Clone Name | FLbaf92k05 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ507088.1|HVU507088 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-112 gene) Length = 4654 Score = 777 bits (392), Expect = 0.0 Identities = 392/392 (100%) Strand = Plus / Plus Query: 214 cagacatcagctcgctgcccaaggacggactgccaagttctctgcaagaactagagatca 273 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4236 cagacatcagctcgctgcccaaggacggactgccaagttctctgcaagaactagagatca 4295 Query: 274 aagactgtcctgccatcaaatctctgcccagggacggcctgtcaagttcactacggaaat 333 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4296 aagactgtcctgccatcaaatctctgcccagggacggcctgtcaagttcactacggaaat 4355 Query: 334 tagaagtttgtggtgccatcagcgaggagcttaaaaggcagtgccgcaagttaaaaggaa 393 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4356 tagaagtttgtggtgccatcagcgaggagcttaaaaggcagtgccgcaagttaaaaggaa 4415 Query: 394 ccattccaataatcaaagactactaaggctaatccaagttaccatgcaggcctctggcat 453 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4416 ccattccaataatcaaagactactaaggctaatccaagttaccatgcaggcctctggcat 4475 Query: 454 gaagttgtagaagtgctgttatccttgaagttttttgcatacacgagcagttcggatgcc 513 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4476 gaagttgtagaagtgctgttatccttgaagttttttgcatacacgagcagttcggatgcc 4535 Query: 514 atggccttgggtggtatctcctacataaatatgggatctgtcttggacttgcacattctt 573 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4536 atggccttgggtggtatctcctacataaatatgggatctgtcttggacttgcacattctt 4595 Query: 574 atggacttggagatctctcatcttctagtcgc 605 |||||||||||||||||||||||||||||||| Sbjct: 4596 atggacttggagatctctcatcttctagtcgc 4627 Score = 428 bits (216), Expect = e-116 Identities = 216/216 (100%) Strand = Plus / Plus Query: 1 ggttctgagccctcacggctgtatggccaagagattccttcctcttcatccaaactcgaa 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3926 ggttctgagccctcacggctgtatggccaagagattccttcctcttcatccaaactcgaa 3985 Query: 61 cgtctcactacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3986 cgtctcactacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 4045 Query: 121 tcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttcacagaggag 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4046 tcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttcacagaggag 4105 Query: 181 cacgaggaggcccttcacctcctcaattctctccag 216 |||||||||||||||||||||||||||||||||||| Sbjct: 4106 cacgaggaggcccttcacctcctcaattctctccag 4141 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2184 tggccttgggtggtatctcct 2204 ||||||||||||||||||||| Sbjct: 4537 tggccttgggtggtatctcct 4557
>emb|AJ507097.1|HVU507097 Hordeum vulgare mRNA for NBS-LRR disease resistance protein homologue (rga S-9217 gene) Length = 5145 Score = 365 bits (184), Expect = 5e-97 Identities = 211/220 (95%) Strand = Plus / Plus Query: 212 tccagacatcagctcgctgcccaaggacggactgccaagttctctgcaagaactagagat 271 ||||| |||||| | |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4529 tccagccatcaggttgctgcccaaggacggactgccaagttctctgcaagaactagatat 4588 Query: 272 caaagactgtcctgccatcaaatctctgcccagggacggcctgtcaagttcactacggaa 331 |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| Sbjct: 4589 caaagactgtcctgccatcaaatctctgcccaaggacggcctgccaagttcactacggaa 4648 Query: 332 attagaagtttgtggtgccatcagcgaggagcttaaaaggcagtgccgcaagttaaaagg 391 ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| Sbjct: 4649 attagaagtttgtggtggcatcagcgaggagcttaaaaggcagtgctgcaagttaaaagg 4708 Query: 392 aaccattccaataatcaaagactactaaggctaatccaag 431 ||||||||||||||||| |||||||||||||||||||||| Sbjct: 4709 aaccattccaataatcatagactactaaggctaatccaag 4748 Score = 335 bits (169), Expect = 4e-88 Identities = 205/217 (94%) Strand = Plus / Plus Query: 1 ggttctgagccctcacggctgtatggccaagagattccttcctcttcatccaaactcgaa 60 ||||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| Sbjct: 4221 ggttctgagccctcacggctgcatgaccaacagattccttcctcttcatccaaactcgaa 4280 Query: 61 cgtctcactacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4281 catctcactacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 4340 Query: 121 tcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttcacagaggag 180 ||||||||||||||||||| |||| | | | |||||||||||||||||||||||||| Sbjct: 