ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf89f20 |
|---|---|
| Clone Library Name | barley_pub |
>LOC_Os06g01210:12006.t00021:unspliced-genomic plastocyanin, chloroplast precursor, putative, expressed| Length = 860 Score = 231 bits (499), Expect(2) = 1e-61 Identities = 94/98 (95%), Positives = 98/98 (100%) Frame = +2 / +2 Query: 260 QDVLLGANGGVLVFEPNDFSVKAGETITFKNNAGYPHNVVFDEDAVPSGVDVSKISQEEY 439 Q+VLLGANGGVLVFEPNDF+VK+GETITFKNNAG+PHNVVFDEDAVPSGVDVSKISQEEY Sbjct: 296 QEVLLGANGGVLVFEPNDFTVKSGETITFKNNAGFPHNVVFDEDAVPSGVDVSKISQEEY 475 Query: 440 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN* 553 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN* Sbjct: 476 LNAPGETFSVTLTVPGTYGFYCEPHAGAGMVGKVTVN* 589 Score = 25.8 bits (50), Expect(2) = 1e-61 Identities = 13/34 (38%), Positives = 16/34 (47%) Frame = +1 / +1 Query: 79 SSHGRPLLCSRVRPFLRRRHPHAQQQKQQDGCAR 180 S HGR LC R PF A++ + G AR Sbjct: 118 SYHGRSFLCRRHHPFHGPLRSRAEEDEIFAGRAR 219 Score = 184 bits (397), Expect = 5e-46 Identities = 83/99 (83%), Positives = 88/99 (88%) Frame = -1 / -3 Query: 555 H*LTVTFPTMPAPAWGSQ*KP*VPGTVRVTEKVSPGALRYSSWEILETSTPEGTASSSNT 376 +*LTVT PT+PAPA GSQ*KP VPGTV VTEKVSPGALRYSS +IL+TSTP GTASSSNT Sbjct: 591 N*LTVTLPTIPAPACGSQ*KPYVPGTVSVTEKVSPGALRYSSCDILDTSTPLGTASSSNT 412 Query: 375 TLCGYPALFLKVMVSPALTLKSLGSNTSTPPLAPRSTSC 259 TL G PALFL VMVSP LT+KS GSNTSTPPLAPRSTSC Sbjct: 411 TL*GKPALFLNVMVSPDLTVKSFGSNTSTPPLAPRSTSC 295 Score = 53.3 bits (110), Expect(2) = 2e-07 Identities = 20/27 (74%), Positives = 24/27 (88%) Frame = -3 / -2 Query: 340 DGLAGLDAEVVGLEHQHAAVGTQEHVL 260 DGLAGLD EVV LEHQHAA+G ++H+L Sbjct: 376 DGLAGLDGEVVRLEHQHAAIGAEKHLL 296 Score = 23.5 bits (45), Expect(2) = 2e-07 Identities = 8/9 (88%), Positives = 9/9 (100%) Frame = -3 / -2 Query: 553 LVDGDLSDH 527 LVDGDL+DH Sbjct: 589 LVDGDLADH 563 Score = 47.8 bits (98), Expect(2) = 1e-05 Identities = 21/30 (70%), Positives = 23/30 (76%) Frame = +1 / +1 Query: 262 GRAPGCQRRRAGVRAQRLQRQGRRDHHLQE 351 G A Q RRAGVRA+RL RQ RRDHH+QE Sbjct: 298 GGASRRQWRRAGVRAERLHRQVRRDHHVQE 387 Score = 23.5 bits (45), Expect(2) = 1e-05 Identities = 8/9 (88%), Positives = 8/9 (88%) Frame = +3 / +3 Query: 528 WSERSPSTN 554 WS RSPSTN Sbjct: 564 WSARSPSTN 590
>LOC_Os12g35180:12012.t03206:unspliced-genomic conserved hypothetical protein| Length = 912 Score = 30.4 bits (60), Expect(2) = 0.17 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = +2 / -2 Query: 470 TLTVPGTYGFYCEPHAGAGMVGK 538 T T PG GF+ EP G G+ G+ Sbjct: 734 TTTAPGVAGFFGEPGGGGGVRGR 666 Score = 26.3 bits (51), Expect(2) = 0.17 Identities = 12/34 (35%), Positives = 15/34 (44%) Frame = +1 / -1 Query: 73 VASSHGRPLLCSRVRPFLRRRHPHAQQQKQQDGC 174 +A++ R VRP RRR PH Q C Sbjct: 870 LAAARDRQPRAPHVRPRRRRRRPHHHVHHDQFAC 769
