ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf89h08 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK098950:Os02g0739600 | 259 | 2e-69 | 2 | AK062242:Os02g0739600 | 259 | 2e-69 | 3 | AK105105:Os06g0246500 | 230 | 6e-61 | 4 | AK069299:Os04g0119400 | 87 | 9e-18 | 5 | AK068933:Os12g0183100 | 76 | 3e-14 | 6 | AK064862:Os12g0183100 | 76 | 3e-14 | 7 | AK060732:Os12g0183100 | 76 | 3e-14 | 8 | AK119646:Os06g0316100 | 30 | 1.7 | 9 | AK105260:Os06g0316100 | 30 | 1.7 | 10 | AK119313:Os12g0194000 | 29 | 3.7 | 11 | Os03g0176100:Os03g0176100 | 28 | 4.8 | 12 | Os11g0229200:Os11g0229200 | 28 | 8.2 | 13 | AK059268:Os01g0624500 | 28 | 8.2 | 14 | AF192467:Os01g0624500 | 28 | 8.2 |
|---|
>AK098950:Os02g0739600 | Length = 390 Score = 259 bits (661), Expect = 2e-69 Identities = 130/133 (97%), Positives = 130/133 (97%) Frame = +3 Query: 3 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI Sbjct: 258 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 317 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVYVKGFGVES 362 ERVRKLILAHDLAT AELKDMEKEIRKEVD AIAKAKESPMPD SELFTNVYVKGFGVES Sbjct: 318 ERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDTSELFTNVYVKGFGVES 377 Query: 363 FGADRKELRATLP 401 FGADRKELRATLP Sbjct: 378 FGADRKELRATLP 390
>AK062242:Os02g0739600 | Length = 390 Score = 259 bits (661), Expect = 2e-69 Identities = 130/133 (97%), Positives = 130/133 (97%) Frame = +3 Query: 3 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI Sbjct: 258 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 317 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVYVKGFGVES 362 ERVRKLILAHDLAT AELKDMEKEIRKEVD AIAKAKESPMPD SELFTNVYVKGFGVES Sbjct: 318 ERVRKLILAHDLATAAELKDMEKEIRKEVDDAIAKAKESPMPDTSELFTNVYVKGFGVES 377 Query: 363 FGADRKELRATLP 401 FGADRKELRATLP Sbjct: 378 FGADRKELRATLP 390
>AK105105:Os06g0246500 | Length = 398 Score = 230 bits (587), Expect = 6e-61 Identities = 111/133 (83%), Positives = 120/133 (90%) Frame = +3 Query: 3 MDVLAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 MDVLAVKQACKFAK+HA+ NGPI+LEMDTYRYHGHSMSDPGSTYRTRDEI+G+RQERDPI Sbjct: 266 MDVLAVKQACKFAKQHALENGPIILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQERDPI 325 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVYVKGFGVES 362 ERVRKL+LAHD AT ELKDMEKEIRK+VD AIAKAKESPMPD SELFTNVYV G+ES Sbjct: 326 ERVRKLLLAHDFATTQELKDMEKEIRKQVDTAIAKAKESPMPDPSELFTNVYVNDCGLES 385 Query: 363 FGADRKELRATLP 401 FG DRK +R LP Sbjct: 386 FGVDRKVVRTVLP 398
>AK069299:Os04g0119400 | Length = 425 Score = 87.4 bits (215), Expect = 9e-18 Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 3/130 (2%) Frame = +3 Query: 3 MDVLAVKQACKFAKEHAI-ANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDP 179 MDVL V++ K A E A GP ++E +TYR+ GHS++DP R DE S RDP Sbjct: 287 MDVLKVREVAKEAIERARRGEGPTLVECETYRFRGHSLADPDELRRP-DEKSHYAA-RDP 344 Query: 180 IERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVY--VKGFG 353 I ++K I+ +LAT +ELK +EK+I V+ A+ A SP+P S+L NV+ KGFG Sbjct: 345 ITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVFSDPKGFG 404 Query: 354 VESFGADRKE 383 + G R E Sbjct: 405 IGPDGKYRCE 414
>AK068933:Os12g0183100 | Length = 289 Score = 75.9 bits (185), Expect = 3e-14 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Frame = +3 Query: 6 DVLAVKQACKFAKEHAIANG-PIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 D LAV A A+E AI G PI++E TYR HS SD + YR DEI R RDPI Sbjct: 147 DALAVYSAVHTAREMAIKEGRPILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPI 206 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVY 338 R RK + + + ++ +R+E+ AI A+ P P +ELFT+VY Sbjct: 207 SRYRKWVQGNGWWCDEDESELRNNVRQELLKAIQVAERMPKPPLAELFTDVY 258
