ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89g10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|CT833048.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA042F10, full insert sequence Length = 834 Score = 545 bits (275), Expect = e-151 Identities = 487/560 (86%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 69 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 128 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 129 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 188 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 189 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 248 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 308 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 309 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 368 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 369 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 428 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 429 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 488 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 489 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 548 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 549 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 608 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 609 atctacgtgagcgacaaggg 628
>dbj|AK243227.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100044F18, full insert sequence Length = 2769 Score = 545 bits (275), Expect = e-151 Identities = 487/560 (86%) Strand = Plus / Minus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 1857 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 1798 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 1797 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 1738 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 1737 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 1678 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1677 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 1618 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1617 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 1558 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 1557 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 1498 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 1497 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 1438 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 1437 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 1378 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 1377 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 1318 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 1317 atctacgtgagcgacaaggg 1298
>ref|NM_001070055.1| Oryza sativa (japonica cultivar-group) Os09g0485900 (Os09g0485900) mRNA, complete cds Length = 884 Score = 545 bits (275), Expect = e-151 Identities = 487/560 (86%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 69 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 128 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 129 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 188 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 189 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 248 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 249 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 308 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 309 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 368 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 369 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 428 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 429 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 488 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 489 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 548 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 549 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 608 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 609 atctacgtgagcgacaaggg 628
>gb|AY323481.1| Oryza sativa (japonica cultivar-group) ribosomal L9-like protein mRNA, complete cds Length = 797 Score = 545 bits (275), Expect = e-151 Identities = 487/560 (86%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 54 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 113 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 114 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 173 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 174 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 233 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 234 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 293 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 294 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 353 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 354 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 413 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 414 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 473 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 474 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 533 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 534 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 593 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 594 atctacgtgagcgacaaggg 613
>dbj|AK064936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000P02, full insert sequence Length = 886 Score = 537 bits (271), Expect = e-149 Identities = 486/560 (86%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||| | ||||||||||| |||||||||| ||||||| Sbjct: 71 ccggcgaagatgaagaccatcctggcgcccgagacgatggagatcccggagggggtgacg 130 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 131 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 190 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 191 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 250 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 251 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 310 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 311 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 370 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 371 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 430 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 431 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 490 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 491 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 550 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 551 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 610 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 611 atctacgtgagcgacaaggg 630
>dbj|D83527.1|RICGA3 Rice (YK426) mRNA, complete cds Length = 816 Score = 537 bits (271), Expect = e-149 Identities = 486/560 (86%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| | ||||| Sbjct: 67 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggaggggttgacg 126 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 127 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 186 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 187 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 246 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 247 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 306 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 307 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 366 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctc 489 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| | Sbjct: 367 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcttg 426 Query: 490 ggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgag 549 || | ||| ||||| ||||||||||| || || ||||| ||| ||||||| ||| Sbjct: 427 ggcgagaagaaggtgaggaaggttgacatgctcgagggggtgaccatcttgcggtcggag 486 Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||||||| ||||||| || ||||| ||||| ||||| ||||| ||||| || Sbjct: 487 aaggtgaaggacgagctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagca 546 Query: 610 gccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggc 669 ||||| |||||||||||||||||||||||||||||||| |||||||||||| |||| || Sbjct: 547 gccctcatcaaccagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggt 606 Query: 670 atctatgtcagcgacaaggg 689 ||||| || ||||||||||| Sbjct: 607 atctacgtgagcgacaaggg 626
>ref|NM_001052142.1| Oryza sativa (japonica cultivar-group) Os02g0103700 (Os02g0103700) mRNA, complete cds Length = 913 Score = 509 bits (257), Expect = e-141 Identities = 488/566 (86%), Gaps = 6/566 (1%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| | || Sbjct: 85 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtgcacgt 144 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | |||||| || | ||||| ||||||||| || | ||||| |||||||||||||| Sbjct: 145 ggcggcgaaggtggtgacggtggagggtccccgtgggaagctgacgcgcaacttcaagca 204 Query: 258 cctcaacctcgacttccagctgcagga--tggcggccg----gaagctcaaggttgacgc 311 ||| ||||| ||||||||||||| ||| ||| || | |||||| |||| ||||| Sbjct: 205 cctgaacctggacttccagctgctggaggtggagggggtgaggaagctgcaggtggacgc 264 Query: 312 ctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 265 gtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 324 Query: 372 cctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccactt 431 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 325 cctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctatgcccattt 384 Query: 432 ccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcgg 491 |||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 385 ccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcctcgg 444 Query: 492 agnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaa 551 | ||| |||||||| ||||||||||| ||||||||||| |||| || ||||| Sbjct: 445 cgagaagaaggtgaggaaagtggacatgcttgagggtgtgacaattttgcgttctgagaa 504 Query: 552 ggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgc 611 ||||||||| ||| | ||||| ||||||||||| || |||||||||||||| ||||| || Sbjct: 505 ggtcaaggatgagctggtccttgatggcaatgatatcgagcttgtctcccgttctgcggc 564 Query: 612 cctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcat 671 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 565 actgatcaaccagaaatgccacgtcaagaacaaggatatcaggaagttcctggatggcat 624 Query: 672 ctatgtcagcgacaagggcgccatca 697 ||||||||| ||||||||| |||||| Sbjct: 625 ctatgtcagtgacaagggcaccatca 650
>dbj|AK102186.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033086N17, full insert sequence Length = 914 Score = 509 bits (257), Expect = e-141 Identities = 488/566 (86%), Gaps = 6/566 (1%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| | || Sbjct: 86 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtgcacgt 145 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | |||||| || | ||||| ||||||||| || | ||||| |||||||||||||| Sbjct: 146 ggcggcgaaggtggtgacggtggagggtccccgtgggaagctgacgcgcaacttcaagca 205 Query: 258 cctcaacctcgacttccagctgcagga--tggcggccg----gaagctcaaggttgacgc 311 ||| ||||| ||||||||||||| ||| ||| || | |||||| |||| ||||| Sbjct: 206 cctgaacctggacttccagctgctggaggtggagggggtgaggaagctgcaggtggacgc 265 Query: 312 ctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 266 gtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 325 Query: 372 cctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccactt 431 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 326 cctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctatgcccattt 385 Query: 432 ccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcgg 491 |||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 386 ccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcctcgg 445 Query: 492 agnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaa 551 | ||| |||||||| ||||||||||| ||||||||||| |||| || ||||| Sbjct: 446 cgagaagaaggtgaggaaagtggacatgcttgagggtgtgacaattttgcgttctgagaa 505 Query: 552 ggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgc 611 ||||||||| ||| | ||||| ||||||||||| || |||||||||||||| ||||| || Sbjct: 506 ggtcaaggatgagctggtccttgatggcaatgatatcgagcttgtctcccgttctgcggc 565 Query: 612 cctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcat 671 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 566 actgatcaaccagaaatgccacgtcaagaacaaggatatcaggaagttcctggatggcat 625 Query: 672 ctatgtcagcgacaagggcgccatca 697 ||||||||| ||||||||| |||||| Sbjct: 626 ctatgtcagtgacaagggcaccatca 651
>dbj|AK062502.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-104-A12, full insert sequence Length = 823 Score = 509 bits (257), Expect = e-141 Identities = 488/566 (86%), Gaps = 6/566 (1%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| | || Sbjct: 81 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtgcacgt 140 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | |||||| || | ||||| ||||||||| || | ||||| |||||||||||||| Sbjct: 141 ggcggcgaaggtggtgacggtggagggtccccgtgggaagctgacgcgcaacttcaagca 200 Query: 258 cctcaacctcgacttccagctgcagga--tggcggccg----gaagctcaaggttgacgc 311 ||| ||||| ||||||||||||| ||| ||| || | |||||| |||| ||||| Sbjct: 201 cctgaacctggacttccagctgctggaggtggagggggtgaggaagctgcaggtggacgc 260 Query: 312 ctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 261 gtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 320 Query: 372 cctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccactt 431 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 321 cctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctatgcccattt 380 Query: 432 ccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcgg 491 |||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 381 ccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcctcgg 440 Query: 492 agnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaa 551 | ||| |||||||| ||||||||||| ||||||||||| |||| || ||||| Sbjct: 441 cgagaagaaggtgaggaaagtggacatgcttgagggtgtgacaattttgcgttctgagaa 500 Query: 552 ggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgc 611 ||||||||| ||| | ||||| ||||||||||| || |||||||||||||| ||||| || Sbjct: 501 ggtcaaggatgagctggtccttgatggcaatgatatcgagcttgtctcccgttctgcggc 560 Query: 612 cctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcat 671 ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||| Sbjct: 561 actgatcaaccagaaatgccacgtcaagaacaaggatatcaggaagttcctggatggcat 620 Query: 672 ctatgtcagcgacaagggcgccatca 697 ||||||||| ||||||||| |||||| Sbjct: 621 ctatgtcagtgacaagggcaccatca 646
