ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK099536:Os07g0656800 107 1e-23
2AK105822:Os01g0962500 75 6e-14
3AK073163:Os01g0962500 75 6e-14
4AK105385:Os08g0517600 61 9e-10
5AK073374:Os08g0517600 61 9e-10
6AK108864: 32 0.44
7AK110145:Os09g0535200 31 0.98
8Os02g0168400:Os02g0168400 31 1.3
9Os04g0388600:Os04g0388600 30 1.7
10Os01g0575500:Os01g0575500 30 2.2
11Os03g0843800:Os03g0843800 29 3.7
12Os10g0569600:Os10g0569600 29 4.9
13Os02g0787100:Os02g0787100 29 4.9
14AK104823:Os10g0580800 29 4.9
15AK104666:Os10g0580800 29 4.9
16AK104589:Os10g0580800 29 4.9
17AK104396:Os10g0580800 29 4.9
18AK065306:Os10g0580800 29 4.9
19AK061279:Os04g0401100 29 4.9
20X56063:Os06g0726200 28 6.4
21AY378172:Os06g0726200 28 6.4
22AB071296:Os06g0702600 28 6.4
23AK119958: 28 6.4
24Z29961:Os06g0726200 28 6.4
25AK105798:Os06g0726200 28 6.4
26AK104020:Os06g0726200 28 6.4
27AK103326:Os01g0111900 28 6.4
28AK103312:Os06g0702600 28 6.4
29AK101067:Os01g0877500 28 6.4
30AK099339:Os06g0726200 28 6.4
31AK061042:Os06g0726200 28 6.4
32Os07g0597300:Os07g0597300 28 8.3
33AK106103:Os04g0126500 28 8.3
34AK073603:Os03g0596800 28 8.3
35AK072007:Os11g0549700 28 8.3
36AK067785:Os12g0563400 28 8.3
37AK067465:Os04g0126500 28 8.3

>AK099536:Os07g0656800 |
          Length = 185
 Score =  107 bits (267), Expect = 1e-23
 Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 15/103 (14%)
 Frame = +3

Query: 93  LARAPCRPRAMSSWSPPLPPRGAEEEGDTRS---------------GGGAVFSYGEARYW 227
           LAR+P  P A ++  PP  P   EEEG  RS               GGG   SYG+A YW
Sbjct: 21  LARSP--PPAAAAAMPPSSPE-PEEEGMGRSDAGVGGGGGGEGGGGGGGRALSYGKAEYW 77

Query: 228 DARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCGSA 356
           DARY+EEGGAPYD YQRYAALRPFVRRF PP  R+ +IGCGSA
Sbjct: 78  DARYVEEGGAPYDWYQRYAALRPFVRRFAPPESRVLMIGCGSA 120



to top

>AK105822:Os01g0962500 |
          Length = 551

 Score = 75.1 bits (183), Expect = 6e-14
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = +3

Query: 360 YNLLEETSLVRELAHRLLGDFGGNFGRNFEGCSGAKLPPSLVALCKAAER*SVRLFFLPR 539
           Y+ LEET  V E AHRL+G FG N+G    G  GA+LP  L  L KAA+R  + L FLPR
Sbjct: 87  YSFLEETKQVAESAHRLIGAFGRNYG----GFGGAQLPKWLFYLRKAAQRRGIWLQFLPR 142

Query: 540 GMTRRAQNRSWHDNR 584
           GM RR QNRS H++R
Sbjct: 143 GMARREQNRSRHNHR 157



to top

>AK073163:Os01g0962500 |
          Length = 551

 Score = 75.1 bits (183), Expect = 6e-14
 Identities = 42/75 (56%), Positives = 50/75 (66%)
 Frame = +3

Query: 360 YNLLEETSLVRELAHRLLGDFGGNFGRNFEGCSGAKLPPSLVALCKAAER*SVRLFFLPR 539
           Y+ LEET  V E AHRL+G FG N+G    G  GA+LP  L  L KAA+R  + L FLPR
Sbjct: 87  YSFLEETKQVAESAHRLIGAFGRNYG----GFGGAQLPKWLFYLRKAAQRRGIWLQFLPR 142

