ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92h18
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q91YR5:K0859_MOUSE Uncharacterized protein KIAA0859 - Mus muscul... 40 0.016
2Q8N6R0:K0859_HUMAN Uncharacterized protein KIAA0859 - Homo sapie... 37 0.079
3Q96N68:CR015_HUMAN Uncharacterized protein C18orf15 - Homo sapie... 33 1.5
4O87005:CHPE_PSEAE Chemotactic transduction protein chpE - Pseudo... 31 7.4
5Q9STN3:SPT51_ARATH Putative transcription elongation factor SPT5... 30 9.7
6Q02722:Q300_MOUSE Protein Q300 - Mus musculus (Mouse) 30 9.7

>Q91YR5:K0859_MOUSE Uncharacterized protein KIAA0859 - Mus musculus (Mouse)|
          Length = 698
 Score = 39.7 bits (91), Expect = 0.016
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = +3

Query: 207 YGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCGSA 356
           +G A YW+  + + G   ++ Y  Y  L   + +++ P  ++ +IGCG++
Sbjct: 11  FGSADYWEKFFQQRGKTAFEWYGTYLELCEVLHKYIKPKEKVLVIGCGNS 60



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>Q8N6R0:K0859_HUMAN Uncharacterized protein KIAA0859 - Homo sapiens (Human)|
          Length = 699

 Score = 37.4 bits (85), Expect = 0.079
 Identities = 12/50 (24%), Positives = 27/50 (54%)
 Frame = +3

Query: 207 YGEARYWDARYMEEGGAPYDCYQRYAALRPFVRRFVPPAYRLFIIGCGSA 356
           +G   YW+  + + G   ++ Y  Y  L   + +++ P  ++ +IGCG++
Sbjct: 11  FGSVDYWEKFFQQRGKKAFEWYGTYLELCGVLHKYIKPREKVLVIGCGNS 60



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>Q96N68:CR015_HUMAN Uncharacterized protein C18orf15 - Homo sapiens (Human)|
          Length = 181

 Score = 33.1 bits (74), Expect = 1.5
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +2

Query: 677 LCICWVLFLCTCTCRSILLCTCKIILMCPC 766
           +C+C  + +C   C  + +C C ++ MC C
Sbjct: 127 VCMCACMCVCVHVCACVYVCMCVLVCMCAC 156



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>O87005:CHPE_PSEAE Chemotactic transduction protein chpE - Pseudomonas aeruginosa|
          Length = 203

 Score = 30.8 bits (68), Expect = 7.4
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
 Frame = +3

Query: 129 SWSPPLPPRGAEEEGDTRSGGGAVFSYGEAR---YWDA 233
           +WSPPL    A E+G    G GA  S    +   YW A
Sbjct: 92  AWSPPLAAEDAGEQGRNAFGAGAAISLSNPKNVVYWGA 129



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>Q9STN3:SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1 -|
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 1054

 Score = 30.4 bits (67), Expect = 9.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +3

Query: 81  PAHFLARAPCRPRAMSSWSPPLPPRGAEEEGDTRSGG 191
           P H   R P R RA + ++P  PPR   E+G+  S G
Sbjct: 814 PIHDGMRTPMRDRAWNPYTPMSPPRDNWEDGNPGSWG 850



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>Q02722:Q300_MOUSE Protein Q300 - Mus musculus (Mouse)|
          Length = 77

 Score = 30.4 bits (67), Expect = 9.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +2

Query: 659 NSLYVRLCICWVLFLCTCTCRSILLCTCK 745
           N  YV +C+C    +C C C   L C CK
Sbjct: 23  NLFYVCVCVC----VCVCVCVCTLTCMCK 47


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 130,417,096
Number of extensions: 2783445
Number of successful extensions: 8429
Number of sequences better than 10.0: 6
Number of HSP's gapped: 8413
Number of HSP's successfully gapped: 6
Length of query: 290
Length of database: 100,686,439
Length adjustment: 112
Effective length of query: 178
Effective length of database: 69,965,399
Effective search space: 12453841022
Effective search space used: 12453841022
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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