ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf89h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LOC_Os02g50620:12002.t04646:unspliced-genomic pyruvate dehyd... 83 2e-64
2LOC_Os06g13720:12006.t01247:unspliced-genomic pyruvate dehyd... 81 2e-48
3LOC_Os04g02900:12004.t00184:unspliced-genomic pyruvate dehyd... 58 4e-12
4LOC_Os12g08260:12012.t00708:unspliced-genomic pyruvate dehyd... 49 7e-08
5LOC_Os04g55800:12004.t05052:unspliced-genomic sulfate transp... 34 1.1
6LOC_Os02g31090:12002.t02802:unspliced-genomic collagen-bindi... 33 2.1
7LOC_Os05g21180:12005.t01879:unspliced-genomic expressed protein 29 2.7
8LOC_Os05g27720:12005.t02423:unspliced-genomic transposon pro... 26 3.7
9LOC_Os08g11540:12008.t01036:unspliced-genomic retrotransposo... 28 4.0
10LOC_Os08g40170:12008.t03748:unspliced-genomic cell division ... 32 4.1
11LOC_Os03g39470:12003.t03381:unspliced-genomic retrotransposo... 24 4.3
12LOC_Os01g60230:12001.t05407:unspliced-genomic auxin hydrogen... 32 5.6
13LOC_Os12g27994:12012.t02511:unspliced-genomic expressed protein 32 5.6
14LOC_Os12g09210:12012.t00800:unspliced-genomic retrotransposo... 32 5.6
15LOC_Os09g26080:12009.t02287:unspliced-genomic retrotransposo... 32 5.6
16LOC_Os02g37700:12002.t03408:unspliced-genomic lecithine chol... 25 7.3
17LOC_Os12g29020:12012.t02612:unspliced-genomic retrotransposo... 29 7.5
18LOC_Os03g43930:12003.t03783:unspliced-genomic class III HD-Z... 31 7.6
19LOC_Os03g19870:12003.t01749:unspliced-genomic XPA-binding pr... 27 8.0

>LOC_Os02g50620:12002.t04646:unspliced-genomic pyruvate dehydrogenase E1 component alpha subunit, mitochondrial|
            precursor, putative, expressed
          Length = 4186
 Score = 83.1 bits (175), Expect(7) = 2e-64
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3 / +2

                                              
Query: 72   VLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQER 173
            VLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQ R
Sbjct: 2693 VLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVR 2794



 Score = 62.9 bits (131), Expect(7) = 2e-64
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +2 / +2

                                      
Query: 2    NGCSCCEAGMQICEGACHCKWPNCS* 79
            NGCSCCEAGMQI + AC+CKWPNC *
Sbjct: 1484 NGCSCCEAGMQIRKRACYCKWPNCE* 1561



 Score = 56.5 bits (117), Expect(7) = 2e-64
 Identities = 24/26 (92%), Positives = 25/26 (96%)
 Frame = +3 / +2

                                      
Query: 162  RQERDPIERVRKLILAHDLATPAELK 239
            +QERDPIERVRKLILAHDLAT AELK
Sbjct: 2870 QQERDPIERVRKLILAHDLATAAELK 2947



 Score = 54.2 bits (112), Expect(7) = 2e-64
 Identities = 21/23 (91%), Positives = 22/23 (95%)
 Frame = +3 / +3

                                   
Query: 291  KESPMPDASELFTNVYVKGFGVE 359
            +ESPMPD SELFTNVYVKGFGVE
Sbjct: 3225 QESPMPDTSELFTNVYVKGFGVE 3293



 Score = 39.6 bits (80), Expect(7) = 2e-64
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +3 / +2

                               
Query: 237  KDMEKEIRKEVDAAIAKAK 293
            +DMEKEIRKEVD AIAKAK
Sbjct: 3077 QDMEKEIRKEVDDAIAKAK 3133



 Score = 39.6 bits (80), Expect(7) = 2e-64
 Identities = 17/28 (60%), Positives = 19/28 (67%)
 Frame = +1 / +1

                                        
Query: 436  FF*HDEILRRNKHW*TNPCVLLAVFVAK 519
            FF*+D I  RNKHW* +P   L  FVAK
Sbjct: 3844 FF*YDMIAWRNKHW*RSPQAFLPFFVAK 3927



 Score = 36.3 bits (73), Expect(7) = 2e-64
 Identities = 14/21 (66%), Positives = 17/21 (80%)
 Frame = +2 / +2

