ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92i24
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001073010.1| Oryza sativa (japonica cultivar-group) Os12g... 523 e-145
2dbj|AK068925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 523 e-145
3ref|NM_001073011.1| Oryza sativa (japonica cultivar-group) Os12g... 226 1e-55
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 220 7e-54
5emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa... 220 7e-54
6gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 46 0.22
7emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chrom... 46 0.22
8emb|CT829478.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 0.86
9emb|CT829477.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 0.86
10emb|CT828509.1| Oryza sativa (indica cultivar-group) cDNA clone:... 44 0.86
11emb|CR855152.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 44 0.86
12ref|NM_001060695.1| Oryza sativa (japonica cultivar-group) Os04g... 44 0.86
13ref|NM_001057104.1| Oryza sativa (japonica cultivar-group) Os03g... 44 0.86
14gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genom... 44 0.86
15gb|DQ131903.1| Homo sapiens interleukin 1 receptor-like 2 (IL1RL... 44 0.86
16dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.86
17dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.86
18emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4,... 44 0.86
19gb|AC007271.4| Homo sapiens BAC clone RP11-4B12 from 2, complete... 44 0.86
20dbj|AK099504.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.86
21dbj|AK068097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.86
22dbj|AK065171.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.86
23dbj|AK059901.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.86
24emb|CT010459.8| M.truncatula DNA sequence from clone MTH2-35J4 o... 44 0.86
25ref|XM_510163.2| PREDICTED: Pan troglodytes hypothetical LOC4531... 42 3.4
26gb|AC125323.4| Mus musculus BAC clone RP23-447G3 from chromosome... 42 3.4
27gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome... 42 3.4
28gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, com... 42 3.4
29dbj|AK123821.1| Homo sapiens cDNA FLJ41827 fis, clone NT2RI20259... 42 3.4
30dbj|AK095532.1| Homo sapiens cDNA FLJ38213 fis, clone FCBBF10005... 42 3.4
31dbj|AK096294.1| Homo sapiens cDNA FLJ38975 fis, clone NT2RI20040... 42 3.4
32emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 3.4
33gb|AE011824.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 3.4
34emb|BX276094.4| Human DNA sequence from clone RP11-156J5 on chro... 42 3.4
35ref|NM_152333.2| Homo sapiens solute carrier family 25, member 2... 42 3.4
36ref|NM_001039355.1| Homo sapiens solute carrier family 25, membe... 42 3.4
37emb|CR618322.1| full-length cDNA clone CS0DF016YF16 of Fetal bra... 42 3.4
38emb|CR614751.1| full-length cDNA clone CS0DF024YK07 of Fetal bra... 42 3.4
39emb|CR600978.1| full-length cDNA clone CS0DI080YD19 of Placenta ... 42 3.4
40emb|CR600250.1| full-length cDNA clone CS0DC016YM21 of Neuroblas... 42 3.4
41emb|CR592557.1| full-length cDNA clone CS0DC024YK05 of Neuroblas... 42 3.4
42dbj|AK172788.1| Homo sapiens cDNA FLJ23949 fis, clone HEP08438 42 3.4
43emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-6... 42 3.4
44emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-3... 42 3.4
45gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, comple... 42 3.4
46emb|BX247983.1|CNSLT1I6H human full-length cDNA clone CS0DF030YI... 42 3.4
47emb|AL832299.1|HSM803606 Homo sapiens mRNA; cDNA DKFZp667D0319 (... 42 3.4 
>ref|NM_001073010.1| Oryza sativa (japonica cultivar-group) Os12g0241000 (Os12g0241000)
           mRNA, complete cds
          Length = 811
 Score =  523 bits (264), Expect = e-145
 Identities = 387/428 (90%)
 Strand = Plus / Minus

                                                                       
Query: 165 gagctctcggaggtggagaaggtgctgcacgacgtccgggcgggggacgtgcgtgtgttc 224
           |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || |||
Sbjct: 663 gagctcccggaggtggagaaggtgctgcgcgacgtgcgggcgggggacgtgcgcgtcttc 604