>gb|DQ244269.1| Zea mays clone 4037 mRNA sequence Length = 821 Score = 490 bits (247), Expect = e-135 Identities = 482/560 (86%), Gaps = 2/560 (0%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||||| ||||||||||||||||| |||||||||| || ||||| | ||| Sbjct: 68 gatgaagacgatcctggcgtcggagacgatggacatcccggagggcgtcacggtcacggt 127 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | || ||| || || ||||| ||| ||||| |||| || ||||||||||||||||| Sbjct: 128 ggccgccaagctggtcacggtggagggcccccgcggcaagctcacccgcaacttcaagca 187 Query: 258 cctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgacgcctggtt 317 ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct: 188 cctcaacctcgacttccagctgcaggaggccggccgcaagctcaaggtggacgcctggtt 247 Query: 318 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 248 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 307 Query: 378 caccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccat 437 || || ||||||||||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 308 caagggggtcaccaagggctaccgctacaagatgaggttcgtctacgcccacttccccat 367 Query: 438 caacgcatccatcacc-gcagccaaccgcggcatcgagatcaggaacttcctcggagnnn 496 |||||| ||||||||| ||| |||| || |||||||||||| ||||||||||| | Sbjct: 368 caacgcctccatcaccaacag-caacaccgccatcgagatcagaaacttcctcggcgaga 426 Query: 497 nnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtca 556 ||| ||||| || ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 427 agaaggtcaggaaggtggacatgcttgatggcgtgaccatcctccggtccgagaaggtca 486 Query: 557 aggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctga 616 |||| ||| || |||| || || || ||| | ||||| || || ||||| || ||||| | Sbjct: 487 aggatgagctcatccttgacggaaacgacgtcgagctcgtatctcgctccgccgccctca 546 Query: 617 tcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatg 676 |||||||||||||||| |||||||| ||||| ||| | ||||| ||||||| ||||||| Sbjct: 547 tcaaccagaaatgccatgtgaagaagaaggatatccgaaagtttttggacggtatctatg 606 Query: 677 tcagcgacaagggcgccatc 696 | ||||||||||||| |||| Sbjct: 607 tgagcgacaagggcgtcatc 626
>gb|BT016560.1| Zea mays clone Contig393 mRNA sequence Length = 747 Score = 474 bits (239), Expect = e-130 Identities = 480/560 (85%), Gaps = 2/560 (0%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||||| ||||||||||||||||| |||||||||| || ||||| | || Sbjct: 47 gatgaagacgatcctggcgtcggagacgatggacatcccggagggcgtcacggtcaccgt 106 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | || ||| || || ||||| ||| ||||| |||| || ||||||||||||||||| Sbjct: 107 ggccgccaagctggtcacggtggagggcccccgcggcaagctcacccgcaacttcaagca 166 Query: 258 cctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgacgcctggtt 317 ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct: 167 cctcaacctcgacttccagctgcaggaggccggccgcaagctcaaggtggacgcctggtt 226 Query: 318 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 377 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 227 cggcacccgccgcactatggccgccatccgcaccgccatctcccacgtccagaacctcat 286 Query: 378 caccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccat 437 || || ||||||||||||| ||||||||||||| | ||||||||||||||||||||||| Sbjct: 287 caagggggtcaccaagggctaccgctacaagatgaggttcgtctacgcccacttccccat 346 Query: 438 caacgcatccatcacc-gcagccaaccgcggcatcgagatcaggaacttcctcggagnnn 496 |||||| ||||||||| ||| |||| || ||||||||||||||||||||||| | Sbjct: 347 caacgcctccatcaccaacag-caacaccgcaatcgagatcaggaacttcctcggcgaga 405 Query: 497 nnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtca 556 ||| ||||| || ||||||||||| || ||||| ||||| |||||||||||||||| Sbjct: 406 agaaggtcaggaaggtggacatgcttgatggcgtgaccatcctccggtccgagaaggtca 465 Query: 557 aggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctga 616 |||| ||| || |||| || || || ||| | ||||| || || ||||| || ||||| | Sbjct: 466 aggatgagctcatccttgacggaaacgacgtcgagctcgtatctcgctccgccgccctca 525 Query: 617 tcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatg 676 |||||||||||||||| |||||||| ||||| ||| | ||||| ||||||| ||||||| Sbjct: 526 tcaaccagaaatgccatgtgaagaagaaggatatccgaaagtttttggacggtatctatg 585 Query: 677 tcagcgacaagggcgccatc 696 | ||||||||||||| |||| Sbjct: 586 tgagcgacaagggcgtcatc 605
>gb|AY104547.1| Zea mays PCO113533 mRNA sequence Length = 927 Score = 474 bits (239), Expect = e-130 Identities = 472/552 (85%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||||| ||||||||||||||||| |||||||||| || | ||| | ||| Sbjct: 128 gatgaagacgatcctggcgtcggagacgatggacatcccggagggcgtcatggtcacggt 187 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | || ||| || || ||||| ||| ||||| |||| || ||||||||||||||||| Sbjct: 188 ggccgccaagctggtcacggtggagggcccccgcggcaagctcacccgcaacttcaagca 247 Query: 258 cctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgacgcctggtt 317 ||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||| Sbjct: 248 cctcaacctcgacttccagctgcaggaggccggccgcaagctcaaggtggacgcctggtt 307 Query: 318 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 308 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 367 Query: 378 caccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccat 437 || || ||||||||||||| ||||||||||||| | |||||||||||||| |||||||| Sbjct: 368 caagggggtcaccaagggctaccgctacaagatgaggttcgtctacgcccatttccccat 427 Query: 438 caacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcggagnnnn 497 |||||| ||||||||| ||||| || ||||||||| |||||||||||||| | Sbjct: 428 caacgcgtccatcaccaactccaacaccgccatcgagataaggaacttcctcggcgagaa 487 Query: 498 nnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaa 557 ||| || || || |||||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 488 gaaggtcagaaaggtggacatgcttgacggcgtgaccatcctccgctccgagaaggtcaa 547 Query: 558 ggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgat 617 ||||||| | | || |||||||| ||| | ||| | ||||| ||||| || ||||| || Sbjct: 548 ggacgagcttattctcgatggcaacgacgtcgagttagtctctcgctccgccgccctcat 607 Query: 618 caaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||||||| || ||||| ||||| ||||||||||| |||| || |||||||| Sbjct: 608 caaccagaaatgccatgtcaagaagaaggatatcaggaagtttttggatggtatctatgt 667 Query: 678 cagcgacaaggg 689 ||||||||||| Sbjct: 668 gagcgacaaggg 679
>gb|DQ245423.1| Zea mays clone 15375 mRNA sequence Length = 784 Score = 458 bits (231), Expect = e-125 Identities = 470/552 (85%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||||| ||||||||||||||||| |||||||||| || ||||||| ||| Sbjct: 63 gatgaagacgatcctggcgtcggagacgatggacatcccggagggcgtcacggtgacggt 122 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | || ||| || | | ||| ||| ||||| || | || ||||| ||||||||||| Sbjct: 123 ggcggccaagctggtgacagtggagggcccccgcgggaagctcacccggaacttcaagca 182 Query: 258 cctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgacgcctggtt 317 ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||| ||||| Sbjct: 183 cctcaacctcgacttccagctgcaggagggcggccgcaagctcaaggtggacgcatggtt 242 Query: 318 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 377 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 cggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaacctcat 302 Query: 378 caccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccat 437 || || ||||||||||||| ||||||||||||| | |||||||||||||| |||||||| Sbjct: 303 caagggggtcaccaagggctaccgctacaagatgaggttcgtctacgcccatttccccat 362 Query: 438 caacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcggagnnnn 497 |||||| ||||||||| ||||| || ||||||||| |||||||||||||| | Sbjct: 363 caacgcgtccatcaccaactccaacaccgccatcgagataaggaacttcctcggcgagaa 422 Query: 498 nnnggtaaggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaa 557 ||| || || || |||||||||||||| ||||| ||||| || |||||||||||||| Sbjct: 423 gaaggtcagaaaggtggacatgcttgacggcgtgaccatcctccgctccgagaaggtcaa 482 Query: 558 ggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgat 617 ||||||| | | || |||||||| ||| | ||| | ||||| ||||| || ||||| || Sbjct: 483 ggacgagcttattctcgatggcaacgacgtcgagttagtctctcgctccgccgccctcat 542 Query: 618 caaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||||||| || ||||| ||||| ||||||||||| |||| || |||||||| Sbjct: 543 caaccagaaatgccatgtcaagaagaaggatatcaggaagtttttggatggtatctatgt 602 Query: 678 cagcgacaaggg 689 ||||||||||| Sbjct: 603 gagcgacaaggg 614
>gb|BT016425.1| Zea mays clone Contig258 mRNA sequence Length = 1002 Score = 442 bits (223), Expect = e-120 Identities = 396/456 (86%) Strand = Plus / Plus Query: 241 acccgcaacttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctc 300 |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| Sbjct: 159 acccgcaacttcaagcacctcaacctcgacttccagctgcaggacggcggtcgcaagctc 218 Query: 301 aaggttgacgcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcc 360 ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 219 aaggtcgacgcctggtttggcacccgccgaaccatggccgccatccgcaccgccatctcc 278 Query: 361 cacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtc 420 |||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||| Sbjct: 279 cacgtccagaacctcatcgcaggcgtcaccaagggtttccgctacaagatgcggttcgtc 338 Query: 421 tacgcccacttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcagg 480 ||||| ||||| ||||||||||| ||||||||| |||||| || ||| |||||||| Sbjct: 339 tacgctcactttcccatcaacgcctccatcaccaacgccaactccgccattgagatcaga 398 Query: 481 aacttcctcggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctg 540 ||||||||||| | ||| ||||| ||||| |||||||| |||||||| ||| || Sbjct: 399 aacttcctcggggagaagaaggtcaggaaggttgatatgcttgaaggtgtgaccatcttg 458 Query: 541 cggtccgagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcc 600 || || |||||||||||||| ||| | || || || |||||||| ||||||||||||| Sbjct: 459 cgttcagagaaggtcaaggatgagcttgttcttgaaggcaatgatgttgagcttgtctct 518 Query: 601 cgctctgctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttc 660 ||||| ||||| || || |||||||||||||| || ||||| ||||| ||| |||||||| Sbjct: 519 cgctccgctgctctcataaaccagaaatgccatgtcaagaagaaggatatccggaagttc 578 Query: 661 ctggacggcatctatgtcagcgacaagggcgccatc 696 ||||||| |||||||| || ||||||||| ||||| Sbjct: 579 ttggacggtatctatgtgagtgacaagggccccatc 614
>gb|AY107309.1| Zea mays PCO113532 mRNA sequence Length = 1063 Score = 442 bits (223), Expect = e-120 Identities = 396/456 (86%) Strand = Plus / Plus Query: 241 acccgcaacttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctc 300 |||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||| Sbjct: 256 acccgcaacttcaagcacctcaacctcgacttccagctgcaggacggcggtcgcaagctc 315 Query: 301 aaggttgacgcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcc 360 ||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 316 aaggtcgacgcctggtttggcacccgccgaaccatggccgccatccgcaccgccatctcc 375 Query: 361 cacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtc 420 |||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||| Sbjct: 376 cacgtccagaacctcatcgcaggcgtcaccaagggtttccgctacaagatgcggttcgtc 435 Query: 421 tacgcccacttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcagg 480 ||||| ||||| ||||||||||| ||||||||| |||||| || ||| |||||||| Sbjct: 436 tacgctcactttcccatcaacgcctccatcaccaacgccaactccgccattgagatcaga 495 Query: 481 aacttcctcggagnnnnnnnggtaaggaaagttgacatgcttgacggtgtgacaatcctg 540 ||||||||||| | ||| ||||| ||||| |||||||| |||||||| ||| || Sbjct: 496 aacttcctcggggagaagaaggtcaggaaggttgatatgcttgaaggtgtgaccatcttg 555 Query: 541 cggtccgagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcc 600 || || |||||||||||||| ||| | || || || |||||||| ||||||||||||| Sbjct: 556 cgttcagagaaggtcaaggatgagcttgttcttgaaggcaatgatgttgagcttgtctct 615 Query: 601 cgctctgctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttc 660 ||||| ||||| || || |||||||||||||| || ||||| ||||| ||| |||||||| Sbjct: 616 cgctccgctgctctcataaaccagaaatgccatgtcaagaagaaggatatccggaagttc 675 Query: 661 ctggacggcatctatgtcagcgacaagggcgccatc 696 ||||||| |||||||| || ||||||||| ||||| Sbjct: 676 ttggacggtatctatgtgagtgacaagggccccatc 711
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 406 bits (205), Expect = e-110 Identities = 319/357 (89%) Strand = Plus / Minus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 18585053 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 18584994 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 18584993 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 18584934 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccggaagctcaaggttgac 309 ||||||||||||||||||||||||||||||| ||| |||||||| ||||| |||| ||| Sbjct: 18584933 ttcaagcacctcaacctcgacttccagctgctggagggcggccgcaagctgcaggtggac 18584874 Query: 310 gcctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 369 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18584873 gcgtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccag 18584814 Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 18584813 aacctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctacgctcac 18584754 Query: 430 ttccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttc 486 |||||||||||||| ||||||||| ||||| || ||||||||||||||||||| Sbjct: 18584753 ttccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttc 18584697 Score = 95.6 bits (48), Expect = 3e-16 Identities = 102/120 (85%) Strand = Plus / Minus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 ||||| ||||||||||| || || ||||| ||| ||||||| |||||||| ||||||||| Sbjct: 18584564 aggaaggttgacatgctcgagggggtgaccatcttgcggtcggagaaggtgaaggacgag 18584505 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 ||||||| || ||||| ||||| ||||| ||||| ||||| || ||||| ||||||||| Sbjct: 18584504 ctcgtcctcgacggcaacgacatcgagctcgtctctcgctcagcagccctcatcaaccag 18584445 Score = 87.7 bits (44), Expect = 7e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||||||||||||||||||||| |||||||||||| |||| || ||||| || ||| Sbjct: 18583713 cagaaatgccacgtgaagaacaaggatatcaggaagttcttggatggtatctacgtgagc 18583654 Query: 682 gacaaggg 689 |||||||| Sbjct: 18583653 gacaaggg 18583646