                                 
Query: 359  VIWRRQKGVESYTPIGRQPED 421
            VIW RQ+G+ESY+ IG Q ED
Sbjct: 3770 VIWGRQEGIESYSSIG*QRED 3832



 Score = 71.2 bits (149), Expect(7) = 9e-53
 Identities = 31/33 (93%), Positives = 32/33 (96%)
 Frame = -1 / -2

                                             
Query: 169  SCLTPEISSLVR*VLPGSDIE*PWYL*VSISRT 71
            +CLTPEISSLVR*VLPGSDIE PWYL*VSISRT
Sbjct: 2790 TCLTPEISSLVR*VLPGSDIEWPWYL*VSISRT 2692



 Score = 59.7 bits (124), Expect(7) = 9e-53
 Identities = 23/24 (95%), Positives = 24/24 (100%)
 Frame = -1 / -1

                                    
Query: 73   TIGPFAMACSFANLHACFTARTSI 2
            TIGPFA+ACSFANLHACFTARTSI
Sbjct: 1555 TIGPFAIACSFANLHACFTARTSI 1484



 Score = 55.6 bits (115), Expect(7) = 9e-53
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = -2 / -3

                                      
Query: 240  P*AQQGLLGHEPRSTF*PFQLDHAPV 163
            P*AQQ LLGHEP+ST *PFQLDHAPV
Sbjct: 2948 P*AQQQLLGHEPKSTS*PFQLDHAPV 2871



 Score = 40.5 bits (82), Expect(7) = 9e-53
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = -2 / -2

                                              
Query: 519  FCNKNCQQHTRVCSPMLISSQYLIVLEEDRSSSS 418
            FCNK  Q+  R  SPMLIS  Y I+LEE    SS
Sbjct: 3927 FCNKEWQKCLRTSSPMLISPGYHIILEEIMPPSS 3826



 Score = 40.5 bits (82), Expect(7) = 9e-53
 Identities = 17/30 (56%), Positives = 21/30 (70%)
 Frame = -3 / -3

                                          
Query: 359  LNAETLDVDICKELRSIRHRTFLSFSNRSV 270
            L+ +TLD+ I KELRSIRHRT L    R +
Sbjct: 3293 LHTKTLDIYIRKELRSIRHRTLLQILKRGI 3204



 Score = 32.2 bits (64), Expect(7) = 9e-53
 Identities = 14/22 (63%), Positives = 15/22 (68%)
 Frame = -3 / -3

                                  
Query: 422  HLQVGGLWECSSQLLSVCAK*L 357
            HL V  LW+ SSQ L VC K*L
Sbjct: 3833 HLLVVSLWKSSSQFLPVCPK*L 3768



 Score = 31.8 bits (63), Expect(7) = 9e-53
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -3 / -1

                               
Query: 293  LSFSNRSVDFFPNFFLHVL 237
            L F N  +DFF +FFLHVL
Sbjct: 3133 LCFRNGIIDFFSDFFLHVL 3077



 Score = 59.3 bits (123), Expect(7) = 6e-44
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +3 / +3

                                       
Query: 3    MDVLAVKQACKFAKEHAIANGPIVLEM 83
            MDVLAVKQACKFAKEHAIANGPIV ++
Sbjct: 1485 MDVLAVKQACKFAKEHAIANGPIVSKL 1565



 Score = 57.9 bits (120), Expect(7) = 6e-44
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +1 / +3

                                            
Query: 73   FLKWTPIGTTVTLCQIQEALTAPGMKSRV*DR 168
            FLKW P GT   LCQI EALT PGM+S+V*DR
Sbjct: 2694 FLKWIPTGTMAILCQIPEALTVPGMRSQV*DR 2789



 Score = 48.7 bits (100), Expect(7) = 6e-44
 Identities = 23/26 (88%), Positives = 24/26 (92%)
 Frame = +2 / +1

                                      
Query: 164  TGA*SN*KG*KVDLGS*PSNPC*AQG 241
            TGA*SN*KG*+VD GS*PSN C*AQG
Sbjct: 2872 TGA*SN*KG*EVDFGS*PSNCC*AQG 2949



 Score = 46.0 bits (94), Expect(7) = 6e-44
 Identities = 23/37 (62%), Positives = 27/37 (72%)
 Frame = +3 / +3

                                                 
Query: 354  VESFGADRKELRATLP*AANLKMKMSDLLLTR*DIEK 464
            ++SFGADRKELRATLP*A N KM    LL+    +EK
Sbjct: 3765 LQSFGADRKELRATLP*ADNEKMAALFLLI*YDSLEK 3875



 Score = 34.5 bits (69), Expect(7) = 6e-44
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +2 / +2

