ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92k15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CT829567.1| Oryza sativa (indica cultivar-group) cDNA clone:... 262 3e-66
2ref|NM_001058213.1| Oryza sativa (japonica cultivar-group) Os03g... 262 3e-66
3gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genom... 262 3e-66
4gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genom... 262 3e-66
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 262 3e-66
6dbj|AK067585.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 3e-66
7dbj|AK060419.1| Oryza sativa (japonica cultivar-group) cDNA clon... 262 3e-66
8gb|AY107236.1| Zea mays PCO067763 mRNA sequence 133 2e-27
9gb|AY107485.1| Zea mays PCO090409 mRNA sequence 54 0.001
10ref|NM_001071441.1| Oryza sativa (japonica cultivar-group) Os10g... 50 0.023
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.023
12gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 50 0.023
13dbj|AK102471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.023
14dbj|AK073407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.023
15dbj|AK064407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.023
16gb|CP000487.1| Campylobacter fetus subsp. fetus 82-40, complete ... 42 5.6
17ref|XM_417647.2| PREDICTED: Gallus gallus similar to AGPA3119 (L... 42 5.6
18gb|AC145800.3| Xenopus tropicalis clone CH216-60E16, complete se... 42 5.6
19gb|AC157790.11| Mus musculus chromosome 7, clone RP24-151M10, co... 42 5.6
20gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, co... 42 5.6
21gb|AF201370.1| Homo sapiens MDM2-a1 mRNA, complete cds 42 5.6
22gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosom... 42 5.6
23gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, comp... 42 5.6
24gb|AC110092.4| Mus musculus BAC clone RP24-94E17 from chromosome... 42 5.6
25gb|AC146761.6| Pan troglodytes clone ptb-54f16, complete sequence 42 5.6
26gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, co... 42 5.6
27gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's H... 42 5.6
28gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome ... 42 5.6
29gb|AC156953.9| Mus musculus 6 BAC RP24-568F14 (Roswell Park Canc... 42 5.6
30ref|XM_387246.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 42 5.6
31gb|DQ092766.1| HIV-2 isolate HIV-2B 310319k2 nef protein (nef) g... 42 5.6
32gb|AE014176.1| Mus musculus piebald deletion region section 4 of... 42 5.6
33ref|XM_746325.1| Aspergillus fumigatus Af293 cytochrome P450 mon... 42 5.6
34gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, co... 42 5.6
35gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, co... 42 5.6
36gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, co... 42 5.6
37gb|AC087336.5| Mus musculus chromosome 6, clone RP23-446O7, comp... 42 5.6
38emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 i... 42 5.6
39emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in... 42 5.6
40emb|CR388046.14| Zebrafish DNA sequence from clone DKEY-50E6 in ... 42 5.6
41ref|NM_001017509.1| Rattus norvegicus similar to cathepsin R (MG... 42 5.6
42gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occlu... 42 5.6
43gb|AC006962.2|AC006962 Homo sapiens PAC clone RP6-52J4 from Xq23... 42 5.6
44emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11... 42 5.6
45emb|AL929307.8| Zebrafish DNA sequence from clone CH211-85A24 in... 42 5.6
46gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 42 5.6 
>emb|CT829567.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA051F10, full
           insert sequence
          Length = 836
 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                       
Query: 3   agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
           ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 177 agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 236

                                                                       
Query: 63  actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
           |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 237 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 296

                                                                       
Query: 123 acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
           || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 297 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 356

                                                                       
Query: 183 ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
           |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 357 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 416

                           
Query: 243 aacccatgtgaatcag 258
           ||||||||||||||||
Sbjct: 417 aacccatgtgaatcag 432
to top
>ref|NM_001058213.1| Oryza sativa (japonica cultivar-group) Os03g0812200 (Os03g0812200)
            mRNA, complete cds
          Length = 1919

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
            ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 974  agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 1033

                                                                        
Query: 63   actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
            |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 1034 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 1093

                                                                        
Query: 123  acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
            || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 1094 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 1153

                                                                        
Query: 183  ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
            |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 1154 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 1213

                            
Query: 243  aacccatgtgaatcag 258
            ||||||||||||||||
Sbjct: 1214 aacccatgtgaatcag 1229
to top
>gb|AC135594.4| Oryza sativa chromosome 3 BAC OSJNBa0024F18 genomic sequence, complete
              sequence
          Length = 159795

