Clone Name | FLbaf92h18 |
---|---|
Clone Library Name | barley_pub |
>AK099536:Os07g0656800 | Length = 185 Score = 107 bits (267), Expect = 1e-23 Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 15/103 (14%) Frame = +3 Query: 93 LARAPCRPRAMSSWSPPLPPRGAEEEGDTRS---------------GGGAVFSYGEARYW 227 LAR+P P A ++ PP P EEEG RS GGG SYG+A YW Sbjct: 21 LARSP--PPAAAAAMPPSSPE-PEEEGMGRSDAGVGGGGGGEGGGGGGGRALSYGKAEYW 77 Query: 228 DARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCGSA 356 DARY+EEGGAPYD YQRYAALRPFVRRF PP R+ +IGCGSA Sbjct: 78 DARYVEEGGAPYDWYQRYAALRPFVRRFAPPESRVLMIGCGSA 120
>AK105822:Os01g0962500 | Length = 551 Score = 75.1 bits (183), Expect = 6e-14 Identities = 42/75 (56%), Positives = 50/75 (66%) Frame = +3 Query: 360 YNLLEETSLVRELAHRLLGDFGGNFGRNFEGCSGAKLPPSLVALCKAAER*SVRLFFLPR 539 Y+ LEET V E AHRL+G FG N+G G GA+LP L L KAA+R + L FLPR Sbjct: 87 YSFLEETKQVAESAHRLIGAFGRNYG----GFGGAQLPKWLFYLRKAAQRRGIWLQFLPR 142 Query: 540 GMTRRAQNRSWHDNR 584 GM RR QNRS H++R Sbjct: 143 GMARREQNRSRHNHR 157
>AK073163:Os01g0962500 | Length = 551 Score = 75.1 bits (183), Expect = 6e-14 Identities = 42/75 (56%), Positives = 50/75 (66%) Frame = +3 Query: 360 YNLLEETSLVRELAHRLLGDFGGNFGRNFEGCSGAKLPPSLVALCKAAER*SVRLFFLPR 539 Y+ LEET V E AHRL+G FG N+G G GA+LP L L KAA+R + L FLPR Sbjct: 87 YSFLEETKQVAESAHRLIGAFGRNYG----GFGGAQLPKWLFYLRKAAQRRGIWLQFLPR 142 Query: 540 GMTRRAQNRSWHDNR 584 GM RR QNRS H++R Sbjct: 143 GMARREQNRSRHNHR 157
>AK105385:Os08g0517600 | Length = 197 Score = 61.2 bits (147), Expect = 9e-10 Identities = 29/62 (46%), Positives = 39/62 (62%) Frame = +3 Query: 171 GDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCG 350 G GG A +YGEA YWD RY +E G P+D YQ+Y AL P + +V +RL + GCG Sbjct: 4 GGGGGGGTAAQAYGEAWYWDERYRKEAG-PFDWYQKYPALAPLLAVYVRRHHRLLLAGCG 62 Query: 351 SA 356 ++ Sbjct: 63 NS 64
>AK073374:Os08g0517600 | Length = 241 Score = 61.2 bits (147), Expect = 9e-10 Identities = 29/62 (46%), Positives = 39/62 (62%) Frame = +3 Query: 171 GDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCG 350 G GG A +YGEA YWD RY +E G P+D YQ+Y AL P + +V +RL + GCG Sbjct: 4 GGGGGGGTAAQAYGEAWYWDERYRKEAG-PFDWYQKYPALAPLLAVYVRRHHRLLLAGCG 62 Query: 351 SA 356 ++ Sbjct: 63 NS 64
>AK108864: | Length = 72 Score = 32.3 bits (72), Expect = 0.44 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +2 Query: 686 CWVLFLCTCTCRSILLCTCKIILMCPC 766 C V+ +C C C + +C C + +C C Sbjct: 19 CCVVCVCVCVCVCVCVCVCVCVCVCAC 45 Score = 31.2 bits (69), Expect = 0.98 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +2 Query: 677 LCICWVLFLCTCTCRSILLCTCKIILMC 760 +C+C + +C C C + +C C + C Sbjct: 22 VCVCVCVCVCVCVCVCVCVCVCACVRAC 49 Score = 28.9 bits (63), Expect = 4.9 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%) Frame = +2 Query: 656 WN-----SLYVRLCICWVLFLCTCTCRSILLCTCKIILMC 760 WN SL R C + +C C C + +C C + C Sbjct: 6 WNGGFCISLAQRACCVVCVCVCVCVCVCVCVCVCVCVCAC 45
>AK110145:Os09g0535200 | Length = 861 Score = 31.2 bits (69), Expect = 0.98 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +3 Query: 48 PSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGA 161 P+A + LRLP P RAP P A ++ P PP A Sbjct: 688 PTAPLSLRLPAPHLRARRAPTSPPAAATPRAPTPPAAA 725
>Os02g0168400:Os02g0168400 | Length = 962 Score = 30.8 bits (68), Expect = 1.3 Identities = 19/38 (50%), Positives = 21/38 (55%) Frame = +3 Query: 84 AHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 +H LA AP R R+ SPP P R A EE D GG A Sbjct: 30 SHALAAAPRRARSGRHASPP-PQRVAPEEEDDGGGGAA 66
>Os04g0388600:Os04g0388600 | Length = 148 Score = 30.4 bits (67), Expect = 1.7 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%) Frame = +3 Query: 132 WSPPLPP-RGAEEEGDTRSGGGAVFSYGEARYWDARYMEEG-----GAPYDCYQRYAA 287 WSPP PP A E + +S G S+ E R W+A M A C +R AA Sbjct: 70 WSPPAPPAAAAAAEEEDQSVGLQSSSFMEERIWNAAAMVSSRWRCPSAAISCRRRAAA 127