                                                                       
Query: 225 cccgtcggtgagggcgggctccacggcggcgcctgtgcggactacatggtcgtcgccact 284
           |||||||| ||||||||||| || |||||| |||| || |||||||||||||||||||| 
Sbjct: 603 cccgtcggcgagggcgggctgcatggcggctcctgcgccgactacatggtcgtcgccacc 544

                                                                       
Query: 285 ggccgctccgactggcacgtccgcaacatcgcacaggccatactctacaagataaagcag 344
           |||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||
Sbjct: 543 ggccgctccgactggcacgtccgcaacatcgcccaggctctactctacaagataaaacag 484

                                                                       
Query: 345 aaacagaagggttctaatcgaatattgatgccgagtgtagaaggccagcaagctgggaag 404
           || |||||||||||| || ||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 483 aagcagaagggttctgatagaatattgatgccaagtgttgaaggccagcaagctggaaag 424

                                                                       
Query: 405 tgggttgtcattgattctggaagtatcatcatccatgcgcttgaagaaagagcaagagag 464
           ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| 
Sbjct: 423 tggattgtcattgattctggaagtatcatcattcatgcacttgaagaaagagcaagagaa 364

                                                                       
Query: 465 tactatgatttggaaagtatttggacaaaggcggtgtcccctaacatttctgttcaggag 524
           || |||||||||||||| ||||||||||| |  ||||| || ||||||||||||||||| 
Sbjct: 363 tattatgatttggaaagcatttggacaaaagaagtgtctccaaacatttctgttcaggaa 304

                                                                       
Query: 525 ttggagacctcacttgtgaagacgcgccgcagggacctgtcacagaaacccatgaagagc 584
           ||||| || || ||||||||||| |||||||||||||  || ||||||||||||||||||
Sbjct: 303 ttggaaacttcccttgtgaagacacgccgcagggaccactctcagaaacccatgaagagc 244

                   
Query: 585 atttgagt 592
           ||||||||
Sbjct: 243 atttgagt 236
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>dbj|AK068925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001D05, full
           insert sequence
          Length = 812

 Score =  523 bits (264), Expect = e-145
 Identities = 387/428 (90%)
 Strand = Plus / Plus

                                                                       
Query: 165 gagctctcggaggtggagaaggtgctgcacgacgtccgggcgggggacgtgcgtgtgttc 224
           |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || |||
Sbjct: 150 gagctcccggaggtggagaaggtgctgcgcgacgtgcgggcgggggacgtgcgcgtcttc 209

                                                                       
Query: 225 cccgtcggtgagggcgggctccacggcggcgcctgtgcggactacatggtcgtcgccact 284
           |||||||| ||||||||||| || |||||| |||| || |||||||||||||||||||| 
Sbjct: 210 cccgtcggcgagggcgggctgcatggcggctcctgcgccgactacatggtcgtcgccacc 269

                                                                       
Query: 285 ggccgctccgactggcacgtccgcaacatcgcacaggccatactctacaagataaagcag 344
           |||||||||||||||||||||||||||||||| |||||  |||||||||||||||| |||
Sbjct: 270 ggccgctccgactggcacgtccgcaacatcgcccaggctctactctacaagataaaacag 329

                                                                       
Query: 345 aaacagaagggttctaatcgaatattgatgccgagtgtagaaggccagcaagctgggaag 404
           || |||||||||||| || ||||||||||||| ||||| ||||||||||||||||| |||
Sbjct: 330 aagcagaagggttctgatagaatattgatgccaagtgttgaaggccagcaagctggaaag 389

                                                                       
Query: 405 tgggttgtcattgattctggaagtatcatcatccatgcgcttgaagaaagagcaagagag 464
           ||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| 
Sbjct: 390 tggattgtcattgattctggaagtatcatcattcatgcacttgaagaaagagcaagagaa 449

                                                                       
Query: 465 tactatgatttggaaagtatttggacaaaggcggtgtcccctaacatttctgttcaggag 524
           || |||||||||||||| ||||||||||| |  ||||| || ||||||||||||||||| 
Sbjct: 450 tattatgatttggaaagcatttggacaaaagaagtgtctccaaacatttctgttcaggaa 509