                               
Query: 293  GKSYA*CF*ALYKCLRQGF 349
            G+SYA* F*ALY+C+ QGF
Sbjct: 3227 GESYA*YF*ALYECICQGF 3283



 Score = 31.3 bits (62), Expect(7) = 6e-44
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2 / +1

                               
Query: 239  GHGERN*ERSRRCDC*S*G 295
            GHGERN +RSR C C S G
Sbjct: 3079 GHGERNQKRSR*CHCESKG 3135



 Score = 23.1 bits (44), Expect(7) = 6e-44
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3 / +3

                                  
Query: 453  DIEKK*ALVNKPLCVAGSFCCK 518
            D  +K*ALV K   ++   CCK
Sbjct: 3861 DSLEK*ALVKKSSGISAILCCK 3926



 Score = 59.3 bits (123), Expect(6) = 4e-40
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = -2 / -3

                                             
Query: 171  APVLHPRFHPWCGKCFLDLT*SDRGTYRCPFQE 73
            +PVLH R HPW GKCF DLT*+  GT R PFQE
Sbjct: 2792 SPVLHLRSHPWYGKCFRDLT*NGHGTCRYPFQE 2694



 Score = 55.6 bits (115), Expect(6) = 4e-40
 Identities = 20/26 (76%), Positives = 22/26 (84%)
 Frame = -3 / -3

                                      
Query: 80   FKNNWAICNGMLLRKFACLLHSKNIH 3
            F +NWAICN ML  +FACLLHSKNIH
Sbjct: 1562 FTHNWAICNSMLFCEFACLLHSKNIH 1485



 Score = 51.5 bits (106), Expect(6) = 4e-40
 Identities = 21/25 (84%), Positives = 22/25 (88%)
 Frame = -3 / -1

                                     
Query: 239  LELSRGC*VMSQDQLSNPFNWITLL 165
            LELS  C*VMSQ+QL NPFNWITLL
Sbjct: 2947 LELSSSC*VMSQNQLPNPFNWITLL 2873



 Score = 48.7 bits (100), Expect(6) = 4e-40
 Identities = 29/61 (47%), Positives = 33/61 (54%)
 Frame = -1 / -1

                                                                        
Query: 541  LTSLYRFVLQQKLPATHKGLFTNAYFFSISHRVRRRSLIFIFRLAAYGSVALNSFLSAPN 362
            LT LY     Q+  A     F    +FS      RR+   IF L+AYG VALNSFLSAPN
Sbjct: 3952 LTHLYTGSFLQQRMAEMPEDFFTNAYFSRLSYHIRRNNAAIFSLSAYGRVALNSFLSAPN 3773

             
Query: 361  D 359
            D
Sbjct: 3772 D 3770



 Score = 27.6 bits (54), Expect(6) = 4e-40
 Identities = 13/19 (68%), Positives = 13/19 (68%)
 Frame = -2 / -3

                               
Query: 294  P*L*QSQRRLLS*FLSPCP 238
            P L Q   RLL *FLSPCP
Sbjct: 3134 PLLSQWHHRLLF*FLSPCP 3078



 Score = 27.2 bits (53), Expect(6) = 4e-40
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -1 / -1

                        
Query: 358  STPKPLT*TFVK 323
            STPKPLT TFVK
Sbjct: 3292 STPKPLTYTFVK 3257



 Score = 58.3 bits (121), Expect(5) = 1e-31
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = -3 / -1

                                            
Query: 167  LSYTRDFIPGAVSASWI*HRVTVVPIGVHFKN 72
            LSYT D IPG VSAS I*HR+ +VP+G+HFKN
Sbjct: 2788 LSYT*DLIPGTVSASGI*HRMAMVPVGIHFKN 2693



 Score = 51.0 bits (105), Expect(5) = 1e-31
 Identities = 20/24 (83%), Positives = 21/24 (87%)
 Frame = -2 / -2

                                    
Query: 72   QLGHLQWHAPSQICMPASQQEHPF 1
            QLGHLQ HA  +ICMPASQQEHPF
Sbjct: 1554 QLGHLQ*HALLRICMPASQQEHPF 1483



 Score = 46.9 bits (96), Expect(5) = 1e-31
 Identities = 21/22 (95%), Positives = 21/22 (95%)
 Frame = -1 / -2

                                  
Query: 229  AGVARS*AKINFLTLSIGSRSC 164
            A VARS*AKINFLTLSIGSRSC
Sbjct: 2937 AAVARS*AKINFLTLSIGSRSC 2872



 Score = 37.3 bits (75), Expect(5) = 1e-31
 Identities = 17/28 (60%), Positives = 18/28 (64%)
 Frame = -3 / -3

