ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89i18 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g04290:12006.t00318:unspliced-genomic 40S ribosomal protein S20, putative, expressed| Length = 1995 Score = 108 bits (231), Expect(3) = 2e-61 Identities = 47/48 (97%), Positives = 47/48 (97%) Frame = +3 / +1 Query: 321 GTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ* 464 GTNTWDRFEMRVHKRVIDLVSS DVVKQITSITIEPGVEVEVTISDQ* Sbjct: 1612 GTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTISDQ* 1755 Score = 88.1 bits (186), Expect(3) = 2e-61 Identities = 35/39 (89%), Positives = 37/39 (94%) Frame = +3 / +1 Query: 207 VCSDLVKGAKEKQLKVKGPVRMPTKVLNITTRKSPCGEG 323 VC DLVKGAK+K LKVKGPVRMPTKVL+ITTRKSPCGEG Sbjct: 379 VCGDLVKGAKDKSLKVKGPVRMPTKVLHITTRKSPCGEG 495 Score = 84.0 bits (177), Expect(3) = 2e-61 Identities = 34/39 (87%), Positives = 38/39 (97%) Frame = +3 / +1 Query: 90 ELAYAPPMKSGKLGFEGTQEVQHRIRITLSSKSVKNLEK 206 ++AYAPPMKSGK+GFE +QEVQHRIRITLSSKSVKNLEK Sbjct: 160 DVAYAPPMKSGKIGFESSQEVQHRIRITLSSKSVKNLEK 276 Score = 110 bits (234), Expect(3) = 7e-50 Identities = 47/48 (97%), Positives = 47/48 (97%) Frame = -1 / -2 Query: 463 YWSLMVTSTSTPGSMVIEVICLTTSGELTRSITLLCTRISNRSQVLVP 320 YWSLMVTSTSTPGSMVIEVICLTTS ELTRSITLLCTRISNRSQVLVP Sbjct: 1754 YWSLMVTSTSTPGSMVIEVICLTTSAELTRSITLLCTRISNRSQVLVP 1611 Score = 69.8 bits (146), Expect(3) = 7e-50 Identities = 30/39 (76%), Positives = 30/39 (76%) Frame = -1 / -2 Query: 322 PSPQGDFLVVMLSTLVGILTGPLTLSCFSLAPFTRSEHT 206 PSPQGDFLVVM STLVGI TGP T SLAPFTRS T Sbjct: 494 PSPQGDFLVVMWSTLVGIRTGPFTFKLLSLAPFTRSPQT 378 Score = 62.5 bits (130), Expect(3) = 7e-50 Identities = 26/32 (81%), Positives = 27/32 (84%) Frame = -1 / -2 Query: 205 FSRFLTDLEERVMRMRCCTSCVPSKPSLPDFI 110 FSRFLT LEERVMR+ CCTSC SKP LPDFI Sbjct: 275 FSRFLTLLEERVMRILCCTSCELSKPILPDFI 180 Score = 91.3 bits (193), Expect(2) = 4e-23 Identities = 39/48 (81%), Positives = 41/48 (85%) Frame = -2 / -3 Query: 462 TGR*WSLQPRHRAQW**R*SA*RRLGS*RGQSPSCAPASQTDPRCWYL 319 TGR*WSLQP H AQW* R*SA*+ L S*+ QSP CAPASQTDPRCWYL Sbjct: 1753 TGR*WSLQPPHLAQW*LR*SA*QHLQS*QDQSPFCAPASQTDPRCWYL 1610 Score = 40.5 bits (82), Expect(2) = 4e-23 Identities = 19/38 (50%), Positives = 19/38 (50%) Frame = -3 / -1 Query: 323 TFSAGGFPGGDVEHLGGHXXXXXXXXXXXXXXLHQIRA 210 TFS PGGDVEHLGGH LHQI A Sbjct: 495 TFSTRRLPGGDVEHLGGHPHGALHLQALVLGSLHQITA 382 Score = 89.0 bits (188), Expect = 3e-17 Identities = 40/48 (83%), Positives = 41/48 (85%) Frame = +2 / +3 Query: 320 RYQHLGSV*DAGAQEGD*PRQLPRRRQADHLYHH*ARCRG*SDHQRPV 463 RYQHLGSV*DAGAQ+GD* QL R QADHL HH*ARC G*SDHQRPV Sbjct: 1611 RYQHLGSV*DAGAQKGD*SCQLCRCCQADHLNHH*ARCGG*SDHQRPV 1754 Score = 53.3 bits (110), Expect(2) = 3e-09 Identities = 18/21 (85%), Positives = 20/21 (95%) Frame = -3 / -1 Query: 383 ADEVNHPLVHPHLKPIPGVGT 321 AD++NHP VHPHLKPIPGVGT Sbjct: 1674 ADKINHPFVHPHLKPIPGVGT 1612 Score = 27.6 bits (54), Expect(2) = 3e-09 Identities = 10/16 (62%), Positives = 13/16 (81%) Frame = -3 / -1 Query: 485 HIMGVA*LLVADGHFN 438 H++ + LLVADGHFN Sbjct: 1776 HLLDSSILLVADGHFN 1729 Score = 42.8 bits (87), Expect = 0.003 Identities = 15/17 (88%), Positives = 17/17 (100%) Frame = +1 / +2 Query: 319 KVPTPGIGLRCGCTRG* 369 +VPTPGIGLRCGCT+G* Sbjct: 1610 QVPTPGIGLRCGCTKG* 1660
