Clone Name | FLbaf92h11 |
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Clone Library Name | barley_pub |
>ref|NM_001062458.1| Oryza sativa (japonica cultivar-group) Os05g0494100 (Os05g0494100) mRNA, complete cds Length = 1209 Score = 383 bits (193), Expect = e-102 Identities = 391/457 (85%) Strand = Plus / Plus Query: 93 cgccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgca 152 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 110 cgccatgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgca 169 Query: 153 agcagatgaagatgttggcaagattgctctagctgtacctgttcttgtgtccaaagcgtt 212 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 170 agcagatgaagatgttggcaagattgctttagctgtacctgttctagtgtcaaaagcatt 229 Query: 213 ggagctatttttgcaagacttgtgtgataggacatataatatcacaattgaaaaaggggt 272 ||| ||||| |||||||||||||| ||||||||||| | || ||| | ||| |||||| Sbjct: 230 ggaattatttctgcaagacttgtgtaataggacatatgacattacagtgcaaagaggggt 289 Query: 273 caaaacagtgagttcatcgcatttgaaacagtgcattcatagttatgatgtgtatgattt 332 ||| || ||||||| || ||||||||||||||||| ||||||||| |||| || ||||| Sbjct: 290 caagactctgagttcttcccatttgaaacagtgcatacatagttataatgtttacgattt 349 Query: 333 tttgaagaacgtagccagcaaagtcccagatttgggtgcacctgattctaatgctgatga 392 |||| | | || | ||| ||||| ||||| ||||| || ||||| || || |||||| Sbjct: 350 cttgagggatgtcgtcagtaaagttccagacatgggtacatctgatgctggtgttgatga 409 Query: 393 taagcttggcaaaagaaggaaacatggtgaagatgaaagcgaggaggaaacaaagcggac 452 ||| ||||||||||| |||||| || ||||||||| || || |||||| |||||||||| Sbjct: 410 taaacttggcaaaaggaggaaaactgctgaagatgacagtgaagaggaatcaaagcggac 469 Query: 453 aagaaatgaggcagcatgccacacaagcaacggcagagggcgtgggaggggacgcgggag 512 |||||||||||||||| |||| ||||||| || ||||||||||||||||| || || || Sbjct: 470 aagaaatgaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaag 529 Query: 513 aggtcgccgtgccgggcgtggagctgagagggagatt 549 ||| || |||| ||||||| |||||||||||||| Sbjct: 530 aggccgacgtggtgggcgtgtgtctgagagggagatt 566 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 837 tggcaactgcctgagatgaacaagatggccttggatccggtccagtttgcgctgtcgtca 896 |||||| |||||||| ||| |||||||||| |||| || || |||||||| |||| ||| Sbjct: 882 tggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttca 941 Query: 897 aaccatagattagaggagga 916 |||||||| ||||||||||| Sbjct: 942 aaccataggttagaggagga 961 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 673 taaggaacattgacttgaacttagatcttgctgactatga 712 |||||||||||||||| ||| |||| ||| |||||||||| Sbjct: 718 taaggaacattgacttaaacatagagcttactgactatga 757
>dbj|AK068320.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150F08, full insert sequence Length = 1210 Score = 383 bits (193), Expect = e-102 Identities = 391/457 (85%) Strand = Plus / Plus Query: 93 cgccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgca 152 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 111 cgccatgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgca 170 Query: 153 agcagatgaagatgttggcaagattgctctagctgtacctgttcttgtgtccaaagcgtt 212 |||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||| || Sbjct: 171 agcagatgaagatgttggcaagattgctttagctgtacctgttctagtgtcaaaagcatt 230 Query: 213 ggagctatttttgcaagacttgtgtgataggacatataatatcacaattgaaaaaggggt 272 ||| ||||| |||||||||||||| ||||||||||| | || ||| | ||| |||||| Sbjct: 231 ggaattatttctgcaagacttgtgtaataggacatatgacattacagtgcaaagaggggt 290 Query: 273 caaaacagtgagttcatcgcatttgaaacagtgcattcatagttatgatgtgtatgattt 332 ||| || ||||||| || ||||||||||||||||| ||||||||| |||| || ||||| Sbjct: 291 caagactctgagttcttcccatttgaaacagtgcatacatagttataatgtttacgattt 350 Query: 333 tttgaagaacgtagccagcaaagtcccagatttgggtgcacctgattctaatgctgatga 392 |||| | | || | ||| ||||| ||||| ||||| || ||||| || || |||||| Sbjct: 351 cttgagggatgtcgtcagtaaagttccagacatgggtacatctgatgctggtgttgatga 410 Query: 393 taagcttggcaaaagaaggaaacatggtgaagatgaaagcgaggaggaaacaaagcggac 452 ||| ||||||||||| |||||| || ||||||||| || || |||||| |||||||||| Sbjct: 411 taaacttggcaaaaggaggaaaactgctgaagatgacagtgaagaggaatcaaagcggac 470 Query: 453 aagaaatgaggcagcatgccacacaagcaacggcagagggcgtgggaggggacgcgggag 512 |||||||||||||||| |||| ||||||| || ||||||||||||||||| || || || Sbjct: 471 aagaaatgaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaag 530 Query: 513 aggtcgccgtgccgggcgtggagctgagagggagatt 549 ||| || |||| ||||||| |||||||||||||| Sbjct: 531 aggccgacgtggtgggcgtgtgtctgagagggagatt 567 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 837 tggcaactgcctgagatgaacaagatggccttggatccggtccagtttgcgctgtcgtca 896 |||||| |||||||| ||| |||||||||| |||| || || |||||||| |||| ||| Sbjct: 883 tggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttca 942 Query: 897 aaccatagattagaggagga 916 |||||||| ||||||||||| Sbjct: 943 aaccataggttagaggagga 962 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 673 taaggaacattgacttgaacttagatcttgctgactatga 712 |||||||||||||||| ||| |||| ||| |||||||||| Sbjct: 719 taaggaacattgacttaaacatagagcttactgactatga 758