>AK064862:Os12g0183100 | Length = 237 Score = 75.9 bits (185), Expect = 3e-14 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Frame = +3 Query: 6 DVLAVKQACKFAKEHAIANG-PIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 D LAV A A+E AI G PI++E TYR HS SD + YR DEI R RDPI Sbjct: 95 DALAVYSAVHTAREMAIKEGRPILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPI 154 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVY 338 R RK + + + ++ +R+E+ AI A+ P P +ELFT+VY Sbjct: 155 SRYRKWVQGNGWWCDEDESELRNNVRQELLKAIQVAERMPKPPLAELFTDVY 206
>AK060732:Os12g0183100 | Length = 486 Score = 75.9 bits (185), Expect = 3e-14 Identities = 46/112 (41%), Positives = 61/112 (54%), Gaps = 1/112 (0%) Frame = +3 Query: 6 DVLAVKQACKFAKEHAIANG-PIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPI 182 D LAV A A+E AI G PI++E TYR HS SD + YR DEI R RDPI Sbjct: 344 DALAVYSAVHTAREMAIKEGRPILVEALTYRVGHHSTSDDSTKYRPVDEIEHWRTARDPI 403 Query: 183 ERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVY 338 R RK + + + ++ +R+E+ AI A+ P P +ELFT+VY Sbjct: 404 SRYRKWVQGNGWWCDEDESELRNNVRQELLKAIQVAERMPKPPLAELFTDVY 455
>AK119646:Os06g0316100 | Length = 304 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +3 Query: 123 GSTYRTRDEISGVRQERDPIERVRKLILAHDLATPAELKDMEKEIRKEVDA 275 G+ ++ RD+ SGV + DP + R+ L + +D EK+ +KE +A Sbjct: 218 GAVWKVRDKASGVSEPEDPTKMKRRAGLVSKIQ-----RDREKQKQKEKEA 263
>AK105260:Os06g0316100 | Length = 304 Score = 30.0 bits (66), Expect = 1.7 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = +3 Query: 123 GSTYRTRDEISGVRQERDPIERVRKLILAHDLATPAELKDMEKEIRKEVDA 275 G+ ++ RD+ SGV + DP + R+ L + +D EK+ +KE +A Sbjct: 218 GAVWKVRDKASGVSEPEDPTKMKRRAGLVSKIQ-----RDREKQKQKEKEA 263
>AK119313:Os12g0194000 | Length = 305 Score = 28.9 bits (63), Expect = 3.7 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -2 Query: 432 RSSSSSGWRPMGV*LSTPFCLRQMT 358 R S+SS RP+ +STPFC MT Sbjct: 250 RHSTSSSARPLSTLISTPFCWEGMT 274
>Os03g0176100:Os03g0176100 | Length = 620 Score = 28.5 bits (62), Expect = 4.8 Identities = 25/84 (29%), Positives = 40/84 (47%) Frame = +3 Query: 12 LAVKQACKFAKEHAIANGPIVLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERV 191 LAV + K K A+G + L T + SD G Y D +S ++ + D E Sbjct: 496 LAVLEDLKALK----ASGVVCLVASTTK------SDEGVVYPEIDPMSKIKFDDDLKELA 545 Query: 192 RKLILAHDLATPAELKDMEKEIRK 263 R ++L P ++ D+EKE++K Sbjct: 546 RSILL------PRDMLDIEKELQK 563
>Os11g0229200:Os11g0229200 | Length = 339 Score = 27.7 bits (60), Expect = 8.2 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 13/72 (18%) Frame = +3 Query: 81 MDTYRYHGHSMSDPGSTYR-------------TRDEISGVRQERDPIERVRKLILAHDLA 221 MD Y YH H M + G + DEI + +E ++ + K L+ +L Sbjct: 87 MDKYLYHAHQMQEDGKMKKFVKGAQYIKIFDEIADEIVRMEEEIKHVKDLMKWSLSAELM 146 Query: 222 TPAELKDMEKEI 257 + D+E++I Sbjct: 147 STNTPDDIERQI 158
>AK059268:Os01g0624500 | Length = 118 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +3 Query: 228 AELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVYVKGFGVESFG 368 AE+K EKE + E DAA+ K DA E +K F VES G Sbjct: 43 AEVKKEEKEEKLEGDAALNKFFRDIYSDADEDMRRAMMKSF-VESNG 88
>AF192467:Os01g0624500 | Length = 367 Score = 27.7 bits (60), Expect = 8.2 Identities = 20/47 (42%), Positives = 24/47 (51%) Frame = +3 Query: 228 AELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVYVKGFGVESFG 368 AE+K EKE + E DAA+ K DA E +K F VES G Sbjct: 292 AEVKKEEKEEKLEGDAALNKFFRDIYSDADEDMRRAMMKSF-VESNG 337 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 18,784,471 Number of extensions: 385975 Number of successful extensions: 940 Number of sequences better than 10.0: 14 Number of HSP's gapped: 939 Number of HSP's successfully gapped: 14 Length of query: 242 Length of database: 15,399,855 Length adjustment: 98 Effective length of query: 144 Effective length of database: 11,475,837 Effective search space: 1652520528 Effective search space used: 1652520528 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