Query: 540 GMTRRAQNRSWHDNR 584
           GM RR QNRS H++R
Sbjct: 143 GMARREQNRSRHNHR 157



to top

>AK105385:Os08g0517600 |
          Length = 197

 Score = 61.2 bits (147), Expect = 9e-10
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +3

Query: 171 GDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCG 350
           G    GG A  +YGEA YWD RY +E G P+D YQ+Y AL P +  +V   +RL + GCG
Sbjct: 4   GGGGGGGTAAQAYGEAWYWDERYRKEAG-PFDWYQKYPALAPLLAVYVRRHHRLLLAGCG 62

Query: 351 SA 356
           ++
Sbjct: 63  NS 64



to top

>AK073374:Os08g0517600 |
          Length = 241

 Score = 61.2 bits (147), Expect = 9e-10
 Identities = 29/62 (46%), Positives = 39/62 (62%)
 Frame = +3

Query: 171 GDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCG 350
           G    GG A  +YGEA YWD RY +E G P+D YQ+Y AL P +  +V   +RL + GCG
Sbjct: 4   GGGGGGGTAAQAYGEAWYWDERYRKEAG-PFDWYQKYPALAPLLAVYVRRHHRLLLAGCG 62

Query: 351 SA 356
           ++
Sbjct: 63  NS 64



to top

>AK108864: |
          Length = 72

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 686 CWVLFLCTCTCRSILLCTCKIILMCPC 766
           C V+ +C C C  + +C C  + +C C
Sbjct: 19  CCVVCVCVCVCVCVCVCVCVCVCVCAC 45



 Score = 31.2 bits (69), Expect = 0.98
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +2

Query: 677 LCICWVLFLCTCTCRSILLCTCKIILMC 760
           +C+C  + +C C C  + +C C  +  C
Sbjct: 22  VCVCVCVCVCVCVCVCVCVCVCACVRAC 49



 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/40 (30%), Positives = 17/40 (42%), Gaps = 5/40 (12%)
 Frame = +2

Query: 656 WN-----SLYVRLCICWVLFLCTCTCRSILLCTCKIILMC 760
           WN     SL  R C    + +C C C  + +C C  +  C
Sbjct: 6   WNGGFCISLAQRACCVVCVCVCVCVCVCVCVCVCVCVCAC 45



to top

>AK110145:Os09g0535200 |
          Length = 861

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +3

Query: 48  PSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGA 161
           P+A + LRLP P     RAP  P A ++   P PP  A
Sbjct: 688 PTAPLSLRLPAPHLRARRAPTSPPAAATPRAPTPPAAA 725



to top

>Os02g0168400:Os02g0168400 |
          Length = 962

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 19/38 (50%), Positives = 21/38 (55%)
 Frame = +3

Query: 84  AHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           +H LA AP R R+    SPP P R A EE D   GG A
Sbjct: 30  SHALAAAPRRARSGRHASPP-PQRVAPEEEDDGGGGAA 66



to top

>Os04g0388600:Os04g0388600 |
          Length = 148

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +3

Query: 132 WSPPLPP-RGAEEEGDTRSGGGAVFSYGEARYWDARYMEEG-----GAPYDCYQRYAA 287
           WSPP PP   A  E + +S G    S+ E R W+A  M         A   C +R AA
Sbjct: 70  WSPPAPPAAAAAAEEEDQSVGLQSSSFMEERIWNAAAMVSSRWRCPSAAISCRRRAAA 127



to top

>Os01g0575500:Os01g0575500 |
          Length = 1248

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 769 LTRAHQNNFTCTQQDT-STSASAQKKDPTNAQSHIKR 662
           +TRA+  N   T +D    SA   KKDP N Q +++R
Sbjct: 665 ITRANSRNDMLTIRDALEVSAEMYKKDPNNVQDYVQR 701



to top

>Os03g0843800:Os03g0843800 |
          Length = 246

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
 Frame = +3

Query: 186 GGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPP---AYRLFIIGCGSA 356
           GGG   S G +R W     EEG  P+D  QR  A+   V     P   A  + + GCG+ 
Sbjct: 32  GGGQESSDGWSRCW-----EEGVTPWDLGQRTPAVVELVHSGTLPAGDATTVLVPGCGAG 86