>emb|CT828754.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI012N01, full insert sequence Length = 502 Score = 186 bits (94), Expect = 1e-43 Identities = 106/110 (96%) Strand = Plus / Plus Query: 93 cgccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgca 152 |||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| Sbjct: 161 cgccatgaggaagaagctggacacccgcttccccgcgcctcggattaagaaaatcatgca 220 Query: 153 agcagatgaagatgttggcaagattgctctagctgtacctgttcttgtgt 202 |||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct: 221 agcagatgaagatgttggcaagattgctttagctgtacctgttctagtgt 270
>gb|AC112160.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1579_G03, complete sequence Length = 121466 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Plus Query: 129 gcctcggattaagaagatcatgcaagcagatgaagatgttggcaagattgctctagctgt 188 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 18445 gcctcggattaagaaaatcatgcaagcagatgaagatgttggcaagattgctttagctgt 18504 Query: 189 acctgttcttgtgt 202 ||||||||| |||| Sbjct: 18505 acctgttctagtgt 18518 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 837 tggcaactgcctgagatgaacaagatggccttggatccggtccagtttgcgctgtcgtca 896 |||||| |||||||| ||| |||||||||| |||| || || |||||||| |||| ||| Sbjct: 21008 tggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttca 21067 Query: 897 aaccatagattagaggagga 916 |||||||| ||||||||||| Sbjct: 21068 aaccataggttagaggagga 21087 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 93 cgccatgaggaagaagctcgacacccgcttccccgcg 129 |||||||||||||||||| |||||||||||||||||| Sbjct: 17122 cgccatgaggaagaagctggacacccgcttccccgcg 17158 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 460 gaggcagcatgccacacaagcaacggcagagggcgtgggaggggacgcgggagaggtcgc 519 ||||||||| |||| ||||||| || ||||||||||||||||| || || ||||| || Sbjct: 20603 gaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaagaggccga 20662 Query: 520 cgtgccgggcgtggagctgagagggagatt 549 |||| ||||||| |||||||||||||| Sbjct: 20663 cgtggtgggcgtgtgtctgagagggagatt 20692 Score = 54.0 bits (27), Expect = 0.001 Identities = 90/111 (81%) Strand = Plus / Plus Query: 297 gaaacagtgcattcatagttatgatgtgtatgattttttgaagaacgtagccagcaaagt 356 |||||||||||| ||||||||| |||| || ||||| |||| | | || | ||| ||||| Sbjct: 20163 gaaacagtgcatacatagttataatgtttacgatttcttgagggatgtcgtcagtaaagt 20222 Query: 357 cccagatttgggtgcacctgattctaatgctgatgataagcttggcaaaag 407 ||||| ||||| || ||||| || || ||||||||| ||||||||||| Sbjct: 20223 tccagacatgggtacatctgatgctggtgttgatgataaacttggcaaaag 20273 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 205 aaagcgttggagctatttttgcaagacttgtgtgataggacatat 249 ||||| ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 19783 aaagcattggaattatttctgcaagacttgtgtaataggacatat 19827 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 420 tgaagatgaaagcgaggaggaaacaaagcggacaagaaatg 460 ||||||||| || || |||||| |||||||||||||||||| Sbjct: 20369 tgaagatgacagtgaagaggaatcaaagcggacaagaaatg 20409 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 673 taaggaacattgacttgaacttagatcttgctgactatga 712 |||||||||||||||| ||| |||| ||| |||||||||| Sbjct: 20844 taaggaacattgacttaaacatagagcttactgactatga 20883
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 123 bits (62), Expect = 2e-24 Identities = 71/74 (95%) Strand = Plus / Plus Query: 129 gcctcggattaagaagatcatgcaagcagatgaagatgttggcaagattgctctagctgt 188 ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 24132206 gcctcggattaagaaaatcatgcaagcagatgaagatgttggcaagattgctttagctgt 24132265 Query: 189 acctgttcttgtgt 202 ||||||||| |||| Sbjct: 24132266 acctgttctagtgt 24132279 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 837 tggcaactgcctgagatgaacaagatggccttggatccggtccagtttgcgctgtcgtca 896 |||||| |||||||| ||| |||||||||| |||| || || |||||||| |||| ||| Sbjct: 24134769 tggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttca 24134828 Query: 897 aaccatagattagaggagga 916 |||||||| ||||||||||| Sbjct: 24134829 aaccataggttagaggagga 24134848 Score = 65.9 bits (33), Expect = 3e-07 Identities = 36/37 (97%) Strand = Plus / Plus Query: 93 cgccatgaggaagaagctcgacacccgcttccccgcg 129 |||||||||||||||||| |||||||||||||||||| Sbjct: 24130883 cgccatgaggaagaagctggacacccgcttccccgcg 24130919 Score = 60.0 bits (30), Expect = 2e-05 Identities = 75/90 (83%) Strand = Plus / Plus Query: 460 gaggcagcatgccacacaagcaacggcagagggcgtgggaggggacgcgggagaggtcgc 