4341 tcctcccttaccagattaacctttttgaacatccaagaggtggagcgcttcacagaggag 4400 Query: 181 cacgaggaggcccttcacctcctcaattctctccaga 217 ||||||||||||||||||||||||||||||||||||| Sbjct: 4401 cacgaggaggcccttcacctcctcaattctctccaga 4437 Score = 303 bits (153), Expect = 1e-78 Identities = 163/165 (98%), Gaps = 1/165 (0%) Strand = Plus / Plus Query: 442 ggcctctggcatgaagttgtagaagtgctgttatccttgaagttttttgcatacacgagc 501 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4857 ggcctctggcatgaagttatagaagtgctgttatccttgaagttttttgcatacacgagc 4916 Query: 502 agttcggatgccatggccttgggtggtatctcctacataaatatgggatctgtcttggac 561 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4917 agttcggatgccatggccttgggtggtatctcctacataaatatgggatctgtcttggac 4976 Query: 562 ttgcacattcttatgga-cttggagatctctcatcttctagtcgc 605 ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 4977 ttgcacattcttatggaccttggagatctctcatcttctagtcgc 5021 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2184 tggccttgggtggtatctcct 2204 ||||||||||||||||||||| Sbjct: 4930 tggccttgggtggtatctcct 4950
>emb|AJ507091.1|HVU507091 Hordeum vulgare partial mRNA for NBS-LRR disease resistance protein homologue (rga S-226 gene) Length = 5451 Score = 317 bits (160), Expect = 1e-82 Identities = 193/204 (94%) Strand = Plus / Plus Query: 228 ctgcccaaggacggactgccaagttctctgcaagaactagagatcaaagactgtcctgcc 287 |||||||||||||| |||||||||||||| |||||||||||||||| | |||| |||||| Sbjct: 4838 ctgcccaaggacggcctgccaagttctctacaagaactagagatcagaaactgccctgcc 4897 Query: 288 atcaaatctctgcccagggacggcctgtcaagttcactacggaaattagaagtttgtggt 347 |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||| | Sbjct: 4898 atcaaatctctgcccaaggacggcctgccaagttcactacggaaattagaagtttgtgat 4957 Query: 348 gccatcagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatc 407 | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4958 ggcatcagcgaggaacttaaaaggcagtgccgcaagttaaaaggaaccattccaataatc 5017 Query: 408 aaagactactaaggctaatccaag 431 | |||||||||||||||||||||| Sbjct: 5018 atagactactaaggctaatccaag 5041 Score = 287 bits (145), Expect = 9e-74 Identities = 198/216 (91%), Gaps = 6/216 (2%) Strand = Plus / Plus Query: 1 ggttctgagccctcacggctgtatggccaagagattccttcctcttcatccaaactcgaa 60 ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| Sbjct: 4451 ggttctgagccctcacggctgcatggccaagagattccttc------atccaaactcgaa 4504 Query: 61 cgtctcactacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 120 ||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4505 cgtgtttttacagatgacttgacgggagtccttactgcgcccatctgcagactcctctct 4564 Query: 121 tcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttcacagaggag 180 |||||||||||| ||||| |||| | | |||| |||||||||||||||||||||||||| Sbjct: 4565 tcctcccttaccgaattaaccttttgtgagaaccaagaggtggagcgcttcacagaggag 4624 Query: 181 cacgaggaggcccttcacctcctcaattctctccag 216 |||||||||||||||||||||||||||||||||||| Sbjct: 4625 cacgaggaggcccttcacctcctcaattctctccag 4660 Score = 196 bits (99), Expect = 3e-46 Identities = 106/107 (99%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 442 ggcctctggcatgaagttgtagaagtgctgttatccttgaagttttttgcata-cacgag 500 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 5149 ggcctctggcatgaagttgtagaagtgctgttatccttgaagttttttgcataacacgag 5208 Query: 501 cagttcggatgccatggccttgggtggtatctcctacataaatatgg 547 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5209 cagttcggatgccatggccttgggtggtatctcctacataaatatgg 5255 Score = 174 bits (88), Expect = 9e-40 Identities = 109/116 (93%) Strand = Plus / Plus Query: 212 tccagacatcagctcgctgcccaaggacggactgccaagttctctgcaagaactagagat 271 ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 4753 tccagccatcaggtcgctgcccaaggacggactgccaagttctctgcaagaactagatat 4812 Query: 272 caaagactgtcctgccatcaaatctctgcccagggacggcctgtcaagttcactac 327 ||||| |||||||||||||||||||||||||| |||||||||| ||||||| |||| Sbjct: 4813 caaagtctgtcctgccatcaaatctctgcccaaggacggcctgccaagttctctac 4868 Score = 117 bits (59), Expect = 2e-22 Identities = 59/59 (100%) Strand = Plus / Plus Query: 547 ggatctgtcttggacttgcacattcttatggacttggagatctctcatcttctagtcgc 605 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5388 ggatctgtcttggacttgcacattcttatggacttggagatctctcatcttctagtcgc 5446 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2184 tggccttgggtggtatctcct 2204 ||||||||||||||||||||| Sbjct: 5223 tggccttgggtggtatctcct 5243