>LOC_Os03g52010:12003.t04529:unspliced-genomic phosphatidylcholine-sterol acyltransferase precursor, putative,| expressed Length = 2225 Score = 36.3 bits (73), Expect = 0.23 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +1 / -2 Query: 265 RAPGCQRRRAGVRAQRLQRQGRRDHH 342 RA RRRA RAQR Q+ GRR+ H Sbjct: 430 RAAAAARRRAAARAQRGQQHGRREEH 353
>LOC_Os02g12210:12002.t01019:unspliced-genomic hypothetical protein| Length = 2486 Score = 36.3 bits (73), Expect = 0.23 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 / +1 Query: 67 HYVASSHGRPLLCSRVRPFLRRRHP 141 HY +SHGRPL P RRRHP Sbjct: 2263 HYGCNSHGRPLGAGTAGPCRRRRHP 2337
>LOC_Os02g12100:12002.t01008:unspliced-genomic conserved hypothetical protein| Length = 4446 Score = 36.3 bits (73), Expect = 0.23 Identities = 14/25 (56%), Positives = 15/25 (60%) Frame = +1 / -3 Query: 67 HYVASSHGRPLLCSRVRPFLRRRHP 141 HY +SHGRPL P RRRHP Sbjct: 4174 HYGCNSHGRPLGAGTAGPCQRRRHP 4100
>LOC_Os07g09920:12007.t00866:unspliced-genomic disease resistance protein RPM1, putative| Length = 2546 Score = 35.4 bits (71), Expect = 0.43 Identities = 18/64 (28%), Positives = 33/64 (51%) Frame = -1 / -2 Query: 480 TVRVTEKVSPGALRYSSWEILETSTPEGTASSSNTTLCGYPALFLKVMVSPALTLKSLGS 301 ++R+ + +P + SW+ + + G A SSN T CG P+ K + LKS+ + Sbjct: 2425 SLRLVKCSTPSRDLFLSWKYMTRVSSFGMAPSSNRTTCGVPSSGTKDSTLSSGNLKSVRA 2246 Query: 300 NTST 289 +S+ Sbjct: 2245 TSSS 2234
>LOC_Os04g59300:12004.t05388:unspliced-genomic conserved hypothetical protein| Length = 1538 Score = 34.5 bits (69), Expect = 0.81 Identities = 17/44 (38%), Positives = 24/44 (54%) Frame = +1 / +2 Query: 34 LTLG*ASSPPLHYVASSHGRPLLCSRVRPFLRRRHPHAQQQKQQ 165 L L + PPL + P L R RP LR HPHA+++K++ Sbjct: 1202 LALRRRAHPPLLCLPPRSRPPPLRCRDRPTLRHPHPHAKRKKEE 1333
>LOC_Os02g39650:12002.t03602:unspliced-genomic expressed protein| Length = 2818 Score = 34.5 bits (69), Expect = 0.81 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 / -3 Query: 67 HYVASSHGRPLLCSRVRPFLRRRHP 141 HY +SHGRPL P RR+HP Sbjct: 2582 HYGCNSHGRPLGAGTAGPCRRRQHP 2508
>LOC_Os11g27710:12011.t02385:unspliced-genomic hypothetical protein| Length = 1049 Score = 28.1 bits (55), Expect(2) = 0.88 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 / +2 Query: 280 QRRRAGVRAQRLQRQGRRDHHLQE 351 +RRR G R++R +R GRR +E Sbjct: 140 RRRRGGRRSRRAERAGRRSSATEE 211 Score = 26.3 bits (51), Expect(2) = 0.88 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +1 / +2 Query: 523 RHGRKGHRQLMKLPIW 570 RHGR GH Q + +W Sbjct: 344 RHGRTGHHQWRRRDLW 391