519 ||||||||| |||| ||||||| || ||||||||||||||||| || || ||||| || Sbjct: 24134364 gaggcagcaagccagacaagcactggtagagggcgtgggaggggtcggggaagaggccga 24134423 Query: 520 cgtgccgggcgtggagctgagagggagatt 549 |||| ||||||| |||||||||||||| Sbjct: 24134424 cgtggtgggcgtgtgtctgagagggagatt 24134453 Score = 54.0 bits (27), Expect = 0.001 Identities = 90/111 (81%) Strand = Plus / Plus Query: 297 gaaacagtgcattcatagttatgatgtgtatgattttttgaagaacgtagccagcaaagt 356 |||||||||||| ||||||||| |||| || ||||| |||| | | || | ||| ||||| Sbjct: 24133924 gaaacagtgcatacatagttataatgtttacgatttcttgagggatgtcgtcagtaaagt 24133983 Query: 357 cccagatttgggtgcacctgattctaatgctgatgataagcttggcaaaag 407 ||||| ||||| || ||||| || || ||||||||| ||||||||||| Sbjct: 24133984 tccagacatgggtacatctgatgctggtgttgatgataaacttggcaaaag 24134034 Score = 50.1 bits (25), Expect = 0.019 Identities = 40/45 (88%) Strand = Plus / Plus Query: 205 aaagcgttggagctatttttgcaagacttgtgtgataggacatat 249 ||||| ||||| ||||| |||||||||||||| ||||||||||| Sbjct: 24133544 aaagcattggaattatttctgcaagacttgtgtaataggacatat 24133588 Score = 50.1 bits (25), Expect = 0.019 Identities = 37/41 (90%) Strand = Plus / Plus Query: 420 tgaagatgaaagcgaggaggaaacaaagcggacaagaaatg 460 ||||||||| || || |||||| |||||||||||||||||| Sbjct: 24134130 tgaagatgacagtgaagaggaatcaaagcggacaagaaatg 24134170 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 673 taaggaacattgacttgaacttagatcttgctgactatga 712 |||||||||||||||| ||| |||| ||| |||||||||| Sbjct: 24134605 taaggaacattgacttaaacatagagcttactgactatga 24134644
>emb|CT834428.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA106J24, full insert sequence Length = 1587 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 |||||||||||||| | |||||||||||||||| | ||||| || ||||||||||| || Sbjct: 81 atgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcaggct 140 Query: 157 gatgaagatgttggcaagattgctctagctgtacctgtt 195 ||||| || |||||||||||||| ||||||||||||||| Sbjct: 141 gatgaggacgttggcaagattgcactagctgtacctgtt 179
>ref|NM_001074587.1| Oryza sativa (japonica cultivar-group) Os11g0544700 (Os11g0544700) mRNA, complete cds Length = 1046 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 |||||||||||||| | |||||||||||||||| | ||||| || ||||||||||| || Sbjct: 45 atgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcaggct 104 Query: 157 gatgaagatgttggcaagattgctctagctgtacctgtt 195 ||||| || |||||||||||||| ||||||||||||||| Sbjct: 105 gatgaggacgttggcaagattgcactagctgtacctgtt 143
>gb|AF464904.1| Oryza sativa repressor protein (DrAp1) mRNA, complete cds Length = 1024 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 |||||||||||||| | |||||||||||||||| | ||||| || ||||||||||| || Sbjct: 55 atgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcaggct 114 Query: 157 gatgaagatgttggcaagattgctctagctgtacctgtt 195 ||||| || |||||||||||||| ||||||||||||||| Sbjct: 115 gatgaggacgttggcaagattgcactagctgtacctgtt 153
>dbj|AK072844.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143I16, full insert sequence Length = 1049 Score = 109 bits (55), Expect = 2e-20 Identities = 88/99 (88%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 |||||||||||||| | |||||||||||||||| | ||||| || ||||||||||| || Sbjct: 47 atgaggaagaagctgggcacccgcttccccgcggcacggatcaaaaagatcatgcaggct 106 Query: 157 gatgaagatgttggcaagattgctctagctgtacctgtt 195 ||||| || |||||||||||||| ||||||||||||||| Sbjct: 107 gatgaggacgttggcaagattgcactagctgtacctgtt 145
>gb|AF464905.1| Zea mays repressor protein (DrAp1) mRNA, complete cds Length = 1002 Score = 101 bits (51), Expect = 6e-18 Identities = 87/99 (87%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 |||||||||||||||| |||||| ||||||||| |||| || || ||||| ||||||||| Sbjct: 18 atgaggaagaagctcggcacccggttccccgcggctcgaatcaaaaagataatgcaagca 77 Query: 157 gatgaagatgttggcaagattgctctagctgtacctgtt 195 ||||| |||||||| |||||||| ||||| || |||||| Sbjct: 78 gatgaggatgttggaaagattgcactagcagttcctgtt 116
>gb|BT009305.1| Triticum aestivum clone wlm1.pk0016.f3:fis, full insert mRNA sequence Length = 950 Score = 89.7 bits (45), Expect = 2e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 99 gaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagcaga 158 |||||||||||| | |||||| ||||||||| | ||||| || ||||| ||||||||||| Sbjct: 8 gaggaagaagctgggcacccggttccccgcggcacggatcaaaaagataatgcaagcaga 67 Query: 159 tgaagatgttggcaagattgctctagctgtacctgtt 195 ||| ||||||||||| ||||| || ||||| |||||| Sbjct: 68 tgaggatgttggcaaaattgcactggctgtgcctgtt 104