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Minus

                                                                          
Query: 3      agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
              ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 144150 agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 144091

                                                                          
Query: 63     actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
              |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 144090 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 144031

                                                                          
Query: 123    acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
              || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 144030 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 143971

                                                                          
Query: 183    ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
              |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 143970 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 143911

                              
Query: 243    aacccatgtgaatcag 258
              ||||||||||||||||
Sbjct: 143910 aacccatgtgaatcag 143895
to top
>gb|AC137507.3| Oryza sativa chromosome 3 BAC OSJNBb0033J23 genomic sequence, complete
              sequence
          Length = 126862

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                          
Query: 3      agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
              ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 100459 agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 100518

                                                                          
Query: 63     actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
              |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 100519 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 100578

                                                                          
Query: 123    acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
              || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 100579 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 100638

                                                                          
Query: 183    ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
              |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 100639 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 100698

                              
Query: 243    aacccatgtgaatcag 258
              ||||||||||||||||
Sbjct: 100699 aacccatgtgaatcag 100714
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                            
Query: 3        agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
                ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 33819562 agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 33819621

                                                                            
Query: 63       actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
                |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 33819622 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 33819681

                                                                            
Query: 123      acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
                || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 33819682 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 33819741

                                                                            
Query: 183      ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
                |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 33819742 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 33819801

                                
Query: 243      aacccatgtgaatcag 258
                ||||||||||||||||
Sbjct: 33819802 aacccatgtgaatcag 33819817
to top
>dbj|AK067585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013111A16, full
            insert sequence
          Length = 1920

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
            ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 975  agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 1034

                                                                        
Query: 63   actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
            |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 1035 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 1094

                                                                        
Query: 123  acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
            || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 1095 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 1154

                                                                        
Query: 183  ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
            |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 1155 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 1214

                            
Query: 243  aacccatgtgaatcag 258
            ||||||||||||||||
Sbjct: 1215 aacccatgtgaatcag 1230
to top
>dbj|AK060419.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F10, full
            insert sequence
          Length = 1590

 Score =  262 bits (132), Expect = 3e-66
 Identities = 225/256 (87%)
 Strand = Plus / Plus

                                                                        
Query: 3    agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
            ||||| || ||||||||||| || || ||||| ||||||||| |||| | ||||||||||
Sbjct: 945  agtgatcttaatcgttctggtacaccacctgccaagaaggaagctgtagaagcattgcca 1004

                                                                        
Query: 63   actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
            |||||||||||||||||||| || |||||| | |||||||||||||| || |||||||||
Sbjct: 1005 actgtgaacatccaggaagtgttaggctgttctgtctgtcttgaggatttcgaaatgggg 1064

                                                                        
Query: 123  acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
            || || ||||||||||||||||| ||||| ||||| |||||| | ||||| |||||||||
Sbjct: 1065 acagaagcgaaggagatgccttgtcaacataagttccactcccagtgcatacttccatgg 1124

                                                                        
Query: 183  ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
            |||||||| ||||||||||||||||| ||| | |||||| ||||||| |||||||| || 
Sbjct: 1125 ctggagctacacagttcttgcccaatctgtaggtttcagttgcctaccgaggagtcgaaa 1184

                            
Query: 243  aacccatgtgaatcag 258
            ||||||||||||||||
Sbjct: 1185 aacccatgtgaatcag 1200
to top
>gb|AY107236.1| Zea mays PCO067763 mRNA sequence
          Length = 1624

 Score =  133 bits (67), Expect = 2e-27
 Identities = 199/243 (81%)
 Strand = Plus / Plus

                                                                        
Query: 3    agtgacctgaatcgttctgggacgccgcctgctaagaaggaatctgtggcagcattgcca 62
            |||||||| | ||||||||| || |||||||| ||||||||| | || || ||  | |||
Sbjct: 838  agtgacctcagtcgttctggcacaccgcctgccaagaaggaagcagtcgccgcgctacca 897

