>P12301:PSBQ_SPIOL Oxygen-evolving enhancer protein 3, chloroplast precursor -|
           Spinacia oleracea (Spinach)
          Length = 232
 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 35/102 (34%), Positives = 62/102 (60%)
 Frame = +2

Query: 311 EAEAVVRTHARNLVRVKQYIDARSWRELQTALRASAANLKQDLYAIIQARPPGQRPELRR 490
           EA    +  A  ++ VKQ+ID ++W  LQ  LR  A+ L+ DL  +I A+P  ++  L+ 
Sbjct: 130 EAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQE 189

Query: 491 LYSDLFNNVTRLDYAARDKDELQVQECYGNIVAAIDQIFARI 616
           L S LF+++  LD+AA+ K   + ++ YG  V+ I+++ A++
Sbjct: 190 LTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKL 231

>Q41932:PSBQ2_ARATH Oxygen-evolving enhancer protein 3-2, chloroplast precursor -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 230

 Score = 74.7 bits (182), Expect = 4e-13
 Identities = 42/131 (32%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
 Frame = +2

Query: 236 LPPTAGIAGAFDLDL----RITIPEQSSEEAEAVVRTHARNLVRVKQYIDARSWRELQTA 403
           LP T     A D  L    R  I   S  EA A  +  A+ ++ VK +ID ++W  +Q  
Sbjct: 99  LPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQND 158

Query: 404 LRASAANLKQDLYAIIQARPPGQRPELRRLYSDLFNNVTRLDYAARDKDELQVQECYGNI 583
           LR  A+ L+ DL  +I A+P  ++  L+ L + LF  +  LDYAAR K     ++ Y   
Sbjct: 159 LRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSET 218

Query: 584 VAAIDQIFARI 616
           V++++ + A++
Sbjct: 219 VSSLNNVLAKL 229

>Q41643:PSBQ_VOLCA Oxygen-evolving enhancer protein 3, chloroplast precursor - Volvox|
           carteri
          Length = 202

 Score = 38.1 bits (87), Expect = 0.045
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
 Frame = +2

Query: 263 AFDLDLRITIPE---QSSEEAEAVVRTHARNLVRV----KQYIDARSWRELQTALRASAA 421
           A DLDLR +  +   Q+    +A ++    +  R+    + +I    W E +  LR    
Sbjct: 76  ARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKKNYWTEAREQLRRQVG 135

Query: 422 NLKQDLYAIIQARP-PGQRPELRRLYSDLFNNVTRLDYAARDKDELQVQECYGNIVAAID 598
            L+ DL  +  A+    ++ +   L  +    V  LD+A R+KDE    +      +A+D
Sbjct: 136 TLRFDLNTLASAKGVKAEKKKALELKKEFIQKVEDLDFALREKDETSALKKLEAAKSALD 195

Query: 599 QIFARI 616
            + A +
Sbjct: 196 SVLAYV 201

>Q9Y606:TRUA_HUMAN tRNA pseudouridine synthase A - Homo sapiens (Human)|
          Length = 427

 Score = 35.8 bits (81), Expect = 0.22
 Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 5/81 (6%)
 Frame = +3

Query: 525 WTMRPETRMSSRCRNATATLWPPLIRFLPESRSFCTGYIGGERL-DRARHPDLRLDTG-- 695
           WT+R   R S   R A     PP     P+ R  C+G  GG+R+ +   HP  +L +G  
Sbjct: 15  WTLRLGPRPSCSPRMAGNAEPPPAGAACPQDRRSCSGRAGGDRVWEDGEHPAKKLKSGGD 74

Query: 696 --RRSKQ*PAKRHFFCYVASS 752
             RR K  P KR     +A S
Sbjct: 75  EERREK--PPKRKIVLLMAYS 93

>P12852:PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chloroplast precursor -|
           Chlamydomonas reinhardtii
          Length = 199

 Score = 35.4 bits (80), Expect = 0.29
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
 Frame = +2

Query: 263 AFDLDLRITIPE-------QSSEEAEAVVRTHARNLVRVKQYIDARSWRELQTALRASAA 421
           A DLDL   + E          E  + V  + AR    +  +I    W E +  LR    
Sbjct: 74  ARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQVG 133