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 317 bits (160), Expect = 4e-83 Identities = 311/360 (86%), Gaps = 6/360 (1%) Strand = Plus / Minus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| | || Sbjct: 183356 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtgcacgt 183297 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | |||||| || | ||||| ||||||||| || | ||||| |||||||||||||| Sbjct: 183296 ggcggcgaaggtggtgacggtggagggtccccgtgggaagctgacgcgcaacttcaagca 183237 Query: 258 cctcaacctcgacttccagctgcagga--tggcggccg----gaagctcaaggttgacgc 311 ||| ||||| ||||||||||||| ||| ||| || | |||||| |||| ||||| Sbjct: 183236 cctgaacctggacttccagctgctggaggtggagggggtgaggaagctgcaggtggacgc 183177 Query: 312 ctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 183176 gtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 183117 Query: 372 cctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccactt 431 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 183116 cctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctatgcccattt 183057 Query: 432 ccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcgg 491 |||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 183056 ccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcctcgg 182997 Score = 119 bits (60), Expect = 2e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 |||||||| ||||||||||| ||||||||||| |||| || |||||||||||||| ||| Sbjct: 182513 aggaaagtggacatgcttgagggtgtgacaattttgcgttctgagaaggtcaaggatgag 182454 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 | ||||| ||||||||||| || |||||||||||||| ||||| || |||||||||||| Sbjct: 182453 ctggtccttgatggcaatgatatcgagcttgtctcccgttctgcggcactgatcaaccag 182394 Score = 111 bits (56), Expect = 5e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 180690 cagaaatgccacgtcaagaacaaggatatcaggaagttcctggatggcatctatgtcagt 180631 Query: 682 gacaagggcgccatca 697 ||||||||| |||||| Sbjct: 180630 gacaagggcaccatca 180615
>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1435_F07 Length = 139041 Score = 317 bits (160), Expect = 4e-83 Identities = 311/360 (86%), Gaps = 6/360 (1%) Strand = Plus / Minus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| | || Sbjct: 132383 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtgcacgt 132324 Query: 198 gtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaacttcaagca 257 | | |||||| || | ||||| ||||||||| || | ||||| |||||||||||||| Sbjct: 132323 ggcggcgaaggtggtgacggtggagggtccccgtgggaagctgacgcgcaacttcaagca 132264 Query: 258 cctcaacctcgacttccagctgcagga--tggcggccg----gaagctcaaggttgacgc 311 ||| ||||| ||||||||||||| ||| ||| || | |||||| |||| ||||| Sbjct: 132263 cctgaacctggacttccagctgctggaggtggagggggtgaggaagctgcaggtggacgc 132204 Query: 312 ctggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 132203 gtggttcggcacccgccgcaccatggccgccatccgcaccgccatctcccacgtccagaa 132144 Query: 372 cctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccactt 431 |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || Sbjct: 132143 cctcatcaccggcgtcaccaagggctaccgctacaagatgcgcttcgtctatgcccattt 132084 Query: 432 ccccatcaacgcatccatcaccgcagccaaccgcggcatcgagatcaggaacttcctcgg 491 |||||||||||| ||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 132083 ccccatcaacgcctccatcaccaactccaacaccgccatcgagatcaggaacttcctcgg 132024 Score = 119 bits (60), Expect = 2e-23 Identities = 105/120 (87%) Strand = Plus / Minus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 |||||||| ||||||||||| ||||||||||| |||| || |||||||||||||| ||| Sbjct: 131540 aggaaagtggacatgcttgagggtgtgacaattttgcgttctgagaaggtcaaggatgag 131481 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 | ||||| ||||||||||| || |||||||||||||| ||||| || |||||||||||| Sbjct: 131480 ctggtccttgatggcaatgatatcgagcttgtctcccgttctgcggcactgatcaaccag 131421 Score = 111 bits (56), Expect = 5e-21 Identities = 71/76 (93%) Strand = Plus / Minus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 129717 cagaaatgccacgtcaagaacaaggatatcaggaagttcctggatggcatctatgtcagt 129658 Query: 682 gacaagggcgccatca 697 ||||||||| |||||| Sbjct: 129657 gacaagggcaccatca 129642
>dbj|D38012.1|RICRPL9 Oryza sativa (japonica cultivar-group) mRNA for ribosomal protein L9, partial cds Length = 527 Score = 240 bits (121), Expect = 8e-60 Identities = 201/230 (87%) Strand = Plus / Plus Query: 468 catcgagatcaggaacttcctcggagnnnnnnnggtaaggaaagttgacatgcttgacgg 527 |||||||||||||||||||||||| | ||| |||||||| ||||||||||| || Sbjct: 32 catcgagatcaggaacttcctcggcgagaagaaggtgaggaaagtggacatgcttgaggg 91 Query: 528 tgtgacaatcctgcggtccgagaaggtcaaggacgagatcgtcctggatggcaatgacat 587 ||||||||| |||| || |||||||||||||| ||| | ||||| ||||||||||| || Sbjct: 92 tgtgacaattttgcgttctgagaaggtcaaggatgagctggtccttgatggcaatgatat 151 Query: 588 tgagcttgtctcccgctctgctgccctgatcaaccagaaatgccacgtgaagaacaagga 647 |||||||||||||| ||||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 152 cgagcttgtctcccgttctgcggcactgatcaaccagaaatgccacgtcaagaacaagga 211 Query: 648 catcaggaagttcctggacggcatctatgtcagcgacaagggcgccatca 697 ||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct: 212 tatcaggaagttcctggatggcatctatgtcagtgacaagggcaccatca 261
>gb|AY072817.1| Oryza sativa ARE1 mRNA, partial cds Length = 218 Score = 143 bits (72), Expect = 1e-30 Identities = 141/164 (85%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| ||||||| Sbjct: 54 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggggtgacg 113 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 114 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 173 Query: 250 ttcaagcacctcaacctcgacttccagctgcaggatggcggccg 293 ||||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 174 ttcaagcacctcaacctcgacttccagctgctggagggcggccg 217
>dbj|D29705.1|RICYK17 Oryza sativa mRNA, partial homologous to GAmRNA (cloneF) Length = 207 Score = 121 bits (61), Expect = 5e-24 Identities = 127/149 (85%) Strand = Plus / Plus Query: 130 ccggcgaggatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacg 189 ||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||| |||||| Sbjct: 59 ccggcgaagatgaagaccatcctggcgtccgagacgatggagatcccggagggtgtgacg 118 Query: 190 gtgaaggtgtctgcgaagatgatctcggtgacgggtccccggggcaccctgacccgcaac 249 ||| |||| | |||||| || | ||||| ||| ||||| || | |||||||||||| Sbjct: 119 gtgcaggtcgccgcgaaggtggtgacggtggagggcccccgcgggaagctgacccgcaac 178 Query: 250 ttcaagcacctcaacctcgacttccagct 278 ||||||||||||||||||||||||||||| Sbjct: 179 ttcaagcacctcaacctcgacttccagct 207
>emb|CT984912.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 758 Score = 117 bits (59), Expect = 8e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 341 ccatccgcaccgccatctcccacgtccagaacctcatcaccggcgtcaccaagggcttcc 400 ||||||| |||||| || ||||||| |||||||||||||||||||||||||||| | | Sbjct: 160 ccatccggaccgccctcagccacgtcgagaacctcatcaccggcgtcaccaagggttaca 219 Query: 401 gctacaagatgcgcttcgtctacgcccacttccccatcaacgc 443 | ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 220 ggtacaagatgcgcttcgtgtacgctcacttccccatcaacgc 262 Score = 115 bits (58), Expect = 3e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 544 tccgagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgc 603 ||||||||||| ||||| || | ||| ||||||| |||||||| |||||||| ||||| Sbjct: 363 tccgagaaggtgaaggatgaactggtcgtggatgggaatgacatcgagcttgtttcccgg 422 Query: 604 tctgctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctg 663 ||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 423 tcttgcgccctcataaaccagaaatgccatgtgaagaacaaggatatcaggaagttcctt 482 Query: 664 gacggcatctatgtcagcgacaaggg 689 || || || ||||||||||| ||||| Sbjct: 483 gatggtatttatgtcagcgagaaggg 508 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 241 acccgcaacttcaagcacctcaacctcgacttccagctg 279 ||||||||||||||||||||||||||||||||||||||| Sbjct: 48 acccgcaacttcaagcacctcaacctcgacttccagctg 86
>emb|CT983941.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 757 Score = 117 bits (59), Expect = 8e-23 Identities = 92/103 (89%) Strand = Plus / Plus Query: 341 ccatccgcaccgccatctcccacgtccagaacctcatcaccggcgtcaccaagggcttcc 400 ||||||| |||||| || ||||||| |||||||||||||||||||||||||||| | | Sbjct: 160 ccatccggaccgccctcagccacgtcgagaacctcatcaccggcgtcaccaagggttaca 219 Query: 401 gctacaagatgcgcttcgtctacgcccacttccccatcaacgc 443 | ||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 220 ggtacaagatgcgcttcgtgtacgctcacttccccatcaacgc 262 Score = 115 bits (58), Expect = 3e-22 Identities = 124/146 (84%) Strand = Plus / Plus Query: 544 tccgagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgc 603 ||||||||||| ||||| || | ||| ||||||| |||||||| |||||||| ||||| Sbjct: 363 tccgagaaggtgaaggatgaactggtcgtggatgggaatgacatcgagcttgtttcccgg 422 Query: 604 tctgctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctg 663 ||| ||||| || |||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 423 tcttgcgccctcataaaccagaaatgccatgtgaagaacaaggatatcaggaagttcctt 482 Query: 664 gacggcatctatgtcagcgacaaggg 689 || || || ||||||||||| ||||| Sbjct: 483 gatggtatttatgtcagcgagaaggg 508 Score = 77.8 bits (39), Expect = 7e-11 Identities = 39/39 (100%) Strand = Plus / Plus Query: 241 acccgcaacttcaagcacctcaacctcgacttccagctg 279 ||||||||||||||||||||||||||||||||||||||| Sbjct: 48 acccgcaacttcaagcacctcaacctcgacttccagctg 86
>gb|DQ235200.1| Solanum tuberosum clone 171E12 unknown mRNA Length = 858 Score = 105 bits (53), Expect = 3e-19 Identities = 152/185 (82%) Strand = Plus / Plus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 |||||||||||||||||||| || || ||| | | || || |||||||| ||||| ||| Sbjct: 437 aggaaagttgacatgcttgatggagtaacagttgttcgatctgagaaggttaaggatgag 496 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 | || ||||||| |||||||||||||| || || |||||||| ||||| || ||||| Sbjct: 497 cttgtattggatggaaatgacattgagctcgtttctcgctctgcagccctcattaaccaa 556 Query: 625 aaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgac 684 |||||||| |||||||||||||| ||| | ||||| || || || ||||||||||| || Sbjct: 557 aaatgccatgtgaagaacaaggatatccgaaagtttcttgatggtatctatgtcagtgag 616 Query: 685 aaggg 689 ||||| Sbjct: 617 aaggg 621
>gb|DQ207848.1| Solanum tuberosum clone 074A07 unknown mRNA Length = 838 Score = 105 bits (53), Expect = 3e-19 Identities = 152/185 (82%) Strand = Plus / Plus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 ||||||||||| |||||||||||||| || | | || || ||||| || ||||| ||| Sbjct: 404 aggaaagttgatatgcttgacggtgtcactgttgtccgctcagagaaagttaaggatgag 463 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 | || ||||||| ||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 464 ttggttttggatggaaatgacattgaacttgtctctcgatcagctgccctgataaaccaa 523 Query: 625 aaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgac 684 |||||||| ||||||||||| || ||| | |||||||| || || ||||| |||||||| Sbjct: 524 aaatgccatgtgaagaacaaagatatccgtaagttccttgatggtatctacgtcagcgag 583 Query: 685 aaggg 689 ||||| Sbjct: 584 aaggg 588
>gb|BT013259.1| Lycopersicon esculentum clone 134794R, mRNA sequence Length = 870 Score = 105 bits (53), Expect = 3e-19 Identities = 152/185 (82%) Strand = Plus / Plus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 ||||||||||| |||||||||||||| || | | || || ||||| || ||||| ||| Sbjct: 433 aggaaagttgatatgcttgacggtgtcactgttgtccgttcagagaaagttaaggatgag 492 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 | || ||||||| ||||||||||| |||||||| || || ||||||||||| ||||| Sbjct: 493 ttggttttggatggaaatgacattgaacttgtctcacgatcagctgccctgataaaccaa 552 Query: 625 aaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgac 684 |||||||| ||||||||||| || ||| | |||||||| || || ||||| |||||||| Sbjct: 553 aaatgccatgtgaagaacaaagatatccgtaagttccttgatggtatctacgtcagcgag 612 Query: 685 aaggg 689 ||||| Sbjct: 613 aaggg 617
>ref|NM_103046.2| Arabidopsis thaliana structural constituent of ribosome (AT1G33120) mRNA, complete cds Length = 966 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 567 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 626 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 627 tatgttagcga 637 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 351 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 404 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 192 ttcaagcatctcaacctcgatttccagctg 221
>gb|AF339694.1| Arabidopsis thaliana putative ribosomal protein L9 (At1g33120) mRNA, complete cds Length = 635 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 487 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 546 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 547 tatgttagcga 557 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 271 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 324 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 112 ttcaagcatctcaacctcgatttccagctg 141
>gb|AF326873.1| Arabidopsis thaliana putative ribosomal protein L9 (At1g33120) mRNA, complete cds Length = 824 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 567 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 626 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 627 tatgttagcga 637 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 351 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 404 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 192 ttcaagcatctcaacctcgatttccagctg 221