>ref|NM_001065064.1| Oryza sativa (japonica cultivar-group) Os06g0707800 (Os06g0707800) mRNA, complete cds Length = 4015 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 353 cagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 3119 cagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaaga 3178 Query: 413 c 413 | Sbjct: 3179 c 3179 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctc 119 ||||||||||||||||||||| Sbjct: 2843 gcccatctgcagactcctctc 2863
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 353 cagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 29425322 cagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaaga 29425263 Query: 413 c 413 | Sbjct: 29425262 c 29425262 Score = 65.9 bits (33), Expect = 6e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 ||||||||| |||||||||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 29403389 cgaggagctcaaaaggcagtgccgcaagctaagaggaacaattccgatcatcaaaga 29403333 Score = 61.9 bits (31), Expect = 9e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 354 agcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 ||||| ||||| |||||||||||||||||| |||||||||| ||| |||| ||| |||| Sbjct: 22971639 agcgaagagctcaaaaggcagtgccgcaagctaaaaggaacaattgcaatcatcgaaga 22971581 Score = 61.9 bits (31), Expect = 9e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 88 gtccttactgcgcccatctgcagactcctctcttcctcccttaccagattaagctttggg 147 |||||| | |||||||||||||| ||||| ||||||| || ||||| ||| | || | Sbjct: 29381747 gtccttgccgcgcccatctgcagcctccttgcttcctcactcaccagcctaaccattagt 29381688 Query: 148 gggaacgaagaggtggagcgcttcacagaggagca 182 ||||||| |||||||||||||||||| ||||||| Sbjct: 29381687 tggaacgacgaggtggagcgcttcacaaaggagca 29381653 Score = 52.0 bits (26), Expect = 0.009 Identities = 50/58 (86%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaagac 413 ||||||||| ||||||||||||||| | | | |||||||||||| || ||||||||| Sbjct: 29381451 cgaggagctcaaaaggcagtgccgcgacctgagaggaaccattccgatcatcaaagac 29381394 Score = 52.0 bits (26), Expect = 0.009 Identities = 50/58 (86%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaagac 413 ||||||||| ||||| |||||||| ||| ||| |||||||||||| || ||| ||||| Sbjct: 29411442 cgaggagctcaaaagacagtgccgtaagctaagaggaaccattccgatcatccaagac 29411385 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gcccatctgcagactcctctc 119 ||||||||||||||||||||| Sbjct: 29425598 gcccatctgcagactcctctc 29425578
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Minus Query: 353 cagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 136203 cagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaaga 136144 Query: 413 c 413 | Sbjct: 136143 c 136143 Score = 65.9 bits (33), Expect = 6e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 ||||||||| |||||||||||||||||| ||| |||||| ||||| || |||||||| Sbjct: 114270 cgaggagctcaaaaggcagtgccgcaagctaagaggaacaattccgatcatcaaaga 114214 Score = 61.9 bits (31), Expect = 9e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 88 gtccttactgcgcccatctgcagactcctctcttcctcccttaccagattaagctttggg 147 |||||| | |||||||||||||| ||||| ||||||| || ||||| ||| | || | Sbjct: 92628 gtccttgccgcgcccatctgcagcctccttgcttcctcactcaccagcctaaccattagt 92569 Query: 148 gggaacgaagaggtggagcgcttcacagaggagca 182 ||||||| |||||||||||||||||| ||||||| Sbjct: 92568 tggaacgacgaggtggagcgcttcacaaaggagca 92534 Score = 52.0 bits (26), Expect = 0.009 Identities = 50/58 (86%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaagac 413 ||||||||| ||||||||||||||| | | | |||||||||||| || ||||||||| Sbjct: 92332 cgaggagctcaaaaggcagtgccgcgacctgagaggaaccattccgatcatcaaagac 92275 Score = 52.0 bits (26), Expect = 0.009 Identities = 50/58 (86%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaagac 413 ||||||||| ||||| |||||||| ||| ||| |||||||||||| || ||| ||||| Sbjct: 122323 cgaggagctcaaaagacagtgccgtaagctaagaggaaccattccgatcatccaagac 122266 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 gcccatctgcagactcctctc 119 ||||||||||||||||||||| Sbjct: 136479 gcccatctgcagactcctctc 136459
