No.
Definition
Score (bits)
E Value
1 ref|NM_001058596.1| Oryza sativa (japonica cultivar-group) Os04g...
539
e-150
2 dbj|AK102071.1| Oryza sativa (japonica cultivar-group) cDNA clon...
531
e-147
3 gb|AY620407.1| Zea mays arginine/serine-rich splicing factor 2 m...
291
3e-75
4 gb|AY109687.1| Zea mays CL45878_1 mRNA sequence
291
3e-75
5 gb|AY620409.1| Zea mays arginine/serine-rich splicing factor 2 v...
289
1e-74
6 gb|DQ246007.1| Zea mays clone 94519 mRNA sequence
283
7e-73
7 gb|AY620402.1| Zea mays arginine/serine-rich splicing factor 1 m...
283
7e-73
8 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
204
5e-49
9 emb|AL606450.3|OSJN00001 Oryza sativa genomic DNA, chromosome 4,...
204
5e-49
10 gb|AY620410.1| Zea mays arginine/serine-rich splicing factor 2 v...
153
2e-33
11 gb|AY620408.1| Zea mays arginine/serine-rich splicing factor 2 v...
153
2e-33
12 gb|AY616024.1| Zea mays arginine/serine-rich splicing factor 2 (...
153
2e-33
13 gb|AY620405.1| Zea mays arginine/serine-rich splicing factor 1 v...
147
1e-31
14 gb|AY620404.1| Zea mays arginine/serine-rich splicing factor 1 v...
145
4e-31
15 gb|AY620403.1| Zea mays arginine/serine-rich splicing factor 1 v...
145
4e-31
16 gb|AY616013.1| Zea mays arginine/serine-rich splicing factor 1 (...
145
4e-31
17 gb|AY620406.1| Zea mays arginine/serine-rich splicing factor 1 v...
143
2e-30
18 emb|CR855039.1| Oryza sativa genomic DNA, chromosome 4, BAC clon...
96
3e-16
19 ref|NM_001052264.1| Oryza sativa (japonica cultivar-group) Os02g...
64
1e-06
20 dbj|AK121372.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
1e-06
21 ref|NM_116051.2| Arabidopsis thaliana ATRSP31; RNA binding / nuc...
58
7e-05
22 gb|AY125565.1| Arabidopsis thaliana AT3g61860/F21F14_30 mRNA, co...
58
7e-05
23 gb|AF439831.1|AF439831 Arabidopsis thaliana AT3g61860/F21F14_30 ...
58
7e-05
24 emb|X99435.1|ATRSP31 A.thaliana mRNA for arginine/serine-rich sp...
58
7e-05
25 emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, B...
56
3e-04
26 emb|BX823950.1|CNS0A6JH Arabidopsis thaliana Full-length cDNA Co...
56
3e-04
27 emb|BX823547.1|CNS0A6LF Arabidopsis thaliana Full-length cDNA Co...
56
3e-04
28 emb|BX822079.1|CNS0A4WZ Arabidopsis thaliana Full-length cDNA Co...
56
3e-04
29 gb|AC125053.4| Mus musculus BAC clone RP23-389L19 from chromosom...
54
0.001
30 gb|AC157943.2| Mus musculus BAC clone RP23-467N13 from chromosom...
54
0.001
31 emb|AJ271474.1|EGU271474 Elaeis guineensis partial mRNA for puta...
54
0.001
32 gb|AF098994.1| Caenorhabditis elegans cosmid T06A4, complete seq...
54
0.001
33 gb|AF016682.2| Caenorhabditis elegans cosmid T07D3, complete seq...
52
0.005
34 gb|AF043698.2| Caenorhabditis elegans cosmid C54G6, complete seq...
52
0.005
35 gb|AC131107.3| Mus musculus BAC clone RP23-339P15 from chromosom...
52
0.005
36 gb|AC131104.3| Mus musculus BAC clone RP23-245G19 from chromosom...
52
0.005
37 gb|AC124757.4| Mus musculus BAC clone RP23-116P5 from 8, complet...
52
0.005
38 gb|AF106584.1| Caenorhabditis elegans cosmid F54A5, complete seq...
52
0.005
39 gb|AC107765.9| Mus musculus chromosome 17, clone RP23-166P7, com...
52
0.005
40 emb|Z78411.2|CEF02D8 Caenorhabditis elegans Cosmid F02D8, comple...
52
0.005
41 emb|Z81567.1|CEK08C9 Caenorhabditis elegans Cosmid K08C9, comple...
52
0.005
42 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.005
43 gb|AC134845.5| Mus musculus BAC clone RP24-424K5 from chromosome...
52
0.005
44 emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chr...
52
0.005
45 dbj|AP004885.3| Oryza sativa (japonica cultivar-group) genomic D...
52
0.005
46 dbj|AK065148.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.005
47 gb|AC147256.3| Mus musculus BAC clone RP24-147G24 from 12, compl...
52
0.005
48 emb|CT828302.1| Oryza sativa (indica cultivar-group) cDNA clone:...
50
0.018
49 gb|AC147986.3| Mus musculus BAC clone RP24-404L1 from 5, complet...
50
0.018
50 gb|AC147987.5| Mus musculus BAC clone RP24-456B4 from 5, complet...
50
0.018
51 emb|AL844888.12| Mouse DNA sequence from clone RP23-193F18 on ch...
50
0.018
52 gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete s...
48
0.071
53 gb|BT017345.1| Zea mays clone EL01N0323C10.c mRNA sequence
48
0.071
54 gb|AC007575.10| Drosophila melanogaster, chromosome 3R, region 8...
48
0.071
55 gb|AC007532.8| Drosophila melanogaster, chromosome 3R, region 82...
48
0.071
56 dbj|AK062255.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.071
57 gb|AY107469.1| Zea mays PCO065052 mRNA sequence
48
0.071
58 gb|AC161799.5| Mus musculus chromosome 15, clone RP23-304B13, co...
46
0.28
59 gb|AY435408.1| Prunus persica microsatellite pchgms59 sequence
46
0.28
60 emb|AL808117.6| Mouse DNA sequence from clone RP23-240N3 on chro...
46
0.28
61 ref|XM_363223.1| Magnaporthe grisea 70-15 hypothetical protein (...
44
1.1
62 gb|DQ493953.1| Magnaporthe grisea 70-15 clone 50E08 telomere reg...
44
1.1
63 gb|DQ493945.1| Magnaporthe grisea 70-15 clone 13H23 telomere reg...