>LOC_Os06g01350:12006.t00035:unspliced-genomic transferase, putative, expressed| Length = 1816 Score = 34.1 bits (68), Expect = 1.1 Identities = 18/42 (42%), Positives = 19/42 (45%) Frame = -1 / +3 Query: 390 SSSNTTLCGYPALFLKVMVSPALTLKSLGSNTSTPPLAPRST 265 S T+ C P K SP L S S TS PP PRST Sbjct: 228 SPPGTSPCSPPITSRKASSSPRRRLAS*SSTTSPPPSPPRST 353
>LOC_Os01g48140:12001.t04259:unspliced-genomic conserved hypothetical protein| Length = 4642 Score = 32.2 bits (64), Expect(2) = 1.8 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 / +3 Query: 85 HGRPLLCSRVRPFLRRRHPHAQQQKQ 162 H R L C R P LRRR PH +++ + Sbjct: 513 HHRHLQCPRQGPLLRRRRPHRRRRSR 590 Score = 23.1 bits (44), Expect(2) = 1.8 Identities = 8/14 (57%), Positives = 11/14 (78%) Frame = +3 / +1 Query: 624 IVRYMYVYVFYSTL 665 ++RYM +YVF S L Sbjct: 2644 VLRYMLLYVFLSML 2685
>LOC_Os08g44050:12008.t04130:unspliced-genomic INDETERMINATE-related protein 1, putative, expressed| Length = 6577 Score = 30.9 bits (61), Expect(2) = 1.8 Identities = 13/20 (65%), Positives = 15/20 (75%) Frame = +1 / +2 Query: 274 GCQRRRAGVRAQRLQRQGRR 333 G RRR GVR +RL R+GRR Sbjct: 5963 GRHRRRNGVRRRRLPRRGRR 6022 Score = 24.9 bits (48), Expect(2) = 1.8 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 / +1 Query: 49 ASSPPLHYVASSHGRPLLCSRVRPFLRRR 135 ASSP + A++ RP RP RRR Sbjct: 5623 ASSPGT*WAAAAASRPCTARPTRPSRRRR 5709
>LOC_Os01g47070:12001.t04156:unspliced-genomic acidic endochitinase precursor, putative, expressed| Length = 1265 Score = 33.1 bits (66), Expect = 2.1 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = +1 / -2 Query: 265 RAPGCQRRRAGVRAQRLQRQGR 330 R PGC RRR+G +R +R GR Sbjct: 205 RRPGCPRRRSGPSTRRCRRHGR 140
>LOC_Os01g26980:12001.t02402:unspliced-genomic Transposable element protein, putative, MuDR| Length = 10419 Score = 32.7 bits (65), Expect = 2.9 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 / -1 Query: 579 IAQIGRVVMHASY*LIVRYMYVYVFYSTLLY 671 IA+I ++ H +Y*LI+ Y Y YV ++ LY Sbjct: 2289 IARIYKIKHHMNY*LIITYNYYYVQINSNLY 2197
>LOC_Os01g26856:12001.t02380:unspliced-genomic transposon protein, putative, Mutator sub-class| Length = 10352 Score = 32.7 bits (65), Expect = 2.9 Identities = 14/31 (45%), Positives = 21/31 (67%) Frame = +3 / -2 Query: 579 IAQIGRVVMHASY*LIVRYMYVYVFYSTLLY 671 IA+I ++ H +Y*LI+ Y Y YV ++ LY Sbjct: 2290 IARIYKIKHHMNY*LIITYNYYYVQINSNLY 2198