>dbj|AK100253.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061C20, full insert sequence Length = 2552 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 353 cagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 1296 cagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaaga 1355 Query: 413 c 413 | Sbjct: 1356 c 1356
>dbj|AK099567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034N02, full insert sequence Length = 4016 Score = 89.7 bits (45), Expect = 4e-14 Identities = 57/61 (93%) Strand = Plus / Plus Query: 353 cagcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 |||||||||||| |||||||||||||||||| ||| ||||||||||||||| |||||||| Sbjct: 3120 cagcgaggagctcaaaaggcagtgccgcaagctaagaggaaccattccaatcatcaaaga 3179 Query: 413 c 413 | Sbjct: 3180 c 3180 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctc 119 ||||||||||||||||||||| Sbjct: 2844 gcccatctgcagactcctctc 2864
>gb|AF402959.1| Oryza sativa chromosome 4 clones V17 and 214, genomic sequence Length = 64224 Score = 87.7 bits (44), Expect = 2e-13 Identities = 86/100 (86%) Strand = Plus / Plus Query: 98 cgcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaag 157 ||||||||||||||||||||||||||||||| ||| | || || |||| ||||||| | Sbjct: 53661 cgcccatctgcagactcctctcttcctccctcaccgaactacgccttggatggaacgacg 53720 Query: 158 aggtggagcgcttcacagaggagcacgaggaggcccttca 197 |||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 53721 aggtggagcgtttcacgaaggagcaagaggaggcacttca 53760
>ref|NM_001060482.1| Oryza sativa (japonica cultivar-group) Os04g0626500 (Os04g0626500) mRNA, partial cds Length = 4250 Score = 79.8 bits (40), Expect = 4e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||| ||||||||||||||||| ||| | || || |||| ||||||| || Sbjct: 469 gcccatctgcttgctcctctcttcctccctcaccgaactacgccttggatggaacgacga 528 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttcacctcctcaattctctcc 214 |||||||||||||| ||||||| |||||||||||||| ||||||| ||||||| Sbjct: 529 ggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctcc 584 Score = 77.8 bits (39), Expect = 2e-10 Identities = 84/99 (84%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 1708 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 1767 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 1768 ggtggagcgtttcacgaaggagcaagaggaggcacttca 1806
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 79.8 bits (40), Expect = 4e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||| ||||||||||||||||| ||| | || || |||| ||||||| || Sbjct: 31892996 gcccatctgcttgctcctctcttcctccctcaccgaactacgccttggatggaacgacga 31893055 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttcacctcctcaattctctcc 214 |||||||||||||| ||||||| |||||||||||||| ||||||| ||||||| Sbjct: 31893056 ggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctcc 31893111 Score = 77.8 bits (39), Expect = 2e-10 Identities = 84/99 (84%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 31895859 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 31895918 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 31895919 ggtggagcgtttcacgaaggagcaagaggaggcacttca 31895957
>emb|AL606669.4|OSJN00106 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0060E08, complete sequence Length = 166951 Score = 79.8 bits (40), Expect = 4e-11 Identities = 97/116 (83%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||| ||||||||||||||||| ||| | || || |||| ||||||| || Sbjct: 65862 gcccatctgcttgctcctctcttcctccctcaccgaactacgccttggatggaacgacga 65921 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttcacctcctcaattctctcc 214 |||||||||||||| ||||||| |||||||||||||| ||||||| ||||||| Sbjct: 65922 ggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctcacctctctcc 65977 Score = 77.8 bits (39), Expect = 2e-10 Identities = 84/99 (84%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 68725 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 68784 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 68785 ggtggagcgtttcacgaaggagcaagaggaggcacttca 68823