>gb|BT014143.1| Lycopersicon esculentum clone 133262F, mRNA sequence Length = 1352 Score = 83.8 bits (42), Expect = 1e-12 Identities = 126/154 (81%) Strand = Plus / Plus Query: 96 catgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagc 155 |||||||||||| || || || ||||| || ||| | ||||| ||||| || |||||||| Sbjct: 178 catgaggaagaaacttgatactcgctttcctgcggcccggatcaagaaaattatgcaagc 237 Query: 156 agatgaagatgttggcaagattgctctagctgtacctgttcttgtgtccaaagcgttgga 215 ||||| ||||| || |||||||| | ||||| |||||||| ||||| ||||| ||||| Sbjct: 238 cgatgaggatgtcggtaagattgcaatggctgtgcctgttctagtgtcaaaagccttgga 297 Query: 216 gctatttttgcaagacttgtgtgataggacatat 249 | ||||||| |||||| | ||||| |||||||| Sbjct: 298 gttatttttacaagacctttgtgaccggacatat 331
>ref|NM_112083.2| Arabidopsis thaliana DNA binding / transcription factor (AT3G12480) mRNA, complete cds Length = 1304 Score = 75.8 bits (38), Expect = 3e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 95 ccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaag 154 ||||||||||||||||||| || || ||||| || |||| ||||| ||||| ||||||| Sbjct: 227 ccatgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaag 286 Query: 155 cagatgaagatgttggcaagat 176 | ||||| |||||||||||||| Sbjct: 287 ctgatgaggatgttggcaagat 308
>gb|AF462841.1|AF462841 Arabidopsis thaliana At3g12480/MQC3.32 mRNA, complete cds Length = 1258 Score = 75.8 bits (38), Expect = 3e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 95 ccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaag 154 ||||||||||||||||||| || || ||||| || |||| ||||| ||||| ||||||| Sbjct: 227 ccatgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaag 286 Query: 155 cagatgaagatgttggcaagat 176 | ||||| |||||||||||||| Sbjct: 287 ctgatgaggatgttggcaagat 308
>emb|BX842121.1|CNS09YDH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB81ZE12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1116 Score = 75.8 bits (38), Expect = 3e-10 Identities = 71/82 (86%) Strand = Plus / Plus Query: 95 ccatgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaag 154 ||||||||||||||||||| || || ||||| || |||| ||||| ||||| ||||||| Sbjct: 226 ccatgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaag 285 Query: 155 cagatgaagatgttggcaagat 176 | ||||| |||||||||||||| Sbjct: 286 ctgatgaggatgttggcaagat 307
>gb|AY109605.1| Zea mays CL181_1 mRNA sequence Length = 1147 Score = 75.8 bits (38), Expect = 3e-10 Identities = 81/97 (83%) Strand = Plus / Plus Query: 99 gaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagcaga 158 |||||||||||||| |||||| ||||||||| |||| || ||| ||||||||||| Sbjct: 111 gaggaagaagctcggcacccgattccccgcggctcgaatcnnnnngataatgcaagcaga 170 Query: 159 tgaagatgttggcaagattgctctagctgtacctgtt 195 ||| |||||||| |||||||| ||||| || |||||| Sbjct: 171 tgaggatgttggaaagattgcactagcagttcctgtt 207
>gb|AY143847.1| Arabidopsis thaliana At3g12480/MQC3.32 mRNA, complete cds Length = 882 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcgcctcggattaagaagatcatgcaagca 156 ||||||||||||||||| || || ||||| || |||| ||||| ||||| |||||||| Sbjct: 1 atgaggaagaagctcgatactcggttcccagctgctcgtattaaaaagattatgcaagct 60 Query: 157 gatgaagatgttggcaagat 176 ||||| |||||||||||||| Sbjct: 61 gatgaggatgttggcaagat 80
>dbj|AK060192.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-001-E06, full insert sequence Length = 634 Score = 71.9 bits (36), Expect = 5e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 837 tggcaactgcctgagatgaacaagatggccttggatccggtccagtttgcgctgtcgtca 896 |||||| |||||||| ||| |||||||||| |||| || || |||||||| |||| ||| Sbjct: 298 tggcaattgcctgagctgaccaagatggccatggaccctgttcagtttgccttgtcttca 357 Query: 897 aaccatagattagaggagga 916 |||||||| ||||||||||| Sbjct: 358 aaccataggttagaggagga 377 Score = 48.1 bits (24), Expect = 0.075 Identities = 36/40 (90%) Strand = Plus / Plus Query: 673 taaggaacattgacttgaacttagatcttgctgactatga 712 |||||||||||||||| ||| |||| ||| |||||||||| Sbjct: 134 taaggaacattgacttaaacatagagcttactgactatga 173
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 133 cggattaagaagatcatgcaagcagatgaagatgttggcaagattgctctagctgtacct 192 ||||| || ||||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 41613 cggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgtacct 41672 Query: 193 gtt 195 ||| Sbjct: 41673 gtt 41675 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcg 129 |||||||||||||| | |||||||||||||||| Sbjct: 40437 atgaggaagaagctgggcacccgcttccccgcg 40469
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 69.9 bits (35), Expect = 2e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 133 cggattaagaagatcatgcaagcagatgaagatgttggcaagattgctctagctgtacct 192 ||||| || ||||||||||| || ||||| || |||||||||||||| |||||||||||| Sbjct: 19323062 cggatcaaaaagatcatgcaggctgatgaggacgttggcaagattgcactagctgtacct 19323121 Query: 193 gtt 195 ||| Sbjct: 19323122 gtt 19323124 Score = 50.1 bits (25), Expect = 0.019 Identities = 31/33 (93%) Strand = Plus / Plus Query: 97 atgaggaagaagctcgacacccgcttccccgcg 129 |||||||||||||| | |||||||||||||||| Sbjct: 19321886 atgaggaagaagctgggcacccgcttccccgcg 19321918