>LOC_Os12g37070:12012.t03387:unspliced-genomic conserved hypothetical protein| Length = 2429 Score = 32.7 bits (65), Expect = 2.9 Identities = 11/20 (55%), Positives = 17/20 (85%) Frame = +1 / -3 Query: 280 QRRRAGVRAQRLQRQGRRDH 339 +RRR G RA+R++R+ RR+H Sbjct: 81 ERRRGGRRARRVEREARREH 22
>LOC_Os04g43450:12004.t03889:unspliced-genomic hypothetical protein| Length = 1380 Score = 32.7 bits (65), Expect = 2.9 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = -1 / +2 Query: 480 TVRVTEKVSPGALRYSSWEILETSTPEGTASSSNTTLCGYPA 355 T+RVT + S A S W ST G N T C A Sbjct: 806 TMRVTRRSSSAAAELSRWSTTRESTATGRCGCCNPTTCARTA 931
>LOC_Os06g06050:12006.t00491:unspliced-genomic F-box/LRR-repeat MAX2, putative, expressed| Length = 4553 Score = 32.2 bits (64), Expect = 4.0 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = +3 / -3 Query: 573 RLIAQIGRVVMHASY*LIVRYMYVYVFYSTLLYKIDEALRDKKKKK 710 R+IAQ R + Y*LI+R M ++ + + + DE K KK+ Sbjct: 4035 RIIAQFYRKALAEYY*LIIR*MEIHGRHKNICFNSDEEKPGKTKKR 3898
>LOC_Os05g37090:12005.t03253:unspliced-genomic hypothetical protein| Length = 501 Score = 32.2 bits (64), Expect = 4.0 Identities = 8/30 (26%), Positives = 18/30 (60%) Frame = +2 / +1 Query: 344 FKNNAGYPHNVVFDEDAVPSGVDVSKISQE 433 ++ GYPH ++F + + SG+ +S++ Sbjct: 124 YRTQIGYPHRLIFQDTVLKSGIPTDLVSEQ 213
>LOC_Os05g04584:12005.t00354:unspliced-genomic 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase, putative, expressed| Length = 6491 Score = 32.2 bits (64), Expect = 4.0 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +2 / +1 Query: 587 NWTCRHACIILINCTLYVCICFLLY 661 NW RH + + C + CIC L+Y Sbjct: 1360 NWLQRHGML*RVGCMGHACICVLIY 1434
>LOC_Os12g10280:12012.t00905:unspliced-genomic major intrinsic protein, expressed| Length = 3310 Score = 32.2 bits (64), Expect = 4.0 Identities = 14/24 (58%), Positives = 17/24 (70%) Frame = +1 / +2 Query: 265 RAPGCQRRRAGVRAQRLQRQGRRD 336 RAP RRRAG R +R +R+ RRD Sbjct: 824 RAPPALRRRAGPRRRRRRRRRRRD 895
>LOC_Os05g12020:12005.t01032:unspliced-genomic hypothetical protein| Length = 1155 Score = 32.2 bits (64), Expect = 4.0 Identities = 12/30 (40%), Positives = 16/30 (53%) Frame = +1 / -1 Query: 526 HGRKGHRQLMKLPIWVD*SLKLDVSSCMHH 615 +GR G LP W S+K+D+S C H Sbjct: 762 YGRNGSFHAASLPAWNKRSVKIDISPCGQH 673
>LOC_Os03g49770:12003.t04324:unspliced-genomic oxysterol-binding protein 1, putative, expressed| Length = 9227 Score = 32.2 bits (64), Expect = 4.0 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 / -3 Query: 280 QRRRAGVRAQRLQRQGRRDHH 342 +RRR R +R QR+GRR HH Sbjct: 297 RRRRVAPRGRRRQRRGRRRHH 235