                                        
Query: 518  FATKTASNTQGFVHQCLFLLNISSC*KK 435
            FATK   N  G +HQCLFL  I S *KK
Sbjct: 3926 FATKNGRNA*GLLHQCLFLQAIISY*KK 3843



 Score = 28.1 bits (55), Expect(5) = 1e-31
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = -2 / -2

                                          
Query: 447  VLEEDRSSSSSGWRPMGV*LSTPFCLRQMT 358
            ++ E+    SS  +PM  *LS P CL QMT
Sbjct: 3858 IILEEIMPPSSRCQPMEE*LSIPSCLPQMT 3769



 Score = 56.5 bits (117), Expect(4) = 5e-23
 Identities = 24/32 (75%), Positives = 27/32 (84%)
 Frame = +2 / +1

                                            
Query: 74   S*NGHL*VPRSLYVRSRKHLPHQG*NLGCKTG 169
            S*NG+L VP   YVRSRKHLP+QG*+L CKTG
Sbjct: 2695 S*NGYLQVPWPFYVRSRKHLPYQG*DLRCKTG 2790



 Score = 45.5 bits (93), Expect(4) = 5e-23
 Identities = 19/24 (79%), Positives = 22/24 (91%)
 Frame = +1 / +1

                                    
Query: 1    KWMFLL*SRHANLRRSMPLQMAQL 72
            +WMFLL*SRHAN ++SM LQMAQL
Sbjct: 1483 EWMFLL*SRHANSQKSMLLQMAQL 1554



 Score = 45.1 bits (92), Expect(4) = 5e-23
 Identities = 22/26 (84%), Positives = 23/26 (88%)
 Frame = +1 / +3

                                      
Query: 163  DRSVIQLKGLES*SWLMT*QPLLSSR 240
            +RSVIQLKGL S* WLMT*Q LLSSR
Sbjct: 2871 NRSVIQLKGLGS*FWLMT*QLLLSSR 2948



 Score = 26.3 bits (51), Expect(4) = 5e-23
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = +1 / +1

                                   
Query: 358  SHLAQTERS*ELHSHRPPT*R*R 426
            SHL QT R+*EL  HR  T R R
Sbjct: 3769 SHLGQTGRN*ELLFHRLTTRRWR 3837



 Score = 33.1 bits (66), Expect = 2.2
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -1 / -1

                                         
Query: 517  LQQKLPATHKGLFTNAYFFSISHRVRRRS 431
            LQQ++    +  FTNAYF  +S+ +RR +
Sbjct: 3925 LQQRMAEMPEDFFTNAYFSRLSYHIRRNN 3839



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>LOC_Os06g13720:12006.t01247:unspliced-genomic pyruvate dehydrogenase E1 component alpha subunit, mitochondrial|
            precursor, putative, expressed
          Length = 3449

 Score = 81.3 bits (171), Expect(6) = 2e-48
 Identities = 30/35 (85%), Positives = 34/35 (97%)
 Frame = +3 / +3

                                               
Query: 72   VLEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERD 176
            +LEMDTYRYHGHSMSDPGSTYRTRDEI+G+RQ R+
Sbjct: 1986 ILEMDTYRYHGHSMSDPGSTYRTRDEIAGIRQVRN 2090



 Score = 55.6 bits (115), Expect(6) = 2e-48
 Identities = 22/26 (84%), Positives = 24/26 (92%)
 Frame = +3 / +2

                                      
Query: 3    MDVLAVKQACKFAKEHAIANGPIVLE 80
            MDVLAVKQACKFAK+HA+ NGPIV E
Sbjct: 1712 MDVLAVKQACKFAKQHALENGPIVSE 1789



 Score = 51.5 bits (106), Expect(6) = 2e-48
 Identities = 21/26 (80%), Positives = 23/26 (88%)
 Frame = +3 / +3

                                      
Query: 162  RQERDPIERVRKLILAHDLATPAELK 239
            +QERDPIERVRKL+LAHD AT  ELK
Sbjct: 2184 QQERDPIERVRKLLLAHDFATTQELK 2261



 Score = 43.2 bits (88), Expect(6) = 2e-48
 Identities = 17/23 (73%), Positives = 19/23 (82%)
 Frame = +3 / +2

                                   
Query: 291  KESPMPDASELFTNVYVKGFGVE 359
            +ESPMPD SELFTNVYV   G+E
Sbjct: 2636 QESPMPDPSELFTNVYVNDCGLE 2704



 Score = 38.6 bits (78), Expect(6) = 2e-48
 Identities = 16/18 (88%), Positives = 17/18 (94%)
 Frame = +3 / +3