Query: 422 NLKQDLYAIIQARPPGQRPELRRLYSDLFNNVTRLDYAARDKDELQVQECYGNIVAAIDQ 601
            L+ DL  +   +    +     L  +    V  LD+A R+KD+    +      A +D 
Sbjct: 134 TLRFDLNTLASTKEKEAKKAALGLRKEFIQAVEDLDFALREKDQASAAKKLEITKAKLDS 193

Query: 602 IFARI 616
           + A +
Sbjct: 194 VLAAV 198

>Q5JUK3:KCNT1_HUMAN Potassium channel subfamily T member 1 - Homo sapiens (Human)|
          Length = 1230

 Score = 31.6 bits (70), Expect = 4.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 28   HHGNGTAARHPITRRKPLPLS*QTHQKAPEQ 120
            H G G  A HP+ RRK L  + +  +KAP+Q
Sbjct: 1067 HTGGGDPAEHPLLRRKSLQWARRLSRKAPKQ 1097

>P81712:ICI1_CANLI Subtilisin inhibitor CLSI-I - Canavalia lineata|
          Length = 65

 Score = 31.6 bits (70), Expect = 4.2
 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
 Frame = +2

Query: 380 SWRELQTALRASAANLKQDLYAI-IQARPPGQ------RPELRRLYSDLFNNVTR 523
           SW EL       A  +K+++  + IQ  PPG       +P+  RLY D  N VTR
Sbjct: 6   SWPELVGVTAEEAEKIKEEMSGVEIQVVPPGSFVTADYKPQRVRLYVDESNKVTR 60

>P30117:YKR4_EBV Hypothetical protein BKRF4 - Epstein-Barr virus (strain B95-8)|
           (HHV-4) (Human herpesvirus 4)
          Length = 217

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 18/49 (36%), Positives = 21/49 (42%)
 Frame = +1

Query: 1   QDSTKVERLHHGNGTAARHPITRRKPLPLS*QTHQKAPEQWPPPPAGTN 147
           Q STK +  H       R P  RR P P S  T+ K   +  PP  G N
Sbjct: 162 QQSTKDKGPHRPTRPVLRGPAPRRPPPPSSPNTYNKHMMETTPPIKGNN 210

>Q810B7:SLIK5_MOUSE SLIT and NTRK-like protein 5 precursor - Mus musculus (Mouse)|
          Length = 957

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 17/59 (28%), Positives = 29/59 (49%)
 Frame = -1

Query: 700 LLPVSKRKSGCLALSNLSPPIYPVQKLRDSGKNLINGGHNVAVAFLHLELILVSGRIVQ 524
           +L VS    G ++LS +SPP +P+  L  SG  L     N  V +    ++ +   ++Q
Sbjct: 60  ILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLSRLYPNEFVNYTGASILHLGSNVIQ 118

>O94991:SLIK5_HUMAN SLIT and NTRK-like protein 5 precursor - Homo sapiens (Human)|
          Length = 958

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 16/36 (44%), Positives = 23/36 (63%)
 Frame = -1

Query: 700 LLPVSKRKSGCLALSNLSPPIYPVQKLRDSGKNLIN 593
           +L VS    G ++LS +SPP +P+  L  SG NL+N
Sbjct: 60  ILTVSCENRGIISLSEISPPRFPIYHLLLSG-NLLN 94

>Q211G7:RL15_RHOPB 50S ribosomal protein L15 - Rhodopseudomonas palustris (strain|
           BisB18)
          Length = 162

 Score = 30.4 bits (67), Expect = 9.4
 Identities = 16/31 (51%), Positives = 19/31 (61%)
 Frame = +2

Query: 467 GQRPELRRLYSDLFNNVTRLDYAARDKDELQ 559
           GQ P  RRL    FNN+ RLD+A  + D LQ
Sbjct: 52  GQMPLHRRLPKRGFNNIFRLDFAEINLDRLQ 82


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 126,473,505
Number of extensions: 2454242
Number of successful extensions: 8017
Number of sequences better than 10.0: 11
Number of HSP's gapped: 7996
Number of HSP's successfully gapped: 11
Length of query: 285
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 173
Effective length of database: 69,965,399
Effective search space: 12104014027
Effective search space used: 12104014027
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)