>LOC_Os10g08930:12010.t00712:unspliced-genomic 40S ribosomal protein S20, putative, expressed| Length = 3083 Score = 108 bits (230), Expect(3) = 3e-46 Identities = 44/50 (88%), Positives = 47/50 (94%) Frame = +3 / +2 Query: 321 GTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ*LC 470 GTNTWDRFE R+HKRVIDL+SSPDVVKQITSITIEPGVEVEVTI+D * C Sbjct: 2624 GTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIADV*CC 2773 Score = 87.7 bits (185), Expect(3) = 3e-46 Identities = 34/39 (87%), Positives = 39/39 (100%) Frame = +3 / +3 Query: 207 VCSDLVKGAKEKQLKVKGPVRMPTKVLNITTRKSPCGEG 323 VC+DLVKGAK+KQL+VKGPVR+PTKVL+ITTRKSPCGEG Sbjct: 363 VCADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEG 479 Score = 35.4 bits (71), Expect(3) = 3e-46 Identities = 15/17 (88%), Positives = 17/17 (100%) Frame = +3 / +1 Query: 156 HRIRITLSSKSVKNLEK 206 +RIRITLSSK+VKNLEK Sbjct: 190 NRIRITLSSKNVKNLEK 240 Score = 76.7 bits (161), Expect(3) = 1e-32 Identities = 35/49 (71%), Positives = 38/49 (77%) Frame = -1 / -3 Query: 466 NYWSLMVTSTSTPGSMVIEVICLTTSGELTRSITLLCTRISNRSQVLVP 320 +Y S +VTSTSTPGSMV+EVIC TTSGEL RSIT L R S RS V VP Sbjct: 2769 HYTSAIVTSTSTPGSMVMEVICFTTSGELMRSITRLWMRNSKRSHVFVP 2623 Score = 73.5 bits (154), Expect(3) = 1e-32 Identities = 31/40 (77%), Positives = 32/40 (80%) Frame = -1 / -2 Query: 325 VPSPQGDFLVVMLSTLVGILTGPLTLSCFSLAPFTRSEHT 206 +PSP GD VVM STLVGILTGPLT SC SLAPFTRS T Sbjct: 481 IPSPHGDLRVVMWSTLVGILTGPLTRSCLSLAPFTRSAQT 362 Score = 35.4 bits (71), Expect(3) = 1e-32 Identities = 16/20 (80%), Positives = 16/20 (80%) Frame = -1 / -1 Query: 205 FSRFLTDLEERVMRMRCCTS 146 FSRFLT LEERVMRMR S Sbjct: 239 FSRFLTFLEERVMRMRLSCS 180 Score = 54.2 bits (112), Expect = 1e-06 Identities = 23/46 (50%), Positives = 34/46 (73%) Frame = -2 / -1 Query: 447 SLQPRHRAQW**R*SA*RRLGS*RGQSPSCAPASQTDPRCWYLLRR 310 S +PRH+A+W* R*SA + LGS* +SP+C ++ DP C +L+R+ Sbjct: 2750 SPRPRHQARW*WR*SASQHLGS**DRSPACGCGTRNDPMCLFLVRK 2613 Score = 48.3 bits (99), Expect = 6e-05 Identities = 22/43 (51%), Positives = 26/43 (60%) Frame = +2 / +1 Query: 320 RYQHLGSV*DAGAQEGD*PRQLPRRRQADHLYHH*ARCRG*SD 448 R +H+GS Q GD QLPR +ADHL+HH A CRG D Sbjct: 2623 RNKHMGSFRVPHPQAGDRSHQLPRCCEADHLHHHRAWCRGRGD 2751 Score = 40.9 bits (83), Expect = 0.010 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = -3 / -2 Query: 473 VA*LLVADGHFNXXXXXXXXXXXXXXDVWGADEVNHPLVHPHLKPIPGVGTFS 315 +A L ++D H + ++WGADE++HPLV L+ IP V ++S Sbjct: 2776 LAALHISDRHLDLDTRLDGDGGDLLHNIWGADEIDHPLVDAELETIPCVCSWS 2618 Score = 35.9 bits (72), Expect = 0.32 Identities = 15/33 (45%), Positives = 22/33 (66%) Frame = -3 / -1 Query: 371 NHPLVHPHLKPIPGVGTFSAGGFPGGDVEHLGG 273 ++P+ H + + + V TF+A GGDVEHLGG Sbjct: 527 SNPIKHCN*RWLQLVNTFTARRLAGGDVEHLGG 429