                              
Query: 240  DMEKEIRKEVDAAIAKAK 293
            DMEKEIRK+VD AIAKAK
Sbjct: 2496 DMEKEIRKQVDTAIAKAK 2549



 Score = 26.7 bits (52), Expect(6) = 2e-48
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3 / +3

                               
Query: 354  VESFGADRKELRATLP*AA 410
            ++SFG DRK +R  LP* +
Sbjct: 3105 MQSFGVDRKVVRTVLP*GS 3161



 Score = 63.4 bits (132), Expect(6) = 1e-29
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = -1 / -2

                                            
Query: 169  SCLTPEISSLVR*VLPGSDIE*PWYL*VSISR 74
            +CL P ISSLVR*VLPGSDIE PWYL*VSISR
Sbjct: 2083 TCLMPAISSLVR*VLPGSDIECPWYL*VSISR 1988



 Score = 46.9 bits (96), Expect(6) = 1e-29
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = -1 / -3

                                      
Query: 79   SRTIGPFAMACSFANLHACFTARTSI 2
            S TIGPF+ AC  ANL AC TARTSI
Sbjct: 1788 SLTIGPFSRACCLANLQACLTARTSI 1711



 Score = 36.8 bits (74), Expect(6) = 1e-29
 Identities = 17/28 (60%), Positives = 17/28 (60%)
 Frame = -3 / -1

                                        
Query: 239  LELSRGC*VMSQDQLSNPFNWITLLSYT 156
            LE   GC VM Q  L NPFNWI LL  T
Sbjct: 2261 LEFLCGCKVMGQ**LPNPFNWIALLLVT 2178



 Score = 30.4 bits (60), Expect(6) = 1e-29
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3 / -2

                                     
Query: 359  LNAETLDVDICKELRSIRHRTFLSF 285
            L    +++ ICKELR I H TFL +
Sbjct: 2704 LQTAVINIYICKELRWIGHWTFLQY 2630



 Score = 29.5 bits (58), Expect(6) = 1e-29
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -3 / -1

                               
Query: 293  LSFSNRSVDFFPNFFLHVL 237
            L F + SVD  P FFLHVL
Sbjct: 2549 LCFRDGSVDLLPYFFLHVL 2493



 Score = 24.9 bits (48), Expect(6) = 1e-29
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -1 / -2

                          
Query: 400  GSVALNSFLSAPND 359
            GS  L +FLS PND
Sbjct: 3151 GSTVLTTFLSTPND 3110



 Score = 54.7 bits (113), Expect(5) = 2e-18
 Identities = 23/32 (71%), Positives = 27/32 (84%)
 Frame = +2 / +2

                                            
Query: 74   S*NGHL*VPRSLYVRSRKHLPHQG*NLGCKTG 169
            S*+GHL +PR+LYVRSR+HLPHQ *N   KTG
Sbjct: 1988 S*DGHLQIPRTLYVRSREHLPHQR*NCRHKTG 2083



 Score = 35.9 bits (72), Expect(5) = 2e-18
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2 / +1

                                     
Query: 5    GCSCCEAGMQICEGACHCKWPNCS* 79
            GCSC +  + IC+  C  KW +C *
Sbjct: 1714 GCSCSQTSL*ICQATCS*KWTDCK* 1788



 Score = 32.7 bits (65), Expect(5) = 2e-18
 Identities = 16/26 (61%), Positives = 18/26 (69%)
 Frame = +1 / +1

                                      
Query: 163  DRSVIQLKGLES*SWLMT*QPLLSSR 240
            +RS IQLKGL S  W MT QP  +SR
Sbjct: 2185 NRSAIQLKGLGSYYWPMTLQPHKNSR 2262



 Score = 28.1 bits (55), Expect(5) = 2e-18
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +2 / +2

                             
Query: 227  C*AQGHGERN*ERSRRC 277
            C   GHGERN E SR C
Sbjct: 2483 CFFLGHGERNKEASRHC 2533



 Score = 23.1 bits (44), Expect(5) = 2e-18
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = +2 / +1

                           
Query: 293  GKSYA*CF*ALYKCL 337
            GKS A   *ALYKC+
Sbjct: 2638 GKSNARSI*ALYKCI 2682



 Score = 57.0 bits (118), Expect(4) = 4e-13
 Identities = 24/35 (68%), Positives = 25/35 (71%)
 Frame = -2 / -3

                                               
Query: 177  DHAPVLHPRFHPWCGKCFLDLT*SDRGTYRCPFQE 73
            D  PVL  +FH WCGKC LDLT*S RG  RCP QE
Sbjct: 2091 DS*PVLCLQFHLWCGKCSLDLT*SVRGICRCPSQE 1987