Query: 357 H 359
           +
Sbjct: 87  Y 87



to top

>Os10g0569600:Os10g0569600 |
          Length = 81

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -1

Query: 314 HKAADEGAQRGVALVAVVGRTALLHVARIPVPRLP 210
           H A+ +G + G A    +GR   L+  R PVPR+P
Sbjct: 23  HTASVQGGRAGAA--DAIGRNGALNPPRYPVPRIP 55



to top

>Os02g0787100:Os02g0787100 |
          Length = 432

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 17/56 (30%)
 Frame = +3

Query: 78  RPAHFLARAPCRP--------RAMSSWSPPLPP-RGAE--------EEGDTRSGGG 194
           RPA  + +AP  P        R +S W PP PP +G           +  TRSGGG
Sbjct: 35  RPASAMGQAPSSPPGPGRSRSRGISRWPPPPPPLQGLRLDLGLLLGRKARTRSGGG 90



to top

>AK104823:Os10g0580800 |
          Length = 293

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 39  AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           A+ P+ Q  LR+   PRP    +  P  PRA S+ S PL   G   E     G GA
Sbjct: 24  ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77



to top

>AK104666:Os10g0580800 |
          Length = 293

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 39  AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           A+ P+ Q  LR+   PRP    +  P  PRA S+ S PL   G   E     G GA
Sbjct: 24  ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77



to top

>AK104589:Os10g0580800 |
          Length = 293

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 39  AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           A+ P+ Q  LR+   PRP    +  P  PRA S+ S PL   G   E     G GA
Sbjct: 24  ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77



to top

>AK104396:Os10g0580800 |
          Length = 293

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 39  AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           A+ P+ Q  LR+   PRP    +  P  PRA S+ S PL   G   E     G GA
Sbjct: 24  ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77



to top

>AK065306:Os10g0580800 |
          Length = 293

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 39  AIFPSAQIHLRL---PRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGA 197
           A+ P+ Q  LR+   PRP    +  P  PRA S+ S PL   G   E     G GA
Sbjct: 24  ALRPTQQRRLRVVAPPRPLRLTSLNP--PRAASAPSTPLWEAGVRAESSDSPGAGA 77



to top

>AK061279:Os04g0401100 |
          Length = 216

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 13/49 (26%), Positives = 22/49 (44%)
 Frame = -2

Query: 808 IHHSPIPRIKVQRLTRAHQNNFTCTQQDTSTSASAQKKDPTNAQSHIKR 662
           +  SPIP       +  H    TCT++    +A+  +   T   SH++R
Sbjct: 86  MRRSPIPSPSPTHASSYHSRTLTCTRRRRRAAAAPPRTAATATPSHLRR 134



to top

>X56063:Os06g0726200 |
          Length = 199

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 79  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 125



to top

>AY378172:Os06g0726200 |
          Length = 195

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 75  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 121



to top

>AB071296:Os06g0702600 |
          Length = 1123

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3

Query: 552 RAQNRSWHDNRWQWQEHIVQRKRMRRNLWFSSNLCGTLFMCDCAFVGS 695
           R +N  W + +  W E     +R R ++W    +    F+C   F G+
Sbjct: 315 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA 362



to top

>AK119958: |
          Length = 162

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +1

Query: 214 RRGTGMRATWRRAVRPTTATSATPRCAP 297
           R GTG R+ WRR+ RP      +P C P
Sbjct: 115 RPGTGTRSPWRRSARP------SPPCRP 136



to top

>Z29961:Os06g0726200 |
          Length = 214

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 94  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140



to top

>AK105798:Os06g0726200 |
          Length = 214

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 94  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140



to top

>AK104020:Os06g0726200 |
          Length = 214

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 94  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140



to top

>AK103326:Os01g0111900 |
          Length = 212

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +1

Query: 259 PTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRRA 384
           P T++SAT R AP +A  C  P A      A R  TC R R+
Sbjct: 43  PPTSSSATTRSAPRAA--CPAPAARRARTPARRRPTCCRLRS 82