                                                                        
Query: 63   actgtgaacatccaggaagtattgggctgtacagtctgtcttgaggagtttgaaatgggg 122
            || ||||||||| ||||||  ||||||||| |||||||||||||||| || || ||||| 
Sbjct: 898  accgtgaacatcgaggaagcgttgggctgttcagtctgtcttgaggatttcgagatggga 957

                                                                        
Query: 123  acggaggcgaaggagatgccttgccaacacaagtttcactccaattgcatccttccatgg 182
               || |||||| ||||||| || || || ||||| |||||  | ||||| || || |||
Sbjct: 958  ggagaagcgaagcagatgccctgtcagcataagttccactcgcactgcatactcccgtgg 1017

                                                                        
Query: 183  ctggagctccacagttcttgcccaatttgtcgatttcagctgcctactgaggagtcaaag 242
            |||||||||||||| ||||||||||| || || |||||| |||||||||||||| | |||
Sbjct: 1018 ctggagctccacagctcttgcccaatctgccggtttcagttgcctactgaggagacgaag 1077

               
Query: 243  aac 245
            |||
Sbjct: 1078 aac 1080
to top
>gb|AY107485.1| Zea mays PCO090409 mRNA sequence
          Length = 615

 Score = 54.0 bits (27), Expect = 0.001
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 167 ttgcatccttccatggctggagctccacagttcttgccc 205
           ||||||||| |||||||| ||||||||||| ||||||||
Sbjct: 274 ttgcatcctgccatggcttgagctccacagctcttgccc 312
to top
>ref|NM_001071441.1| Oryza sativa (japonica cultivar-group) Os10g0487400 (Os10g0487400)
           mRNA, partial cds
          Length = 1216

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
           |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 616 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 675

                
Query: 228 actga 232
           |||||
Sbjct: 676 actga 680
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                            
Query: 168      tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
                |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 17926350 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 17926291

                     
Query: 228      actga 232
                |||||
Sbjct: 17926290 actga 17926286
to top
>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence,
            complete sequence
          Length = 148816

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                        
Query: 168  tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
            |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 5691 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 5750

                 
Query: 228  actga 232
            |||||
Sbjct: 5751 actga 5755
to top
>dbj|AK102471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094G14, full
           insert sequence
          Length = 1439

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
           |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 828 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 887

                
Query: 228 actga 232
           |||||
Sbjct: 888 actga 892
to top
>dbj|AK073407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041L15, full
           insert sequence
          Length = 1217

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
           |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 617 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 676

                
Query: 228 actga 232
           |||||
Sbjct: 677 actga 681
to top
>dbj|AK064407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H11, full
           insert sequence
          Length = 1474

 Score = 50.1 bits (25), Expect = 0.023
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 168 tgcatccttccatggctggagctccacagttcttgcccaatttgtcgatttcagctgcct 227
           |||||| | ||||||||||| ||||||| ||| ||||| || || || ||| ||||||||
Sbjct: 858 tgcatcatgccatggctggatctccacaattcatgccccatatgccgctttgagctgcct 917

                
Query: 228 actga 232
           |||||
Sbjct: 918 actga 922
to top
>gb|CP000487.1| Campylobacter fetus subsp. fetus 82-40, complete genome
          Length = 1773615

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 1030    gaagttgttgttcctactgaa 1050
               |||||||||||||||||||||
Sbjct: 1313434 gaagttgttgttcctactgaa 1313414
to top
>ref|XM_417647.2| PREDICTED: Gallus gallus similar to AGPA3119 (LOC419492), mRNA
          Length = 1894

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 cttccatggctggagctccac 194
           |||||||||||||||||||||
Sbjct: 280 cttccatggctggagctccac 260
to top
>gb|AC145800.3| Xenopus tropicalis clone CH216-60E16, complete sequence
          Length = 159665

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 642    tacagtatgcgtgtgtgtgtg 662
              |||||||||||||||||||||
Sbjct: 107765 tacagtatgcgtgtgtgtgtg 107745
to top
>gb|AC157790.11| Mus musculus chromosome 7, clone RP24-151M10, complete sequence
          Length = 168779

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 649    tgcgtgtgtgtgtgaaataaa 669
              |||||||||||||||||||||
Sbjct: 128201 tgcgtgtgtgtgtgaaataaa 128221
to top
>gb|AC108424.14| Mus musculus chromosome 7, clone RP23-105A10, complete sequence
          Length = 198191

