Clone Name | FLbaf89j18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK111880:Os06g0199800 | 561 | e-160 | 2 | AK108564:Os06g0651900 | 30 | 3.6 |
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>AK111880:Os06g0199800 | Length = 321 Score = 561 bits (1447), Expect = e-160 Identities = 266/306 (86%), Positives = 287/306 (93%) Frame = +1 Query: 127 MRNREILDAVXXXXXXXXXXXXXFIVLCYLLFRELRKFSFKLVYFLAVADMLCSLFTIMG 306 +R+R++LDAV FIVLCYLLFRELRKFSFKLVYFLAV+DM CSLFTIMG Sbjct: 15 LRDRDVLDAVGTSAAALSLAGSSFIVLCYLLFRELRKFSFKLVYFLAVSDMFCSLFTIMG 74 Query: 307 GPANAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFGFIFHLYVWGTSL 486 GP+NAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFG IFHLYVWGTSL Sbjct: 75 GPSNAFYCFAHDYSAHFFCVASFLWTTTIAFTLHRTVVKHKTDVEEFGSIFHLYVWGTSL 134 Query: 487 VTTVLRSIGSDYGRPGTWCWIQQGSMGKILHLITFYLPLWGAILYNGFTYYQVNRMLNNA 666 TTVLRSIGSDYGRPGTWCWIQQGSMGK+LHL+TFYLPLWGAILYNG+TY+QVNRM+NNA Sbjct: 135 ATTVLRSIGSDYGRPGTWCWIQQGSMGKVLHLVTFYLPLWGAILYNGYTYFQVNRMINNA 194 Query: 667 TRMAVGMSDRSSQSDVRADKKAFNRWGYYPLILIGSWAFATINRLYDFANPGHKIFWLSI 846 TRMAVG+SDRS QSDVRADKKAFNRWGYYPLILIGSWAFATINR++DFANPGHKIFWLSI Sbjct: 195 TRMAVGISDRSIQSDVRADKKAFNRWGYYPLILIGSWAFATINRVHDFANPGHKIFWLSI 254 Query: 847 LDIGFAGLMGLFNSIAYGLNSSVRRAIAERIDMYLPERIKRSLPTLSRLRSQQENELTSL 1026 LD+GFAGLMGLFNSIAYGLNSSVRRAIAER+DMYLPER KRSLPTL+R +SQQENELTSL Sbjct: 255 LDVGFAGLMGLFNSIAYGLNSSVRRAIAERLDMYLPERFKRSLPTLTRFKSQQENELTSL 314 Query: 1027 IVESNN 1044 IV+++N Sbjct: 315 IVDASN 320
>AK108564:Os06g0651900 | Length = 78 Score = 30.4 bits (67), Expect = 3.6 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 1361 SCILALFHTVLQPFGVWFHLGFC 1429 +C+ +F VL P GV+F GFC Sbjct: 9 TCLETIFSVVLPPLGVFFRYGFC 31 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 40,690,102 Number of extensions: 899743 Number of successful extensions: 2022 Number of sequences better than 10.0: 2 Number of HSP's gapped: 2022 Number of HSP's successfully gapped: 2 Length of query: 518 Length of database: 15,399,855 Length adjustment: 105 Effective length of query: 413 Effective length of database: 11,195,550 Effective search space: 4623762150 Effective search space used: 4623762150 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)