 Score = 28.1 bits (55), Expect(4) = 4e-13
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3 / -2

                                      
Query: 80   FKNNWAICNGMLLRKFACLLHSKNIH 3
            F  N +I   MLL KF  L   KNIH
Sbjct: 1789 FTYNRSIFKSMLLGKFTSLFDCKNIH 1712



 Score = 27.6 bits (54), Expect(4) = 4e-13
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -2 / -3

                                      
Query: 240  P*AQQGLLGHEPRSTF*PFQLDHAPV 163
            P*    L  H P    *PFQLD APV
Sbjct: 2262 P*VLVWLQSHGPVVAS*PFQLDRAPV 2185



 Score = 24.9 bits (48), Expect(4) = 4e-13
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2 / -3

                               
Query: 294  P*L*QSQRRLLS*FLSPCP 238
            P L + Q RL S FLSPCP
Sbjct: 2550 PLLSRWQCRLASLFLSPCP 2494



 Score = 61.6 bits (128), Expect = 6e-09
 Identities = 27/41 (65%), Positives = 31/41 (75%)
 Frame = +1 / +1

                                                     
Query: 73   FLKWTPIGTTVTLCQIQEALTAPGMKSRV*DRSVIQLKGLE 195
            FL+WTP  TT TLCQIQ ALTAP MK + *DRS I++ G E
Sbjct: 1987 FLRWTPTDTTDTLCQIQGALTAPEMKLQA*DRSGIRMAGHE 2109



 Score = 56.1 bits (116), Expect = 3e-07
 Identities = 23/32 (71%), Positives = 26/32 (81%)
 Frame = -3 / -1

                                            
Query: 167  LSYTRDFIPGAVSASWI*HRVTVVPIGVHFKN 72
            LSY  +FI GAVSA WI*HRV+VV +GVH KN
Sbjct: 2081 LSYACNFISGAVSAPWI*HRVSVVSVGVHLKN 1986



 Score = 35.4 bits (71), Expect = 0.44
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = -1 / -2

                                          
Query: 223  VARS*AKINFLTLSIGSRSCLTPEISSLVR 134
            VA+S A  +FLTLSIGSRSC     ++L+R
Sbjct: 2245 VAKSWASSSFLTLSIGSRSCW*HNTNNLLR 2156



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>LOC_Os04g02900:12004.t00184:unspliced-genomic pyruvate dehydrogenase E1 component alpha subunit, putative,|
            expressed
          Length = 4061

 Score = 58.3 bits (121), Expect(2) = 4e-12
 Identities = 25/56 (44%), Positives = 37/56 (66%)
 Frame = +3 / +2

                                                                    
Query: 171  RDPIERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKESPMPDASELFTNVY 338
            RDPI  ++K I+  +LAT +ELK +EK+I   V+ A+  A  SP+P  S+L  NV+
Sbjct: 3188 RDPITALKKYIIEQNLATESELKSIEKKIDDVVEEAVEFADASPLPPRSQLLENVF 3355



 Score = 37.3 bits (75), Expect(2) = 4e-12
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +3 / +2

                                     
Query: 63   GPIVLEMDTYRYHGHSMSDPGSTYR 137
            GP ++E +TYR+ GHS++DP    R
Sbjct: 1958 GPTLVECETYRFRGHSLADPDELRR 2032



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>LOC_Os12g08260:12012.t00708:unspliced-genomic pyruvate dehydrogenase E1 component, alpha subunit, putative,|
            expressed
          Length = 4327

 Score = 49.2 bits (101), Expect(2) = 7e-08
 Identities = 23/61 (37%), Positives = 31/61 (50%)
 Frame = +3 / +1

                                                                        
Query: 87   TYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATPAELKDMEKEIRKE 266
            TYR   HS SD  + YR  DEI   R  RDPI R RK +  +      +  ++   +R+E
Sbjct: 3340 TYRVGHHSTSDDSTKYRPVDEIEHWRTARDPISRYRKWVQGNGWWCDEDESELRNNVRQE 3519

             
Query: 267  V 269
            V
Sbjct: 3520 V 3522



 Score = 27.2 bits (53), Expect(2) = 7e-08
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = +3 / +1

                                 
Query: 276  AIAKAKESPMPDASELFTNVY 338
            AI  A+  P P  +ELFT+VY
Sbjct: 3616 AIQVAERMPKPPLAELFTDVY 3678



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>LOC_Os04g55800:12004.t05052:unspliced-genomic sulfate transporter 3.3, putative, expressed|
          Length = 5617