>dbj|AK069923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035K08, full insert sequence Length = 4256 Score = 77.8 bits (39), Expect = 2e-10 Identities = 90/107 (84%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||| ||||||||||||||||| ||| | || || |||| ||||||| || Sbjct: 470 gcccatctgcttgctcctctcttcctccctcaccgaactacgccttggatggaacgacga 529 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttcacctcctca 205 |||||||||||||| ||||||| |||||||||||||| ||||||| Sbjct: 530 ggtggagcgcttcatgaaggagcaagaggaggcccttcagctcctca 576 Score = 77.8 bits (39), Expect = 2e-10 Identities = 84/99 (84%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 1709 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 1768 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||||||| ||||| ||||||| |||||||| ||||| Sbjct: 1769 ggtggagcgtttcacgaaggagcaagaggaggcacttca 1807 Score = 46.1 bits (23), Expect = 0.56 Identities = 44/51 (86%) Strand = Plus / Plus Query: 218 catcagctcgctgcccaaggacggactgccaagttctctgcaagaactaga 268 |||||| ||||||||||||| || || || ||||| |||||||||||||| Sbjct: 686 catcaggtcgctgcccaagggtggcctccccagttcactgcaagaactaga 736
>emb|CT827955.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0117N13, complete sequence Length = 105220 Score = 69.9 bits (35), Expect = 4e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 9395 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 9454 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 9455 ggtggggcgtttcacgaaggagcaagaggaggcacttca 9493
>emb|CR855147.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0148A10, complete sequence Length = 96027 Score = 69.9 bits (35), Expect = 4e-08 Identities = 83/99 (83%) Strand = Plus / Plus Query: 99 gcccatctgcagactcctctcttcctcccttaccagattaagctttggggggaacgaaga 158 |||||||||||||||||||||||||||||| |||| || | |||| ||||||| || Sbjct: 82839 gcccatctgcagactcctctcttcctccctcaccaagctagtccttggatggaacgacga 82898 Query: 159 ggtggagcgcttcacagaggagcacgaggaggcccttca 197 ||||| ||| ||||| ||||||| |||||||| ||||| Sbjct: 82899 ggtggggcgtttcacgaaggagcaagaggaggcacttca 82937
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | ||||||| ||||||||| ||||| Sbjct: 17777416 ctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttc 17777357 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 17777356 acaaaggagcaagagaaggcccttcac 17777330 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | ||||||| ||||||||| ||||| Sbjct: 17799937 ctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttc 17799878 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 17799877 acaaaggagcaagagaaggcccttcac 17799851 Score = 61.9 bits (31), Expect = 9e-06 Identities = 73/87 (83%) Strand = Plus / Minus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | | ||||| ||||||||| ||||| Sbjct: 17749364 ctcctctcttcctccctaaccaaattagtccttagttgcaacgatgaggtggagtgcttc 17749305 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 17749304 acaaaggagcaagagaaggcccttcac 17749278 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 17748045 cgaggagctaaaaaggcagtgccgcaag 17748018 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 17776931 cgaggagctaaaaaggcagtgccgcaag 17776904 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 17799452 cgaggagctaaaaaggcagtgccgcaag 17799425
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Plus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | ||||||| ||||||||| ||||| Sbjct: 3937 ctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttc 3996 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 3997 acaaaggagcaagagaaggcccttcac 4023 Score = 61.9 bits (31), Expect = 9e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | | ||||| ||||||||| ||||| Sbjct: 31989 ctcctctcttcctccctaaccaaattagtccttagttgcaacgatgaggtggagtgcttc 32048 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 32049 acaaaggagcaagagaaggcccttcac 32075 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 4422 cgaggagctaaaaaggcagtgccgcaag 4449 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Plus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 33308 cgaggagctaaaaaggcagtgccgcaag 33335