44
1.1
64 ref|XM_964348.1| PREDICTED: Tribolium castaneum similar to SH2 d...
44
1.1
65 dbj|AK084904.1| Mus musculus 13 days embryo lung cDNA, RIKEN ful...
44
1.1
66 emb|CR956405.10| Pig DNA sequence from clone CH242-240K6 on chro...
44
1.1
67 gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 ma...
44
1.1
68 gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map...
44
1.1
69 dbj|AB121692.1| Mus musculus peptidylarginine deiminase gene clu...
44
1.1
70 gb|AC007165.4| Homo sapiens BAC clone RP11-451C2 from 2, complet...
44
1.1
71 gb|AY107216.1| Zea mays PCO114058 mRNA sequence
44
1.1
72 emb|AL807805.7| Mouse DNA sequence from clone RP23-48K5 on chrom...
44
1.1
73 gb|CP000192.2| Drosophila melanogaster genomic scaffold 21100002...
42
4.4
74 ref|NM_130226.2| Arabidopsis thaliana RNA binding / nucleic acid...
42
4.4
75 ref|NM_201973.1| Arabidopsis thaliana RNA binding / nucleic acid...
42
4.4
76 gb|AC166156.4| Mus musculus BAC clone RP24-274H19 from chromosom...
42
4.4
77 ref|XM_589319.2| PREDICTED: Bos taurus similar to olfactory rece...
42
4.4
78 gb|AC164958.3| Mus musculus BAC clone RP23-359G24 from chromosom...
42
4.4
79 gb|AC121968.3| Mus musculus BAC clone RP24-272N4 from chromosome...
42
4.4
80 gb|AC124572.4| Mus musculus BAC clone RP23-159A20 from 12, compl...
42
4.4
81 gb|BT000995.1| Arabidopsis thaliana clone U18735 putative argini...
42
4.4
82 gb|AF469141.1| Notropis calientis isolate Ncal3666 cytochrome b ...
42
4.4
83 ref|XM_817268.1| Trypanosoma brucei TREU927 serine carboxypeptid...
42
4.4
84 gb|AC105336.14| Mus musculus chromosome 3, clone RP24-277J22, co...
42
4.4
85 gb|AY065237.1| Arabidopsis thaliana putative arginine/serine-ric...
42
4.4
86 gb|AC006418.4| Arabidopsis thaliana chromosome 2 clone F13A10 ma...
42
4.4
87 emb|BX511126.10| Zebrafish DNA sequence from clone CH211-244A17 ...
42
4.4
88 ref|XM_690778.1| PREDICTED: Danio rerio similar to splicing fact...
42
4.4
89 emb|AL359377.18| Human DNA sequence from clone RP11-96C4 on chro...
42
4.4
90 emb|BX323079.7| Zebrafish DNA sequence from clone DKEYP-113D7 in...
42
4.4
91 emb|BX571657.1| Wolinella succinogenes, complete genome; segment...
42
4.4
92 emb|AL662909.9| Mouse DNA sequence from clone RP23-189I13 on chr...
42
4.4
93 gb|AC097662.5| Homo sapiens BAC clone RP11-563C6 from 2, complet...
42
4.4
94 dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
42
4.4
95 emb|BX820508.1|CNS0A9OP Arabidopsis thaliana Full-length cDNA Co...
42
4.4
96 emb|BX820396.1|CNS0A9MC Arabidopsis thaliana Full-length cDNA Co...
42
4.4
97 gb|AE015924.1| Porphyromonas gingivalis W83, complete genome
42
4.4
98 gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge...
42
4.4
>dbj|AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
Length = 35498469
Score = 204 bits (103), Expect = 5e-49
Identities = 184/211 (87%)
Strand = Plus / Minus
Query: 421 cgtgatggctatagtaaaccaccagtgaatactaagcccaccaagacactgtttgtaatt 480
|||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||| |||
Sbjct: 1110404 cgtgatggctatagcaaaccacctgtgaatactaaacccacgaagacactatttgtcatt 1110345
Query: 481 aactttgacccaatcaacacaagagtcagtgatcttgaacggcattttggtccatttggg 540
||||||||||| |||||||| ||||||| |||| | ||| ||||||| | ||||||||
Sbjct: 1110344 aactttgaccccatcaacaccagagtcactgatatcgaaaggcatttcgaaccatttgga 1110285
Query: 541 aggatttcaaatgttcggataaggaagaactttgcttttgtgcaatttgaaactcaggaa 600
| | |||| ||||||||||| |||| |||||||||||||||||| |||||||| ||||||
Sbjct: 1110284 aagctttcgaatgttcggatcaggaggaactttgcttttgtgcagtttgaaacacaggaa 1110225
Query: 601 gaagcctcaaaagcactagatgctactcatt 631
|| ||| |||||||||| || ||||||||||
Sbjct: 1110224 gaggccacaaaagcacttgaagctactcatt 1110194
Score = 178 bits (90), Expect = 3e-41
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 168 ggcggagatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagct 227
|||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 1111852 ggcgaagatgaggcccgtgttcgtggggaacctcgactacgacacccgccactccgagct 1111793
Query: 228 cgaccacctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
||||| ||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 1111792 cgaccgcctcttctaccgctacggcaggatcgaccgcatcgacatgaagtcagg 1111739
Score = 135 bits (68), Expect = 4e-28
Identities = 101/112 (90%)
Strand = Plus / Minus
Query: 283 tttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggat 342
|||||||||||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 1110678 tttgcttttgtctactttgaggatgagcgtgatggtgatgaggccatacgagcccttgat 1110619
Query: 343 ggttatccctttggcccagggagacgcagactttcagtggagtggtcacggg 394
|| ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 1110618 ggctatccttttggccctgggaggcgcaggctttcggtggagtggtcacggg 1110567
Score = 95.6 bits (48), Expect = 3e-16
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaaccaggtgacaagt 703
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 1108630 tggacagggtgatttctgttgagtatgccttcagggatgatacagaacgaggtgacaggt 1108571
Query: 704 atga 707
||||
Sbjct: 1108570 atga 1108567
Score = 56.0 bits (28), Expect = 3e-04
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 880 agccgatctcctgtccagcgctcaagatccccagctcccaacagaaggggttatga 935
|||||||||||||||| ||| |||||||||||| | |||||||||| | ||||||
Sbjct: 1108035 agccgatctcctgtccggcgatcaagatccccacttgccaacagaagagcttatga 1107980
Score = 50.1 bits (25), Expect = 0.018
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand = Plus / Minus
Query: 727 ggtggttatggaaggcaggatgacagttcatatcgccgttctgttagcccagtgtaccga 786
||||| ||||| |||| ||||| ||| ||||||| || || ||||| |||||||||
Sbjct: 1108556 ggtggctatggtaggcgagatgatagtccatatcgtcgatcagttagtccagtgtac--- 1108500
Query: 787 aggtcacgacctagtcctgactatggtcgtc 817
|||||||| || ||||||||||| |||||||
Sbjct: 1108499 aggtcacgcccaagtcctgactacggtcgtc 1108469
>emb|AL606450.3 |OSJN00001 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020P07,
complete sequence
Length = 167895
Score = 204 bits (103), Expect = 5e-49
Identities = 184/211 (87%)
Strand = Plus / Minus
Query: 421 cgtgatggctatagtaaaccaccagtgaatactaagcccaccaagacactgtttgtaatt 480
|||||||||||||| |||||||| ||||||||||| ||||| |||||||| ||||| |||
Sbjct: 52786 cgtgatggctatagcaaaccacctgtgaatactaaacccacgaagacactatttgtcatt 52727
Query: 481 aactttgacccaatcaacacaagagtcagtgatcttgaacggcattttggtccatttggg 540