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 649   tgcgtgtgtgtgtgaaataaa 669
             |||||||||||||||||||||
Sbjct: 33329 tgcgtgtgtgtgtgaaataaa 33349
to top
>gb|AF201370.1| Homo sapiens MDM2-a1 mRNA, complete cds
          Length = 798

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 398 gtcctcatcatcttcatctga 418
           |||||||||||||||||||||
Sbjct: 225 gtcctcatcatcttcatctga 205
to top
>gb|AC134336.2| Mus musculus BAC clone RP23-134A10 from chromosome 6, complete sequence
          Length = 204120

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1192   tggttgttatttcttgttatt 1212
              |||||||||||||||||||||
Sbjct: 196876 tggttgttatttcttgttatt 196856
to top
>gb|AC099631.6| Mus musculus chromosome 1, clone RP24-93F22, complete sequence
          Length = 185048

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1192   tggttgttatttcttgttatt 1212
              |||||||||||||||||||||
Sbjct: 164084 tggttgttatttcttgttatt 164064
to top
>gb|AC110092.4| Mus musculus BAC clone RP24-94E17 from chromosome 14, complete sequence
          Length = 184368

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 642    tacagtatgcgtgtgtgtgtg 662
              |||||||||||||||||||||
Sbjct: 114799 tacagtatgcgtgtgtgtgtg 114819
to top
>gb|AC146761.6| Pan troglodytes clone ptb-54f16, complete sequence
          Length = 153907

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 642   tacagtatgcgtgtgtgtgtg 662
             |||||||||||||||||||||
Sbjct: 36666 tacagtatgcgtgtgtgtgtg 36646
to top
>gb|AC099589.12| Mus musculus chromosome 1, clone RP23-337A19, complete sequence
          Length = 264062

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1192   tggttgttatttcttgttatt 1212
              |||||||||||||||||||||
Sbjct: 207005 tggttgttatttcttgttatt 207025
to top
>gb|AC095326.9| Rattus norvegicus 1 BAC CH230-89E14 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 219914

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1159  ctgattttaaatcccactcaa 1179
             |||||||||||||||||||||
Sbjct: 28817 ctgattttaaatcccactcaa 28837
to top
>gb|AC129190.3| Mus musculus BAC clone RP24-79D2 from chromosome 1, complete sequence
          Length = 236342

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1192   tggttgttatttcttgttatt 1212
              |||||||||||||||||||||
Sbjct: 183744 tggttgttatttcttgttatt 183764
to top
>gb|AC156953.9| Mus musculus 6 BAC RP24-568F14 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173297

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1407  tgtaaatgtagtacttcctct 1427
             |||||||||||||||||||||
Sbjct: 27332 tgtaaatgtagtacttcctct 27312
to top
>ref|XM_387246.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07070.1)
           partial mRNA
          Length = 1173

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 395 tgcgtcctcatcatcttcatc 415
           |||||||||||||||||||||
Sbjct: 607 tgcgtcctcatcatcttcatc 627
to top
>gb|DQ092766.1| HIV-2 isolate HIV-2B 310319k2 nef protein (nef) gene, complete cds
          Length = 717

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 397 cgtcctcatcatcttcatctg 417
           |||||||||||||||||||||
Sbjct: 232 cgtcctcatcatcttcatctg 212
to top
>gb|AE014176.1| Mus musculus piebald deletion region section 4 of 11 of the complete
              sequence
          Length = 395229

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 642    tacagtatgcgtgtgtgtgtg 662
              |||||||||||||||||||||
Sbjct: 296148 tacagtatgcgtgtgtgtgtg 296128
to top
>ref|XM_746325.1| Aspergillus fumigatus Af293 cytochrome P450 monooxygenase
            (Afu4g14140) partial mRNA
          Length = 1407

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 760  tggagcatctgtttggcaaag 780
            |||||||||||||||||||||
Sbjct: 1265 tggagcatctgtttggcaaag 1245
to top
>gb|AC069382.9| Homo sapiens chromosome 15, clone RP11-360J18, complete sequence
          Length = 193681

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1303  tggtatatttgtgttttgcag 1323
             |||||||||||||||||||||
Sbjct: 47622 tggtatatttgtgttttgcag 47602
to top
>gb|AC010864.11| Homo sapiens chromosome 10 clone RP11-351D16, complete sequence
          Length = 205794

