,550
Effective search space: 4623762150
Effective search space used: 4623762150
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top