||||||||||| |||||||| ||||||| |||| | ||| ||||||| | ||||||||
Sbjct: 52726 aactttgaccccatcaacaccagagtcactgatatcgaaaggcatttcgaaccatttgga 52667
Query: 541 aggatttcaaatgttcggataaggaagaactttgcttttgtgcaatttgaaactcaggaa 600
| | |||| ||||||||||| |||| |||||||||||||||||| |||||||| ||||||
Sbjct: 52666 aagctttcgaatgttcggatcaggaggaactttgcttttgtgcagtttgaaacacaggaa 52607
Query: 601 gaagcctcaaaagcactagatgctactcatt 631
|| ||| |||||||||| || ||||||||||
Sbjct: 52606 gaggccacaaaagcacttgaagctactcatt 52576
Score = 178 bits (90), Expect = 3e-41
Identities = 108/114 (94%)
Strand = Plus / Minus
Query: 168 ggcggagatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagct 227
|||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 54234 ggcgaagatgaggcccgtgttcgtggggaacctcgactacgacacccgccactccgagct 54175
Query: 228 cgaccacctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
||||| ||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 54174 cgaccgcctcttctaccgctacggcaggatcgaccgcatcgacatgaagtcagg 54121
Score = 135 bits (68), Expect = 4e-28
Identities = 101/112 (90%)
Strand = Plus / Minus
Query: 283 tttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggat 342
|||||||||||||||||||||||||| |||||||||||||| |||||||| || || |||
Sbjct: 53060 tttgcttttgtctactttgaggatgagcgtgatggtgatgaggccatacgagcccttgat 53001
Query: 343 ggttatccctttggcccagggagacgcagactttcagtggagtggtcacggg 394
|| ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||
Sbjct: 53000 ggctatccttttggccctgggaggcgcaggctttcggtggagtggtcacggg 52949
Score = 95.6 bits (48), Expect = 3e-16
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaaccaggtgacaagt 703
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 51012 tggacagggtgatttctgttgagtatgccttcagggatgatacagaacgaggtgacaggt 50953
Query: 704 atga 707
||||
Sbjct: 50952 atga 50949
Score = 56.0 bits (28), Expect = 3e-04
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 880 agccgatctcctgtccagcgctcaagatccccagctcccaacagaaggggttatga 935
|||||||||||||||| ||| |||||||||||| | |||||||||| | ||||||
Sbjct: 50417 agccgatctcctgtccggcgatcaagatccccacttgccaacagaagagcttatga 50362
Score = 50.1 bits (25), Expect = 0.018
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand = Plus / Minus
Query: 727 ggtggttatggaaggcaggatgacagttcatatcgccgttctgttagcccagtgtaccga 786
||||| ||||| |||| ||||| ||| ||||||| || || ||||| |||||||||
Sbjct: 50938 ggtggctatggtaggcgagatgatagtccatatcgtcgatcagttagtccagtgtac--- 50882
Query: 787 aggtcacgacctagtcctgactatggtcgtc 817
|||||||| || ||||||||||| |||||||
Sbjct: 50881 aggtcacgcccaagtcctgactacggtcgtc 50851
>gb|AY620410.1 | Zea mays arginine/serine-rich splicing factor 2 variant 3 mRNA,
complete cds, alternatively spliced
Length = 1543
Score = 153 bits (77), Expect = 2e-33
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 33 agatgaggccggtcttcgtggggaacctggactatgacacccgccactcggagctcgacc 92
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||||||||| || | ||||||||||| ||||||||
Sbjct: 93 gcctcttctaccgctacggcagggtcgagcgcatcgacatcaagtcagg 141
Score = 149 bits (75), Expect = 3e-32
Identities = 102/111 (91%)
Strand = Plus / Plus
Query: 285 tgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggatgg 344
||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 773 tgcttttgtctactttgaggatgaacgtgatggcaatgatgctatacgggctcttgatgg 832
Query: 345 ttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
|||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 833 ttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 883
Score = 131 bits (66), Expect = 6e-27
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || | |||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 924 aatactaagccaactaggacactgtttgtcattaactttgatccaatgaacacaagagtc 983
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
||||| | ||| |||| || |||||||||| || |||| ||||||||||||||||
Sbjct: 984 agtgacatcgaaaggcacttcacaccatttgggaacatatcaagtgttcggataaggaag 1043
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagc 605
|||||||||||||| || ||||||||| |||||||||
Sbjct: 1044 aactttgcttttgttcagtttgaaactatggaagaagc 1081
Score = 77.8 bits (39), Expect = 8e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaa 690
||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 1120 tggacagggtgatttctgtcgagtacgccttcagggatgatagtgaa 1166
Score = 48.1 bits (24), Expect = 0.071
Identities = 44/50 (88%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 771 tagcccagtgtaccgaaggtcacgacctagtcctgactatggtcgtccag 820
||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 1223 tagcccagtgtaccg---gtcacgtcctagtccagactatggtcgcccag 1269
>gb|AY620408.1 | Zea mays arginine/serine-rich splicing factor 2 variant 1 mRNA,
complete cds, alternatively spliced
Length = 1294
Score = 153 bits (77), Expect = 2e-33
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 33 agatgaggccggtcttcgtggggaacctggactatgacacccgccactcggagctcgacc 92
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||||||||| || | ||||||||||| ||||||||
Sbjct: 93 gcctcttctaccgctacggcagggtcgagcgcatcgacatcaagtcagg 141
Score = 149 bits (75), Expect = 3e-32
Identities = 102/111 (91%)
Strand = Plus / Plus
Query: 285 tgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggatgg 344
||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 524 tgcttttgtctactttgaggatgaacgtgatggcaatgatgctatacgggctcttgatgg 583
Query: 345 ttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
|||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 584 ttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 634
Score = 131 bits (66), Expect = 6e-27
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || | |||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 675 aatactaagccaactaggacactgtttgtcattaactttgatccaatgaacacaagagtc 734
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
||||| | ||| |||| || |||||||||| || |||| ||||||||||||||||
Sbjct: 735 agtgacatcgaaaggcacttcacaccatttgggaacatatcaagtgttcggataaggaag 794
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagc 605
|||||||||||||| || ||||||||| |||||||||
Sbjct: 795 aactttgcttttgttcagtttgaaactatggaagaagc 832
Score = 77.8 bits (39), Expect = 8e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaa 690
||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 871 tggacagggtgatttctgtcgagtacgccttcagggatgatagtgaa 917