>Os01g0575500:Os01g0575500 | Length = 1248 Score = 30.0 bits (66), Expect = 2.2 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 769 LTRAHQNNFTCTQQDT-STSASAQKKDPTNAQSHIKR 662 +TRA+ N T +D SA KKDP N Q +++R Sbjct: 665 ITRANSRNDMLTIRDALEVSAEMYKKDPNNVQDYVQR 701
>Os03g0843800:Os03g0843800 | Length = 246 Score = 29.3 bits (64), Expect = 3.7 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%) Frame = +3 Query: 186 GGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPP---AYRLFIIGCGSA 356 GGG S G +R W EEG P+D QR A+ V P A + + GCG+ Sbjct: 32 GGGQESSDGWSRCW-----EEGVTPWDLGQRTPAVVELVHSGTLPAGDATTVLVPGCGAG 86 Query: 357 H 359 + Sbjct: 87 Y 87
>Os10g0569600:Os10g0569600 | Length = 81 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 Query: 314 HKAADEGAQRGVALVAVVGRTALLHVARIPVPRLP 210 H A+ +G + G A +GR L+ R PVPR+P Sbjct: 23 HTASVQGGRAGAA--DAIGRNGALNPPRYPVPRIP 55
>Os02g0787100:Os02g0787100 | Length = 432 Score = 28.9 bits (63), Expect = 4.9 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 17/56 (30%) Frame = +3 Query: 78 RPAHFLARAPCRP--------RAMSSWSPPLPP-RGAE--------EEGDTRSGGG 194 RPA + +AP P R +S W PP PP +G + TRSGGG Sbjct: 35 RPASAMGQAPSSPPGPGRSRSRGISRWPPPPPPLQGLRLDLGLLLGRKARTRSGGG 90
>AK104823:Os10g0580800 | Length = 293 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 39 AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 A+ P+ Q LR+ PRP + P PRA S+ S PL G E G GA Sbjct: 24 ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77
>AK104666:Os10g0580800 | Length = 293 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 39 AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 A+ P+ Q LR+ PRP + P PRA S+ S PL G E G GA Sbjct: 24 ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77
>AK104589:Os10g0580800 | Length = 293 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 39 AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 A+ P+ Q LR+ PRP + P PRA S+ S PL G E G GA Sbjct: 24 ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77
>AK104396:Os10g0580800 | Length = 293 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 39 AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 A+ P+ Q LR+ PRP + P PRA S+ S PL G E G GA Sbjct: 24 ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77
>AK065306:Os10g0580800 | Length = 293 Score = 28.9 bits (63), Expect = 4.9 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = +3 Query: 39 AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197 A+ P+ Q LR+ PRP + P PRA S+ S PL G E G GA Sbjct: 24 ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77
>AK061279:Os04g0401100 | Length = 216 Score = 28.9 bits (63), Expect = 4.9 Identities = 13/49 (26%), Positives = 22/49 (44%) Frame = -2 Query: 808 IHHSPIPRIKVQRLTRAHQNNFTCTQQDTSTSASAQKKDPTNAQSHIKR 662 + SPIP + H TCT++ +A+ + T SH++R Sbjct: 86 MRRSPIPSPSPTHASSYHSRTLTCTRRRRRAAAAPPRTAATATPSHLRR 134
>X56063:Os06g0726200 | Length = 199 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 79 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 125
>AY378172:Os06g0726200 | Length = 195 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 75 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 121
>AB071296:Os06g0702600 | Length = 1123 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/48 (25%), Positives = 21/48 (43%) Frame = +3 Query: 552 RAQNRSWHDNRWQWQEHIVQRKRMRRNLWFSSNLCGTLFMCDCAFVGS 695 R +N W + + W E +R R ++W + F+C F G+ Sbjct: 315 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA 362
>AK119958: | Length = 162 Score = 28.5 bits (62), Expect = 6.4 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 214 RRGTGMRATWRRAVRPTTATSATPRCAP 297 R GTG R+ WRR+ RP +P C P Sbjct: 115 RPGTGTRSPWRRSARP------SPPCRP 136
>Z29961:Os06g0726200 | Length = 214 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 94 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140
>AK105798:Os06g0726200 | Length = 214 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 94 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140