>LOC_Os03g43524:12003.t03747:unspliced-genomic hypothetical protein| Length = 871 Score = 32.2 bits (64), Expect = 4.0 Identities = 11/19 (57%), Positives = 14/19 (73%) Frame = +1 / +1 Query: 127 RRRHPHAQQQKQQDGCARF 183 RRR ++QKQ+DGC RF Sbjct: 403 RRRRRKEEEQKQEDGCCRF 459
>LOC_Os03g17150:12003.t01495:unspliced-genomic ZFP16-1, putative, expressed| Length = 932 Score = 26.7 bits (52), Expect(2) = 4.2 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +1 / +1 Query: 88 GRPLLCSRVRPFLRRRHPHAQQQKQQDGCAR 180 GRP + RP RRR ++++Q++G R Sbjct: 454 GRPRAWPQPRPRHRRRRAERRRRRQEEGRGR 546 Score = 22.6 bits (43), Expect(2) = 4.2 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +1 / +1 Query: 280 QRRRAGVRAQRLQRQG 327 +RRRAGVR +R +G Sbjct: 550 RRRRAGVRPERAGDRG 597
>LOC_Os02g11070:12002.t00955:unspliced-genomic fatty acid elongase, putative, expressed| Length = 2883 Score = 29.5 bits (58), Expect(2) = 5.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = +1 / +2 Query: 58 PPLHYVASSHGRPLLCSRVRPFLRRRHPH 144 PPLH RPL+ ++P LRRR H Sbjct: 899 PPLHAHRRRRRRPLVAPPLQPRLRRRLHH 985 Score = 23.5 bits (45), Expect(2) = 5.3 Identities = 11/24 (45%), Positives = 13/24 (54%) Frame = +1 / +2 Query: 262 GRAPGCQRRRAGVRAQRLQRQGRR 333 GR +RRR R R +RQG R Sbjct: 1256 GRGRHVRRRRRPPRQDRRERQGDR 1327
>LOC_Os11g20239:12011.t01793:unspliced-genomic expressed protein| Length = 20374 Score = 31.8 bits (63), Expect = 5.4 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = +2 / +3 Query: 581 RSNWTCRHACIILINCTLYVCICFLLYS 664 R CRH I I + VC+C +LYS Sbjct: 16968 RQRSRCRHVLYIYIYICVCVCVCVVLYS 17051
>LOC_Os10g42660:12010.t03491:unspliced-genomic expressed protein| Length = 2122 Score = 31.8 bits (63), Expect = 5.4 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = +2 / +3 Query: 566 FGSIDRSNWTCRHACIILINCTLYVCICFLL 658 F S+ N C H I+ + +Y+C+CF++ Sbjct: 651 FASVPPINHACNHFLQIIQSNPIYMCVCFVM 743
>LOC_Os08g13520:12008.t01229:unspliced-genomic retrotransposon protein, putative, Ty3-gypsy subclass| Length = 2048 Score = 31.8 bits (63), Expect = 5.4 Identities = 13/24 (54%), Positives = 18/24 (75%) Frame = +3 / -1 Query: 3 ALSILTLFQPLNTWLG*LSSSALR 74 A+ +L F+ L TWL *LS+S+LR Sbjct: 374 AIMVLVWFKMLTTWLA*LSASSLR 303
>LOC_Os12g44320:12012.t04098:unspliced-genomic ATP binding protein, putative, expressed| Length = 2833 Score = 31.8 bits (63), Expect = 5.5 Identities = 19/58 (32%), Positives = 28/58 (48%) Frame = -1 / +2 Query: 441 RYSSWEILETSTPEGTASSSNTTLCGYPALFLKVMVSPALTLKSLGSNTSTPPLAPRS 268 R+S+ +STP ++SS T P+ + P T + S +STPP AP S Sbjct: 113 RHSTSPTSTSSTPTASSSSPATPPSPPPSTTPASTLPPTTTSPASSSPSSTPPPAPPS 286