Score = 48.1 bits (24), Expect = 0.071
Identities = 44/50 (88%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 771 tagcccagtgtaccgaaggtcacgacctagtcctgactatggtcgtccag 820
||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 974 tagcccagtgtaccg---gtcacgtcctagtccagactatggtcgcccag 1020
>gb|AY616024.1 | Zea mays arginine/serine-rich splicing factor 2 (SRP2) gene,
complete cds, alternatively spliced
Length = 3034
Score = 153 bits (77), Expect = 2e-33
Identities = 101/109 (92%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 135 agatgaggccggtcttcgtggggaacctggactatgacacccgccactcggagctcgacc 194
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||||||||| || | ||||||||||| ||||||||
Sbjct: 195 gcctcttctaccgctacggcagggtcgagcgcatcgacatcaagtcagg 243
Score = 149 bits (75), Expect = 3e-32
Identities = 102/111 (91%)
Strand = Plus / Plus
Query: 285 tgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggatgg 344
||||||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||
Sbjct: 1082 tgcttttgtctactttgaggatgaacgtgatggcaatgatgctatacgggctcttgatgg 1141
Query: 345 ttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
|||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 1142 ttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 1192
Score = 131 bits (66), Expect = 6e-27
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || | |||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct: 1555 aatactaagccaactaggacactgtttgtcattaactttgatccaatgaacacaagagtc 1614
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
||||| | ||| |||| || |||||||||| || |||| ||||||||||||||||
Sbjct: 1615 agtgacatcgaaaggcacttcacaccatttgggaacatatcaagtgttcggataaggaag 1674
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagc 605
|||||||||||||| || ||||||||| |||||||||
Sbjct: 1675 aactttgcttttgttcagtttgaaactatggaagaagc 1712
Score = 77.8 bits (39), Expect = 8e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaa 690
||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 2157 tggacagggtgatttctgtcgagtacgccttcagggatgatagtgaa 2203
Score = 48.1 bits (24), Expect = 0.071
Identities = 44/50 (88%), Gaps = 3/50 (6%)
Strand = Plus / Plus
Query: 771 tagcccagtgtaccgaaggtcacgacctagtcctgactatggtcgtccag 820
||||||||||||||| |||||| |||||||| ||||||||||| ||||
Sbjct: 2260 tagcccagtgtaccg---gtcacgtcctagtccagactatggtcgcccag 2306
>gb|AY620405.1 | Zea mays arginine/serine-rich splicing factor 1 variant 3 mRNA,
complete cds, alternatively spliced
Length = 1144
Score = 147 bits (74), Expect = 1e-31
Identities = 107/118 (90%)
Strand = Plus / Plus
Query: 278 cagggtttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctc 337
|||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct: 487 caggctttgcttttgtctactttgaggatgaacgtgatggcagtgatgccatacgtgctc 546
Query: 338 tggatggttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
| ||||||||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 547 ttgatggttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 604
Score = 143 bits (72), Expect = 2e-30
Identities = 99/108 (91%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 131 agatgaggccggttttcgtggggaacctagactatgatacccgccactcggagctcgacc 190
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcag 280
|||||||||||||||| |||||| || | |||||||||||||||||||
Sbjct: 191 acctcttctaccgctatggcagggtcgagcgcatcgacatgaagtcag 238
Score = 129 bits (65), Expect = 2e-26
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || || ||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 645 aatactaagccaactaaaacattgtttgtcattaactttgatccaatggacacaagagtc 704
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
|||||| | ||| | || |||| |||||||||| || |||| |||| |||||||||||
Sbjct: 705 agtgatatcgaaagacactttgcaccatttgggaacatatcaagtgttaggataaggaag 764
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagcctcaaaagcactagatgctact 627
|||||||||||||| | |||||||| | ||||||||| || || || || ||||||
Sbjct: 765 aactttgcttttgtccggtttgaaacactagaagaagcccgtaaggctcttgaagctact 824
Query: 628 catttgacgaagttactggacagggtgatttctgttgagtatgccttcagggatgat 684
||| || | | | |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 825 catgctaccatgcttttggatagggtgatttctgttgagtatgcctttagggatgat 881
Score = 77.8 bits (39), Expect = 8e-11
Identities = 128/157 (81%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 790 tcacgacctagtcctgactatggtcgtccagtgagtcctcagtatggtgcatatggcagg 849
||||| |||||||| ||||||||||| |||| |||||| |||||| | |||||||||
Sbjct: 960 tcacgtcctagtccagactatggtcgcccagcaagtcctgtatatggttcgtatggcagg 1019
Query: 850 agcaggagtcctgtccgtgatcgctatcgaagccgatctcctgtccagcgctcaagatcc 909
||||| |||||||| ||||| |||||||| | ||||||||| | || |||||||||
Sbjct: 1020 agcagaagtcctgttcgtgaccgctatcgga---gatctcctgcttaccgatcaagatcc 1076
Query: 910 ccagctcccaacagaaggggttatgactaatcgagaa 946
||| || ||||| |||| | ||||||||||| ||||
Sbjct: 1077 ccacctgccaaccgaagagcatatgactaatcaagaa 1113
>gb|AY620404.1 | Zea mays arginine/serine-rich splicing factor 1 variant 2 mRNA,
complete cds, alternatively spliced
Length = 1243
Score = 145 bits (73), Expect = 4e-31
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 131 agatgaggccggttttcgtggggaacctagactatgatacccgccactcggagctcgacc 190
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||| |||||| || | ||||||||||||||||||||
Sbjct: 191 acctcttctaccgctatggcagggtcgagcgcatcgacatgaagtcagg 239
Score = 145 bits (73), Expect = 4e-31
Identities = 103/113 (91%)
Strand = Plus / Plus
Query: 283 tttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggat 342
||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 591 tttgcttttgtctactttgaggatgaacgtgatggcagtgatgccatacgtgctcttgat 650
Query: 343 ggttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
|||||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 651 ggttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 703
Score = 129 bits (65), Expect = 2e-26
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || || ||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 744 aatactaagccaactaaaacattgtttgtcattaactttgatccaatggacacaagagtc 803
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
|||||| | ||| | || |||| |||||||||| || |||| |||| |||||||||||
Sbjct: 804 agtgatatcgaaagacactttgcaccatttgggaacatatcaagtgttaggataaggaag 863
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagcctcaaaagcactagatgctact 627
|||||||||||||| | |||||||| | ||||||||| || || || || ||||||
Sbjct: 864 aactttgcttttgtccggtttgaaacactagaagaagcccgtaaggctcttgaagctact 923
Query: 628 catttgacgaagttactggacagggtgatttctgttgagtatgccttcagggatgat 684
||| || | | | |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 924 catgctaccatgcttttggatagggtgatttctgttgagtatgcctttagggatgat 980
Score = 77.8 bits (39), Expect = 8e-11
Identities = 128/157 (81%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 790 tcacgacctagtcctgactatggtcgtccagtgagtcctcagtatggtgcatatggcagg 849
||||| |||||||| ||||||||||| |||| |||||| |||||| | |||||||||
Sbjct: 1059 tcacgtcctagtccagactatggtcgcccagcaagtcctgtatatggttcgtatggcagg 1118
Query: 850 agcaggagtcctgtccgtgatcgctatcgaagccgatctcctgtccagcgctcaagatcc 909
||||| |||||||| ||||| |||||||| | ||||||||| | || |||||||||
Sbjct: 1119 agcagaagtcctgttcgtgaccgctatcgga---gatctcctgcttaccgatcaagatcc 1175
Query: 910 ccagctcccaacagaaggggttatgactaatcgagaa 946
||| || ||||| |||| | ||||||||||| ||||
Sbjct: 1176 ccacctgccaaccgaagagcatatgactaatcaagaa 1212
>gb|AY620403.1 | Zea mays arginine/serine-rich splicing factor 1 variant 1 mRNA,
complete cds, alternatively spliced
Length = 1408
Score = 145 bits (73), Expect = 4e-31
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 131 agatgaggccggttttcgtggggaacctagactatgatacccgccactcggagctcgacc 190
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||| |||||| || | ||||||||||||||||||||
Sbjct: 191 acctcttctaccgctatggcagggtcgagcgcatcgacatgaagtcagg 239
Score = 145 bits (73), Expect = 4e-31
Identities = 103/113 (91%)
Strand = Plus / Plus
Query: 283 tttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggat 342
||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 756 tttgcttttgtctactttgaggatgaacgtgatggcagtgatgccatacgtgctcttgat 815
Query: 343 ggttatccctttggcccagggagacgcagactttcagtggagtggtcacgggg 395
|||||||| |||||||| || |||||||| |||||||| ||||||||||||||
Sbjct: 816 ggttatccatttggccctggcagacgcaggctttcagtagagtggtcacgggg 868
Score = 129 bits (65), Expect = 2e-26
Identities = 194/237 (81%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || || ||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 909 aatactaagccaactaaaacattgtttgtcattaactttgatccaatggacacaagagtc 968
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
|||||| | ||| | || |||| |||||||||| || |||| |||| |||||||||||
Sbjct: 969 agtgatatcgaaagacactttgcaccatttgggaacatatcaagtgttaggataaggaag 1028
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagcctcaaaagcactagatgctact 627
|||||||||||||| | |||||||| | ||||||||| || || || || ||||||
Sbjct: 1029 aactttgcttttgtccggtttgaaacactagaagaagcccgtaaggctcttgaagctact 1088
Query: 628 catttgacgaagttactggacagggtgatttctgttgagtatgccttcagggatgat 684
||| || | | | |||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1089 catgctaccatgcttttggatagggtgatttctgttgagtatgcctttagggatgat 1145
Score = 77.8 bits (39), Expect = 8e-11
Identities = 128/157 (81%), Gaps = 3/157 (1%)
Strand = Plus / Plus
Query: 790 tcacgacctagtcctgactatggtcgtccagtgagtcctcagtatggtgcatatggcagg 849
||||| |||||||| ||||||||||| |||| |||||| |||||| | |||||||||
Sbjct: 1224 tcacgtcctagtccagactatggtcgcccagcaagtcctgtatatggttcgtatggcagg 1283
Query: 850 agcaggagtcctgtccgtgatcgctatcgaagccgatctcctgtccagcgctcaagatcc 909
||||| |||||||| ||||| |||||||| | ||||||||| | || |||||||||
Sbjct: 1284 agcagaagtcctgttcgtgaccgctatcgga---gatctcctgcttaccgatcaagatcc 1340
Query: 910 ccagctcccaacagaaggggttatgactaatcgagaa 946
||| || ||||| |||| | ||||||||||| ||||
Sbjct: 1341 ccacctgccaaccgaagagcatatgactaatcaagaa 1377
>gb|AY616013.1 | Zea mays arginine/serine-rich splicing factor 1 (SRP1) gene,
complete cds, alternatively spliced; and
arginine/serine-rich splicing factor 1 variant 4 (SRP1)
gene, partial cds
Length = 3835
Score = 145 bits (73), Expect = 4e-31
Identities = 100/109 (91%)
Strand = Plus / Plus
Query: 173 agatgaggcccgtgttcgtggggaacctggactacgacacccgccactcggagctcgacc 232
|||||||||| || |||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 131 agatgaggccggttttcgtggggaacctagactatgatacccgccactcggagctcgacc 190
Query: 233 acctcttctaccgctacggcaggatccaacgcatcgacatgaagtcagg 281
|||||||||||||||| |||||| || | ||||||||||||||||||||
Sbjct: 191 acctcttctaccgctatggcagggtcgagcgcatcgacatgaagtcagg 239
Score = 143 bits (72), Expect = 2e-30
Identities = 102/112 (91%)
Strand = Plus / Plus
Query: 283 tttgcttttgtctactttgaggatgaacgtgatggtgatgatgccatacgggctctggat 342
||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||
Sbjct: 1329 tttgcttttgtctactttgaggatgaacgtgatggcagtgatgccatacgtgctcttgat 1388
Query: 343 ggttatccctttggcccagggagacgcagactttcagtggagtggtcacggg 394
|||||||| |||||||| || |||||||| |||||||| |||||||||||||
Sbjct: 1389 ggttatccatttggccctggcagacgcaggctttcagtagagtggtcacggg 1440
Score = 109 bits (55), Expect = 2e-20
Identities = 133/159 (83%)
Strand = Plus / Plus
Query: 448 aatactaagcccaccaagacactgtttgtaattaactttgacccaatcaacacaagagtc 507
||||||||||| || || ||| ||||||| ||||||||||| ||||| |||||||||||
Sbjct: 1626 aatactaagccaactaaaacattgtttgtcattaactttgatccaatggacacaagagtc 1685
Query: 508 agtgatcttgaacggcattttggtccatttgggaggatttcaaatgttcggataaggaag 567
|||||| | ||| | || |||| |||||||||| || |||| |||| |||||||||||
Sbjct: 1686 agtgatatcgaaagacactttgcaccatttgggaacatatcaagtgttaggataaggaag 1745
Query: 568 aactttgcttttgtgcaatttgaaactcaggaagaagcc 606
|||||||||||||| | |||||||| | |||||||||
Sbjct: 1746 aactttgcttttgtccggtttgaaacactagaagaagcc 1784
Score = 73.8 bits (37), Expect = 1e-09
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 790 tcacgacctagtcctgactatggtcgtccagtgagtcctcagtatggtgcatatggcagg 849
||||| |||||||| ||||||||||| |||| |||||| |||||| | |||||||||
Sbjct: 2947 tcacgtcctagtccagactatggtcgcccagcaagtcctgtatatggttcgtatggcagg 3006
Query: 850 agcaggagtcctgtccgtgatcgctatcg 878
||||| |||||||| ||||| ||||||||
Sbjct: 3007 agcagaagtcctgttcgtgaccgctatcg 3035
Score = 65.9 bits (33), Expect = 3e-07
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgat 684
|||| |||||||||||||||||||||||||| |||||||||
Sbjct: 2828 tggatagggtgatttctgttgagtatgcctttagggatgat 2868
>emb|CR855039.1 | Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613H07, complete
sequence
Length = 78823
Score = 95.6 bits (48), Expect = 3e-16
Identities = 60/64 (93%)
Strand = Plus / Minus