>gb|AY128910.1| Arabidopsis thaliana ribosomal protein L9, putative (At1g33120) mRNA, complete cds Length = 661 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 487 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 546 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 547 tatgttagcga 557 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 271 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 324 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 112 ttcaagcatctcaacctcgatttccagctg 141
>gb|AY072446.1| Arabidopsis thaliana ribosomal protein L9, putative (At1g33120) mRNA, complete cds Length = 770 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 531 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 590 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 591 tatgttagcga 601 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 315 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 368 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 156 ttcaagcatctcaacctcgatttccagctg 185
>gb|AF324688.2|AF324688 Arabidopsis thaliana At1g33120 (At1g33120/T9L6_8) mRNA, complete cds Length = 808 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 567 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 626 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 627 tatgttagcga 637 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 351 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 404 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 192 ttcaagcatctcaacctcgatttccagctg 221
>emb|BX814591.1|CNS0ACBL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB83ZB06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 817 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 555 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 614 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 615 tatgttagcga 625 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 339 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 392 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 180 ttcaagcatctcaacctcgatttccagctg 209
>emb|BX816763.1|CNS0ABNW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZC07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 873 Score = 93.7 bits (47), Expect = 1e-15 Identities = 65/71 (91%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatc 672 ||||||||||||||||| ||||||||||| ||||| |||||||||||||| ||||| ||| Sbjct: 560 ctgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatc 619 Query: 673 tatgtcagcga 683 ||||| ||||| Sbjct: 620 tatgttagcga 630 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 344 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 397 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 185 ttcaagcatctcaacctcgatttccagctg 214
>gb|AY310780.1| Nicotiana benthamiana clone 8-334 unknown mRNA Length = 252 Score = 87.7 bits (44), Expect = 7e-14 Identities = 68/76 (89%) Strand = Plus / Plus Query: 572 tggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccagaaatgcc 631 ||||||| |||||||||||||| || || |||||||||||||| ||||| || ||||||| Sbjct: 149 tggatggaaatgacattgagctcgtttctcgctctgctgccctcatcaatcaaaaatgcc 208 Query: 632 acgtgaagaacaagga 647 | |||||||||||||| Sbjct: 209 atgtgaagaacaagga 224
>ref|XM_863754.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9465.2), mRNA Length = 579 Score = 81.8 bits (41), Expect = 4e-12 Identities = 65/73 (89%) Strand = Plus / Plus Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 |||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| ||| Sbjct: 229 aacctcatcatcggtgtcaccaagggcttcaagtacaagatgcgctacgtctacgctcac 288 Query: 430 ttccccatcaacg 442 || |||||||||| Sbjct: 289 tttcccatcaacg 301
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 79.8 bits (40), Expect = 2e-11 Identities = 55/60 (91%) Strand = Plus / Minus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||| ||||| ||||||||||| ||||| |||| ||||||||||||||||||||| Sbjct: 233595 gatgaagaccatcctggcgtcggagacaatggagatcctggaggaggtgacggtgaaggt 233536 Score = 71.9 bits (36), Expect = 4e-09 Identities = 54/60 (90%) Strand = Plus / Minus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtgaaggt 197 ||||||||| ||||| ||||||||||| ||||| |||| |||||||||||| |||||||| Sbjct: 343450 gatgaagaccatcctggcgtcggagacaatggagatcctggaggaggtgacagtgaaggt 343391
>ref|NM_103048.3| Arabidopsis thaliana structural constituent of ribosome (AT1G33140) mRNA, complete cds Length = 935 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 573 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 632 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 633 atgttagcga 642 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 356 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 409 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 197 ttcaagcatctcaacctcgatttccagctg 226
>dbj|AK222147.1| Arabidopsis thaliana mRNA for ribosomal protein L9, partial cds, clone: RAFL23-02-D12 Length = 504 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 201 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 260 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 261 atgttagcga 270
>gb|AF375419.1| Arabidopsis thaliana At1g33140/T9L6_10 mRNA, complete cds Length = 898 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 536 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 595 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 596 atgttagcga 605 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 319 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 372 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 160 ttcaagcatctcaacctcgatttccagctg 189
>gb|AY058051.1| Arabidopsis thaliana At1g33140/T9L6_10 mRNA, complete cds Length = 809 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 542 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 601 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 602 atgttagcga 611 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 325 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 378 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 166 ttcaagcatctcaacctcgatttccagctg 195
>gb|AY054156.1| Arabidopsis thaliana At1g33140/T9L6_10 mRNA, complete cds Length = 585 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 488 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 547 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 548 atgttagcga 557 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 271 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 324 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 112 ttcaagcatctcaacctcgatttccagctg 141
>emb|Y13428.1|HCRIBOL9 Haemonchus contortus mRNA for ribosomal protein L9 Length = 460 Score = 75.8 bits (38), Expect = 3e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 385 gtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||| ||||||||||||||||| | ||| |||||||| ||||||||||||| Sbjct: 281 gtcaccaagggtttccgctacaagatgcgatccgtatacgcccatttccccatcaacg 338
>emb|X91958.1|AT60SRL9 A.thaliana mRNA for 60S ribosomal protein L9 Length = 768 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 517 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 576 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 577 atgttagcga 586 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 138 ttcaagcatctcaacctcgatttccagctg 167
>gb|AY086680.1| Arabidopsis thaliana clone 26744 mRNA, complete sequence Length = 829 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 574 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 633 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 634 atgttagcga 643 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 357 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 410 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 198 ttcaagcatctcaacctcgatttccagctg 227
>gb|AY039593.1| Arabidopsis thaliana At1g33140/T9L6_10 mRNA, complete cds Length = 929 Score = 75.8 bits (38), Expect = 3e-10 Identities = 62/70 (88%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 |||||||||||||||| ||||||||||| ||||| ||||||||||| || || || |||| Sbjct: 567 tgatcaaccagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatct 626 Query: 674 atgtcagcga 683 |||| ||||| Sbjct: 627 atgttagcga 636 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 350 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 403 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 191 ttcaagcatctcaacctcgatttccagctg 220
>gb|AC084598.1|CBRG42J05 Caenorhabditis briggsae cosmid G42J05, complete sequence Length = 40229 Score = 75.8 bits (38), Expect = 3e-10 Identities = 89/106 (83%) Strand = Plus / Minus Query: 337 gccgccatccgcaccgccatctcccacgtccagaacctcatcaccggcgtcaccaagggc 396 |||||||||||||||| | |||||||||| ||||| | |||| || |||||| || Sbjct: 11628 gccgccatccgcaccgtctgctcccacgtcaagaacatgatcaagggagtcaccctcgga 11569 Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||||||| ||| || ||||| ||||||||||||| Sbjct: 11568 ttccgctacaagatgcgctccgtatatgcccatttccccatcaacg 11523
>gb|AC021045.2|AC021045 Arabidopsis thaliana chromosome I BAC T9L6 genomic sequence, complete sequence Length = 90632 Score = 75.8 bits (38), Expect = 3e-10 Identities = 56/62 (90%) Strand = Plus / Plus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||| ||||||||||| ||||| |||||||||||||| ||||| |||||||| ||| Sbjct: 44943 cagaaatgtcacgtgaagaagaaggatatcaggaagttccttgacggtatctatgttagc 45002 Query: 682 ga 683 || Sbjct: 45003 ga 45004 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||| ||||||||||| ||||| ||||||||||| || || || |||||||| ||| Sbjct: 57222 cagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatctatgttagc 57281 Query: 682 ga 683 || Sbjct: 57282 ga 57283 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 44065 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 44118 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 56439 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 56492 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 43906 ttcaagcatctcaacctcgatttccagctg 43935 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 56280 ttcaagcatctcaacctcgatttccagctg 56309
>gb|DQ245850.1| Zea mays clone 20857 mRNA sequence Length = 893 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 614 tgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatct 673 ||||||||||||||||||| |||||||| ||||| ||||| ||||| || || || |||| Sbjct: 540 tgatcaaccagaaatgccatgtgaagaagaaggatatcagaaagtttcttgatggtatct 599 Query: 674 atgtcagcgacaagggc 690 |||| ||||| |||||| Sbjct: 600 atgtgagcgagaagggc 616 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagct 278 |||||||| ||||||||||| |||||||| Sbjct: 164 ttcaagcatctcaacctcgatttccagct 192
>gb|AY130411.1| Myxine glutinosa ribosomal protein L9 mRNA, partial cds Length = 480 Score = 73.8 bits (37), Expect = 1e-09 Identities = 67/77 (87%) Strand = Plus / Plus Query: 364 gtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctac 423 ||||||||| | |||| || |||||| ||||||||||||||||||||||| ||| || Sbjct: 151 gtccagaacatgatcaagggtgtcaccttgggcttccgctacaagatgcgctccgtgtat 210 Query: 424 gcccacttccccatcaa 440 ||||||||||||||||| Sbjct: 211 gcccacttccccatcaa 227
>ref|XM_566460.1| Cryptococcus neoformans var. neoformans JEC21 60s ribosomal protein l9 (CNA00250) partial mRNA Length = 661 Score = 71.9 bits (36), Expect = 4e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 376 atcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttcccc 435 |||| ||| |||||||||||||||| |||||||||||| | |||||||| || |||||| Sbjct: 250 atcatcggtgtcaccaagggcttcctctacaagatgcgacttgtctacgcgcatttcccc 309 Query: 436 atcaacgc 443 |||||||| Sbjct: 310 atcaacgc 317
>ref|XM_960036.1| Neurospora crassa OR74A hypothetical protein (NCU02744.1) partial mRNA Length = 582 Score = 69.9 bits (35), Expect = 2e-08 Identities = 59/67 (88%) Strand = Plus / Plus Query: 376 atcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttcccc 435 |||| ||| ||||||||||||||| ||||||||||||| |||||| ||||| |||||| Sbjct: 235 atcatcggtgtcaccaagggcttcaagtacaagatgcgctacgtctatgcccatttcccc 294 Query: 436 atcaacg 442 ||||||| Sbjct: 295 atcaacg 301
>dbj|AB226272.1| Aspergillus oryzae cDNA, contig sequence: AoEST3132 Length = 1032 Score = 67.9 bits (34), Expect = 6e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 385 gtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||| ||||||||||||| ||||||||| ||||| |||||||||| Sbjct: 425 gtcaccaagggcttcaagtacaagatgcgctacgtctacgctcactttcccatcaacg 482
>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 Length = 4429080 Score = 67.9 bits (34), Expect = 6e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 385 gtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||| ||||||||||||| ||||||||| ||||| |||||||||| Sbjct: 4295700 gtcaccaagggcttcaagtacaagatgcgctacgtctacgctcactttcccatcaacg 4295757
>ref|XM_381330.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01154.1) partial mRNA Length = 753 Score = 67.9 bits (34), Expect = 6e-08 Identities = 52/58 (89%) Strand = Plus / Plus Query: 385 gtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||| ||||||||||| | |||||||||||| ||||||||||||| Sbjct: 415 gtcaccaagggcttcaagtacaagatgcgatacgtctacgcccatttccccatcaacg 472
>ref|NM_117113.2| Arabidopsis thaliana structural constituent of ribosome (AT4G10450) mRNA, complete cds Length = 900 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 488 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 547 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggac 666 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| || || Sbjct: 548 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtttcttgat 607 Query: 667 ggcatctatgtcagcga 683 || |||||||| ||||| Sbjct: 608 ggtatctatgtgagcga 624
>gb|AY190735.1| Pagrus major ribosomal protein L9 mRNA, complete cds Length = 703 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 643 aaggacatcaggaagttcctggacggcatctatgtcagcga 683 |||||||||||||||||||||||||||||||| ||||||| Sbjct: 650 aaggacatcaggaagttcctggacggcatctacatcagcga 690 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||| ||||||| ||| |||||||| ||||||||||||| Sbjct: 272 ttccgctacaaaatgcgctccgtgtacgcccatttccccatcaacg 317