>AK104020:Os06g0726200 | Length = 214 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 94 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140
>AK103326:Os01g0111900 | Length = 212 Score = 28.5 bits (62), Expect = 6.4 Identities = 18/42 (42%), Positives = 22/42 (52%) Frame = +1 Query: 259 PTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRRA 384 P T++SAT R AP +A C P A A R TC R R+ Sbjct: 43 PPTSSSATTRSAPRAA--CPAPAARRARTPARRRPTCCRLRS 82
>AK103312:Os06g0702600 | Length = 991 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/48 (25%), Positives = 21/48 (43%) Frame = +3 Query: 552 RAQNRSWHDNRWQWQEHIVQRKRMRRNLWFSSNLCGTLFMCDCAFVGS 695 R +N W + + W E +R R ++W + F+C F G+ Sbjct: 353 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA 400
>AK101067:Os01g0877500 | Length = 716 Score = 28.5 bits (62), Expect = 6.4 Identities = 17/43 (39%), Positives = 20/43 (46%) Frame = +3 Query: 72 LPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGAV 200 LP P+ F A P + +W L EEGD GGGAV Sbjct: 50 LPLPSIFSPAAAAAPPHLLTWRVSLR---VGEEGDEEGGGGAV 89
>AK099339:Os06g0726200 | Length = 214 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 94 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140
>AK061042:Os06g0726200 | Length = 214 Score = 28.5 bits (62), Expect = 6.4 Identities = 19/49 (38%), Positives = 25/49 (51%) Frame = +1 Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381 AT RRA RP T+T TP P + + P ++ A+ R WRRR Sbjct: 94 ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140
>Os07g0597300:Os07g0597300 | Length = 218 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%) Frame = +3 Query: 39 AIFPSAQIHLRLP-RPAHFLARAPCRPRAMSSWSPPLPPRGAEEE 170 A P + H L RPA L RA PR ++ +PP PPR AE + Sbjct: 117 AAAPPRRRHASLSHRPASPLPRAAAPPRRFAT-APPPPPRTAEPQ 160
>AK106103:Os04g0126500 | Length = 100 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = +3 Query: 24 PHLWRAIFPSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGG 191 PH+ R +A +P PA AR RP A P LPPR E E + G Sbjct: 41 PHVARLRVSTAVAARPVPAPARHHAR---RPPAPLDLDPRLPPRERERERERGKRG 93
>AK073603:Os03g0596800 | Length = 165 Score = 28.1 bits (61), Expect = 8.3 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = +3 Query: 57 QIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTR 182 ++H +PRP AR R + + PP PP A G+ R Sbjct: 112 RLHPGVPRPIPAAARRRDRRLPLGALLPPPPPTSARRTGERR 153
>AK072007:Os11g0549700 | Length = 479 Score = 28.1 bits (61), Expect = 8.3 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -1 Query: 374 LQQVVMRGA--ASDYEEAVGRRHKAADEGAQRGVALVAVVGRTALLH 240 L +RGA A+D G R +AAD R V + A G+TA LH Sbjct: 38 LHWAAVRGAIAAADVLLENGARVEAADVNGYRAVHVAAQYGQTAFLH 84
>AK067785:Os12g0563400 | Length = 625 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/54 (33%), Positives = 24/54 (44%) Frame = +3 Query: 147 PPRGAEEEGDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRR 308 PPRG E +GD RSGG YG Y+ + + A Y+ + V R Sbjct: 7 PPRGQEGQGD-RSGGDEGGRYGVLLYYKYAEVPDAAALAAFYESHCRALALVGR 59
>AK067465:Os04g0126500 | Length = 100 Score = 28.1 bits (61), Expect = 8.3 Identities = 20/56 (35%), Positives = 24/56 (42%) Frame = +3 Query: 24 PHLWRAIFPSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGG 191 PH+ R +A +P PA AR RP A P LPPR E E + G Sbjct: 41 PHVARLRVSTAVAARPVPAPARHHAR---RPPAPLDLDPRLPPRERERERERGKRG 93 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,264,779 Number of extensions: 570712 Number of successful extensions: 2604 Number of sequences better than 10.0: 37 Number of HSP's gapped: 2596 Number of HSP's successfully gapped: 40 Length of query: 290 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 190 Effective length of database: 11,395,755 Effective search space: 2165193450 Effective search space used: 2165193450 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)