                                                                       
Query: 525 ttggagacctcacttgtgaagacgcgccgcagggacctgtcacagaaacccatgaagagc 584
           ||||| || || ||||||||||| |||||||||||||  || ||||||||||||||||||
Sbjct: 510 ttggaaacttcccttgtgaagacacgccgcagggaccactctcagaaacccatgaagagc 569

                   
Query: 585 atttgagt 592
           ||||||||
Sbjct: 570 atttgagt 577
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>ref|NM_001073011.1| Oryza sativa (japonica cultivar-group) Os12g0241100 (Os12g0241100)
           mRNA, complete cds
          Length = 549

 Score =  226 bits (114), Expect = 1e-55
 Identities = 168/186 (90%)
 Strand = Plus / Plus

                                                                       
Query: 336 ataaagcagaaacagaagggttctaatcgaatattgatgccgagtgtagaaggccagcaa 395
           ||||| ||||| |||||||||||| || ||||||||||||| ||||| ||||||||||||
Sbjct: 316 ataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagcaa 375

                                                                       
Query: 396 gctgggaagtgggttgtcattgattctggaagtatcatcatccatgcgcttgaagaaaga 455
           ||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 376 gctggaaagtggattgtcattgattctggaagtatcatcattcatgcacttgaagaaaga 435

                                                                       
Query: 456 gcaagagagtactatgatttggaaagtatttggacaaaggcggtgtcccctaacatttct 515
           |||||||| || |||||||||||||| ||||||||||| |  ||||| || |||||||||
Sbjct: 436 gcaagagaatattatgatttggaaagcatttggacaaaagaagtgtctccaaacatttct 495

                 
Query: 516 gttcag 521
           ||||||
Sbjct: 496 gttcag 501



 Score =  180 bits (91), Expect = 6e-42
 Identities = 127/139 (91%)
 Strand = Plus / Plus

                                                                       
Query: 165 gagctctcggaggtggagaaggtgctgcacgacgtccgggcgggggacgtgcgtgtgttc 224
           |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || |||
Sbjct: 127 gagctcccggaggtggagaaggtgctgcgcgacgtgcgggcgggggacgtgcgcgtcttc 186

                                                                       
Query: 225 cccgtcggtgagggcgggctccacggcggcgcctgtgcggactacatggtcgtcgccact 284
           |||||||| ||||||||||| || |||||| |||| || |||||||||||||||||||| 
Sbjct: 187 cccgtcggcgagggcgggctgcatggcggctcctgcgccgactacatggtcgtcgccacc 246

                              
Query: 285 ggccgctccgactggcacg 303
           |||||||||||||||||||
Sbjct: 247 ggccgctccgactggcacg 265
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score =  220 bits (111), Expect = 7e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                           
Query: 165     gagctctcggaggtggagaaggtgctgcacgacgtccgggcgggggacgtgcgtgtgttc 224
               |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || |||
Sbjct: 7823909 gagctcccggaggtggagaaggtgctgcgcgacgtgcgggcgggggacgtgcgcgtcttc 7823850

                                                                           
Query: 225     cccgtcggtgagggcgggctccacggcggcgcctgtgcggactacatggtcgtcgccact 284
               |||||||| ||||||||||| || |||||| |||| || |||||||||||||||||||| 
Sbjct: 7823849 cccgtcggcgagggcgggctgcatggcggctcctgcgccgactacatggtcgtcgccacc 7823790

                                                                  
Query: 285     ggccgctccgactggcacgtccgcaacatcgcacaggccatactctacaag 335
               |||||||||||||||||||||||||||||||| |||||  |||||||||||
Sbjct: 7823789 ggccgctccgactggcacgtccgcaacatcgcccaggctctactctacaag 7823739



 Score =  119 bits (60), Expect = 2e-23
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                           
Query: 423     ggaagtatcatcatccatgcgcttgaagaaagagcaagagagtactatgatttggaaagt 482
               |||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| 
Sbjct: 7821182 ggaagtatcatcattcatgcacttgaagaaagagcaagagaatattatgatttggaaagc 7821123