>gb|AY117346.1| Arabidopsis thaliana putative ribosomal protein L9 (At4g10450) mRNA, complete cds Length = 616 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 421 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 480 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggac 666 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| || || Sbjct: 481 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtttcttgat 540 Query: 667 ggcatctatgtcagcga 683 || |||||||| ||||| Sbjct: 541 ggtatctatgtgagcga 557
>gb|AY065259.1| Arabidopsis thaliana putative ribosomal protein L9 (At4g10450) mRNA, complete cds Length = 812 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 488 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 547 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggac 666 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| || || Sbjct: 548 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtttcttgat 607 Query: 667 ggcatctatgtcagcga 683 || |||||||| ||||| Sbjct: 608 ggtatctatgtgagcga 624
>gb|AY086090.1| Arabidopsis thaliana clone 21228 mRNA, complete sequence Length = 797 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 489 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 548 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggac 666 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| || || Sbjct: 549 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtttcttgat 608 Query: 667 ggcatctatgtcagcga 683 || |||||||| ||||| Sbjct: 609 ggtatctatgtgagcga 625
>emb|BX829170.1|CNS0A4I1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZF10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 834 Score = 65.9 bits (33), Expect = 2e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 427 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 486 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagttcctggac 666 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| || || Sbjct: 487 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtttcttgat 546 Query: 667 ggcatctatgtcagcga 683 || |||||||| ||||| Sbjct: 547 ggtatctatgtgagcga 563
>gb|AC149298.1| Populus trichocarpa clone Pop1-021H24, complete sequence Length = 146635 Score = 63.9 bits (32), Expect = 1e-06 Identities = 98/120 (81%) Strand = Plus / Minus Query: 505 aggaaagttgacatgcttgacggtgtgacaatcctgcggtccgagaaggtcaaggacgag 564 ||||| ||||| ||||||||||| || | || || || || || ||||| ||||| ||| Sbjct: 95354 aggaaggttgatatgcttgacggggttagtattctccgatctgaaaaggtgaaggatgag 95295 Query: 565 atcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctgatcaaccag 624 ||||||| ||||||||||| ||||||||||| || || || || ||| ||||||||||| Sbjct: 95294 ctcgtcctagatggcaatgatattgagcttgtttcacggtcggcagccttgatcaaccag 95235 Score = 61.9 bits (31), Expect = 4e-06 Identities = 64/75 (85%) Strand = Plus / Minus Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||| ||| ||||||| ||||||||||| ||||||||||| || || || || Sbjct: 90542 aaggtgaaggatgagctcgtcctagatggcaatgatattgagcttgtttcacggtcggca 90483 Query: 610 gccctgatcaaccag 624 ||| ||||||||||| Sbjct: 90482 gccttgatcaaccag 90468 Score = 54.0 bits (27), Expect = 0.001 Identities = 63/75 (84%) Strand = Plus / Minus Query: 550 aaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgct 609 ||||| ||||| ||| ||||||| ||||||||||| ||||||||||| || || || || Sbjct: 103030 aaggtgaaggatgagctcgtcctagatggcaatgatattgagcttgtttcacggtcggca 102971 Query: 610 gccctgatcaaccag 624 || ||||||||||| Sbjct: 102970 gctttgatcaaccag 102956
>gb|AC119415.13| Medicago truncatula clone mth2-27n2, complete sequence Length = 139330 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 368 agaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgccc 427 |||| |||||||| || ||||||||||| ||||||||||||||| | || || || || | Sbjct: 100581 agaatctcatcactggtgtcaccaagggattccgctacaagatgaggtttgtgtatgctc 100640 Query: 428 acttccccatcaacgc 443 | |||||||||||||| Sbjct: 100641 atttccccatcaacgc 100656 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagtt 659 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 101388 cagaaatgccatgttaagaagaaggatatcaggaagtt 101425
>emb|X97322.2|PSRPL9PRT Pisum sativum rpL9 gene for ribosomal protein L9 Length = 2641 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 ccacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatg 411 ||||||| |||| |||||||| || ||||||||||| ||||||||||||||| Sbjct: 1801 ccacgtcgagaatctcatcactggtgtcaccaagggtttccgctacaagatg 1852 Score = 44.1 bits (22), Expect = 0.91 Identities = 43/50 (86%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgt 596 |||||||| ||||| ||| | || ||||||| ||||||||||||||||| Sbjct: 2171 gagaaggtgaaggatgaggttgttttggatggaaatgacattgagcttgt 2220
>emb|X65155.1|PSGAMRF P.sativum GA mRNA (clone F) Length = 901 Score = 63.9 bits (32), Expect = 1e-06 Identities = 47/52 (90%) Strand = Plus / Plus Query: 360 ccacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatg 411 ||||||| |||| |||||||| || ||||||||||| ||||||||||||||| Sbjct: 291 ccacgtcgagaatctcatcactggtgtcaccaagggtttccgctacaagatg 342 Score = 58.0 bits (29), Expect = 6e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||| | || ||||||| ||||||||||||||||| || || || Sbjct: 478 gagaaggtgaaggatgaggttgttttggatggaaatgacattgagcttgtttctcgatca 537 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagtt 659 ||| || || |||||||||||||| || || || ||||| ||||||||||| Sbjct: 538 tgtgctcttattaaccagaaatgccatgttaaaaagaaggatatcaggaagtt 590
>gb|AC126789.20| Medicago truncatula clone mth2-36n23, complete sequence Length = 126875 Score = 63.9 bits (32), Expect = 1e-06 Identities = 65/76 (85%) Strand = Plus / Plus Query: 368 agaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgccc 427 |||| |||||||| || ||||||||||| ||||||||||||||| | || || || || | Sbjct: 54741 agaatctcatcactggtgtcaccaagggattccgctacaagatgaggtttgtgtatgctc 54800 Query: 428 acttccccatcaacgc 443 | |||||||||||||| Sbjct: 54801 atttccccatcaacgc 54816 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagtt 659 ||||||||||| || ||||| ||||| ||||||||||| Sbjct: 55548 cagaaatgccatgttaagaagaaggatatcaggaagtt 55585
>ref|XM_001229309.1| Chaetomium globosum CBS 148.51 conserved hypothetical protein (CHGG_02794) mRNA, complete cds Length = 579 Score = 61.9 bits (31), Expect = 4e-06 Identities = 58/67 (86%) Strand = Plus / Plus Query: 376 atcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttcccc 435 |||| |||||| |||||||||||| ||||||||||| | |||||||||||| || ||| Sbjct: 235 atcatcggcgtgaccaagggcttcaagtacaagatgcgttacgtctacgcccattttccc 294 Query: 436 atcaacg 442 ||||||| Sbjct: 295 atcaacg 301 Score = 48.1 bits (24), Expect = 0.058 Identities = 33/36 (91%) Strand = Plus / Plus Query: 639 gaacaaggacatcaggaagttcctggacggcatcta 674 ||||||||| ||| |||||||| ||||||||||||| Sbjct: 510 gaacaaggatatccggaagttcttggacggcatcta 545
>ref|XM_362383.1| Magnaporthe grisea 70-15 hypothetical protein (MG04829.4) partial mRNA Length = 585 Score = 60.0 bits (30), Expect = 2e-05 Identities = 51/58 (87%) Strand = Plus / Plus Query: 385 gtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||| | ||||||||||| | |||||||||||| ||||||||||||| Sbjct: 244 gtcaccaagggctacaagtacaagatgcgttacgtctacgcccatttccccatcaacg 301
>ref|XM_977388.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC433546), mRNA Length = 688 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||| ||||||||||||| ||||||||||||||||| Sbjct: 520 aacaagtacatcaggaagtttctggacggcatctatgt 557
>ref|XM_906947.2| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC433546), mRNA Length = 688 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||| ||||||||||||| ||||||||||||||||| Sbjct: 520 aacaagtacatcaggaagtttctggacggcatctatgt 557
>ref|XM_485172.3| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC433546), mRNA Length = 688 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||| ||||||||||||| ||||||||||||||||| Sbjct: 520 aacaagtacatcaggaagtttctggacggcatctatgt 557
>gb|DQ066193.1| Ixodes scapularis isolate ISUFL92 60S ribosomal protein L9 mRNA, complete cds Length = 570 Score = 60.0 bits (30), Expect = 2e-05 Identities = 39/42 (92%) Strand = Plus / Plus Query: 633 cgtgaagaacaaggacatcaggaagttcctggacggcatcta 674 ||||||||||||||||||| | |||||| ||||||||||||| Sbjct: 492 cgtgaagaacaaggacatccgaaagttcttggacggcatcta 533 Score = 58.0 bits (29), Expect = 6e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 388 accaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaa 440 ||||||||||||| |||||||||||| || |||||||||||||||||||| Sbjct: 247 accaagggcttccagtacaagatgcgcacggtgtacgcccacttccccatcaa 299
>gb|AC027035.5|AC027035 Arabidopsis thaliana chromosome 1 BAC T16O9 genomic sequence, complete sequence Length = 81609 Score = 60.0 bits (30), Expect = 2e-05 Identities = 54/62 (87%) Strand = Plus / Plus Query: 622 cagaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagc 681 |||||||| ||||||||||| ||||| ||||||||||| || || || |||||||| ||| Sbjct: 958 cagaaatgtcacgtgaagaagaaggatatcaggaagtttcttgatggtatctatgttagc 1017 Query: 682 ga 683 || Sbjct: 1018 ga 1019 Score = 52.0 bits (26), Expect = 0.004 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| || ||||||||||| |||||| Sbjct: 175 ttccgttacaagatgaggttcgtgtacgcccattttcccatcaacgcctccatc 228 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 16 ttcaagcatctcaacctcgatttccagctg 45
>emb|AL935150.10| Mouse DNA sequence from clone RP24-482A24 on chromosome 2, complete sequence Length = 163240 Score = 60.0 bits (30), Expect = 2e-05 Identities = 36/38 (94%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||| ||||||||||||| ||||||||||||||||| Sbjct: 15720 aacaagtacatcaggaagtttctggacggcatctatgt 15683
>ref|NM_001003861.1| Danio rerio ribosomal protein L9 (rpl9), mRNA gb|AY648736.1| Danio rerio 60S ribosomal protein L9 mRNA, complete cds Length = 644 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 499 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 555
>ref|XM_747184.1| Aspergillus fumigatus Af293 60S ribosomal protein L9 b (Afu1g09100) partial mRNA Length = 579 Score = 58.0 bits (29), Expect = 6e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 370 aacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccac 429 ||||| |||| ||| |||||| ||||||| ||||||||||||| ||||||||| ||| Sbjct: 229 aacctgatcatcggtgtcacccggggcttcaagtacaagatgcgctacgtctacgctcac 288 Query: 430 ttccccatcaacg 442 || |||||||||| Sbjct: 289 tttcccatcaacg 301
>emb|CR759875.6| Zebrafish DNA sequence from clone DKEY-274K22 in linkage group 1, complete sequence Length = 216255 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 36849 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 36793
>ref|XM_702523.1| PREDICTED: Danio rerio similar to Rpl9 protein, transcript variant 6 (LOC558574), mRNA Length = 848 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 717 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 773
>ref|XM_702522.1| PREDICTED: Danio rerio similar to Rpl9 protein, transcript variant 5 (LOC558574), mRNA Length = 847 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 716 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 772
>ref|XM_679640.1| PREDICTED: Danio rerio similar to Rpl9 protein, transcript variant 1 (LOC558574), mRNA Length = 645 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 516 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 572
>ref|XM_702521.1| PREDICTED: Danio rerio similar to Rpl9 protein, transcript variant 4 (LOC558574), mRNA Length = 736 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 605 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 661
>ref|XM_702519.1| PREDICTED: Danio rerio similar to Rpl9 protein, transcript variant 2 (LOC558574), mRNA Length = 768 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 637 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 693
>emb|CR405706.7| Zebrafish DNA sequence from clone CH211-233D12 in linkage group 1, complete sequence Length = 181249 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 127573 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 127517
>emb|BX936325.9| Zebrafish DNA sequence from clone CH211-74P16 in linkage group 1, complete sequence Length = 185075 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 123714 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 123770
>gb|BC090911.1| Danio rerio ribosomal protein L9, mRNA (cDNA clone MGC:103730 IMAGE:7266206), complete cds Length = 852 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 701 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 757
>emb|BX827856.1|CNS0A3Y4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH27ZF12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 845 Score = 58.0 bits (29), Expect = 6e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctct 606 |||||||| ||||| ||||| | || || || ||||| ||||||||||| || || ||| Sbjct: 479 gagaaggttaaggatgagattattcttgagggaaatgatattgagcttgtttcacggtct 538 Query: 607 gctgccctgatcaaccagaaatgccacgtgaagaacaaggacatcaggaagtt 659 ||| ||||||| |||||||| || |||||||| ||||| ||||||||||| Sbjct: 539 tgtgctttgatcaatcagaaatgtcatgtgaagaagaaggatatcaggaagtt 591
>emb|AL844559.14| Zebrafish DNA sequence from clone DKEY-14K1, complete sequence Length = 216608 Score = 58.0 bits (29), Expect = 6e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||| ||| ||||||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 183413 gtgaggaagaaggacatccggaagttcctggatgggatttatgtcagcgagaagggc 183469
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 56.0 bits (28), Expect = 2e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgc 443 ||||||||| |||||||||||| | |||||||| || |||||||||||||| Sbjct: 76408 agggcttcctctacaagatgcgacttgtctacgcgcatttccccatcaacgc 76459