 Score = 34.1 bits (68), Expect = 1.1
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2 / +1

                                
Query: 174  HAPVLHPRFHPWCGKCFLDL 115
            H PV+HP  HPW   C   L
Sbjct: 1168 HPPVIHPSIHPWLAACSCSL 1227



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>LOC_Os02g31090:12002.t02802:unspliced-genomic collagen-binding protein, putative|
          Length = 627

 Score = 33.1 bits (66), Expect = 2.1
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3 / +1

                                                               
Query: 144 DEISGVRQERDPIERVRKLILAHDLATPAELKDMEKEIRKEVDAAIAKAKES 299
           D  SG  +E D +ER+R+ + A        L+++EKE R    AA    +E+
Sbjct: 286 DTNSGGAEEGDNVERLRRRLTAEGRWREVALEELEKERRAAASAAAELEQEA 441



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>LOC_Os05g21180:12005.t01879:unspliced-genomic expressed protein|
          Length = 4554

 Score = 28.6 bits (56), Expect(3) = 2.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2 / +2

                                   
Query: 477 PMLISSQYLIVLEEDRSSSSSGWR 406
           P+L+SS +L   EE +   S+ WR
Sbjct: 359 PLLLSSSFLCCKEEGKEGKSTPWR 430



 Score = 22.6 bits (43), Expect(3) = 2.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3 / +1

                       
Query: 260  PNFFLHVLELS 228
            PN  LH++ELS
Sbjct: 1714 PNILLHIMELS 1746



 Score = 22.6 bits (43), Expect(3) = 2.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3 / +3

                          
Query: 59   CNGMLLRKFACLLH 18
            CN +LL  F CLL+
Sbjct: 2979 CNTVLLAYFRCLLY 3020



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>LOC_Os05g27720:12005.t02423:unspliced-genomic transposon protein, putative, CACTA, En/Spm sub-class|
          Length = 4745

 Score = 25.8 bits (50), Expect(2) = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3 / +2

                                
Query: 143  PGAVSASWI*HRVTVVPIGV 84
            PG  S  W+   +T+VP+GV
Sbjct: 3290 PGIFSPGWLLKILTLVPVGV 3349



 Score = 23.5 bits (45), Expect(2) = 3.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -3 / +3

                                          
Query: 104  TVVPIGVHFKNNWAICNGMLLRKFACLLHS 15
            ++VP+G  F   W    G+ +  + CLL S
Sbjct: 3360 SLVPVGNIFSPGW*YQLGLKIPLYICLLPS 3449



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>LOC_Os08g11540:12008.t01036:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 2873

 Score = 28.1 bits (55), Expect(2) = 4.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +3 / +1

                                                  
Query: 156  GVRQERDPIERVRKLILAHDLATPAELKDMEKEIRKEV 269
            G+RQ    + RV K +    L   AEL+D    ++KEV
Sbjct: 1852 GLRQAAAMLHRVTKRLNDQKLVRIAELQDENARLKKEV 1965



 Score = 25.4 bits (49), Expect(2) = 4.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2 / +2

                        
Query: 35  ICEGACHCKWPNC 73
           +CEG+CH  +P C
Sbjct: 131 LCEGSCHGLFPVC 169



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>LOC_Os08g40170:12008.t03748:unspliced-genomic cell division control protein 2 homolog D, putative, expressed|
          Length = 1944

 Score = 32.2 bits (64), Expect = 4.1
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2 / +1

                                   
Query: 5   GCSCCEAGMQICEGACHCKWPNCS 76
           GC+C +  +   +G C   WP C+
Sbjct: 595 GCACADPDVPALQGRCFLPWPRCA 666



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>LOC_Os03g39470:12003.t03381:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 1870

 Score = 24.4 bits (47), Expect(3) = 4.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3 / +1

                               
Query: 642  SDLASIIASVCKILRWKLM 698
            SD    + S+C  LRWKL+
Sbjct: 1360 SDFGRHVESLCFRLRWKLL 1416



 Score = 23.1 bits (44), Expect(3) = 4.3
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = +2 / +3

                     
Query: 35 ICEGACHCKWP 67
          +CEG CH  +P
Sbjct: 24 LCEGYCHSSFP 56



 Score = 23.1 bits (44), Expect(3) = 4.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2 / +1

                       
Query: 371 RQKGVESYTPIG 406
           RQ+GVE Y+P G
Sbjct: 808 RQQGVEGYSPEG 843



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>LOC_Os01g60230:12001.t05407:unspliced-genomic auxin hydrogen symporter, putative, expressed|
          Length = 5244