                                                       
Query: 483     atttggacaaaggcggtgtcccctaacatttctgttcagg 522
               ||||||||||| |  ||||| || ||||||||||||||||
Sbjct: 7821122 atttggacaaaagaagtgtctccaaacatttctgttcagg 7821083



 Score =  117 bits (59), Expect = 7e-23
 Identities = 83/91 (91%)
 Strand = Plus / Minus

                                                                           
Query: 334     agataaagcagaaacagaagggttctaatcgaatattgatgccgagtgtagaaggccagc 393
               ||||||| ||||| |||||||||||| || ||||||||||||| ||||| ||||||||||
Sbjct: 7822029 agataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagc 7821970

                                              
Query: 394     aagctgggaagtgggttgtcattgattctgg 424
               ||||||| |||||| ||||||||||||||||
Sbjct: 7821969 aagctggaaagtggattgtcattgattctgg 7821939



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                           
Query: 519     caggagttggagacctcacttgtgaagacgcgccgcagggacctgtcacagaaacccatg 578
               ||||| ||||| || || ||||||||||| |||||||||||||  || ||||||||||||
Sbjct: 7819632 caggaattggaaacttcccttgtgaagacacgccgcagggaccactctcagaaacccatg 7819573

                             
Query: 579     aagagcatttgagt 592
               ||||||||||||||
Sbjct: 7819572 aagagcatttgagt 7819559
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>emb|AL731786.3|CNS08C8A Oryza sativa chromosome 12, . BAC OSJNBa0010J13 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 146055

 Score =  220 bits (111), Expect = 7e-54
 Identities = 156/171 (91%)
 Strand = Plus / Minus

                                                                          
Query: 165    gagctctcggaggtggagaaggtgctgcacgacgtccgggcgggggacgtgcgtgtgttc 224
              |||||| ||||||||||||||||||||| |||||| ||||||||||||||||| || |||
Sbjct: 122900 gagctcccggaggtggagaaggtgctgcgcgacgtgcgggcgggggacgtgcgcgtcttc 122841

                                                                          
Query: 225    cccgtcggtgagggcgggctccacggcggcgcctgtgcggactacatggtcgtcgccact 284
              |||||||| ||||||||||| || |||||| |||| || |||||||||||||||||||| 
Sbjct: 122840 cccgtcggcgagggcgggctgcatggcggctcctgcgccgactacatggtcgtcgccacc 122781

                                                                 
Query: 285    ggccgctccgactggcacgtccgcaacatcgcacaggccatactctacaag 335
              |||||||||||||||||||||||||||||||| |||||  |||||||||||
Sbjct: 122780 ggccgctccgactggcacgtccgcaacatcgcccaggctctactctacaag 122730



 Score =  119 bits (60), Expect = 2e-23
 Identities = 90/100 (90%)
 Strand = Plus / Minus

                                                                          
Query: 423    ggaagtatcatcatccatgcgcttgaagaaagagcaagagagtactatgatttggaaagt 482
              |||||||||||||| ||||| |||||||||||||||||||| || |||||||||||||| 
Sbjct: 120173 ggaagtatcatcattcatgcacttgaagaaagagcaagagaatattatgatttggaaagc 120114

                                                      
Query: 483    atttggacaaaggcggtgtcccctaacatttctgttcagg 522
              ||||||||||| |  ||||| || ||||||||||||||||
Sbjct: 120113 atttggacaaaagaagtgtctccaaacatttctgttcagg 120074



 Score =  117 bits (59), Expect = 7e-23
 Identities = 83/91 (91%)
 Strand = Plus / Minus

                                                                          
Query: 334    agataaagcagaaacagaagggttctaatcgaatattgatgccgagtgtagaaggccagc 393
              ||||||| ||||| |||||||||||| || ||||||||||||| ||||| ||||||||||
Sbjct: 121020 agataaaacagaagcagaagggttctgatagaatattgatgccaagtgttgaaggccagc 120961

                                             
Query: 394    aagctgggaagtgggttgtcattgattctgg 424
              ||||||| |||||| ||||||||||||||||
Sbjct: 120960 aagctggaaagtggattgtcattgattctgg 120930