>ref|XM_504535.1| Yarrowia lipolytica CLIB122, YALI0E29073g predicted mRNA Length = 567 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 403 tacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||| | |||||||||||| ||||||||||||| Sbjct: 262 tacaagatgcgatacgtctacgcccatttccccatcaacg 301
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 56.0 bits (28), Expect = 2e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 403 tacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||| | |||||||||||| ||||||||||||| Sbjct: 3440059 tacaagatgcgatacgtctacgcccatttccccatcaacg 3440020
>gb|AY020397.1| Oryza sativa microsatellite MRG2722 containing (GA)X16, genomic sequence Length = 232 Score = 54.0 bits (27), Expect = 0.001 Identities = 48/55 (87%) Strand = Plus / Plus Query: 138 gatgaagacgatccttgcgtcggagacgatggatatcccggaggaggtgacggtg 192 ||||||||||||| | || |||||||||||||| |||||| || |||||||||| Sbjct: 139 gatgaagacgatcttggcttcggagacgatggagatcccgtcgggggtgacggtg 193
>gb|BC069963.1| Mus musculus cDNA clone IMAGE:5039327, partial cds Length = 1505 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 244 agggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 294 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 1209 aacaaggatatcaggaagtttttggacggcatctatgt 1246
>gb|AC136513.2| Mus musculus BAC clone RP23-477N9 from chromosome 5, complete sequence Length = 188517 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 152410 agggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 152460 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 153375 aacaaggatatcaggaagtttttggacggcatctatgt 153412
>dbj|AK050296.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730035F01 product:ribosomal protein L9, full insert sequence Length = 2652 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 1405 agggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 1455 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 2370 aacaaggatatcaggaagtttttggacggcatctatgt 2407
>dbj|AK053431.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130017A20 product:ribosomal protein L9, full insert sequence Length = 2691 Score = 54.0 bits (27), Expect = 0.001 Identities = 45/51 (88%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 1444 agggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 1494 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 2409 aacaaggatatcaggaagtttttggacggcatctatgt 2446
>emb|AJ718406.1| Nicotiana tabacum cDNA-AFLP-fragment BSTC-22-260B, cultivar Bright Yellow 2 Length = 219 Score = 54.0 bits (27), Expect = 0.001 Identities = 72/87 (82%) Strand = Plus / Plus Query: 368 agaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgccc 427 |||| |||||||| || || ||||| || | ||||||||||||||| ||||| || || | Sbjct: 34 agaatctcatcactggtgtgaccaaaggttaccgctacaagatgcgtttcgtgtatgctc 93 Query: 428 acttccccatcaacgcatccatcaccg 454 |||| || ||||| || |||||||||| Sbjct: 94 actttccgatcaatgcctccatcaccg 120
>gb|AC101221.12| Mus musculus chromosome 13, clone RP23-96E4, complete sequence Length = 258269 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 138751 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 138702
>ref|XR_003890.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L9 (LOC672532), mRNA Length = 718 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 539 aacaaggatatcaggaagtttttggacggcatctatgt 576 Score = 50.1 bits (25), Expect = 0.015 Identities = 43/49 (87%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||| ||||||||||| | || ||||| ||||||||||||||| Sbjct: 292 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaac 340
>ref|XR_002003.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L9 (LOC667290), mRNA Length = 718 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 539 aacaaggatatcaggaagtttttggacggcatctatgt 576 Score = 50.1 bits (25), Expect = 0.015 Identities = 43/49 (87%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||| ||||||||||| | || ||||| ||||||||||||||| Sbjct: 292 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaac 340
>ref|XM_982604.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC637379), mRNA Length = 762 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 324 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 373 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 571 aacaaggatatcaggaagtttttggacggcatctatgt 608
>ref|XM_990486.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC637379), mRNA Length = 653 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 222 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 271 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 469 aacaaggatatcaggaagtttttggacggcatctatgt 506
>ref|XM_925735.2| PREDICTED: Mus musculus similar to ribosomal protein L9, transcript variant 2 (LOC637379), mRNA Length = 660 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 222 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 271 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 469 aacaaggatatcaggaagtttttggacggcatctatgt 506
>ref|XM_484272.3| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC432768), mRNA Length = 724 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 284 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 333
>ref|XR_002858.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC670203), mRNA Length = 714 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 539 aacaaggatatcaggaagtttttggacggcatctatgt 576
>ref|XR_004671.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC674636), mRNA Length = 713 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 539 aacaaggatatcaggaagtttttggacggcatctatgt 576
>gb|AC102159.10| Mus musculus chromosome 19, clone RP23-398L11, complete sequence Length = 197134 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 121038 aacaaggatatcaggaagtttttggacggcatctatgt 121075 Score = 44.1 bits (22), Expect = 0.91 Identities = 43/50 (86%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 120791 gggcttccaatacaagatgcggtctgtgtacgctcacttccccatcaacg 120840
>gb|BC083329.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:102003 IMAGE:6824346), complete cds Length = 698 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 264 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 313 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 511 aacaaggatatcaggaagtttttggacggcatctatgt 548
>gb|BC083166.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:102393 IMAGE:6397429), complete cds Length = 701 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 266 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 315 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 513 aacaaggatatcaggaagtttttggacggcatctatgt 550
>gb|AC006679.2| Caenorhabditis elegans cosmid R13A5, complete sequence Length = 56448 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Minus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||||| | ||| || ||||| ||||||||||||| Sbjct: 33848 ttccgctacaagatgcgttccgtatatgcccatttccccatcaacg 33803
>gb|BC081435.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:102002 IMAGE:6824107), complete cds Length = 688 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 261 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 310 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 508 aacaaggatatcaggaagtttttggacggcatctatgt 545
>gb|AC125233.4| Mus musculus BAC clone RP23-9D24 from chromosome 5, complete sequence Length = 212792 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 87689 aacaaggatatcaggaagtttttggacggcatctatgt 87652
>gb|BC013165.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:6543 IMAGE:2655358), complete cds Length = 702 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 275 gggcttccgatacaagatgcgttctgtgtacgctcacttccccatcaacg 324 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 522 aacaaggatatcaggaagtttttggacggcatctatgt 559
>gb|AC129539.11| Mus musculus chromosome 16, clone RP23-246B24, complete sequence Length = 238585 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 141224 aacaaggatatcaggaagtttttggacggcatctatgt 141261 Score = 50.1 bits (25), Expect = 0.015 Identities = 43/49 (87%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||| ||||||||||| | || ||||| ||||||||||||||| Sbjct: 140977 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaac 141025
>gb|AC107711.13| Mus musculus chromosome 14, clone RP23-291I12, complete sequence Length = 228302 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 216106 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 216155 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 216353 aacaaggatatcaggaagtttttggacggcatctatgt 216390
>gb|AC115752.8| Mus musculus chromosome 19, clone RP23-18M16, complete sequence Length = 214925 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 59805 aacaaggatatcaggaagtttttggacggcatctatgt 59842 Score = 44.1 bits (22), Expect = 0.91 Identities = 43/50 (86%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 |||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 59558 gggcttccaatacaagatgcggtctgtgtacgctcacttccccatcaacg 59607
>gb|BC089319.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:102001 IMAGE:6823996), complete cds Length = 765 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 264 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 313 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 511 aacaaggatatcaggaagtttttggacggcatctatgt 548
>gb|AC097273.3| Genomic sequence for Mus musculus, clone RP23-118N13, complete sequence Length = 211657 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 188137 aacaaggatatcaggaagtttttggacggcatctatgt 188100 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 188384 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 188335
>dbj|AK153562.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830175N05 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK159980.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420041N04 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK168326.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730090P04 product:ribosomal protein L9, full insert sequence Length = 692 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 283 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 332 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 530 aacaaggatatcaggaagtttttggacggcatctatgt 567
>dbj|AK169217.1| Mus musculus 17 days embryo stomach cDNA, RIKEN full-length enriched library, clone:I920091H01 product:ribosomal protein L9, full insert sequence Length = 692 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 283 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 332 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 530 aacaaggatatcaggaagtttttggacggcatctatgt 567
>ref|NM_066259.3| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-9) (rpl-9) mRNA, complete cds Length = 630 Score = 52.0 bits (26), Expect = 0.004 Identities = 41/46 (89%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||||||| | ||| || ||||| ||||||||||||| Sbjct: 272 ttccgctacaagatgcgttccgtatatgcccatttccccatcaacg 317
>dbj|AK088166.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005G08 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK084278.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230017F17 product:ribosomal protein L9, full insert sequence Length = 695 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 286 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 335 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 533 aacaaggatatcaggaagtttttggacggcatctatgt 570
>dbj|AK012445.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700056G17 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK012331.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700038F06 product:ribosomal protein L9, full insert sequence Length = 693 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK017427.1| Mus musculus 10 days neonate head cDNA, RIKEN full-length enriched library, clone:5530400L19 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK017388.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430433M11 product:ribosomal protein L9, full insert sequence Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>dbj|AK191132.1| Mus musculus cDNA, clone:Y1G0104P04, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063797, based on BLAT search Length = 375 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 200 aacaaggatatcaggaagtttttggacggcatctatgt 237
>gb|BC093526.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:102392 IMAGE:5150493), complete cds Length = 744 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 264 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 313 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 511 aacaaggatatcaggaagtttttggacggcatctatgt 548
>ref|NM_011292.1| Mus musculus ribosomal protein L9 (Rpl9), mRNA gb|AF260271.1|AF260271 Mus musculus 60S ribosomal Protein L9 mRNA, complete cds Length = 694 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 285 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 334 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 532 aacaaggatatcaggaagtttttggacggcatctatgt 569
>gb|BC086937.1| Mus musculus ribosomal protein L9, mRNA (cDNA clone MGC:107692 IMAGE:6787671), complete cds Length = 709 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 282 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 331 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 529 aacaaggatatcaggaagtttttggacggcatctatgt 566
>emb|AL671898.7| Mouse DNA sequence from clone RP23-194K1 on chromosome X, complete sequence Length = 212406 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 102903 gggcttccgatacaagatgcgatctgtgtacgctcacttccccatcaacg 102952 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| || ||||||||||||| Sbjct: 103150 aacaaggatatcaggaagtttttgaacggcatctatgt 103187