>emb|AL731787.3|CNS08C8B Oryza sativa chromosome 12, . BAC OSJNBb0014C10 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 142246 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | ||||||| ||||||||| ||||| Sbjct: 19135 ctcctctcttcctccctaaccaaattagaccttcgttggaacgatgaggtggagtgcttc 19076 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 19075 acaaaggagcaagagaaggcccttcac 19049 Score = 48.1 bits (24), Expect = 0.14 Identities = 27/28 (96%) Strand = Plus / Minus Query: 356 cgaggagcttaaaaggcagtgccgcaag 383 ||||||||| |||||||||||||||||| Sbjct: 18650 cgaggagctaaaaaggcagtgccgcaag 18623
>ref|NM_001073305.1| Oryza sativa (japonica cultivar-group) Os12g0481400 (Os12g0481400) mRNA, complete cds Length = 4515 Score = 61.9 bits (31), Expect = 9e-06 Identities = 73/87 (83%) Strand = Plus / Plus Query: 112 ctcctctcttcctcccttaccagattaagctttggggggaacgaagaggtggagcgcttc 171 ||||||||||||||||| |||| |||| | || | | ||||| ||||||||| ||||| Sbjct: 4033 ctcctctcttcctccctaaccaaattagtccttagttgcaacgatgaggtggagtgcttc 4092 Query: 172 acagaggagcacgaggaggcccttcac 198 ||| ||||||| ||| ||||||||||| Sbjct: 4093 acaaaggagcaagagaaggcccttcac 4119
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0652A05 Length = 150455 Score = 61.9 bits (31), Expect = 9e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 354 agcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 ||||| ||||| |||||||||||||||||| |||||||||| ||| |||| ||| |||| Sbjct: 38124 agcgaagagctcaaaaggcagtgccgcaagctaaaaggaacaattgcaatcatcgaaga 38066
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502H06 Length = 165630 Score = 61.9 bits (31), Expect = 9e-06 Identities = 52/59 (88%) Strand = Plus / Minus Query: 354 agcgaggagcttaaaaggcagtgccgcaagttaaaaggaaccattccaataatcaaaga 412 ||||| ||||| |||||||||||||||||| |||||||||| ||| |||| ||| |||| Sbjct: 146461 agcgaagagctcaaaaggcagtgccgcaagctaaaaggaacaattgcaatcatcgaaga 146403
>emb|AJ234549.1|HVU234549 Hordeum vulgare genomic DNA fragment; clone MWG0634.rev Length = 275 Score = 50.1 bits (25), Expect = 0.036 Identities = 28/29 (96%) Strand = Plus / Plus Query: 369 aggcagtgccgcaagttaaaaggaaccat 397 ||||||||||||||||||| ||||||||| Sbjct: 109 aggcagtgccgcaagttaagaggaaccat 137
>emb|AJ632303.1| Sus scrofa partial ICAM3 gene, TYK2, CDC37, PDE4A, KEAP1, EDG8 and APG4D genes and partial FLJ12949 gene Length = 185331 Score = 46.1 bits (23), Expect = 0.56 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1454 tagtatccatgaatgcaggttca 1476 ||||||||||||||||||||||| Sbjct: 157085 tagtatccatgaatgcaggttca 157063
>gb|AC186347.2| Gallus gallus BAC clone CH261-168O1 from chromosome z, complete sequence Length = 203501 Score = 44.1 bits (22), Expect = 2.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1400 aagctttgtttggttcaagcagtctt 1425 |||||||||||||||| ||||||||| Sbjct: 162752 aagctttgtttggttctagcagtctt 162777
>gb|AC115906.6| Mus musculus chromosome 8, clone RP24-476M14, complete sequence Length = 145246 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1692 ttcagtgccacagttactctgg 1713 |||||||||||||||||||||| Sbjct: 84601 ttcagtgccacagttactctgg 84580
>gb|AC099690.8| Mus musculus chromosome 8, clone RP23-73E9, complete sequence Length = 225655 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1692 ttcagtgccacagttactctgg 1713 |||||||||||||||||||||| Sbjct: 17943 ttcagtgccacagttactctgg 17922
>gb|AC099804.3| Homo sapiens chromosome 17, clone CTD-2357A8, complete sequence Length = 119922 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 176 aggagcacgaggaggcccttca 197 |||||||||||||||||||||| Sbjct: 63133 aggagcacgaggaggcccttca 63154
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 agaggtggagcgcttcacagaggagcacgaggaggcccttcacctcctca 205 ||||||| | ||||||||| | || || |||||||||||||| ||||||| Sbjct: 2195084 agaggtgaaacgcttcacaaatgaacaagaggaggcccttcagctcctca 2195035
>emb|BX855618.7| Zebrafish DNA sequence from clone CH211-69H5 in linkage group 4, complete sequence Length = 127818 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2045 ttgtggaggagcataatgatat 2066 |||||||||||||||||||||| Sbjct: 106311 ttgtggaggagcataatgatat 106290
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 44.1 bits (22), Expect = 2.2 Identities = 43/50 (86%) Strand = Plus / Minus Query: 156 agaggtggagcgcttcacagaggagcacgaggaggcccttcacctcctca 205 ||||||| | ||||||||| | || || |||||||||||||| ||||||| Sbjct: 62986 agaggtgaaacgcttcacaaatgaacaagaggaggcccttcagctcctca 62937