>LOC_Os03g14530:12003.t01242:unspliced-genomic 40S ribosomal protein S20, putative, expressed| Length = 2018 Score = 87.7 bits (185), Expect(3) = 3e-30 Identities = 34/39 (87%), Positives = 39/39 (100%) Frame = +3 / +2 Query: 207 VCSDLVKGAKEKQLKVKGPVRMPTKVLNITTRKSPCGEG 323 VC+DLVKGAK+KQL+VKGPVR+PTKVL+ITTRKSPCGEG Sbjct: 923 VCADLVKGAKDKQLRVKGPVRIPTKVLHITTRKSPCGEG 1039 Score = 52.8 bits (109), Expect(3) = 3e-30 Identities = 27/50 (54%), Positives = 35/50 (70%) Frame = +2 / +3 Query: 320 RYQHLGSV*DAGAQEGD*PRQLPRRRQADHLYHH*ARCRG*SDHQRPVVM 469 R +HLGSV* QEGD*P QLP +AD+L+++* C G* D+ R V+M Sbjct: 1566 RNKHLGSV*VPHPQEGD*PYQLP*CGEADNLHNN*TWC*G*GDNSRCVMM 1715 Score = 35.4 bits (71), Expect(3) = 3e-30 Identities = 15/17 (88%), Positives = 17/17 (100%) Frame = +3 / +2 Query: 156 HRIRITLSSKSVKNLEK 206 +RIRITLSSK+VKNLEK Sbjct: 137 NRIRITLSSKNVKNLEK 187 Score = 76.7 bits (161), Expect(3) = 8e-26 Identities = 32/40 (80%), Positives = 33/40 (82%) Frame = -1 / -3 Query: 325 VPSPQGDFLVVMLSTLVGILTGPLTLSCFSLAPFTRSEHT 206 +PSPQGD VVM STLVGILTGP TLSC SLAPFTRS T Sbjct: 1041 IPSPQGDLRVVMWSTLVGILTGPFTLSCLSLAPFTRSAQT 922 Score = 50.1 bits (103), Expect(3) = 8e-26 Identities = 24/44 (54%), Positives = 29/44 (65%) Frame = -2 / -2 Query: 447 SLQPRHRAQW**R*SA*RRLGS*RGQSPSCAPASQTDPRCWYLL 316 S QP+H+ Q R SA GS* GQSPSC +QTDPRC +L+ Sbjct: 1693 SPQPQHQVQLLWRLSASPHQGS**GQSPSCGCGTQTDPRCLFLI 1562 Score = 34.1 bits (68), Expect(3) = 8e-26 Identities = 15/20 (75%), Positives = 16/20 (80%) Frame = -1 / -3 Query: 205 FSRFLTDLEERVMRMRCCTS 146 FSRFLT L+ERVMRMR S Sbjct: 186 FSRFLTFLDERVMRMRLSCS 127 Score = 114 bits (243), Expect = 8e-25 Identities = 48/62 (77%), Positives = 52/62 (83%) Frame = +3 / +1 Query: 285 LNITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVTISDQ* 464 +N T S C GTNTWDRFE R+HKRVIDL+SSPDVVKQITSITIEPGVEVEVTI+D * Sbjct: 1531 INFTKSHSLCLSGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIADV* 1710 Query: 465 LC 470 C Sbjct: 1711 *C 1716 Score = 86.8 bits (183), Expect = 2e-16 Identities = 40/61 (65%), Positives = 46/61 (75%) Frame = -1 / -1 Query: 469 HNYWSLMVTSTSTPGSMVIEVICLTTSGELTRSITLLCTRISNRSQVLVPSPQGDFLVVM 290 H+Y S +VTSTSTPGS+V+EVIC TTSGEL RSITLL R SNRSQV VP + +V Sbjct: 1715 HHYTSAIVTSTSTPGSIVMEVICFTTSGELIRSITLLWMRNSNRSQVFVPDKHRECDLVK 1536 Query: 289 L 287 L Sbjct: 1535 L 1533 Score = 46.9 bits (96), Expect(2) = 4e-07 Identities = 22/55 (40%), Positives = 28/55 (50%) Frame = -3 / -3 Query: 491 KTHIMGVA*LLVADGHFNXXXXXXXXXXXXXXDVWGADEVNHPLVHPHLKPIPGV 327 K + +G+A L + H N + GAD+VNHPLV LKPIPGV Sbjct: 1737 KVNNLGIASLHICYCHLNLNTRFNCYGGYLLHHIRGADKVNHPLVDAELKPIPGV 1573 Score = 30.4 bits (60), Expect(2) = 4e-07 Identities = 11/17 (64%), Positives = 12/17 (70%) Frame = -3 / -2 Query: 323 TFSAGGFPGGDVEHLGG 273 TF+ G G DVEHLGG Sbjct: 1039 TFTTGRLAGSDVEHLGG 989
>LOC_Os03g10060:12003.t00809:unspliced-genomic chloroplast 30S ribosomal protein S10, putative, expressed| Length = 3575 Score = 39.1 bits (79), Expect = 0.034 Identities = 17/43 (39%), Positives = 24/43 (55%) Frame = +3 / +1 Query: 153 QHRIRITLSSKSVKNLEKVCSDLVKGAKEKQLKVKGPVRMPTK 281 + +IRI L S V +E C +++ AK K GPV +PTK Sbjct: 3007 KQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTK 3135