>gb|DQ275146.1| Boechera stricta At3g12480-like protein, At3g12490-like protein, At3g12500-like protein, At3g12510-like protein, At3g12520-like protein, At3g12530-like protein, At3g12540-like protein, unknown protein, At3g12550-like protein, and At3g12560-like protein genes, complete cds Length = 25412 Score = 60.0 bits (30), Expect = 2e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgttggcaagat 176 |||| ||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 1063 ctcgtattaaaaagattatgcaagctgatgaagatgttggcaagat 1108 Score = 46.1 bits (23), Expect = 0.30 Identities = 29/31 (93%) Strand = Plus / Plus Query: 95 ccatgaggaagaagctcgacacccgcttccc 125 ||||||||||||||||||| || |||||||| Sbjct: 309 ccatgaggaagaagctcgatactcgcttccc 339
>dbj|AP004471.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT15H09, TM0005, complete sequence Length = 97710 Score = 58.0 bits (29), Expect = 8e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgttggcaagattgctctagctgtac 190 ||||||| || ||||| |||||||||||||| |||||||| ||||| || || ||||| | Sbjct: 31265 ctcggataaaaaagataatgcaagcagatgaggatgttggaaagatagccctcgctgtgc 31324 Query: 191 ctgtt 195 ||||| Sbjct: 31325 ctgtt 31329
>gb|AC138452.10| Medicago truncatula clone mth2-17p11, complete sequence Length = 127710 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgttggcaagat 176 ||||||| ||||| || |||||||| |||||||||||||| ||||| Sbjct: 50359 ctcggataaagaaaataatgcaagctgatgaagatgttggaaagat 50314
>gb|AC069474.4|AC069474 Arabidopsis thaliana chromosome 3 BAC T2E22 genomic sequence, complete sequence Length = 105768 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Minus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgttggcaagat 176 |||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 68958 ctcgtattaaaaagattatgcaagctgatgaggatgttggcaagat 68913
>dbj|AP002047.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MQC3 Length = 86536 Score = 52.0 bits (26), Expect = 0.005 Identities = 41/46 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgttggcaagat 176 |||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 72507 ctcgtattaaaaagattatgcaagctgatgaggatgttggcaagat 72552
>gb|AC166642.28| Glycine max clone gmp1-97i15, complete sequence Length = 99138 Score = 48.1 bits (24), Expect = 0.075 Identities = 30/32 (93%) Strand = Plus / Minus Query: 94 gccatgaggaagaagctcgacacccgcttccc 125 |||||||||||||||||||| ||||| ||||| Sbjct: 27384 gccatgaggaagaagctcgatacccgtttccc 27353
>gb|AC152056.19| Glycine max clone gmp1-98f7, complete sequence Length = 122930 Score = 48.1 bits (24), Expect = 0.075 Identities = 30/32 (93%) Strand = Plus / Plus Query: 94 gccatgaggaagaagctcgacacccgcttccc 125 |||||||||||||||||||| ||||| ||||| Sbjct: 115624 gccatgaggaagaagctcgatacccgtttccc 115655
>gb|AC153161.23| Glycine max clone gmw1-77p13, complete sequence Length = 174762 Score = 48.1 bits (24), Expect = 0.075 Identities = 30/32 (93%) Strand = Plus / Plus Query: 94 gccatgaggaagaagctcgacacccgcttccc 125 |||||||||||||||||||| ||||| ||||| Sbjct: 118456 gccatgaggaagaagctcgatacccgtttccc 118487
>ref|NM_121954.1| Arabidopsis thaliana unknown protein (AT5G19490) mRNA, complete cds Length = 711 Score = 48.1 bits (24), Expect = 0.075 Identities = 39/44 (88%) Strand = Plus / Plus Query: 194 ttcttgtgtccaaagcgttggagctatttttgcaagacttgtgt 237 ||||||| || ||||| |||||||| ||||| |||||||||||| Sbjct: 14 ttcttgtttctaaagctttggagctgtttttacaagacttgtgt 57
>gb|AC144537.16| Glycine max clone gmw1-42i18, complete sequence Length = 113397 Score = 48.1 bits (24), Expect = 0.075 Identities = 30/32 (93%) Strand = Plus / Plus Query: 94 gccatgaggaagaagctcgacacccgcttccc 125 |||||||||||||||||||| ||||| ||||| Sbjct: 86088 gccatgaggaagaagctcgatacccgtttccc 86119
>emb|CR954185.2| Medicago truncatula chromosome 5 clone mth4-20m5, COMPLETE SEQUENCE Length = 210708 Score = 46.1 bits (23), Expect = 0.30 Identities = 32/35 (91%) Strand = Plus / Minus Query: 214 gagctatttttgcaagacttgtgtgataggacata 248 ||||||||| ||||||| ||||||||||| ||||| Sbjct: 98411 gagctatttctgcaagatttgtgtgatagaacata 98377
>dbj|AB225283.1| Aspergillus oryzae cDNA, contig sequence: AoEST2135 Length = 1151 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Plus Query: 148 atgcaagcagatgaagatgttggcaag 174 |||||||| |||||||||||||||||| Sbjct: 787 atgcaagccgatgaagatgttggcaag 813