 Score = 31.8 bits (63), Expect = 5.6
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +3 / -2

                                 
Query: 483  KPLCVAGSFCCKTNLYRDVKC 545
            K LC+  + CC+T +YR+V C
Sbjct: 2726 KNLCIV*NSCCQTTVYRNVLC 2664



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>LOC_Os12g27994:12012.t02511:unspliced-genomic expressed protein|
          Length = 7684

 Score = 31.8 bits (63), Expect = 5.6
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2 / -1

                                 
Query: 11   SCCEAGMQICEGACHCKWPNC 73
            SCC  G+  C  AC C W  C
Sbjct: 3376 SCCGVGVYPCPCACACAWACC 3314



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>LOC_Os12g09210:12012.t00800:unspliced-genomic retrotransposon protein, putative, unclassified, expressed|
          Length = 2794

 Score = 31.8 bits (63), Expect = 5.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2 / +3

                                     
Query: 432  RSSSSSGWRPMGV*LSTPFCLRQMT 358
            R S+SS  RP+   +STPFC   MT
Sbjct: 1425 RHSTSSSARPLSTLISTPFCWEGMT 1499



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>LOC_Os09g26080:12009.t02287:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1601

 Score = 31.8 bits (63), Expect = 5.6
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = -2 / -2

                       
Query: 174 HAPVLHPRFHPW 139
           H P++HP++HPW
Sbjct: 211 HPPIVHPQYHPW 176



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>LOC_Os02g37700:12002.t03408:unspliced-genomic lecithine cholesterol acyltransferase-like protein, putative,|
           expressed
          Length = 1803

 Score = 25.4 bits (49), Expect(2) = 7.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3 / -3

                                
Query: 339 VKGFGVESFGADRKELRATLP 401
           + G G+E    +RKELRA  P
Sbjct: 673 IPGQGLEEHDGNRKELRACCP 611



 Score = 23.1 bits (44), Expect(2) = 7.3
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +3 / -1

                                                           
Query: 96  YHGHSMSDPGSTYRTRDEISGVRQERDPIERVRKLILAHDLATPAELK 239
           +H   +  PG     R E  G  + RD  E +  L+       P ELK
Sbjct: 933 WHVEQVVRPGGKVLHRVEQPGGERRRDQEEVLDVLLSPRQRGVPDELK 790



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>LOC_Os12g29020:12012.t02612:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass|
          Length = 5933

 Score = 29.5 bits (58), Expect(2) = 7.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2 / +3

                             
Query: 189 PFQLDHAPVLHPRFHPWC 136
           P Q    P+LHPR HP C
Sbjct: 654 PLQTPS*PILHPRTHPSC 707



 Score = 24.0 bits (46), Expect(2) = 7.5
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2 / +1

                       
Query: 108  SDRGTYRCPFQ 76
            +DRGT RCP Q
Sbjct: 4480 ADRGTVRCPCQ 4512



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>LOC_Os03g43930:12003.t03783:unspliced-genomic class III HD-Zip protein 4, putative, expressed|
          Length = 5851

 Score = 31.3 bits (62), Expect = 7.6
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = -3 / +3

                                                              
Query: 437  KIAHLHLQVGGLWECSSQLLSVCAK*LNAETLDVDICKELRSIRHRTFLS 288
            +IAHL + + G+W CS   L V  + L+  T       ++ +IR    LS
Sbjct: 2532 RIAHLGIAIAGVWMCSMLSLRVMVELLSLSTCRYASFYDMVNIRCALILS 2681



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>LOC_Os03g19870:12003.t01749:unspliced-genomic XPA-binding protein 1, putative, expressed|
          Length = 6363

 Score = 27.2 bits (53), Expect(2) = 8.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -1 / +1

                               
Query: 400  GSVALNSFLSAPNDSTPKP 344
            G+  ++SF SAPN + P P
Sbjct: 3871 GTAGMHSFKSAPNTAAPSP 3927



 Score = 26.3 bits (51), Expect(2) = 8.0
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -3 / +1

                                 
Query: 476  QCLFLLNISSC*KKIAHLHLQ 414
            +C F LN++ C   + HL+LQ
Sbjct: 2905 ECHFALNVNRCYYLVIHLNLQ 2967


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 277,074,213
Number of extensions: 4224444
Number of successful extensions: 13887
Number of sequences better than 10.0: 19
Length of query: 242
Length of database: 55,613,886
Length adjustment: 49
Effective length of query: 193
Effective length of database: 52,856,264
Effective search space: 10201258952
Effective search space used: 10201258952
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
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