>gb|AC154199.2| Mus musculus BAC clone RP24-396N5 from 13, complete sequence Length = 120685 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 50287 aacaaggatatcaggaagtttttggacggcatctatgt 50250 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 50534 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 50485
>gb|AC154506.4| Mus musculus BAC clone RP24-94N16 from chromosome 13, complete sequence Length = 164500 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 13491 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 13442
>emb|CT025645.16| Mouse DNA sequence from clone RP23-233D21 on chromosome 13, complete sequence Length = 225179 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 50319 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 50368 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 50566 aacaaggatatcaggaagtttttggacggcatctatgt 50603
>gb|AC164120.2| Mus musculus BAC clone RP24-289J17 from chromosome 14, complete sequence Length = 147050 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 8717 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 8766 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 8964 aacaaggatatcaggaagtttttggacggcatctatgt 9001
>gb|U17332.1|MMU17332 Mus musculus ribosomal protein L9 (musl9) mRNA, partial cds Length = 519 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 221 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 270 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 468 aacaaggatatcaggaagtttttggacggcatctatgt 505
>gb|U17331.1|MMU17331 Mus musculus mutant ribosomal protein L9 (musl9mu) mRNA, partial cds Length = 519 Score = 52.0 bits (26), Expect = 0.004 Identities = 44/50 (88%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||||| | || ||||| |||||||||||||||| Sbjct: 221 gggcttccgatacaagatgcggtctgtgtacgctcacttccccatcaacg 270 Score = 52.0 bits (26), Expect = 0.004 Identities = 35/38 (92%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||||||||||||||| Sbjct: 468 aacaaggatatcaggaagtttttggacggcatctatgt 505
>ref|XR_009402.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (LOC287551), mRNA Length = 558 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| ||||||||||| |||| ||||||||||| Sbjct: 481 aagaacaaggatatcaggaagtttttggatggcatctatgt 521
>ref|XR_006297.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (LOC287551), mRNA Length = 558 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| ||||||||||| |||| ||||||||||| Sbjct: 481 aagaacaaggatatcaggaagtttttggatggcatctatgt 521
>ref|XR_007929.1| PREDICTED: Rattus norvegicus hypothetical gene supported by X51706 (predicted) (RGD1559948_predicted), mRNA Length = 670 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| ||||||||||| |||| ||||||||||| Sbjct: 501 aagaacaaggatatcaggaagtttttggatggcatctatgt 541
>gb|AF548328.1| Branchiostoma belcheri ribosomal protein L9 mRNA, complete cds Length = 633 Score = 50.1 bits (25), Expect = 0.015 Identities = 43/49 (87%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||| ||||||||||||| | | ||| |||||||| |||||||||||| Sbjct: 255 gggctaccgctacaagatgaggtccgtgtacgcccatttccccatcaac 303 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||||||||||||| | |||||| |||| || ||||| Sbjct: 496 gtgaagaacaaggacatccgcaagttcttggatggaatcta 536
>ref|XM_812671.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L9 (Tc00.1047053509695.170) partial mRNA Length = 570 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||| ||||| ||| | |||||||||||||||||||| Sbjct: 493 gtgaagaaaaaggatatccgcaagttcctggacggcatcta 533 Score = 42.1 bits (21), Expect = 3.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 406 aagatgcgcttcgtctacgcccacttccccatc 438 ||||| ||||||| |||||||||||| |||||| Sbjct: 265 aagattcgcttcgcctacgcccactttcccatc 297
>ref|XM_808451.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L9 (Tc00.1047053506835.30) partial mRNA Length = 570 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||| ||||| ||| | |||||||||||||||||||| Sbjct: 493 gtgaagaagaaggatatccgcaagttcctggacggcatcta 533 Score = 44.1 bits (22), Expect = 0.91 Identities = 40/46 (86%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatc 438 ||||||||| | ||||| ||||||| |||||||||||| |||||| Sbjct: 252 gggcttccgttttaagattcgcttcgcctacgcccactttcccatc 297
>ref|XM_801188.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L9 (Tc00.1047053511729.40) partial mRNA Length = 570 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||| ||||| ||| | |||||||||||||||||||| Sbjct: 493 gtgaagaaaaaggatatccgcaagttcctggacggcatcta 533 Score = 42.1 bits (21), Expect = 3.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 406 aagatgcgcttcgtctacgcccacttccccatc 438 ||||| ||||||| |||||||||||| |||||| Sbjct: 265 aagattcgcttcgcctacgcccactttcccatc 297
>ref|XM_799643.1| Trypanosoma cruzi strain CL Brener 60S ribosomal protein L9 (Tc00.1047053504181.10) partial mRNA Length = 570 Score = 50.1 bits (25), Expect = 0.015 Identities = 37/41 (90%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||| ||||| ||| | |||||||||||||||||||| Sbjct: 493 gtgaagaaaaaggatatccgcaagttcctggacggcatcta 533 Score = 44.1 bits (22), Expect = 0.91 Identities = 40/46 (86%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatc 438 ||||||||| | ||||| ||||||| |||||||||||| |||||| Sbjct: 252 gggcttccgttttaagattcgcttcgcctacgcccactttcccatc 297
>emb|AL161517.2|ATCHRIV29 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 29 Length = 199861 Score = 50.1 bits (25), Expect = 0.015 Identities = 52/61 (85%) Strand = Plus / Minus Query: 623 agaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcg 682 ||||||| || |||||||| ||||| ||||||||||| || || || |||||||| |||| Sbjct: 95520 agaaatgtcatgtgaagaagaaggatatcaggaagtttcttgatggtatctatgtgagcg 95461 Query: 683 a 683 | Sbjct: 95460 a 95460
>emb|AL049524.1|ATF7L13 Arabidopsis thaliana DNA chromosome 4, BAC clone F7L13 (ESSA project) Length = 95076 Score = 50.1 bits (25), Expect = 0.015 Identities = 52/61 (85%) Strand = Plus / Minus Query: 623 agaaatgccacgtgaagaacaaggacatcaggaagttcctggacggcatctatgtcagcg 682 ||||||| || |||||||| ||||| ||||||||||| || || || |||||||| |||| Sbjct: 35557 agaaatgtcatgtgaagaagaaggatatcaggaagtttcttgatggtatctatgtgagcg 35498 Query: 683 a 683 | Sbjct: 35497 a 35497
>emb|BX530083.11| Zebrafish DNA sequence from clone DKEY-3L17 in linkage group 10, complete sequence Length = 155046 Score = 50.1 bits (25), Expect = 0.015 Identities = 40/45 (88%) Strand = Plus / Minus Query: 646 gacatcaggaagttcctggacggcatctatgtcagcgacaagggc 690 |||||| ||||||||||||| || || ||||||||||| |||||| Sbjct: 63847 gacatctggaagttcctggatgggatttatgtcagcgagaagggc 63803
>ref|XM_001217120.1| Aspergillus terreus NIH2624 60S ribosomal protein L9-B (ATEG_08535) mRNA, complete cds Length = 579 Score = 48.1 bits (24), Expect = 0.058 Identities = 36/40 (90%) Strand = Plus / Plus Query: 403 tacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 262 tacaagatgcgctacgtgtacgctcactttcccatcaacg 301
>gb|AC161480.9| Mus musculus chromosome 15, clone RP23-404I10, complete sequence Length = 187202 Score = 48.1 bits (24), Expect = 0.058 Identities = 33/36 (91%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctat 675 |||||||| ||||||||||| |||||||||||||| Sbjct: 14270 aacaaggatatcaggaagtttttggacggcatctat 14305
>gb|AC124678.7| Mus musculus chromosome 15, clone RP24-107K17, complete sequence Length = 137248 Score = 48.1 bits (24), Expect = 0.058 Identities = 33/36 (91%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctat 675 |||||||| ||||||||||| |||||||||||||| Sbjct: 50508 aacaaggatatcaggaagtttttggacggcatctat 50543
>gb|AY130412.1| Petromyzon marinus ribosomal protein L9 mRNA, partial cds Length = 506 Score = 48.1 bits (24), Expect = 0.058 Identities = 39/44 (88%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaa 440 ||||| ||||||||||||| || || ||||||||||||||||| Sbjct: 224 ttccggtacaagatgcgctcggtgtatgcccacttccccatcaa 267
>dbj|AK105332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D01, full insert sequence Length = 649 Score = 48.1 bits (24), Expect = 0.058 Identities = 51/60 (85%) Strand = Plus / Plus Query: 382 ggcgtcaccaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||| |||||||| | ||||||||||| |||||||| || ||||| ||||||||| Sbjct: 281 ggcgtcatcaagggctacaagtacaagatgcgattcgtctatgctcactttcccatcaac 340
>gb|DQ848871.1| Scophthalmus maximus clone kbc94 60S ribosomal protein L9 mRNA, partial cds Length = 493 Score = 46.1 bits (23), Expect = 0.23 Identities = 68/83 (81%) Strand = Plus / Plus Query: 360 ccacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgt 419 ||||||||||||| | |||| || ||||| ||| ||||| ||||| ||||| | ||| Sbjct: 234 ccacgtccagaacatgatcaagggagtcactttgggtttccggtacaaaatgcgttccgt 293 Query: 420 ctacgcccacttccccatcaacg 442 |||||||| ||||||||||||| Sbjct: 294 gtacgcccatttccccatcaacg 316
>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence Length = 214638 Score = 46.1 bits (23), Expect = 0.23 Identities = 23/23 (100%) Strand = Plus / Plus Query: 636 gaagaacaaggacatcaggaagt 658 ||||||||||||||||||||||| Sbjct: 125925 gaagaacaaggacatcaggaagt 125947
>gb|AY522617.1| Oreochromis mossambicus ribosomal protein L9-like mRNA, partial sequence Length = 765 Score = 46.1 bits (23), Expect = 0.23 Identities = 68/83 (81%) Strand = Plus / Plus Query: 360 ccacgtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgt 419 ||||||||||||| | |||| || ||||| ||| ||||| ||||| ||||| | ||| Sbjct: 153 ccacgtccagaacatgatcaagggagtcactttgggtttccggtacaaaatgcgttccgt 212 Query: 420 ctacgcccacttccccatcaacg 442 |||||||| ||||||||||||| Sbjct: 213 gtacgcccatttccccatcaacg 235 Score = 46.1 bits (23), Expect = 0.23 Identities = 53/63 (84%) Strand = Plus / Plus Query: 556 aaggacgagatcgtcctggatggcaatgacattgagcttgtctcccgctctgctgccctg 615 ||||||||| | |||||||| || || ||||||||||| || ||| ||||||||| ||| Sbjct: 349 aaggacgagctggtcctggagggtaacgacattgagctggtgtccaactctgctgctctg 408 Query: 616 atc 618 ||| Sbjct: 409 atc 411
>dbj|AK107388.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-C09, full insert sequence Length = 2566 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Minus Query: 553 gtcaaggacgagatcgtcctggatggcaatgacat 587 ||||||| |||| |||||||||||||||| ||||| Sbjct: 1524 gtcaaggtcgagctcgtcctggatggcaacgacat 1490
>dbj|AP004977.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT12A10, TM0160, complete sequence Length = 74313 Score = 46.1 bits (23), Expect = 0.23 Identities = 32/35 (91%) Strand = Plus / Plus Query: 625 aaatgccacgtgaagaacaaggacatcaggaagtt 659 |||||||| || ||||||||||| ||||||||||| Sbjct: 400 aaatgccatgttaagaacaaggatatcaggaagtt 434
>ref|XM_001179587.1| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein L9 (LOC591874), mRNA Length = 658 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||||||||||||||| ||| |||| ||| |||| Sbjct: 506 aagaacaaggacatcaggaaattcttggatggcgtcta 543
>ref|XM_791421.2| PREDICTED: Strongylocentrotus purpuratus similar to ribosomal protein L9 (LOC591874), mRNA Length = 678 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||||||||||||||| ||| |||| ||| |||| Sbjct: 526 aagaacaaggacatcaggaaattcttggatggcgtcta 563
>ref|XR_020542.1| PREDICTED: Pan troglodytes similar to Ribosomal protein L9 (LOC741312), mRNA Length = 554 Score = 44.1 bits (22), Expect = 0.91 Identities = 43/50 (86%) Strand = Plus / Plus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaacg 442 ||||||||| ||||||||| | | || || ||||||||||||||||||| Sbjct: 123 gggcttccgttacaagatgaggtctgtgtatgcccacttccccatcaacg 172
>ref|XM_001056263.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1559566_predicted), mRNA Length = 706 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 536 aacaaggatatcaggaagtttttggatggcatctatgt 573
>ref|XM_234521.3| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1559566_predicted), mRNA Length = 706 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 536 aacaaggatatcaggaagtttttggatggcatctatgt 573
>ref|XM_001067310.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (predicted) (RGD1561928_predicted), mRNA Length = 715 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||| ||||| |||||||||||||||| Sbjct: 556 aacaaggatatcagtaagtttttggacggcatctatgt 593
>ref|XM_224924.3| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (predicted) (RGD1561928_predicted), mRNA Length = 715 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||| ||||| |||||||||||||||| Sbjct: 556 aacaaggatatcagtaagtttttggacggcatctatgt 593
>ref|XR_008195.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1562134_predicted), mRNA Length = 667 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 501 aacaaggatatcaggaagtttttggatggcatctatgt 538
>ref|XR_008557.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1562204_predicted), mRNA Length = 701 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 533 aacaaggatatcaggaagtttttggatggcatctatgt 570
>ref|XM_001074676.1| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1561789_predicted), mRNA Length = 707 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 533 aacaaggatatcaggaagtttttggatggcatctatgt 570
>ref|XM_345600.3| PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L9 (predicted) (RGD1561789_predicted), mRNA Length = 707 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 533 aacaaggatatcaggaagtttttggatggcatctatgt 570
>ref|XR_009197.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (LOC295545), mRNA Length = 567 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 493 aacaaggatatcaggaagtttttggacagcatctatgt 530
>ref|XR_005564.1| PREDICTED: Rattus norvegicus similar to ribosomal protein L9 (LOC295545), mRNA Length = 567 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 493 aacaaggatatcaggaagtttttggacagcatctatgt 530
>ref|XR_003389.1| PREDICTED: Mus musculus similar to ribosomal protein L9 (LOC671349), mRNA Length = 706 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||| ||||||||||| |||||||||||||||| Sbjct: 537 aacaaggttatcaggaagtttttggacggcatctatgt 574