 Score = 83.8 bits (42), Expect = 1e-12
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                          
Query: 519    caggagttggagacctcacttgtgaagacgcgccgcagggacctgtcacagaaacccatg 578
              ||||| ||||| || || ||||||||||| |||||||||||||  || ||||||||||||
Sbjct: 118623 caggaattggaaacttcccttgtgaagacacgccgcagggaccactctcagaaacccatg 118564

                            
Query: 579    aagagcatttgagt 592
              ||||||||||||||
Sbjct: 118563 aagagcatttgagt 118550
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 262    cggactacatggtcgtcgccactggccgctccgactggcacgt 304
              |||||||||||||| ||||||| ||||| ||| || |||||||
Sbjct: 577759 cggactacatggtcatcgccaccggccggtccaaccggcacgt 577801
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>emb|AL808116.6| Mouse DNA sequence from clone RP23-97H1 on chromosome X, complete
            sequence
          Length = 200519

 Score = 46.1 bits (23), Expect = 0.22
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 576  atgaagagcatttgagttaaatg 598
            |||||||||||||||||||||||
Sbjct: 2103 atgaagagcatttgagttaaatg 2081
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>emb|CT829478.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA002B06, full
           insert sequence
          Length = 1133

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 248 cggcggcgcctgtgcggactac 269
           ||||||||||||||||||||||
Sbjct: 207 cggcggcgcctgtgcggactac 186
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>emb|CT829477.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120F09, full
           insert sequence
          Length = 1930

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 248 cggcggcgcctgtgcggactac 269
           ||||||||||||||||||||||
Sbjct: 203 cggcggcgcctgtgcggactac 182
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>emb|CT828509.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN034O18, full
           insert sequence
          Length = 1143

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 112 cgcgcctcctctcctccgccagcgcctcgt 141
           |||||||| |||||||||||| ||||||||
Sbjct: 46  cgcgcctcgtctcctccgccaccgcctcgt 17
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>emb|CR855152.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0099L20,
            complete sequence
          Length = 82575

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 112  cgcgcctcctctcctccgccagcgcctcgt 141
            |||||||| |||||||||||| ||||||||
Sbjct: 3785 cgcgcctcgtctcctccgccaccgcctcgt 3814
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>ref|NM_001060695.1| Oryza sativa (japonica cultivar-group) Os04g0662900 (Os04g0662900)
           mRNA, complete cds
          Length = 1243

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 112 cgcgcctcctctcctccgccagcgcctcgt 141
           |||||||| |||||||||||| ||||||||
Sbjct: 53  cgcgcctcgtctcctccgccaccgcctcgt 24
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>ref|NM_001057104.1| Oryza sativa (japonica cultivar-group) Os03g0586500 (Os03g0586500)
           mRNA, complete cds
          Length = 1127

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 248 cggcggcgcctgtgcggactac 269
           ||||||||||||||||||||||
Sbjct: 206 cggcggcgcctgtgcggactac 185
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>gb|AC133003.3| Oryza sativa chromosome 3 BAC OSJNBa0010D22 genomic sequence, complete
              sequence
          Length = 190055

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 248    cggcggcgcctgtgcggactac 269
              ||||||||||||||||||||||
Sbjct: 135980 cggcggcgcctgtgcggactac 135959
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>gb|DQ131903.1| Homo sapiens interleukin 1 receptor-like 2 (IL1RL2) gene, complete cds
          Length = 56373

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 558   gacctgtcacagaaacccatgaagag 583
             ||||||||||||||| ||||||||||
Sbjct: 14372 gacctgtcacagaaaaccatgaagag 14347
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 112      cgcgcctcctctcctccgccagcgcctcgt 141
                |||||||| |||||||||||| ||||||||
Sbjct: 33866251 cgcgcctcgtctcctccgccaccgcctcgt 33866280
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 248      cggcggcgcctgtgcggactac 269
                ||||||||||||||||||||||
Sbjct: 21436098 cggcggcgcctgtgcggactac 21436077
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>emb|AL606999.3|OSJN00127 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K01,
             complete sequence
          Length = 163448

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 112   cgcgcctcctctcctccgccagcgcctcgt 141
             |||||||| |||||||||||| ||||||||
Sbjct: 78150 cgcgcctcgtctcctccgccaccgcctcgt 78179
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>gb|AC007271.4| Homo sapiens BAC clone RP11-4B12 from 2, complete sequence
          Length = 179954