>dbj|AP007157.1| Aspergillus oryzae RIB40 genomic DNA, SC023 Length = 2661830 Score = 46.1 bits (23), Expect = 0.30 Identities = 26/27 (96%) Strand = Plus / Minus Query: 148 atgcaagcagatgaagatgttggcaag 174 |||||||| |||||||||||||||||| Sbjct: 268244 atgcaagccgatgaagatgttggcaag 268218
>gb|M75030.1|CHKNAKATPA Chicken Na+, K+ -ATPase beta-1 subunit gene sequence Length = 4027 Score = 46.1 bits (23), Expect = 0.30 Identities = 23/23 (100%) Strand = Plus / Minus Query: 935 tgaagaatgacggtgactccagc 957 ||||||||||||||||||||||| Sbjct: 1683 tgaagaatgacggtgactccagc 1661
>gb|CP000325.1| Mycobacterium ulcerans Agy99, complete genome Length = 5631606 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 72 cctccggcgccgccggctccgc 93 |||||||||||||||||||||| Sbjct: 1492357 cctccggcgccgccggctccgc 1492378
>emb|CR855170.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818E04, complete sequence Length = 146307 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 gacgcgggagaggtcgccgtgc 524 |||||||||||||||||||||| Sbjct: 64658 gacgcgggagaggtcgccgtgc 64637
>ref|NM_001059468.1| Oryza sativa (japonica cultivar-group) Os04g0449800 (Os04g0449800) mRNA, complete cds Length = 954 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 gacgcgggagaggtcgccgtgc 524 |||||||||||||||||||||| Sbjct: 468 gacgcgggagaggtcgccgtgc 447
>ref|XM_001090223.1| PREDICTED: Macaca mulatta phosphatase and actin regulator 1, transcript variant 2 (PHACTR1), mRNA Length = 2025 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgaca 933 ||||||||||||||||||| |||||| Sbjct: 1770 agaggaggaggacgaagacgatgaca 1795
>ref|XM_001090110.1| PREDICTED: Macaca mulatta phosphatase and actin regulator 1, transcript variant 1 (PHACTR1), mRNA Length = 2534 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgaca 933 ||||||||||||||||||| |||||| Sbjct: 1860 agaggaggaggacgaagacgatgaca 1885
>ref|XM_001090449.1| PREDICTED: Macaca mulatta phosphatase and actin regulator 1, transcript variant 3 (PHACTR1), mRNA Length = 4998 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgaca 933 ||||||||||||||||||| |||||| Sbjct: 1563 agaggaggaggacgaagacgatgaca 1588
>ref|XM_001090915.1| PREDICTED: Macaca mulatta phosphatase and actin regulator 1, transcript variant 5 (PHACTR1), mRNA Length = 2697 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgaca 933 ||||||||||||||||||| |||||| Sbjct: 1563 agaggaggaggacgaagacgatgaca 1588
>ref|XM_001090802.1| PREDICTED: Macaca mulatta phosphatase and actin regulator 1, transcript variant 4 (PHACTR1), mRNA Length = 2904 Score = 44.1 bits (22), Expect = 1.2 Identities = 25/26 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgaca 933 ||||||||||||||||||| |||||| Sbjct: 1770 agaggaggaggacgaagacgatgaca 1795
>gb|AE009339.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 109 of 187 of the complete sequence Length = 11199 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 25 cgccgatccgacctccagccgc 46 |||||||||||||||||||||| Sbjct: 3755 cgccgatccgacctccagccgc 3734
>gb|AE008276.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 80 of 187 of the complete sequence Length = 9389 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 cgccgatccgacctccagccgc 46 |||||||||||||||||||||| Sbjct: 5635 cgccgatccgacctccagccgc 5656
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 179 ctctagctgtacctgttcttgt 200 |||||||||||||||||||||| Sbjct: 2852704 ctctagctgtacctgttcttgt 2852725
>ref|XM_533232.2| PREDICTED: Canis familiaris hypothetical LOC476023 (LOC476023), mRNA Length = 2846 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 75 ccggcgccgccggctccgcgcc 96 |||||||||||||||||||||| Sbjct: 41 ccggcgccgccggctccgcgcc 62
>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 99727 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 tatgatgtgtatgattttttga 337 |||||||||||||||||||||| Sbjct: 57586 tatgatgtgtatgattttttga 57607
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 gacgcgggagaggtcgccgtgc 524 |||||||||||||||||||||| Sbjct: 22387020 gacgcgggagaggtcgccgtgc 22386999 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 aaagaagtggagaccaaggatctcc 831 |||||||||||||| |||||||||| Sbjct: 16182622 aaagaagtggagacaaaggatctcc 16182598
>gb|AF033856.1|AF033856 Agrobacterium tumefaciens glycogen operon, complete sequence Length = 9386 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Plus Query: 25 cgccgatccgacctccagccgc 46 |||||||||||||||||||||| Sbjct: 5689 cgccgatccgacctccagccgc 5710
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 44.1 bits (22), Expect = 1.2 Identities = 22/22 (100%) Strand = Plus / Minus Query: 503 gacgcgggagaggtcgccgtgc 524 |||||||||||||||||||||| Sbjct: 137924 gacgcgggagaggtcgccgtgc 137903