>LOC_Os02g04050:12002.t00304:unspliced-genomic chromosome segregation protein sudA, putative, expressed| Length = 5568 Score = 35.0 bits (70), Expect = 0.60 Identities = 19/69 (27%), Positives = 34/69 (49%) Frame = -1 / +3 Query: 370 ITLLCTRISNRSQVLVPSPQGDFLVVMLSTLVGILTGPLTLSCFSLAPFTRSEHTFSRFL 191 +TLL + + ++ + S G+ M S + IL GP+ L ++P R T +FL Sbjct: 2385 LTLLLSTCAAVKKLFISSSVGENERTMSSCFIFILNGPIVLLPALISPIVRWMITEEKFL 2564 Query: 190 TDLEERVMR 164 + R+M+ Sbjct: 2565 KECPMRIMK 2591
>LOC_Os09g07430:12009.t00539:unspliced-genomic retrotransposon, putative, centromere-specific| Length = 4746 Score = 34.5 bits (69), Expect = 0.82 Identities = 16/29 (55%), Positives = 19/29 (65%) Frame = +3 / -3 Query: 585 LCFVILSAYCLELSLSIFVLC*MFILHGS 671 L F++LS C LSL +FVL * F LH S Sbjct: 3280 LIFILLSCQCFVLSLYMFVL**AFSLHSS 3194
>LOC_Os01g70030:12001.t06305:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 4835 Score = 34.1 bits (68), Expect = 1.1 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 / -2 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT +R +PCG+GT++W F Sbjct: 820 PPSPPTSASQCYSRLTPCGDGTSSWQHF 737
>LOC_Os03g10140:12003.t00816:unspliced-genomic nucleic acid binding protein, putative, expressed| Length = 3204 Score = 34.1 bits (68), Expect = 1.1 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +2 / +1 Query: 374 PRQLPRRRQADHLYHH*ARCR 436 PR LP RR+ LYHH RCR Sbjct: 1096 PRLLPVRRRRKRLYHHPRRCR 1158
>LOC_Os12g39300:12012.t03610:unspliced-genomic cytochrome P450 81E1, putative, expressed| Length = 1917 Score = 31.8 bits (63), Expect(2) = 1.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -3 / +3 Query: 356 HPHLKPIPGVGTFSAGGFPGGDVEHLG 276 H H+ GVG +AGG PGGD E G Sbjct: 1092 HRHVGADNGVGDGAAGGAPGGDDEGQG 1172 Score = 23.1 bits (44), Expect(2) = 1.1 Identities = 11/35 (31%), Positives = 14/35 (40%) Frame = -2 / +2 Query: 621 TRDNRHLESRSKEPSHTKPSPHTTRSSKIILVRWC 517 TR R S + KP+P TT + WC Sbjct: 974 TRIRRRTASSTPSSRCKKPTPTTTPTMSSRASSWC 1078 Score = 33.1 bits (66), Expect = 2.1 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 / -3 Query: 289 TSPPGNPPAEKVPTPGIGLRCGCTR 363 +SPPG PPA PTP C C R Sbjct: 1159 SSPPGAPPAAPSPTPLSAPTCRCRR 1085
>LOC_Os01g04350:12001.t00323:unspliced-genomic 16.9 kDa class I heat shock protein 2, putative, expressed| Length = 942 Score = 33.6 bits (67), Expect = 1.6 Identities = 11/23 (47%), Positives = 12/23 (52%) Frame = +1 / -1 Query: 295 PPGNPPAEKVPTPGIGLRCGCTR 363 PP PP + P P G RC C R Sbjct: 318 PPAGPPGTRTPPPSPGSRCTCWR 250
>LOC_Os01g45910:12001.t04044:unspliced-genomic plastidic ATP/ADP-transporter, putative, expressed| Length = 4171 Score = 27.6 bits (54), Expect(2) = 1.6 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 / -1 Query: 374 PRQLPRRRQADHLYHH*AR 430 PRQ RR++ H +HH* R Sbjct: 364 PRQAARRKRPHHHHHH*RR 308 Score = 23.1 bits (44), Expect(2) = 1.6 Identities = 8/15 (53%), Positives = 9/15 (60%) Frame = +1 / -1 Query: 289 TSPPGNPPAEKVPTP 333 +SPP PPA P P Sbjct: 409 SSPPAAPPAPPPPPP 365
>LOC_Os10g01984:12010.t00094:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 15035 Score = 33.1 bits (66), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -1 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT VL + +P G+GT++W RF Sbjct: 6566 PPSPPTSVLRRYSHLTPSGDGTSSWQRF 6483