>LOC_Os10g10410:12010.t00848:unspliced-genomic F-box domain containing protein| Length = 1251 Score = 31.8 bits (63), Expect = 5.5 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 / +3 Query: 58 PPLHYVASSHGRPLLCSRVRPFLRRRHPHAQQQKQQDGCAR 180 PPLH V HG P +RP +R P A++ Q +R Sbjct: 420 PPLHQVRRPHGHPGQLRHLRPRVRPLCPLARRPGHQQRVSR 542
>LOC_Os06g16730:12006.t01546:unspliced-genomic hypothetical protein| Length = 2789 Score = 31.8 bits (63), Expect = 5.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +1 / +2 Query: 58 PPLHYVASSHGRPLLCSRVRPFLR 129 PPLH + HG P R+RP LR Sbjct: 2570 PPLHKIQQPHGHPGQLRRLRPCLR 2641
>LOC_Os05g42290:12005.t03765:unspliced-genomic conserved hypothetical protein| Length = 2244 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/24 (54%), Positives = 15/24 (62%) Frame = +1 / -3 Query: 262 GRAPGCQRRRAGVRAQRLQRQGRR 333 GR+ GC RRR G R +R GRR Sbjct: 196 GRSRGCSRRRPGARRRRRGGGGRR 125
>LOC_Os03g22250:12003.t01977:unspliced-genomic expressed protein| Length = 5017 Score = 31.8 bits (63), Expect = 5.5 Identities = 12/16 (75%), Positives = 12/16 (75%) Frame = +1 / -2 Query: 94 PLLCSRVRPFLRRRHP 141 PLLC R RP LRR HP Sbjct: 912 PLLCCRARPPLRRPHP 865
>LOC_Os01g15770:12001.t01428:unspliced-genomic expressed protein| Length = 2170 Score = 31.8 bits (63), Expect = 5.5 Identities = 13/24 (54%), Positives = 16/24 (66%) Frame = +1 / -1 Query: 262 GRAPGCQRRRAGVRAQRLQRQGRR 333 GR G RRR G R +R +R+GRR Sbjct: 421 GRGGGTSRRRRGRRGRRRRRRGRR 350
>LOC_Os11g32910:12011.t02887:unspliced-genomic expressed protein| Length = 2699 Score = 25.8 bits (50), Expect(2) = 6.9 Identities = 11/22 (50%), Positives = 12/22 (54%) Frame = +2 / +2 Query: 596 CRHACIILINCTLYVCICFLLY 661 CR CII + CTL C L Y Sbjct: 560 CRTDCIIQLLCTLGRCYYSLYY 625 Score = 22.6 bits (43), Expect(2) = 6.9 Identities = 6/19 (31%), Positives = 10/19 (52%) Frame = +1 / +1 Query: 517 WGRHGRKGHRQLMKLPIWV 573 W +HG + H P+W+ Sbjct: 391 WRKHGHEIHELREDPPLWI 447
>LOC_Os11g45950:12011.t04120:unspliced-genomic NAC domain-containing protein 90, putative, expressed| Length = 791 Score = 31.3 bits (62), Expect = 7.5 Identities = 10/20 (50%), Positives = 14/20 (70%) Frame = +2 / -2 Query: 581 RSNWTCRHACIILINCTLYV 640 R N C++ CI++INC YV Sbjct: 697 RGNLGCKNMCILIINCKRYV 638
>LOC_Os09g21130:12009.t01847:unspliced-genomic conserved hypothetical protein| Length = 776 Score = 31.3 bits (62), Expect = 7.5 Identities = 18/44 (40%), Positives = 20/44 (45%) Frame = +1 / -2 Query: 49 ASSPPLHYVASSHGRPLLCSRVRPFLRRRHPHAQQQKQQDGCAR 180 ASS SS G S VRP LR R+ QQ+ GC R Sbjct: 286 ASSRITSVTTSSCGTSTAASVVRPRLRARYRRQLQQRLPPGCRR 155