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 632    ccgacgtgtttacagtatgcgtgtgtgtg 660
              |||||||||||| ||||| ||||||||||
Sbjct: 136608 ccgacgtgtttaaagtatccgtgtgtgtg 136580
to top
>gb|AC022613.13| Homo sapiens chromosome 15, clone RP11-680F8, complete sequence
          Length = 188117

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1303   tggtatatttgtgttttgcag 1323
              |||||||||||||||||||||
Sbjct: 154275 tggtatatttgtgttttgcag 154255
to top
>gb|AC087336.5| Mus musculus chromosome 6, clone RP23-446O7, complete sequence
          Length = 181773

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1192   tggttgttatttcttgttatt 1212
              |||||||||||||||||||||
Sbjct: 115244 tggttgttatttcttgttatt 115264
to top
>emb|CR388027.14| Zebrafish DNA sequence from clone DKEY-181O16 in linkage group 7,
             complete sequence
          Length = 50326

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 642   tacagtatgcgtgtgtgtgtg 662
             |||||||||||||||||||||
Sbjct: 45534 tacagtatgcgtgtgtgtgtg 45514
to top
>emb|BX901933.15| Zebrafish DNA sequence from clone DKEY-114H6 in linkage group 22,
             complete sequence
          Length = 42656

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 652   gtgtgtgtgtgaaataaaggt 672
             |||||||||||||||||||||
Sbjct: 10859 gtgtgtgtgtgaaataaaggt 10879
to top
>emb|CR388046.14| Zebrafish DNA sequence from clone DKEY-50E6 in linkage group 7,
             complete sequence
          Length = 211210

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 642   tacagtatgcgtgtgtgtgtg 662
             |||||||||||||||||||||
Sbjct: 94561 tacagtatgcgtgtgtgtgtg 94581
to top
>ref|NM_001017509.1| Rattus norvegicus similar to cathepsin R (MGC114246), mRNA
 gb|BC091563.1| Rattus norvegicus similar to cathepsin R, mRNA (cDNA clone MGC:114246
            IMAGE:7461240), complete cds
          Length = 1364

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1297 tttgcttggtatatttgtgtt 1317
            |||||||||||||||||||||
Sbjct: 1174 tttgcttggtatatttgtgtt 1194
to top
>gb|DQ015919.1| Homo sapiens tight junction protein 1 (zona occludens 1) (TJP1) gene,
             complete cds
          Length = 125625

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1303  tggtatatttgtgttttgcag 1323
             |||||||||||||||||||||
Sbjct: 25024 tggtatatttgtgttttgcag 25044
to top
>gb|AC006962.2|AC006962 Homo sapiens PAC clone RP6-52J4 from Xq23, complete sequence
          Length = 64965

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 642   tacagtatgcgtgtgtgtgtg 662
             |||||||||||||||||||||
Sbjct: 61669 tacagtatgcgtgtgtgtgtg 61649
to top
>emb|CT027660.1| Medicago truncatula chromosome 5 clone mth4-7a11, COMPLETE SEQUENCE
          Length = 107624

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1021   ttcccctttgaagttgttgtt 1041
              |||||||||||||||||||||
Sbjct: 103964 ttcccctttgaagttgttgtt 103944
to top
>emb|AL929307.8| Zebrafish DNA sequence from clone CH211-85A24 in linkage group 20,
             complete sequence
          Length = 176518

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 642   tacagtatgcgtgtgtgtgtg 662
             |||||||||||||||||||||
Sbjct: 13037 tacagtatgcgtgtgtgtgtg 13017
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 42.1 bits (21), Expect = 5.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 759     ctggagcatctgtttggcaaa 779
               |||||||||||||||||||||
Sbjct: 1318272 ctggagcatctgtttggcaaa 1318252


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 282,733,005
Number of extensions: 24326096
Number of successful extensions: 380560
Number of sequences better than 10.0: 46
Number of HSP's gapped: 380559
Number of HSP's successfully gapped: 46
Length of query: 1471
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1448
Effective length of database: 18,503,978,556
Effective search space: 26793760949088
Effective search space used: 26793760949088
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
to top