>LOC_Os04g21650:12004.t01896:unspliced-genomic expressed protein| Length = 8350 Score = 33.1 bits (66), Expect = 2.1 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = +3 / +3 Query: 609 YCLELSLSIFVLC*MFILHGSLLFIYEIW 695 +CLE++LS+ + I+H L+F+Y +W Sbjct: 1167 FCLEVTLSVQLTLAFHIVHSWLVFLYGLW 1253
>LOC_Os04g03670:12004.t00256:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3493 Score = 33.1 bits (66), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -3 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT VL + +P G+GT++W RF Sbjct: 728 PPSPPTSVLRRYSHLTPSGDGTSSWQRF 645
>LOC_Os01g71910:12001.t06483:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3683 Score = 33.1 bits (66), Expect = 2.1 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -1 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT VL + +P G+GT++W RF Sbjct: 764 PPSPPTSVLRRYSHLTPSGDGTSSWQRF 681
>LOC_Os07g40700:12007.t03729:unspliced-genomic rRNA methylase-like protein, putative, expressed| Length = 4439 Score = 27.2 bits (53), Expect(2) = 2.8 Identities = 11/22 (50%), Positives = 11/22 (50%) Frame = -3 / -2 Query: 335 PGVGTFSAGGFPGGDVEHLGGH 270 PG G GG GGD E G H Sbjct: 238 PGAGDGGEGGGEGGDGERPGSH 173 Score = 22.6 bits (43), Expect(2) = 2.8 Identities = 9/15 (60%), Positives = 10/15 (66%) Frame = -2 / -1 Query: 396 RRLGS*RGQSPSCAP 352 RR S*RG +P C P Sbjct: 368 RRGAS*RGAAPRCRP 324
>LOC_Os09g16890:12009.t01476:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 2607 Score = 32.7 bits (65), Expect = 2.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -3 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT L +R +P G+GT++W RF Sbjct: 817 PPSPPTSALRRYSRLTPSGDGTSSWRRF 734
>LOC_Os04g07980:12004.t00673:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3694 Score = 32.7 bits (65), Expect = 2.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -1 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT L +R +P G+GT++W RF Sbjct: 757 PPSPPTSALRRYSRLTPSGDGTSSWRRF 674
>LOC_Os01g36280:12001.t03177:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8630 Score = 32.7 bits (65), Expect = 2.9 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = +3 / -2 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT L +R +P G+GT++W RF Sbjct: 5962 PPSPPTSALRRYSRLTPSGDGTSSWRRF 5879
>LOC_Os01g72740:12001.t06561:unspliced-genomic cytochrome P450 71D8, putative, expressed| Length = 2208 Score = 26.3 bits (51), Expect(2) = 2.9 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +1 / -3 Query: 289 TSPPGNPPAEKVPTPGIGLRCGCTRG 366 +SPP PP P G G G RG Sbjct: 292 SSPPSPPPGRTAPASGHGRGGGA*RG 215 Score = 23.5 bits (45), Expect(2) = 2.9 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 / -2 Query: 153 QHRIRITLSSKSVKNLEKVCSDLVKGAK 236 + R R+ LSS SV +L L+ GAK Sbjct: 455 KERTRLGLSSSSVHSLRSSRRCLLNGAK 372
>LOC_Os09g29840:12009.t02662:unspliced-genomic endoplasmin precursor, putative, expressed| Length = 4893 Score = 32.2 bits (64), Expect = 4.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 / +1 Query: 318 EGTNTWDRFEMRVHKR 365 EGTNTW F++RVH+R Sbjct: 3952 EGTNTW*YFKLRVHER 3999