>gb|AF466204.1| Sorghum bicolor clone SBTXS_0045I19, partial sequence Length = 77973 Score = 44.1 bits (22), Expect = 2.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1091 taattgactaggattagtttcc 1112 |||||||||||||||||||||| Sbjct: 48412 taattgactaggattagtttcc 48391
>gb|AC166602.2| Eulemur macaco macaco clone CH273-138L3, complete sequence Length = 172515 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1651 attgacgttttcttcacaaaggaaa 1675 |||||| |||||||||||||||||| Sbjct: 161212 attgactttttcttcacaaaggaaa 161188
>ref|XM_001180340.1| PREDICTED: Strongylocentrotus purpuratus similar to CAMP responsive element binding protein 3-like 3 (LOC585495), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agactcctctcttcctccctt 129 ||||||||||||||||||||| Sbjct: 808 agactcctctcttcctccctt 788
>ref|XM_785319.2| PREDICTED: Strongylocentrotus purpuratus similar to CAMP responsive element binding protein 3-like 3 (LOC585495), mRNA Length = 1487 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 agactcctctcttcctccctt 129 ||||||||||||||||||||| Sbjct: 808 agactcctctcttcctccctt 788
>gb|AC147910.2| Xenopus tropicalis clone CH216-82H14, complete sequence Length = 136191 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 835 actttatggaaggtgtttgtg 855 ||||||||||||||||||||| Sbjct: 22448 actttatggaaggtgtttgtg 22468
>gb|AC152830.2| Ornithorhynchus anatinus BAC clone OABb-207A1 from chromosome unknown, complete sequence Length = 132350 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 36 tccttcctcttcatccaaact 56 ||||||||||||||||||||| Sbjct: 97333 tccttcctcttcatccaaact 97353
>emb|CT030143.4| Zebrafish DNA sequence from clone CH73-68F17 in linkage group 7, complete sequence Length = 41471 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 889 aaataactgtgtaggggtgtttccc 913 |||||| |||||||||||||||||| Sbjct: 7500 aaataagtgtgtaggggtgtttccc 7476
>gb|AC004763.1| Homo sapiens chromosome 5, P1 clone 854b11 (LBNL H44), complete sequence Length = 87050 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1208 gagaaatacaggggcatgtct 1228 ||||||||||||||||||||| Sbjct: 58297 gagaaatacaggggcatgtct 58317 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gagaaatacaggggcatgtct 1294 ||||||||||||||||||||| Sbjct: 58297 gagaaatacaggggcatgtct 58317
>gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete sequence Length = 176651 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 835 actttatggaaggtgtttgtg 855 ||||||||||||||||||||| Sbjct: 80952 actttatggaaggtgtttgtg 80972
>gb|AC124698.4| Mus musculus BAC clone RP24-180F7 from chromosome 3, complete sequence Length = 164187 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 ctcctcaattctctccagaca 219 ||||||||||||||||||||| Sbjct: 76176 ctcctcaattctctccagaca 76196
>gb|AC162922.4| Mus musculus BAC clone RP23-314M6 from chromosome 3, complete sequence Length = 245207 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 199 ctcctcaattctctccagaca 219 ||||||||||||||||||||| Sbjct: 49819 ctcctcaattctctccagaca 49839
>gb|AC084701.5| Homo sapiens chromosome 18, clone RP11-1005F9, complete sequence Length = 140712 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 862 ttttatcttctttcagtaaaa 882 ||||||||||||||||||||| Sbjct: 35796 ttttatcttctttcagtaaaa 35816
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence Length = 191674 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccttcctcttcatccaaact 56 ||||||||||||||||||||| Sbjct: 90207 tccttcctcttcatccaaact 90187
>gb|AC027104.6| Homo sapiens chromosome 15, clone RP11-326L17, complete sequence Length = 180202 Score = 42.1 bits (21), Expect = 8.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 387 aaaggaaccattccaataatcaaagacta 415 |||||||||||||||||||| | |||||| Sbjct: 74606 aaaggaaccattccaataatgatagacta 74634
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1658 ttttcttcacaaaggaaaatg 1678 ||||||||||||||||||||| Sbjct: 17471529 ttttcttcacaaaggaaaatg 17471509