>gb|AC189008.3| Gallus gallus BAC clone CH261-78K9 from chromosome z, complete sequence Length = 222613 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 118 cgcttccccgcgcctcggatt 138 ||||||||||||||||||||| Sbjct: 122814 cgcttccccgcgcctcggatt 122794
>ref|XM_417790.2| PREDICTED: Gallus gallus nuclear transcription factor Y, gamma, transcript variant 3 (NFYC), mRNA Length = 1827 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||||||||||||||| ||| || |||||||||||| Sbjct: 145 ctcggattaagaagataatgaaactagatgaagatgt 181
>ref|XM_001233265.1| PREDICTED: Gallus gallus nuclear transcription factor Y, gamma, transcript variant 2 (NFYC), mRNA Length = 1770 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||||||||||||||| ||| || |||||||||||| Sbjct: 145 ctcggattaagaagataatgaaactagatgaagatgt 181
>ref|XM_001233250.1| PREDICTED: Gallus gallus nuclear transcription factor Y, gamma, transcript variant 1 (NFYC), mRNA Length = 1565 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||||||||||||||| ||| || |||||||||||| Sbjct: 145 ctcggattaagaagataatgaaactagatgaagatgt 181
>emb|CR855227.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0159H11-OSIGBa0137A07, complete sequence Length = 144811 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 aaagaagtggagaccaaggatctcc 831 |||||||||||||| |||||||||| Sbjct: 95243 aaagaagtggagacaaaggatctcc 95219
>gb|AC192388.1| Gallus gallus BAC clone CH261-25M3 from chromosome z, complete sequence Length = 224340 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 118 cgcttccccgcgcctcggatt 138 ||||||||||||||||||||| Sbjct: 161373 cgcttccccgcgcctcggatt 161393
>gb|DQ390341.1| Phytophthora infestans protein 3.4F-V (3.4F-V) gene, complete cds Length = 7727 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgac 932 |||||| |||||||||||||||||| Sbjct: 5966 agaggacgaggacgaagactatgac 5990
>ref|NM_104496.2| Arabidopsis thaliana HAP5B; DNA binding / transcription factor (HAP5B) mRNA, complete cds Length = 812 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 293 aagaagatcatgaaagctgatgaagatgt 321
>gb|AC168050.2| Mus musculus BAC clone RP23-335J23 from chromosome 18, complete sequence Length = 228033 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 909 gaggaggaggacgaagactatgacaatga 937 ||||||||||| ||||||||||| ||||| Sbjct: 143753 gaggaggaggaggaagactatgataatga 143781
>gb|AC132313.5| Mus musculus BAC clone RP24-298L6 from chromosome 18, complete sequence Length = 157754 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 909 gaggaggaggacgaagactatgacaatga 937 ||||||||||| ||||||||||| ||||| Sbjct: 98566 gaggaggaggaggaagactatgataatga 98538
>gb|AC126421.12| Mus musculus chromosome 1, clone RP23-167H24, complete sequence Length = 218458 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 656 caatgccagggcctccttaaggaac 680 |||||||||||| |||||||||||| Sbjct: 67566 caatgccagggcatccttaaggaac 67542
>gb|AC123855.4| Mus musculus BAC clone RP23-328J17 from chromosome 12, complete sequence Length = 205684 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 tggcaaaagaaggaaacatggtgaa 423 ||||||||||||| ||||||||||| Sbjct: 31719 tggcaaaagaagggaacatggtgaa 31695
>gb|AC009894.2| Arabidopsis thaliana chromosome I BAC T6H22 genomic sequence, complete sequence Length = 96489 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 4411 aagaagatcatgaaagctgatgaagatgt 4383
>gb|AY114704.1| Arabidopsis thaliana putative transcription factor (At1g56170) mRNA, complete cds Length = 731 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 247 aagaagatcatgaaagctgatgaagatgt 275
>emb|BX649528.15| Zebrafish DNA sequence from clone DKEY-19F4 in linkage group 5, complete sequence Length = 205281 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 tgaaaaaggggtcaaaacagt 281 ||||||||||||||||||||| Sbjct: 115922 tgaaaaaggggtcaaaacagt 115902
>emb|CR719044.2|CNS0GHRE Tetraodon nigroviridis full-length cDNA Length = 698 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 650 tttgagcaatgccagggcctc 670 ||||||||||||||||||||| Sbjct: 351 tttgagcaatgccagggcctc 331
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gatgcccccgccttcgtcccc 22 ||||||||||||||||||||| Sbjct: 2095342 gatgcccccgccttcgtcccc 2095322
>gb|AY072411.1| Arabidopsis thaliana transcription factor, putative (At1g56170) mRNA, complete cds Length = 812 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 293 aagaagatcatgaaagctgatgaagatgt 321
>emb|Y13725.1|ATHAP5B Arabidopsis thaliana mRNA for Hap5b transcription factor Length = 584 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 73 aagaagatcatgaaagctgatgaagatgt 101