>LOC_Os09g26470:12009.t02326:unspliced-genomic IBR domain containing protein, expressed| Length = 5649 Score = 32.2 bits (64), Expect = 4.0 Identities = 13/26 (50%), Positives = 14/26 (53%) Frame = +1 / -3 Query: 289 TSPPGNPPAEKVPTPGIGLRCGCTRG 366 T PG PPA P+P R CTRG Sbjct: 1465 TPGPGTPPARPPPSPCRRCRWSCTRG 1388
>LOC_Os11g10310:12011.t00923:unspliced-genomic receptor-like protein kinase precursor, putative, expressed| Length = 10635 Score = 29.9 bits (59), Expect(2) = 5.0 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 / +1 Query: 621 TRDNRHLESRSKEPSHTKPSPHTTRSS 541 TRD+RH + +PS T P H SS Sbjct: 742 TRDSRHAVQSALQPSATSPVQHVLASS 822 Score = 24.9 bits (48), Expect(2) = 5.0 Identities = 10/30 (33%), Positives = 18/30 (60%) Frame = -1 / +3 Query: 277 VGILTGPLTLSCFSLAPFTRSEHTFSRFLT 188 + IL G +TL+C + + R + +S F+T Sbjct: 1680 LAILAG*ITLTCPTTS*VERYQQAYSNFIT 1769
>LOC_Os01g64850:12001.t05851:unspliced-genomic subtilisin-like protease precursor, putative| Length = 2274 Score = 24.4 bits (47), Expect(2) = 5.3 Identities = 8/13 (61%), Positives = 10/13 (76%) Frame = +2 / +3 Query: 383 LPRRRQADHLYHH 421 LPRRR A+H + H Sbjct: 1065 LPRRRHAEHHHRH 1103 Score = 24.4 bits (47), Expect(2) = 5.3 Identities = 8/12 (66%), Positives = 9/12 (75%) Frame = +1 / +2 Query: 547 SCSMRTGFCMTR 582 SC+M GFC TR Sbjct: 1214 SCAMTLGFCSTR 1249
>LOC_Os03g37140:12003.t03175:unspliced-genomic expressed protein| Length = 8984 Score = 31.8 bits (63), Expect = 5.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = +3 / -3 Query: 621 LSLSIFVLC*MFILHGSLLFIYEIW 695 L+LS F LC F+LH L +Y +W Sbjct: 7185 LTLSQFFLCYTFVLHWMTLHLYIVW 7111
>LOC_Os01g12110:12001.t01079:unspliced-genomic expressed protein| Length = 1237 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/44 (29%), Positives = 24/44 (54%) Frame = +3 / +1 Query: 318 EGTNTWDRFEMRVHKRVIDLVSSPDVVKQITSITIEPGVEVEVT 449 EG+ T D + H +++ + PD ++ +S+ I G VE+T Sbjct: 409 EGSATLDAYLSHKHDKLLAKLLQPDTYRKKSSLAIVDGFAVEIT 540
>LOC_Os07g36780:12007.t03347:unspliced-genomic serine/threonine-protein kinase receptor precursor, putative,| expressed Length = 2475 Score = 31.8 bits (63), Expect = 5.5 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 / -3 Query: 517 SHHPCKKI*RHISWG*HNYWSLMVTSTSTPG 425 S PCK +* H W H+ W L ++ PG Sbjct: 2230 SRQPCKLL*AHQHWHLHSTWGLTRSAHHLPG 2138
>LOC_Os04g46060:12004.t04138:unspliced-genomic OsWRKY36 - Superfamily of rice TFs having WRKY and zinc finger| domains, expressed Length = 6709 Score = 31.8 bits (63), Expect = 5.5 Identities = 12/23 (52%), Positives = 12/23 (52%) Frame = +1 / -2 Query: 292 SPPGNPPAEKVPTPGIGLRCGCT 360 SP GNPP P G CGCT Sbjct: 6372 SPCGNPPTAAPPASSRGSCCGCT 6304
>LOC_Os02g47810:12002.t04365:unspliced-genomic dof domain, zinc finger family protein, expressed| Length = 3699 Score = 31.8 bits (63), Expect = 5.5 Identities = 11/12 (91%), Positives = 11/12 (91%) Frame = -2 / +3 Query: 102 RRPAPSPWLLRC 67 RR APSPWLLRC Sbjct: 3327 RRRAPSPWLLRC 3362