>LOC_Os07g01410:12007.t00040:unspliced-genomic peroxidase 1 precursor, putative, expressed| Length = 3033 Score = 31.3 bits (62), Expect = 7.5 Identities = 17/61 (27%), Positives = 26/61 (42%) Frame = -1 / +1 Query: 540 TFPTMPAPAWGSQ*KP*VPGTVRVTEKVSPGALRYSSWEILETSTPEGTASSSNTTLCGY 361 T P P + + P T + S G+ R ++W TSTP+ S+ TT + Sbjct: 2251 TAPPSPPASTATPPPTAAPRWTPTTRRRSAGSARSATWTPSSTSTPQPRPPSTPTTTSRW 2430 Query: 360 P 358 P Sbjct: 2431 P 2433
>LOC_Os06g42810:12006.t03972:unspliced-genomic UBA and UBX domain-containing protein, putative, expressed| Length = 4132 Score = 31.3 bits (62), Expect = 7.5 Identities = 14/35 (40%), Positives = 20/35 (57%) Frame = -1 / -2 Query: 393 ASSSNTTLCGYPALFLKVMVSPALTLKSLGSNTST 289 AS T LC P FLK ++ TL+S+ ++ ST Sbjct: 2364 ASLK*TFLCSLPLSFLKDLIRTVFTLRSISNDHST 2260
>LOC_Os01g09260:12001.t00804:unspliced-genomic cytokinin dehydrogenase 1 precursor, putative, expressed| Length = 2479 Score = 31.3 bits (62), Expect = 7.5 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = +1 / +3 Query: 271 PGCQRRRAGVRAQRLQRQGRRDHHL 345 PG RRR G A+RL+R G H L Sbjct: 222 PGLPRRRGGAPARRLRRPGAAVHRL 296
>LOC_Os09g38910:12009.t03358:unspliced-genomic OsWAK92 - OsWAK receptor-like protein kinase, expressed| Length = 2757 Score = 26.7 bits (52), Expect(3) = 7.8 Identities = 10/18 (55%), Positives = 12/18 (66%) Frame = +2 / +1 Query: 347 KNNAGYPHNVVFDEDAVP 400 ++ GYP V FDE AVP Sbjct: 802 RSTRGYPLPVTFDETAVP 855 Score = 22.1 bits (42), Expect(3) = 7.8 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +1 / +3 Query: 283 RRRAGVRAQRLQRQGRRDHH 342 RRR +R +RQ ++ HH Sbjct: 477 RRRGAAHRRRGERQQQQRHH 536 Score = 21.7 bits (41), Expect(3) = 7.8 Identities = 7/17 (41%), Positives = 10/17 (58%) Frame = +2 / +1 Query: 494 GFYCEPHAGAGMVGKVT 544 GF+ P+ G GK+T Sbjct: 1027 GFHGNPYLATGCQGKIT 1077 Database: tigr.seq.out Posted date: Jul 20, 2007 8:58 AM Number of letters in database: 166,841,660 Number of sequences in database: 56,278 Lambda K H 0.318 0.134 0.401 Matrix: BLOSUM62 Number of Sequences: 56278 Number of Hits to DB: 181,102,507 Number of extensions: 2485486 Number of successful extensions: 18850 Number of sequences better than 10.0: 42 Length of query: 238 Length of database: 55,613,886 Length adjustment: 49 Effective length of query: 189 Effective length of database: 52,856,264 Effective search space: 9989833896 Effective search space used: 9989833896 Neighboring words threshold: 13 Window for multiple hits: 40 X1: 16 ( 7.3 bits)