Query: 644 tggacagggtgatttctgttgagtatgccttcagggatgatagtgaaccaggtgacaagt 703
|||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct: 78523 tggacagggtgatttctgttgagtatgccttcagggatgatacagaacgaggtgacaggt 78464
Query: 704 atga 707
||||
Sbjct: 78463 atga 78460
Score = 56.0 bits (28), Expect = 3e-04
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 880 agccgatctcctgtccagcgctcaagatccccagctcccaacagaaggggttatga 935
|||||||||||||||| ||| |||||||||||| | |||||||||| | ||||||
Sbjct: 77928 agccgatctcctgtccggcgatcaagatccccacttgccaacagaagagcttatga 77873
Score = 50.1 bits (25), Expect = 0.018
Identities = 75/91 (82%), Gaps = 3/91 (3%)
Strand = Plus / Minus
Query: 727 ggtggttatggaaggcaggatgacagttcatatcgccgttctgttagcccagtgtaccga 786
||||| ||||| |||| ||||| ||| ||||||| || || ||||| |||||||||
Sbjct: 78449 ggtggctatggtaggcgagatgatagtccatatcgtcgatcagttagtccagtgtac--- 78393
Query: 787 aggtcacgacctagtcctgactatggtcgtc 817
|||||||| || ||||||||||| |||||||
Sbjct: 78392 aggtcacgcccaagtcctgactacggtcgtc 78362
>gb|AF098994.1 | Caenorhabditis elegans cosmid T06A4, complete sequence
Length = 32053
Score = 54.0 bits (27), Expect = 0.001
Identities = 27/27 (100%)
Strand = Plus / Minus
Query: 86 gcctagacctagacctagacctagacc 112
|||||||||||||||||||||||||||
Sbjct: 6231 gcctagacctagacctagacctagacc 6205
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5960 cctagacctagacctagacctagacc 5935
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5966 cctagacctagacctagacctagacc 5941
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5972 cctagacctagacctagacctagacc 5947
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5978 cctagacctagacctagacctagacc 5953
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5984 cctagacctagacctagacctagacc 5959
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5990 cctagacctagacctagacctagacc 5965
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5996 cctagacctagacctagacctagacc 5971
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6002 cctagacctagacctagacctagacc 5977
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6008 cctagacctagacctagacctagacc 5983
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6014 cctagacctagacctagacctagacc 5989
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6020 cctagacctagacctagacctagacc 5995
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6026 cctagacctagacctagacctagacc 6001
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6032 cctagacctagacctagacctagacc 6007
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6038 cctagacctagacctagacctagacc 6013
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6044 cctagacctagacctagacctagacc 6019
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6074 cctagacctagacctagacctagacc 6049
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6080 cctagacctagacctagacctagacc 6055
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6086 cctagacctagacctagacctagacc 6061
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6092 cctagacctagacctagacctagacc 6067
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6098 cctagacctagacctagacctagacc 6073
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6134 cctagacctagacctagacctagacc 6109
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6140 cctagacctagacctagacctagacc 6115
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6146 cctagacctagacctagacctagacc 6121
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6182 cctagacctagacctagacctagacc 6157
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6188 cctagacctagacctagacctagacc 6163
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 6224 cctagacctagacctagacctagacc 6199
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagac 111
|||||||||||||||||||||||||
Sbjct: 5954 cctagacctagacctagacctagac 5930
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagac 111
|||||||||||||||||||||||||
Sbjct: 6128 cctagacctagacctagacctagac 6104
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 88 ctagacctagacctagacctagacc 112
|||||||||||||||||||||||||
Sbjct: 6151 ctagacctagacctagacctagacc 6127
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagac 111
|||||||||||||||||||||||||
Sbjct: 6218 cctagacctagacctagacctagac 6194
Score = 48.1 bits (24), Expect = 0.071
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 89 tagacctagacctagacctagacc 112
||||||||||||||||||||||||
Sbjct: 6102 tagacctagacctagacctagacc 6079
Score = 48.1 bits (24), Expect = 0.071
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctaga 110
||||||||||||||||||||||||
Sbjct: 6176 cctagacctagacctagacctaga 6153
Score = 48.1 bits (24), Expect = 0.071
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 89 tagacctagacctagacctagacc 112
||||||||||||||||||||||||
Sbjct: 6192 tagacctagacctagacctagacc 6169
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||| ||||||||||||
Sbjct: 5942 cctagacctagacttagacctagacc 5917
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||| ||||||
Sbjct: 5948 cctagacctagacctagacttagacc 5923
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||| |||||||||||||||||||||
Sbjct: 6050 cctaaacctagacctagacctagacc 6025
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||| |||||||||||||||
Sbjct: 6056 cctagacctaaacctagacctagacc 6031
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||| |||||||||
Sbjct: 6062 cctagacctagacctaaacctagacc 6037
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagaccta 108
||||||||||||||||||||||
Sbjct: 6068 cctagacctagacctagaccta 6047
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||| ||||||||||||||||||
Sbjct: 6110 cctagacatagacctagacctagacc 6085
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||| ||||||||||||
Sbjct: 6116 cctagacctagacatagacctagacc 6091
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||| ||||||
Sbjct: 6122 cctagacctagacctagacatagacc 6097
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||| |||||||||||||||||||
Sbjct: 6158 cctagatctagacctagacctagacc 6133
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||| |||||||||||||
Sbjct: 6164 cctagacctagatctagacctagacc 6139
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||||| |||||||
Sbjct: 6170 cctagacctagacctagatctagacc 6145
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||| ||||||||||||||||||
Sbjct: 6200 cctagacatagacctagacctagacc 6175