>LOC_Os01g72760:12001.t06563:unspliced-genomic cytochrome P450 71D10, putative, expressed| Length = 1791 Score = 26.3 bits (51), Expect(2) = 7.2 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +1 / -2 Query: 289 TSPPGNPPAEKVPTPGIGLRCGCTRG 366 +SPP PP P G G G RG Sbjct: 359 SSPPSPPPGRTAPASGHGRGGGA*RG 282 Score = 22.1 bits (42), Expect(2) = 7.2 Identities = 12/36 (33%), Positives = 17/36 (47%) Frame = +3 / -1 Query: 153 QHRIRITLSSKSVKNLEKVCSDLVKGAKEKQLKVKG 260 + R R+ LSS S ++L L GAK + G Sbjct: 504 KERTRLGLSSSSAQSLRSSRRCLPNGAKTMSMLAVG 397
>LOC_Os12g14650:12012.t01326:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 3650 Score = 31.3 bits (62), Expect = 7.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 / -2 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT L +R +P G+GT++W F Sbjct: 784 PPSPPTSALRRYSRLTPSGDGTSSWQHF 701
>LOC_Os10g13430:12010.t01073:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 8354 Score = 31.3 bits (62), Expect = 7.5 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +3 / -2 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT VL R +P G+GT++W F Sbjct: 4837 PPSPPTSVLRRYIRLTPSGDGTSSWRHF 4754
>LOC_Os05g41700:12005.t03707:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 5631 Score = 31.3 bits (62), Expect = 7.5 Identities = 13/47 (27%), Positives = 25/47 (53%) Frame = +3 / +1 Query: 195 NLEKVCSDLVKGAKEKQLKVKGPVRMPTKVLNITTRKSPCGEGTNTW 335 +L + C V A+ ++ ++ GP R+P R +PCG +++W Sbjct: 3874 SLGRRCGGHVDLAERRRPQISGPPRLPGDQQYGGVRGTPCGTQSDSW 4014
>LOC_Os05g11690:12005.t01001:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class| Length = 5965 Score = 31.3 bits (62), Expect = 7.5 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 / -2 Query: 261 PVRMPTKVLNITTRKSPCGEGTNTWDRF 344 P PT L +R +P G+GT++W F Sbjct: 3540 PPSPPTSALRCYSRLTPSGDGTSSWRHF 3457
>LOC_Os12g30540:12012.t02761:unspliced-genomic ubiquitin carboxyl-terminal hydrolase 21, putative, expressed| Length = 14696 Score = 31.3 bits (62), Expect = 7.6 Identities = 10/20 (50%), Positives = 13/20 (65%) Frame = +1 / +2 Query: 292 SPPGNPPAEKVPTPGIGLRC 351 SPP PP ++P P G+RC Sbjct: 56 SPPPPPPQSRLPLPNRGIRC 115
>LOC_Os10g08540:12010.t00674:unspliced-genomic cytochrome P450 76B1, putative, expressed| Length = 6858 Score = 31.3 bits (62), Expect = 7.6 Identities = 13/25 (52%), Positives = 14/25 (56%) Frame = +1 / +2 Query: 289 TSPPGNPPAEKVPTPGIGLRCGCTR 363 +SPPG PP V TPG C TR Sbjct: 3620 SSPPGPPPTPPVTTPGTPSPCCPTR 3694
>LOC_Os09g13940:12009.t01183:unspliced-genomic AP2 domain containing protein, expressed| Length = 3467 Score = 31.3 bits (62), Expect = 7.6 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = -2 / -2 Query: 642 ERKLTEITRDNRHLESRSKEPSHTKPSPHTTRSSKII 532 ++K TR +H+ + + P H +P+P TR I+ Sbjct: 415 KKKSNLSTRKKKHVATNNNTPIHAEPTPTPTRDDPIL 305
>LOC_Os08g15590:12008.t01433:unspliced-genomic hypothetical protein| Length = 5448 Score = 31.3 bits (62), Expect = 7.6 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +1 / +1 Query: 478 MICVFKSFYKGGETPTYQDN 537 ++C F S YK G++ TYQ N Sbjct: 604 VVCFFHSHYKSGQSSTYQKN 663
>LOC_Os08g09360:12008.t00821:unspliced-genomic hypothetical protein| Length = 1578 Score = 31.3 bits (62), Expect = 7.6 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +2 / +3 Query: 314 RRRYQHLGSV*DAGAQEGD*PRQLPRRRQADHLYHH*ARCRG*SDHQR 457 RRR + V D A +G PR+L R +A HH R R S H+R Sbjct: 771 RRRVEAGAPVADQLADDGQPPRRLLLRARAAVAAHHGVRRRDASPHRR 914
