ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92i24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os12g0241100:Os12g0241100 209 2e-54
2AK068925:Os12g0241000 117 8e-27
3AK109919: 35 0.055
4AK065737:Os09g0493600 34 0.12
5AK111401:Os02g0668100 32 0.61
6AK106165:Os02g0668100 32 0.61
7AK105878:Os02g0668100 32 0.61
8AK100459:Os02g0668100 32 0.61
9AK070976:Os07g0490200 30 3.0
10AK067620:Os07g0686700 28 8.8
11AK071766:Os02g0678400 28 8.9

>Os12g0241100:Os12g0241100 |
          Length = 182
 Score =  209 bits (532), Expect = 2e-54
 Identities = 115/168 (68%), Positives = 121/168 (72%), Gaps = 10/168 (5%)
 Frame = +3

Query: 51  MFSAVRSRALGQWXXXXXXXXXXXXXXXXXXXXXXE----LIELSEVEKVLHDVRAGDVR 218
           M SA RS AL +W                           L+EL EVEKVL DVRAGDVR
Sbjct: 1   MLSAARSGALARWRPRETLLPRLLSSSATGAASPPARQAALLELPEVEKVLRDVRAGDVR 60

Query: 219 VFPVGEGGLHGGACADYMVVATGRSDWHVRNI------AQAILYKIKQKQKGSNRILMPS 380
           VFPVGEGGLHGG+CADYMVVATGRSDWH   I      A A L  IKQKQKGS+RILMPS
Sbjct: 61  VFPVGEGGLHGGSCADYMVVATGRSDWHEEIILNEAEHAHAGLSNIKQKQKGSDRILMPS 120

Query: 381 VEGQQAGKWVVIDSGSIIIHALEERAREYYDLESIWTKAVSPNISVQE 524
           VEGQQAGKW+VIDSGSIIIHALEERAREYYDLESIWTK VSPNISVQ+
Sbjct: 121 VEGQQAGKWIVIDSGSIIIHALEERAREYYDLESIWTKEVSPNISVQK 168



to top

>AK068925:Os12g0241000 |
          Length = 90

 Score =  117 bits (294), Expect = 8e-27
 Identities = 60/79 (75%), Positives = 62/79 (78%)
 Frame = -3

Query: 590 SNALHGFL*QVPAARLHK*GLQLLNRNVRGHRLCPNTFQIIVLSCSFFKRMDDDTSRIND 411
           SNALHGFL  VPAA LHK   Q LNRNV  H  CPN FQII+ SCSFFK M+DDTSRIND
Sbjct: 3   SNALHGFLRVVPAACLHKGSFQFLNRNVWRHFFCPNAFQIIIFSCSFFKCMNDDTSRIND 62

Query: 410 NPLPSLLAFYTRHQYSIRT 354
           NPL SLLAF T HQYSIRT
Sbjct: 63  NPLSSLLAFNTWHQYSIRT 81



to top

>AK109919: |
          Length = 780

 Score = 35.4 bits (80), Expect = 0.055
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +3

Query: 399 GKWVVIDSGSIIIHALEERAREYYDLESIW 488
           G W ++D+   ++H + E+AR  YD+E IW
Sbjct: 219 GNWCLVDADWCMVHVMTEQARFNYDIEGIW 248



to top

>AK065737:Os09g0493600 |
          Length = 225

 Score = 34.3 bits (77), Expect = 0.12
 Identities = 23/107 (21%), Positives = 46/107 (42%)
 Frame = +3

Query: 183 KVLHDVRAGDVRVFPVGEGGLHGGACADYMVVATGRSDWHVRNIAQAILYKIKQKQKGSN 362
           KV  +V+A D+RV  V            + ++ T  S+  +  I+       K +  G  
Sbjct: 119 KVASEVKAADIRVLFVKPLVYW----TRFFIILTAFSNAQIDAISS------KMRDIGEK 168