to top

>AK103312:Os06g0702600 |
          Length = 991

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = +3

Query: 552 RAQNRSWHDNRWQWQEHIVQRKRMRRNLWFSSNLCGTLFMCDCAFVGS 695
           R +N  W + +  W E     +R R ++W    +    F+C   F G+
Sbjct: 353 RWKNSQWRNLQVGWDESAAGERRNRVSIWEIEPVAAPFFICPPPFFGA 400



to top

>AK101067:Os01g0877500 |
          Length = 716

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = +3

Query: 72  LPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGGGAV 200
           LP P+ F   A   P  + +W   L      EEGD   GGGAV
Sbjct: 50  LPLPSIFSPAAAAAPPHLLTWRVSLR---VGEEGDEEGGGGAV 89



to top

>AK099339:Os06g0726200 |
          Length = 214

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 94  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140



to top

>AK061042:Os06g0726200 |
          Length = 214

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/49 (38%), Positives = 25/49 (51%)
 Frame = +1

Query: 235 ATWRRAVRPTTATSATPRCAPSSAALCLRPTASS*SDAAPRITTCWRRR 381
           AT RRA RP T+T  TP   P + +    P  ++   A+ R    WRRR
Sbjct: 94  ATTRRA-RPRTSTPTTPSSPPPTPSRA-SPQPATPPPASARSPRSWRRR 140



to top

>Os07g0597300:Os07g0597300 |
          Length = 218

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = +3

Query: 39  AIFPSAQIHLRLP-RPAHFLARAPCRPRAMSSWSPPLPPRGAEEE 170
           A  P  + H  L  RPA  L RA   PR  ++ +PP PPR AE +
Sbjct: 117 AAAPPRRRHASLSHRPASPLPRAAAPPRRFAT-APPPPPRTAEPQ 160



to top

>AK106103:Os04g0126500 |
          Length = 100

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +3

Query: 24  PHLWRAIFPSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGG 191
           PH+ R    +A     +P PA   AR   RP A     P LPPR  E E +    G
Sbjct: 41  PHVARLRVSTAVAARPVPAPARHHAR---RPPAPLDLDPRLPPRERERERERGKRG 93



to top

>AK073603:Os03g0596800 |
          Length = 165

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 57  QIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTR 182
           ++H  +PRP    AR   R   + +  PP PP  A   G+ R
Sbjct: 112 RLHPGVPRPIPAAARRRDRRLPLGALLPPPPPTSARRTGERR 153



to top

>AK072007:Os11g0549700 |
          Length = 479

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -1

Query: 374 LQQVVMRGA--ASDYEEAVGRRHKAADEGAQRGVALVAVVGRTALLH 240
           L    +RGA  A+D     G R +AAD    R V + A  G+TA LH
Sbjct: 38  LHWAAVRGAIAAADVLLENGARVEAADVNGYRAVHVAAQYGQTAFLH 84



to top

>AK067785:Os12g0563400 |
          Length = 625

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = +3

Query: 147 PPRGAEEEGDTRSGGGAVFSYGEARYWDARYMEEGGAPYDCYQRYAALRPFVRR 308
           PPRG E +GD RSGG     YG   Y+    + +  A    Y+ +      V R
Sbjct: 7   PPRGQEGQGD-RSGGDEGGRYGVLLYYKYAEVPDAAALAAFYESHCRALALVGR 59



to top

>AK067465:Os04g0126500 |
          Length = 100

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 20/56 (35%), Positives = 24/56 (42%)
 Frame = +3

Query: 24  PHLWRAIFPSAQIHLRLPRPAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGG 191
           PH+ R    +A     +P PA   AR   RP A     P LPPR  E E +    G
Sbjct: 41  PHVARLRVSTAVAARPVPAPARHHAR---RPPAPLDLDPRLPPRERERERERGKRG 93


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 23,264,779
Number of extensions: 570712
Number of successful extensions: 2604
Number of sequences better than 10.0: 37
Number of HSP's gapped: 2596
Number of HSP's successfully gapped: 40
Length of query: 290
Length of database: 15,399,855
Length adjustment: 100
Effective length of query: 190
Effective length of database: 11,395,755
Effective search space: 2165193450
Effective search space used: 2165193450
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top