>LOC_Os06g36490:12006.t03345:unspliced-genomic EREBP-4 like protein, putative, expressed| Length = 4445 Score = 31.3 bits (62), Expect = 7.6 Identities = 13/27 (48%), Positives = 17/27 (62%) Frame = +1 / +2 Query: 628 CQFSFCVECLYYMDRYYLSMRFGSVFI 708 CQFSFC + L+ M L + F S+FI Sbjct: 1631 CQFSFCRKLLHKMSTMCL*LGFSSLFI 1711
>LOC_Os03g07260:12003.t00590:unspliced-genomic TPR domain containing protein, putative| Length = 1611 Score = 31.3 bits (62), Expect = 7.6 Identities = 19/55 (34%), Positives = 27/55 (49%) Frame = -1 / -2 Query: 373 SITLLCTRISNRSQVLVPSPQGDFLVVMLSTLVGILTGPLTLSCFSLAPFTRSEH 209 ++ +L T S S++ P P L + LSTL P TLS + +P TR H Sbjct: 1526 ALPILTTLSSTSSRLPQPLPLSAPLSIALSTLSFPPIAPATLSATAASPGTRLPH 1362
>LOC_Os02g27240:12002.t02418:unspliced-genomic retrotransposon protein, putative, unclassified| Length = 2475 Score = 31.3 bits (62), Expect = 7.6 Identities = 10/16 (62%), Positives = 10/16 (62%) Frame = -2 / +2 Query: 372 QSPSCAPASQTDPRCW 325 QSPSC P PRCW Sbjct: 1178 QSPSCRPLPPRTPRCW 1225
>LOC_Os08g13060:12008.t01184:unspliced-genomic ATBPM1, putative, expressed| Length = 1504 Score = 24.0 bits (46), Expect(3) = 8.9 Identities = 10/17 (58%), Positives = 10/17 (58%) Frame = -3 / +1 Query: 335 PGVGTFSAGGFPGGDVE 285 P GTF GG G DVE Sbjct: 1174 PKNGTFCLGGCRGADVE 1224 Score = 23.1 bits (44), Expect(3) = 8.9 Identities = 8/11 (72%), Positives = 9/11 (81%) Frame = -2 / +1 Query: 591 SKEPSHTKPSP 559 SK PSH+ PSP Sbjct: 7 SKSPSHSIPSP 39 Score = 21.7 bits (41), Expect(3) = 8.9 Identities = 9/19 (47%), Positives = 11/19 (57%) Frame = -1 / +3 Query: 481 SWG*HNYWSLMVTSTSTPG 425 SW + WS M +S TPG Sbjct: 573 SWMIASPWSSMSSSGETPG 629
>LOC_Os02g50690:12002.t04653:unspliced-genomic anther-specific proline-rich protein APG precursor, putative,| expressed Length = 2018 Score = 29.0 bits (57), Expect(2) = 9.5 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 / -3 Query: 310 PAEKVPTPGIGLRCGC 357 PA + P P G RCGC Sbjct: 1590 PASRAPRPRTGTRCGC 1543 Score = 22.6 bits (43), Expect(2) = 9.5 Identities = 7/16 (43%), Positives = 13/16 (81%) Frame = +2 / -2 Query: 488 SLNLFTRVVRHQRTKI 535 S++ +T+++RH TKI Sbjct: 928 SIDEYTKIIRHTCTKI 881
>LOC_Os06g37620:12006.t03457:unspliced-genomic ATP binding protein, putative, expressed| Length = 4230 Score = 28.1 bits (55), Expect(2) = 10.0 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -2 / -2 Query: 117 TSSAARRPAPSPWLLRCA 64 T ++A RPAP+PW R A Sbjct: 227 TWTSATRPAPAPWAARLA 174 Score = 24.4 bits (47), Expect(2) = 10.0 Identities = 10/16 (62%), Positives = 12/16 (75%) Frame = -1 / -1 Query: 685 *INNSDPCSINIQHRT 638 *+ N DP SINI+ RT Sbjct: 3279 *LKNDDPQSINIRFRT 3232 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 228,977,497 Number of extensions: 3492778 Number of successful extensions: 18677 Number of sequences better than 10.0: 45 Length of query: 240 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 191 Effective length of database: 52,856,264 Effective search space: 10095546424 Effective search space used: 10095546424 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