>emb|AL441883.11| Human DNA sequence from clone RP1-223E5 on chromosome 6 Contains the SIRT5 gene for sirtuin silent mating type information regulation 2 homolog 5 (S. cerevisiae), the gene for retinoic acid repressible protein (RARG-1), the 3' end of the RANBP9 gene for RAN binding protein 9 (RanBPM) and two CpG islands, complete sequence Length = 63952 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1659 tttcttcacaaaggaaaatga 1679 ||||||||||||||||||||| Sbjct: 59815 tttcttcacaaaggaaaatga 59835
>gb|AC013660.9| Homo sapiens, clone RP11-20A14, complete sequence Length = 164324 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 862 ttttatcttctttcagtaaaa 882 ||||||||||||||||||||| Sbjct: 59575 ttttatcttctttcagtaaaa 59555
>emb|AL691468.12| Mouse DNA sequence from clone RP23-20K13 on chromosome 4 Contains the 3' end of a novel gene (4933412J03Rik), a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the Tnfsf15 gene for tumor necrosis factor (ligand) superfamily member 15 and the 3' end of the Tnfsf8 for tumor necrosis factor (ligand) superfamily member 8, complete sequence Length = 212420 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 457 gttgtagaagtgctgttatccttga 481 ||||||||||||||||||| ||||| Sbjct: 179739 gttgtagaagtgctgttatgcttga 179715
>gb|AC160932.3| Mus musculus BAC clone RP24-275L14 from chromosome 12, complete sequence Length = 177886 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 877 gtaaaaggttaaaaataactgtgta 901 |||||||||||||||||||| |||| Sbjct: 116038 gtaaaaggttaaaaataactttgta 116062
>emb|CR559929.5| Zebrafish DNA sequence from clone CH211-235A10 in linkage group 13, complete sequence Length = 59815 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1013 cattatgtgagttttgtgtgg 1033 ||||||||||||||||||||| Sbjct: 16339 cattatgtgagttttgtgtgg 16319
>gb|AC123542.4| Lemur catta clone LB2-136L13, complete sequence Length = 158703 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1651 attgacgttttcttcacaaaggaaa 1675 |||||| |||||||||||||||||| Sbjct: 106791 attgactttttcttcacaaaggaaa 106767
>dbj|AP004999.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0040H05 Length = 172623 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1658 ttttcttcacaaaggaaaatg 1678 ||||||||||||||||||||| Sbjct: 83526 ttttcttcacaaaggaaaatg 83506
>gb|AC079112.4| Homo sapiens BAC clone RP11-67K11 from 2, complete sequence Length = 155888 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 tcctctcttcctcccttacca 133 ||||||||||||||||||||| Sbjct: 125110 tcctctcttcctcccttacca 125130
>emb|BX571791.6| Mouse DNA sequence from clone RP23-297D10 on chromosome X, complete sequence Length = 10721 Score = 42.1 bits (21), Expect = 8.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 247 caagttctctgcaagaactagagat 271 |||||||||||||||||| |||||| Sbjct: 3563 caagttctctgcaagaacaagagat 3539
>ref|XM_562282.1| Anopheles gambiae str. PEST ENSANGP00000025910 (ENSANGG00000022585), partial mRNA Length = 675 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 ttcttatggacttggagatct 589 ||||||||||||||||||||| Sbjct: 483 ttcttatggacttggagatct 503
>gb|AC002428.1|AC002428 Human BAC clone GS1-39E22 from 5q31, complete sequence Length = 143875 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1208 gagaaatacaggggcatgtct 1228 ||||||||||||||||||||| Sbjct: 118440 gagaaatacaggggcatgtct 118460 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1274 gagaaatacaggggcatgtct 1294 ||||||||||||||||||||| Sbjct: 118440 gagaaatacaggggcatgtct 118460
>gb|AC087780.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-324b17, complete sequence Length = 206924 Score = 42.1 bits (21), Expect = 8.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 108 cagactcctctcttcctccct 128 ||||||||||||||||||||| Sbjct: 95352 cagactcctctcttcctccct 95372 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 378,423,087 Number of extensions: 20732661 Number of successful extensions: 116072 Number of sequences better than 10.0: 57 Number of HSP's gapped: 116055 Number of HSP's successfully gapped: 102 Length of query: 2302 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2279 Effective length of database: 18,503,978,556 Effective search space: 42170567129124 Effective search space used: 42170567129124 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)