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||| ||||||||||||
Sbjct: 6206 cctagacctagacatagacctagacc 6181
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||| ||||||
Sbjct: 6212 cctagacctagacctagacatagacc 6187
>gb|AF016682.2 | Caenorhabditis elegans cosmid T07D3, complete sequence
Length = 33706
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5745 cctagacctagacctagacctagacc 5770
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5751 cctagacctagacctagacctagacc 5776
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5757 cctagacctagacctagacctagacc 5782
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5763 cctagacctagacctagacctagacc 5788
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5769 cctagacctagacctagacctagacc 5794
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5775 cctagacctagacctagacctagacc 5800
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 5805 cctagacctagacctagacctagacc 5830
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 ctagacctagacctagacctagacc 112
|||||||||||||||||||||||||
Sbjct: 5716 ctagacctagacctagacctagacc 5740
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 88 ctagacctagacctagacctagacc 112
|||||||||||||||||||||||||
Sbjct: 5872 ctagacctagacctagacctagacc 5896
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||| ||||
Sbjct: 5721 cctagacctagacctagacctggacc 5746
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||| ||||||||||
Sbjct: 5727 cctagacctagacctggacctagacc 5752
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||| ||||||||||||||||
Sbjct: 5733 cctagacctggacctagacctagacc 5758
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 91 gacctagacctagacctagacc 112
||||||||||||||||||||||
Sbjct: 5743 gacctagacctagacctagacc 5764
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagaccta 108
||||||||||||||||||||||
Sbjct: 5781 cctagacctagacctagaccta 5802
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||| |||||||||
Sbjct: 5787 cctagacctagacctaaacctagacc 5812
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||| |||||||||||||||
Sbjct: 5793 cctagacctaaacctagacctagacc 5818
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
|||| |||||||||||||||||||||
Sbjct: 5799 cctaaacctagacctagacctagacc 5824
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagaccta 108
||||||||||||||||||||||
Sbjct: 5811 cctagacctagacctagaccta 5832
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagaccta 108
||||||||||||||||||||||
Sbjct: 5877 cctagacctagacctagaccta 5898
>gb|AF043698.2 | Caenorhabditis elegans cosmid C54G6, complete sequence
Length = 27396
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 338 cctagacctagacctagacctagacc 313
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 344 cctagacctagacctagacctagacc 319
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 350 cctagacctagacctagacctagacc 325
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 356 cctagacctagacctagacctagacc 331
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 362 cctagacctagacctagacctagacc 337
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 392 cctagacctagacctagacctagacc 367
Score = 46.1 bits (23), Expect = 0.28
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 agacctagacctagacctagacc 112
|||||||||||||||||||||||
Sbjct: 365 agacctagacctagacctagacc 343
Score = 46.1 bits (23), Expect = 0.28
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 agacctagacctagacctagacc 112
|||||||||||||||||||||||
Sbjct: 395 agacctagacctagacctagacc 373
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||| |||||||||||||||||
Sbjct: 374 cctagaccaagacctagacctagacc 349
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||| |||||||||||
Sbjct: 380 cctagacctagaccaagacctagacc 355
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||||||| |||||
Sbjct: 386 cctagacctagacctagaccaagacc 361
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||| |||||||||||||||||
Sbjct: 404 cctagaccaagacctagacctagacc 379
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||| |||||||||||||
Sbjct: 422 cctagacctagaactagacctagacc 397
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||||| |||||||
Sbjct: 428 cctagacctagacctagaactagacc 403
Score = 42.1 bits (21), Expect = 4.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacct 107
|||||||||||||||||||||
Sbjct: 332 cctagacctagacctagacct 312
Score = 42.1 bits (21), Expect = 4.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 88 ctagacctagacctagacctagacc 112
||||||||||||| |||||||||||
Sbjct: 409 ctagacctagaccaagacctagacc 385
>gb|AC124757.4 | Mus musculus BAC clone RP23-116P5 from 8, complete sequence
Length = 210427
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99027 cctagacctagacctagacctagacc 99052
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99033 cctagacctagacctagacctagacc 99058
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99039 cctagacctagacctagacctagacc 99064
Score = 48.1 bits (24), Expect = 0.071
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 89 tagacctagacctagacctagacc 112
||||||||||||||||||||||||
Sbjct: 99023 tagacctagacctagacctagacc 99046
Score = 42.1 bits (21), Expect = 4.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacct 107
|||||||||||||||||||||
Sbjct: 99045 cctagacctagacctagacct 99065
Score = 42.1 bits (21), Expect = 4.4
Identities = 28/29 (96%), Gaps = 1/29 (3%)
Strand = Plus / Plus
Query: 87 cctagacctaga-cctagacctagaccct 114
|||||||||||| ||||||||||||||||
Sbjct: 99283 cctagacctagaacctagacctagaccct 99311
>gb|AF106584.1 | Caenorhabditis elegans cosmid F54A5, complete sequence
Length = 40018
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39356 cctagacctagacctagacctagacc 39331
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39362 cctagacctagacctagacctagacc 39337
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39368 cctagacctagacctagacctagacc 39343
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39374 cctagacctagacctagacctagacc 39349
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39380 cctagacctagacctagacctagacc 39355
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 39410 cctagacctagacctagacctagacc 39385
Score = 46.1 bits (23), Expect = 0.28
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 agacctagacctagacctagacc 112