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 558    gacctgtcacagaaacccatgaagag 583
              ||||||||||||||| ||||||||||
Sbjct: 151868 gacctgtcacagaaaaccatgaagag 151843
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>dbj|AK099504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028O12, full
           insert sequence
          Length = 1243

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 112 cgcgcctcctctcctccgccagcgcctcgt 141
           |||||||| |||||||||||| ||||||||
Sbjct: 55  cgcgcctcgtctcctccgccaccgcctcgt 26
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>dbj|AK068097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132D23, full
           insert sequence
          Length = 1129

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 248 cggcggcgcctgtgcggactac 269
           ||||||||||||||||||||||
Sbjct: 208 cggcggcgcctgtgcggactac 187
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>dbj|AK065171.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002C20, full
           insert sequence
          Length = 1244

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 112 cgcgcctcctctcctccgccagcgcctcgt 141
           |||||||| |||||||||||| ||||||||
Sbjct: 54  cgcgcctcgtctcctccgccaccgcctcgt 25
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>dbj|AK059901.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-G07, full
           insert sequence
          Length = 1116

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 248 cggcggcgcctgtgcggactac 269
           ||||||||||||||||||||||
Sbjct: 202 cggcggcgcctgtgcggactac 181
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>emb|CT010459.8| M.truncatula DNA sequence from clone MTH2-35J4 on chromosome 3,
             complete sequence
          Length = 128491

 Score = 44.1 bits (22), Expect = 0.86
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 664   tcaagaaccttgaaggataagt 685
             ||||||||||||||||||||||
Sbjct: 58338 tcaagaaccttgaaggataagt 58359
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>ref|XM_510163.2| PREDICTED: Pan troglodytes hypothetical LOC453160 (LOC453160), mRNA
          Length = 3219

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   atggcgcccgccgccgcacct 106
            |||||||||||||||||||||
Sbjct: 1439 atggcgcccgccgccgcacct 1419
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>gb|AC125323.4| Mus musculus BAC clone RP23-447G3 from chromosome 7, complete sequence
          Length = 174405

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 699   tgtgaatgagaccacctggat 719
             |||||||||||||||||||||
Sbjct: 58605 tgtgaatgagaccacctggat 58625
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>gb|AC123820.4| Mus musculus BAC clone RP23-461O5 from chromosome 7, complete sequence
          Length = 204757

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 699    tgtgaatgagaccacctggat 719
              |||||||||||||||||||||
Sbjct: 131655 tgtgaatgagaccacctggat 131675
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>gb|AC013285.10| Homo sapiens chromosome 10 clone RP11-143D9, complete sequence
          Length = 202500

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 509   catttctgttcaggagttggagacc 533
             |||||||| ||||||||||||||||
Sbjct: 97045 catttctggtcaggagttggagacc 97069
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>dbj|AK123821.1| Homo sapiens cDNA FLJ41827 fis, clone NT2RI2025909, weakly  similar
           to Homo sapiens solute carrier family 25
           (carnitine/acylcarnitine translocase), member 20
           (SLC25A20)
          Length = 2284

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 521 atggcgcccgccgccgcacct 501
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>dbj|AK095532.1| Homo sapiens cDNA FLJ38213 fis, clone FCBBF1000574, weakly similar to
            MITOCHONDRIAL CARRIER PROTEIN YMC2 PRECURSOR
          Length = 2832

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   atggcgcccgccgccgcacct 106
            |||||||||||||||||||||
Sbjct: 1069 atggcgcccgccgccgcacct 1049
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>dbj|AK096294.1| Homo sapiens cDNA FLJ38975 fis, clone NT2RI2004093, weakly similar
           to MITOCHONDRIAL CARRIER PROTEIN YMC2 PRECURSOR
          Length = 2240

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 477 atggcgcccgccgccgcacct 457
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 433     tcatccatgcgcttgaagaaa 453
               |||||||||||||||||||||
Sbjct: 2214511 tcatccatgcgcttgaagaaa 2214531
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>gb|AE011824.1| Xanthomonas axonopodis pv. citri str. 306,  section 202 of 469 of the
            complete genome
          Length = 11466