Query: 363 RILMPSVEGQQAGKWVVIDSGSIIIHALEERAREYYDLESIWTKAVS 503
           +  + +    +   W ++D G +++H    + R +Y+LE  +  A S
Sbjct: 169 QFSIVASGDTKPNSWTLLDFGDVVVHIFLPQQRAFYNLEEFYGNATS 215



to top

>AK111401:Os02g0668100 |
          Length = 342

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 290 AASGDDHVVRTGAAVEPALTDGEHTHVPRPDVVQHLLHLRELDKLGR 150
           AA G D  V  G A+ P        H P PD V H + LR L +L R
Sbjct: 146 AAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 192



to top

>AK106165:Os02g0668100 |
          Length = 256

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 290 AASGDDHVVRTGAAVEPALTDGEHTHVPRPDVVQHLLHLRELDKLGR 150
           AA G D  V  G A+ P        H P PD V H + LR L +L R
Sbjct: 60  AAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 106



to top

>AK105878:Os02g0668100 |
          Length = 342

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 290 AASGDDHVVRTGAAVEPALTDGEHTHVPRPDVVQHLLHLRELDKLGR 150
           AA G D  V  G A+ P        H P PD V H + LR L +L R
Sbjct: 146 AAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 192



to top

>AK100459:Os02g0668100 |
          Length = 342

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 19/47 (40%), Positives = 22/47 (46%)
 Frame = -3

Query: 290 AASGDDHVVRTGAAVEPALTDGEHTHVPRPDVVQHLLHLRELDKLGR 150
           AA G D  V  G A+ P        H P PD V H + LR L +L R
Sbjct: 146 AAYGTDMAVLAGDALFPLAYTHVIAHTPSPDPVPHAVLLRVLGELAR 192



to top

>AK070976:Os07g0490200 |
          Length = 927

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 27/118 (22%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
 Frame = -3

Query: 728 VS*IQVVSFTSNLANLSFKVLDTNKLDAANLTNPLQMMDHGRSTFNSNALHGFL*Q---- 561
           VS  Q+ +   N  N+    + +N + A N+ +     +HG +  N+N       Q    
Sbjct: 241 VSSQQINNGPKNSGNIVNTSMASNAIPALNVVSETYATNHGLNQVNANHFGALKHQGDQT 300

Query: 560 --VPAARLHK*GLQLLNRNVR----GHRLCPNTFQIIVLSCSFFKRMDDDTSRINDNP 405
             + A+ +     Q ++ +V+    G+   PN       S   +K +DDD+  + DNP
Sbjct: 301 QSLLASDVDSQSDQFISSSVKSPMDGNTSIPNEVPARQNSLGLWKYLDDDSPGLGDNP 358



to top

>AK067620:Os07g0686700 |
          Length = 668

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/107 (19%), Positives = 52/107 (48%)
 Frame = +3

Query: 294 DWHVRNIAQAILYKIKQKQKGSNRILMPSVEGQQAGKWVVIDSGSIIIHALEERAREYYD 473
           D  ++ +A + + KI    +G +R L       +   W+ + +G + +++ + + +   +
Sbjct: 260 DKRMQLLADSGIQKIASISEGLSRSLSVFSIYSEHSDWLHMWAG-VELNSAQHKLKSEME 318

Query: 474 LESIWTKAVSPNISVQELETSLVKTRRRDLSQKPMKSI*VKCAAAMI 614
            E  W+ ++   + +QE+ ++ + + R D     +    VK A+AMI
Sbjct: 319 DEINWSYSIK-ELGLQEITSNFLLSTREDYKAPTISEFVVKTASAMI 364



to top

>AK071766:Os02g0678400 |
          Length = 203

 Score = 28.1 bits (61), Expect = 8.9
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +1

Query: 223 SPSVRAGSTAAPVRTTWSSPLAAPTGTSATSHRPYSTR 336
           SP   A   +AP R  W+SP  AP     +  RP S R
Sbjct: 23  SPRRAAPPFSAPRRRAWASPPTAPPPPPRSRRRPRSRR 60


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 24,875,512
Number of extensions: 568557
Number of successful extensions: 1666
Number of sequences better than 10.0: 11
Number of HSP's gapped: 1661
Number of HSP's successfully gapped: 11
Length of query: 302
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 202
Effective length of database: 11,395,755
Effective search space: 2301942510
Effective search space used: 2301942510
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top