|||||||||||||||||||||||
Sbjct: 39383 agacctagacctagacctagacc 39361
Score = 46.1 bits (23), Expect = 0.28
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 90 agacctagacctagacctagacc 112
|||||||||||||||||||||||
Sbjct: 39413 agacctagacctagacctagacc 39391
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||| |||||||||||||||||
Sbjct: 39392 cctagaccaagacctagacctagacc 39367
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||| |||||||||||
Sbjct: 39398 cctagacctagaccaagacctagacc 39373
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||||||| |||||
Sbjct: 39404 cctagacctagacctagaccaagacc 39379
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||| |||||||||||||||||
Sbjct: 39422 cctagaccaagacctagacctagacc 39397
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||| |||||||||||||
Sbjct: 39440 cctagacctagaactagacctagacc 39415
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||||| |||||||
Sbjct: 39446 cctagacctagacctagaactagacc 39421
Score = 42.1 bits (21), Expect = 4.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacct 107
|||||||||||||||||||||
Sbjct: 39350 cctagacctagacctagacct 39330
Score = 42.1 bits (21), Expect = 4.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 88 ctagacctagacctagacctagacc 112
||||||||||||| |||||||||||
Sbjct: 39427 ctagacctagaccaagacctagacc 39403
>gb|AC107765.9 | Mus musculus chromosome 17, clone RP23-166P7, complete sequence
Length = 229687
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99484 cctagacctagacctagacctagacc 99459
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99490 cctagacctagacctagacctagacc 99465
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99496 cctagacctagacctagacctagacc 99471
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 99502 cctagacctagacctagacctagacc 99477
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagac 111
|||||||||||||||||||||||||
Sbjct: 99478 cctagacctagacctagacctagac 99454
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||| |||||||||||||||||||||
Sbjct: 99508 cctacacctagacctagacctagacc 99483
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||| |||||||||||||||
Sbjct: 99514 cctagacctacacctagacctagacc 99489
Score = 44.1 bits (22), Expect = 1.1
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
|||||||||||||||| |||||||||
Sbjct: 99520 cctagacctagacctacacctagacc 99495
Score = 42.1 bits (21), Expect = 4.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagac 111
||||||||||||||||||| |||||
Sbjct: 99472 cctagacctagacctagacatagac 99448
>emb|Z81567.1 |CEK08C9 Caenorhabditis elegans Cosmid K08C9, complete sequence
Length = 16358
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2159 cctagacctagacctagacctagacc 2134
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2165 cctagacctagacctagacctagacc 2140
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2171 cctagacctagacctagacctagacc 2146
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2177 cctagacctagacctagacctagacc 2152
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2183 cctagacctagacctagacctagacc 2158
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2189 cctagacctagacctagacctagacc 2164
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2195 cctagacctagacctagacctagacc 2170
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2201 cctagacctagacctagacctagacc 2176
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2207 cctagacctagacctagacctagacc 2182
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2213 cctagacctagacctagacctagacc 2188
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 2219 cctagacctagacctagacctagacc 2194
Score = 46.1 bits (23), Expect = 0.28
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 86 gcctagacctagacctagacctagacc 112
||||| |||||||||||||||||||||
Sbjct: 2226 gcctaaacctagacctagacctagacc 2200
Score = 44.1 bits (22), Expect = 1.1
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 87 cctagacctagacctagaccta 108
||||||||||||||||||||||
Sbjct: 2153 cctagacctagacctagaccta 2132
>gb|AC134845.5 | Mus musculus BAC clone RP24-424K5 from chromosome 1, complete sequence
Length = 194449
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94678 cctagacctagacctagacctagacc 94703
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94684 cctagacctagacctagacctagacc 94709
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94690 cctagacctagacctagacctagacc 94715
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94696 cctagacctagacctagacctagacc 94721
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94702 cctagacctagacctagacctagacc 94727
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94708 cctagacctagacctagacctagacc 94733
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94714 cctagacctagacctagacctagacc 94739
Score = 52.0 bits (26), Expect = 0.005
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagacc 112
||||||||||||||||||||||||||
Sbjct: 94720 cctagacctagacctagacctagacc 94745
Score = 50.1 bits (25), Expect = 0.018
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagac 111
|||||||||||||||||||||||||
Sbjct: 94726 cctagacctagacctagacctagac 94750
Score = 46.1 bits (23), Expect = 0.28
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 90 agacctagacctagacctagacc 112
|||||||||||||||||||||||
Sbjct: 94675 agacctagacctagacctagacc 94697
Score = 42.1 bits (21), Expect = 4.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 87 cctagacctagacctagacctagac 111
||||||||||||||||||| |||||
Sbjct: 94732 cctagacctagacctagacatagac 94756
>gb|AE016825.1 | Chromobacterium violaceum ATCC 12472, complete genome
Length = 4751080
Score = 42.1 bits (21), Expect = 4.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 51 cagcgagcgccaggccaggcc 71
|||||||||||||||||||||
Sbjct: 3597180 cagcgagcgccaggccaggcc 3597200
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 183,925,426
Number of extensions: 9638252
Number of successful extensions: 219131
Number of sequences better than 10.0: 98
Number of HSP's gapped: 219075
Number of HSP's successfully gapped: 328
Length of query: 1155
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1132
Effective length of database: 18,503,978,556
Effective search space: 20946503725392
Effective search space used: 20946503725392
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)