>gb|BC086561.1| Rattus norvegicus ribosomal protein L9, mRNA (cDNA clone MGC:105798 IMAGE:7304371), complete cds Length = 705 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 511 aacaaggatatcaggaagtttttggatggcatctatgt 548
>gb|AC158987.3| Mus musculus BAC clone RP23-366K1 from chromosome 9, complete sequence Length = 222125 Score = 44.1 bits (22), Expect = 0.91 Identities = 40/46 (86%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatc 438 ||||||||| ||||||||| | || || ||||| |||||||||||| Sbjct: 28801 gggcttccgttacaagatgaggtttgtatacgctcacttccccatc 28756
>gb|AC125403.4| Mus musculus BAC clone RP23-4E15 from 1, complete sequence Length = 126790 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||| ||||||||||| |||||||||||||||| Sbjct: 51854 aacaaggttatcaggaagtttttggacggcatctatgt 51817 Score = 42.1 bits (21), Expect = 3.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||| ||||||||||| | || |||| ||||||||||||||| Sbjct: 52101 gggcttccgatacaagatgcggtctgtggacgctcacttccccatcaac 52053
>gb|AC112147.5| Mus musculus BAC clone RP23-175E16 from 9, complete sequence Length = 202928 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||| |||||| |||| ||||||||||| Sbjct: 97319 aacaaggatatcagtaagttcttggatggcatctatgt 97356
>emb|X51706.1|RRRPL9 Rat mRNA for ribosomal protein L9 Length = 671 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 511 aacaaggatatcaggaagtttttggatggcatctatgt 548
>emb|AJ843878.1| Platichthys flesus mRNA for 60S ribosomal protein L9 (rpl9 gene) Length = 769 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 556 aaggacgagatcgtcctggatggcaatgacattgagct 593 ||||||||| | ||||||| ||||||||||||||||| Sbjct: 432 aaggacgagctgatcctggaaggcaatgacattgagct 469
>emb|AJ421478.1| Mus musculus X-inactivation center region; segment 1/3 Length = 247850 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 238869 aacaaggatatcaggaagtttttggatggcatctatgt 238832
>dbj|AK204218.1| Mus musculus cDNA, clone:Y1G0147K13, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000063797, based on BLAT search Length = 308 Score = 44.1 bits (22), Expect = 0.91 Identities = 31/34 (91%) Strand = Plus / Plus Query: 644 aggacatcaggaagttcctggacggcatctatgt 677 |||| ||||||||||| |||||||||||||||| Sbjct: 139 aggatatcaggaagtttttggacggcatctatgt 172
>gb|AY130413.1| Scyliorhinus canicula ribosomal protein L9-like mRNA, partial sequence Length = 501 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 580 aatgacattgagcttgtctcccgctctgctgccctgat 617 |||||||||||||| || ||| ||||||||||||||| Sbjct: 404 aatgacattgagctggtatccaactctgctgccctgat 441
>gb|AF391091.1| Spodoptera frugiperda ribosomal protein L9 mRNA, complete cds Length = 737 Score = 44.1 bits (22), Expect = 0.91 Identities = 46/54 (85%) Strand = Plus / Plus Query: 388 accaagggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 |||||||| |||| ||||| ||||| | ||| |||||||| |||||||||||| Sbjct: 363 accaagggattccagtacaaaatgcgttccgtatacgcccatttccccatcaac 416
>dbj|AK173968.1| Ciona intestinalis cDNA, clone:ciad001f19, full insert sequence Length = 638 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatcta 674 ||||||||||||||| | |||||| ||||||| ||||| Sbjct: 510 aagaacaaggacatccgaaagttcttggacggaatcta 547
>ref|XM_960709.1| Neurospora crassa OR74A hypothetical protein (NCU00662.1) partial mRNA Length = 1104 Score = 44.1 bits (22), Expect = 0.91 Identities = 22/22 (100%) Strand = Plus / Plus Query: 547 gagaaggtcaaggacgagatcg 568 |||||||||||||||||||||| Sbjct: 1020 gagaaggtcaaggacgagatcg 1041
>emb|BX813929.1|CNS0AC47 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB48ZD08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 44.1 bits (22), Expect = 0.91 Identities = 28/30 (93%) Strand = Plus / Plus Query: 250 ttcaagcacctcaacctcgacttccagctg 279 |||||||| ||||||||||| ||||||||| Sbjct: 104 ttcaagcatctcaacctcgatttccagctg 133 Score = 44.1 bits (22), Expect = 0.91 Identities = 46/54 (85%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaacgcatccatc 450 ||||| ||||||||| | ||||| |||||||| | ||||||||||| |||||| Sbjct: 263 ttccgttacaagatgaggttcgtgtacgcccatgttcccatcaacgcctccatc 316 Score = 42.1 bits (21), Expect = 3.6 Identities = 58/68 (85%), Gaps = 3/68 (4%) Strand = Plus / Plus Query: 613 ctgatcaaccagaaatgccacgtgaagaacaaggacatca--ggaagttcctggacgg-c 669 ||||| |||||||| || ||||||||||| ||||| |||| ||||||||| ||||| | Sbjct: 482 ctgatgaaccagaagtgtcacgtgaagaagaaggatatcacgcgaagttccttgacggtc 541 Query: 670 atctatgt 677 |||||||| Sbjct: 542 atctatgt 549
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||| ||||||| |||||||||||||||| Sbjct: 207023 aacaaggatatctggaagtttttggacggcatctatgt 207060
>gb|AC133166.2| Mus musculus BAC clone RP24-186D13 from 1, complete sequence Length = 158206 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Minus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||| ||||||||||| |||||||||||||||| Sbjct: 34780 aacaaggttatcaggaagtttttggacggcatctatgt 34743 Score = 42.1 bits (21), Expect = 3.6 Identities = 42/49 (85%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||| ||||||||||| | || |||| ||||||||||||||| Sbjct: 35027 gggcttccgatacaagatgcggtctgtggacgctcacttccccatcaac 34979
>emb|AL683845.15| Mouse DNA sequence from clone RP23-423B1 on chromosome X, complete sequence Length = 134201 Score = 44.1 bits (22), Expect = 0.91 Identities = 34/38 (89%) Strand = Plus / Plus Query: 640 aacaaggacatcaggaagttcctggacggcatctatgt 677 |||||||| ||||||||||| |||| ||||||||||| Sbjct: 64688 aacaaggatatcaggaagtttttggatggcatctatgt 64725
>gb|AC138587.11| Mus musculus chromosome 9, clone RP24-160H16, complete sequence Length = 185915 Score = 44.1 bits (22), Expect = 0.91 Identities = 40/46 (86%) Strand = Plus / Minus Query: 393 gggcttccgctacaagatgcgcttcgtctacgcccacttccccatc 438 ||||||||| ||||||||| | || || ||||| |||||||||||| Sbjct: 172722 gggcttccgttacaagatgaggtttgtatacgctcacttccccatc 172677
>ref|XR_002731.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L9 (LOC435256), mRNA Length = 577 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 649 atcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||||||||||| Sbjct: 512 atcaggaagtttttggacggcatctatgt 540
>ref|XR_001972.1| PREDICTED: Mus musculus similar to 60S ribosomal protein L9 (LOC435256), mRNA Length = 577 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 649 atcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||||||||||| Sbjct: 512 atcaggaagtttttggacggcatctatgt 540
>ref|XM_001000482.1| PREDICTED: Mus musculus RIKEN cDNA 4930401B11 gene (4930401B11Rik), mRNA Length = 1421 Score = 42.1 bits (21), Expect = 3.6 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 395 gcttccgctacaagatgcgct-tcgtctacgcccacttccccatcaacg 442 ||||||| ||||||||||| | |||| || || |||||||||||||||| Sbjct: 1106 gcttccgttacaagatgcggtctcgtgtatgctcacttccccatcaacg 1154
>ref|XM_993539.1| PREDICTED: Mus musculus RIKEN cDNA 4930401B11 gene (4930401B11Rik), mRNA Length = 1421 Score = 42.1 bits (21), Expect = 3.6 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 395 gcttccgctacaagatgcgct-tcgtctacgcccacttccccatcaacg 442 ||||||| ||||||||||| | |||| || || |||||||||||||||| Sbjct: 1106 gcttccgttacaagatgcggtctcgtgtatgctcacttccccatcaacg 1154
>ref|XM_986150.1| PREDICTED: Mus musculus RIKEN cDNA 4930401B11 gene (4930401B11Rik), mRNA Length = 1421 Score = 42.1 bits (21), Expect = 3.6 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Plus Query: 395 gcttccgctacaagatgcgct-tcgtctacgcccacttccccatcaacg 442 ||||||| ||||||||||| | |||| || || |||||||||||||||| Sbjct: 1106 gcttccgttacaagatgcggtctcgtgtatgctcacttccccatcaacg 1154
>gb|DQ214109.1| Taeniopygia guttata clone 0058P0056F08 ribosomal protein L9-like mRNA, complete sequence Length = 783 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 577 aagaacaaggatatcaggaaattcttggatggtatctatgt 617
>gb|DQ214108.1| Taeniopygia guttata clone 0058P0018B08 ribosomal protein L9-like mRNA, complete sequence Length = 1025 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 811 aagaacaaggatatcaggaaattcttggatggtatctatgt 851
>gb|DQ214107.1| Taeniopygia guttata clone 0061P0006A08 ribosomal protein L9-like mRNA, complete sequence Length = 735 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 529 aagaacaaggatatcaggaaattcttggatggtatctatgt 569
>gb|DQ214106.1| Taeniopygia guttata clone 0061P0015B05 ribosomal protein L9-like mRNA, complete sequence Length = 737 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 529 aagaacaaggatatcaggaaattcttggatggtatctatgt 569
>gb|DQ214105.1| Taeniopygia guttata clone 0058P0059H09 ribosomal protein L9-like mRNA, complete sequence Length = 735 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 529 aagaacaaggatatcaggaaattcttggatggtatctatgt 569
>gb|DQ214104.1| Taeniopygia guttata clone 0061P0008H06 ribosomal protein L9-like mRNA, complete sequence Length = 732 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 637 aagaacaaggacatcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||| ||| |||| || |||||||| Sbjct: 518 aagaacaaggatatcaggaaattcttggatggtatctatgt 558
>ref|XM_677359.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9182.2), mRNA Length = 3150 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 574 gatggcaatgacattgagcttgtct 598 ||||||||||||| ||||||||||| Sbjct: 1387 gatggcaatgacaatgagcttgtct 1363
>ref|XM_817275.1| Trypanosoma brucei TREU927 60S ribosomal protein L9 (Tb10.70.7010) partial mRNA Length = 570 Score = 42.1 bits (21), Expect = 3.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 634 gtgaagaacaaggacatcaggaagttcctggacggcatcta 674 |||||||| ||||| ||| | |||||| ||||||||||||| Sbjct: 493 gtgaagaagaaggatatccgtaagttcttggacggcatcta 533
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 gcaccatggccgccatccgca 349 ||||||||||||||||||||| Sbjct: 776361 gcaccatggccgccatccgca 776381
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 545 ccgagaaggtcaaggacgaga 565 ||||||||||||||||||||| Sbjct: 3203912 ccgagaaggtcaaggacgaga 3203932
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 gctgcaggatggcggccggaa 296 ||||||||||||||||||||| Sbjct: 3446915 gctgcaggatggcggccggaa 3446935
>emb|AL669948.8| Mouse DNA sequence from clone RP23-248K2 on chromosome 11, complete sequence Length = 223030 Score = 42.1 bits (21), Expect = 3.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 649 atcaggaagttcctggacggcatctatgt 677 ||||||||||| |||||||||||||||| Sbjct: 138432 atcaggaagtttttggacggcatctatgt 138460
>emb|AM049015.1| Meladema coriacea mRNA for ribosomal protein L9e (rpL9e gene) Length = 570 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 468 catcgagatcaggaacttcct 488 ||||||||||||||||||||| Sbjct: 327 catcgagatcaggaacttcct 347
>emb|CR713603.2|CNS0GDKF Tetraodon nigroviridis full-length cDNA Length = 505 Score = 42.1 bits (21), Expect = 3.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaa 440 |||| ||||| ||||| ||||||| ||| || ||||| ||||||||||| Sbjct: 33 agggtttccggtacaaaatgcgctccgtgtatgcccatttccccatcaa 81
>emb|CR710996.2|CNS0GBK0 Tetraodon nigroviridis full-length cDNA Length = 525 Score = 42.1 bits (21), Expect = 3.6 Identities = 42/49 (85%) Strand = Plus / Plus Query: 392 agggcttccgctacaagatgcgcttcgtctacgcccacttccccatcaa 440 |||| ||||| ||||| ||||||| ||| || ||||| ||||||||||| Sbjct: 53 agggtttccggtacaaaatgcgctccgtgtatgcccatttccccatcaa 101
>emb|CR631589.2|CNS0EMAZ Tetraodon nigroviridis full-length cDNA Length = 731 Score = 42.1 bits (21), Expect = 3.6 Identities = 63/77 (81%) Strand = Plus / Plus Query: 364 gtccagaacctcatcaccggcgtcaccaagggcttccgctacaagatgcgcttcgtctac 423 ||||||||| | |||| || |||||| ||| ||||| ||||| ||||||| ||| || Sbjct: 232 gtccagaacatgatcaagggagtcaccttgggtttccggtacaaaatgcgctccgtgtat 291 Query: 424 gcccacttccccatcaa 440 ||||| ||||||||||| Sbjct: 292 gcccatttccccatcaa 308
>ref|NM_001022689.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC613.06), partial mRNA Length = 570 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||||||||||| | ||||| || ||||| ||||||||| Sbjct: 256 ttccgctacaagatgcgtcttgtctatgctcactttcccatcaac 300
>emb|AL031644.1|SPCC613 S.pombe chromosome III cosmid c613 Length = 28999 Score = 42.1 bits (21), Expect = 3.6 Identities = 39/45 (86%) Strand = Plus / Plus Query: 397 ttccgctacaagatgcgcttcgtctacgcccacttccccatcaac 441 ||||||||||||||||| | ||||| || ||||| ||||||||| Sbjct: 10235 ttccgctacaagatgcgtcttgtctatgctcactttcccatcaac 10279
>emb|CR932039.2| Medicago truncatula chromosome 5 clone mth2-6h11, COMPLETE SEQUENCE Length = 132508 Score = 42.1 bits (21), Expect = 3.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 580 aatgacattgagcttgtctcc 600 ||||||||||||||||||||| Sbjct: 102371 aatgacattgagcttgtctcc 102351
>ref|XM_309298.2| Anopheles gambiae str. PEST ENSANGP00000018425 (ENSANGG00000015936), partial mRNA Length = 2034 Score = 42.1 bits (21), Expect = 3.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 641 acaaggacatcaggaagttcctgga 665 |||||||||||| |||||||||||| Sbjct: 371 acaaggacatcaagaagttcctgga 395
>emb|AL928604.9| Mouse DNA sequence from clone RP23-220K22 on chromosome 2, complete sequence Length = 181572 Score = 42.1 bits (21), Expect = 3.6 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 395 gcttccgctacaagatgcgct-tcgtctacgcccacttccccatcaacg 442 ||||||| ||||||||||| | |||| || || |||||||||||||||| Sbjct: 130242 gcttccgttacaagatgcggtctcgtgtatgctcacttccccatcaacg 130194 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 122,468,085 Number of extensions: 6184964 Number of successful extensions: 122242 Number of sequences better than 10.0: 217 Number of HSP's gapped: 122217 Number of HSP's successfully gapped: 359 Length of query: 955 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 932 Effective length of database: 18,503,978,556 Effective search space: 17245708014192 Effective search space used: 17245708014192 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