>gb|AY086605.1| Arabidopsis thaliana clone 26157 mRNA, complete sequence Length = 768 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 294 aagaagatcatgaaagctgatgaagatgt 322
>emb|CR380950.1| Candida glabrata strain CBS138 chromosome D complete sequence Length = 651701 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgacaatgaaga 940 ||||||||||||||||||| | || |||||||| Sbjct: 241164 agaggaggaggacgaagacgaagataatgaaga 241196
>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20, complete sequence Length = 145825 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 aaagaagtggagaccaaggatctcc 831 |||||||||||||| |||||||||| Sbjct: 143372 aaagaagtggagacaaaggatctcc 143348
>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence, complete sequence Length = 111481 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 82854 aagaagatcatgaaagctgatgaagatgt 82826
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 414 acatggtgaagatgaaagcga 434 ||||||||||||||||||||| Sbjct: 6695612 acatggtgaagatgaaagcga 6695592
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gatgcccccgccttcgtcccc 22 ||||||||||||||||||||| Sbjct: 179639 gatgcccccgccttcgtcccc 179619
>dbj|AB104612.1| Daucus carota C-HAP5A mRNA for CCAAT-box binding factor HAP5 homolog, complete cds Length = 917 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||| ||||||||||| ||| |||| ||||||||||| Sbjct: 291 ctcgcattaagaagataatgaaagctgatgaagatgt 327
>gb|AF296830.1|T20D1 Arabidopsis thaliana BAC T20D1 Length = 35369 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 205 aaagcgttggagctatttttgcaagacttgtgt 237 ||||| |||||||| ||||| |||||||||||| Sbjct: 2006 aaagctttggagctgtttttacaagacttgtgt 1974
>emb|CR406160.1| Gallus gallus finished cDNA, clone ChEST846n1 Length = 1255 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||||||||||||||| ||| || |||||||||||| Sbjct: 430 ctcggattaagaagataatgaaactagatgaagatgt 466
>emb|BX817882.1|CNS0AE5O Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL47ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 734 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 231 aagaagatcatgaaagctgatgaagatgt 259
>emb|BX841972.1|CNS09Y47 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL76ZF01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 771 Score = 42.1 bits (21), Expect = 4.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 139 aagaagatcatgcaagcagatgaagatgt 167 |||||||||||| |||| ||||||||||| Sbjct: 270 aagaagatcatgaaagctgatgaagatgt 298
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 gatgcccccgccttcgtcccc 22 ||||||||||||||||||||| Sbjct: 51135 gatgcccccgccttcgtcccc 51115
>ref|XM_445516.1| Candida glabrata CBS138, CAGL0D02332g partial mRNA Length = 2532 Score = 42.1 bits (21), Expect = 4.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 908 agaggaggaggacgaagactatgacaatgaaga 940 ||||||||||||||||||| | || |||||||| Sbjct: 1455 agaggaggaggacgaagacgaagataatgaaga 1487
>emb|BX930411.1| Gallus gallus finished cDNA, clone ChEST619l20 Length = 590 Score = 42.1 bits (21), Expect = 4.6 Identities = 33/37 (89%) Strand = Plus / Plus Query: 131 ctcggattaagaagatcatgcaagcagatgaagatgt 167 |||||||||||||||| ||| || |||||||||||| Sbjct: 239 ctcggattaagaagataatgaaactagatgaagatgt 275
>gb|AC157571.6| Mus musculus BAC clone RP23-111F7 from chromosome 12, complete sequence Length = 208117 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 399 tggcaaaagaaggaaacatggtgaa 423 ||||||||||||| ||||||||||| Sbjct: 198997 tggcaaaagaagggaacatggtgaa 198973
>emb|BX324144.4| Pig DNA sequence from clone XX-1044B7, complete sequence Length = 124310 Score = 42.1 bits (21), Expect = 4.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 75 ccggcgccgccggctccgcgc 95 ||||||||||||||||||||| Sbjct: 16738 ccggcgccgccggctccgcgc 16758
>emb|AL606729.3|OSJN00107 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0062B06, complete sequence Length = 187154 Score = 42.1 bits (21), Expect = 4.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 807 aaagaagtggagaccaaggatctcc 831 |||||||||||||| |||||||||| Sbjct: 27539 aaagaagtggagacaaaggatctcc 27515 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 211,532,517 Number of extensions: 12208471 Number of successful extensions: 225846 Number of sequences better than 10.0: 86 Number of HSP's gapped: 225846 Number of HSP's successfully gapped: 109 Length of query: 1218 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1195 Effective length of database: 18,503,978,556 Effective search space: 22112254374420 Effective search space used: 22112254374420 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)