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 433  tcatccatgcgcttgaagaaa 453
            |||||||||||||||||||||
Sbjct: 5037 tcatccatgcgcttgaagaaa 5057
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>emb|BX276094.4| Human DNA sequence from clone RP11-156J5 on chromosome 10, complete
            sequence
          Length = 58437

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 509  catttctgttcaggagttggagacc 533
            |||||||| ||||||||||||||||
Sbjct: 4582 catttctggtcaggagttggagacc 4558
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>ref|NM_152333.2| Homo sapiens solute carrier family 25, member 29 (SLC25A29),
           transcript variant 2, mRNA
          Length = 2326

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 561 atggcgcccgccgccgcacct 541
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>ref|NM_001039355.1| Homo sapiens solute carrier family 25, member 29 (SLC25A29),
           transcript variant 1, mRNA
          Length = 2370

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 605 atggcgcccgccgccgcacct 585
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>emb|CR618322.1| full-length cDNA clone CS0DF016YF16 of Fetal brain of Homo sapiens
           (human)
          Length = 1883

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 152 atggcgcccgccgccgcacct 132
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>emb|CR614751.1| full-length cDNA clone CS0DF024YK07 of Fetal brain of Homo sapiens
           (human)
          Length = 2300

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 541 atggcgcccgccgccgcacct 521
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>emb|CR600978.1| full-length cDNA clone CS0DI080YD19 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 2795

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   atggcgcccgccgccgcacct 106
            |||||||||||||||||||||
Sbjct: 1043 atggcgcccgccgccgcacct 1023
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>emb|CR600250.1| full-length cDNA clone CS0DC016YM21 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2231

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 557 atggcgcccgccgccgcacct 537
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>emb|CR592557.1| full-length cDNA clone CS0DC024YK05 of Neuroblastoma Cot
           25-normalized of Homo sapiens (human)
          Length = 2258

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 512 atggcgcccgccgccgcacct 492
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>dbj|AK172788.1| Homo sapiens cDNA FLJ23949 fis, clone HEP08438
          Length = 2339

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 551 atggcgcccgccgccgcacct 531
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>emb|AL157871.5|CNS01RG9 Human chromosome 14 DNA sequence BAC R-638I2 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 180688

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 86     atggcgcccgccgccgcacct 106
              |||||||||||||||||||||
Sbjct: 100853 atggcgcccgccgccgcacct 100873
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>emb|AL135838.6|CNS01DVI Human chromosome 14 DNA sequence BAC R-362L22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 187710

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     atggcgcccgccgccgcacct 106
              |||||||||||||||||||||
Sbjct: 161046 atggcgcccgccgccgcacct 161026
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>gb|AC151477.1| Mus musculus BAC clone RP23-154G20 from 7, complete sequence
          Length = 212010

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 699    tgtgaatgagaccacctggat 719
              |||||||||||||||||||||
Sbjct: 165293 tgtgaatgagaccacctggat 165273
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>emb|BX247983.1|CNSLT1I6H human full-length cDNA clone CS0DF030YI18 of Fetal brain of Homo
           sapiens (human)
          Length = 2363

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 86  atggcgcccgccgccgcacct 106
           |||||||||||||||||||||
Sbjct: 605 atggcgcccgccgccgcacct 585
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>emb|AL832299.1|HSM803606 Homo sapiens mRNA; cDNA DKFZp667D0319 (from clone DKFZp667D0319)
          Length = 4904

 Score = 42.1 bits (21), Expect = 3.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 86   atggcgcccgccgccgcacct 106
            |||||||||||||||||||||
Sbjct: 3124 atggcgcccgccgccgcacct 3104


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 134,270,590
Number of extensions: 7211518
Number of successful extensions: 176136
Number of sequences better than 10.0: 47
Number of HSP's gapped: 176136
Number of HSP's successfully gapped: 54
Length of query: 907
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 884
Effective length of database: 18,503,978,556
Effective search space: 16357517043504
Effective search space used: 16357517043504
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 14 (28.2 bits)
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