ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89f20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z28347.1|HVPLASC1 H.vulgare (NK 1558) gene for plastocyanin Length = 1884 Score = 1310 bits (661), Expect = 0.0 Identities = 690/699 (98%), Gaps = 8/699 (1%) Strand = Plus / Plus Query: 2 agctttatctatccttactcttttccagccacttaacacttggctaggctagctctcctc 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 881 agctttatctatccttactcttttccagccacttaacacttggctaggctagctctcctc 940 Query: 62 ctctgcattacgtagcaagcagccatggccgccctctcctctgcagccgtgtccgtccct 121 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 941 ctctgcagtacgtagcaagcagccatggccgccctctcctctgcagccgtgtccgtccct 1000 Query: 122 tccttcgccgccgccacccccatgcgcagcagcagaagcagcaggatggttgtgcgcgct 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1001 tccttcgccgccgccacccccatgcgcagcagcagaagcagcaggatggttgtgcgcgct 1060 Query: 182 tccctgggcaagaaggccgccagcgcggccgtggccatggccgccggcgccatgctgctg 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1061 tccctgggcaagaaggccgccagcgcggccgtggccatggccgccggcgccatgctgctg 1120 Query: 242 ggcgggtccgcgatggcacaggacgtgctcctgggtgccaacggcggcgtgctggtgttc 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1121 ggcgggtccgcgatggcacaggacgtgctcctgggtgccaacggcggcgtgctggtgttc 1180 Query: 302 gagcccaacgacttcagcgtcaaggccggcgagaccatcaccttcaagaacaacgccggg 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1181 gagcccaacgacttcagcgtcaaggccggcgagaccatcaccttcaagaacaacgccggg 1240 Query: 362 tacccgcacaacgtggtgttcgacgaggacgccgtgccctccggcgtcgacgtctccaag 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1241 tacccgcacaacgtggtgttcgacgaggacgccgtgccctccggcgtcgacgtctccaag 1300 Query: 422 atctcccaggaggagtacctcaacgcccccggcgagaccttctccgtcaccctcaccgtc 481 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1301 atctcccaggaggagtacctcaacgcccccggcgagaccttctccgtcaccctcaccgtc 1360 Query: 482 cccggcacctacggcttctactgcgagccccacgctggggccggcatggtcggaaaggtc 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1361 cccggcacctacggcttctactgcgagccccacgctggggccggcatggtcggaaaggtc 1420 Query: 542 accgtcaactaatgaagctaccaatttgggtcgattgatcgctcaaattggacgtgtcgt 601 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1421 accgtcaactaatgaagctaccaatttgggtcgattgatcgctcaaattggacgtgtcg- 1479 Query: 602 catgcatgcatcatattgattaattgtacgctatatgtatgtatatgttt-----tctac 656 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 1480 --tgcatgcatcatattgattaattgtacgctatatgtatgtatatgttttctactctac 1537 Query: 657 tctactctactctataagatcgatgaggctcttcgtgat 695 ||||||||||||||||||||||||||||||||||||||| Sbjct: 1538 tctactctactctataagatcgatgaggctcttcgtgat 1576
>emb|Y00704.1|HVPCR Barley mRNA for plastocyanin precursor Length = 662 Score = 1243 bits (627), Expect = 0.0 Identities = 656/665 (98%), Gaps = 8/665 (1%) Strand = Plus / Plus Query: 36 aacacttggctaggctagctctcctcctctgcattacgtagcaagcagccatggccgccc 95 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1 aacacttggctaggctagctctcctcctctgcagtacgtagcaagcagccatggccgccc 60 Query: 96 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tctcctctgcagccgtgtccgtcccttccttcgccgccgccacccccatgcgcagcagca 120 Query: 156 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gaagcagcaggatggttgtgcgcgcttccctgggcaagaaggccgccagcgcggccgtgg 180 Query: 216 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 275 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctcctgg 240 Query: 276 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 335 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 gtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgaga 300 Query: 336 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 395 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccg 360 Query: 396 tgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcg 455 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 tgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcg 420 Query: 456 agaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacg 515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 agaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacg 480 Query: 516 ctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcga 575 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 481 ctggggccggcatggtcggaaaggtcaccgtcaactaatgaagctaccaatttgggtcga 540 Query: 576 ttgatcgctcaaattggacgtgtcgtcatgcatgcatcatattgattaattgtacgctat 635 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 541 ttgatcgctcaaattggacgtgtcg---tgcatgcatcatattgattaattgtacgctat 597 Query: 636 atgtatgtatatgttt-----tctactctactctactctataagatcgatgaggctcttc 690 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 598 atgtatgtatatgttttctactctactctactctactctataagatcgatgaggctcttc 657 Query: 691 gtgat 695 ||||| Sbjct: 658 gtgat 662
>emb|CT828662.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI012P15, full insert sequence Length = 833 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 199 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 255 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 256 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 315 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 316 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 375 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 376 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 435 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 436 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 495 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 496 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 538
>emb|CT828661.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI008I01, full insert sequence Length = 765 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 200 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 256 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 257 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 316 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 317 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 376 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 377 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 436 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 437 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 496 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 497 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 539
>ref|NM_001063065.1| Oryza sativa (japonica cultivar-group) Os06g0101600 (Os06g0101600) mRNA, complete cds Length = 702 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 192 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 248 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 249 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 308 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 309 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 368 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 369 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 428 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 429 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 488 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 489 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 531
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 148996 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 148940 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 148939 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 148880 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 148879 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 148820 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 148819 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 148760 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 148759 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 148700 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 148699 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 148657
>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0075G19 Length = 163558 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Minus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 13892 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 13836 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 13835 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 13776 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 13775 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 13716 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 13715 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 13656 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 13655 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 13596 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 13595 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 13553
>dbj|AK070447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C22, full insert sequence Length = 703 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 193 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 249 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 250 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 309 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 310 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 369 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 370 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 429 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 430 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 489 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 490 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 532
>dbj|AP005621.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0681G01, complete sequence Length = 184118 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 71546 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 71602 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 71603 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 71662 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 71663 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 71722 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 71723 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 71782 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 71783 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 71842 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 71843 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 71885
>gb|AF093636.1|AF093636 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 676 Score = 375 bits (189), Expect = e-100 Identities = 305/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 175 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 231 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 232 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 291 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 292 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 351 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 352 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 411 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 412 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 471 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 472 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 514
>emb|CT832499.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI004F12, full insert sequence Length = 771 Score = 367 bits (185), Expect = 4e-98 Identities = 304/343 (88%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 214 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 270 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 271 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 330 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 331 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 390 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 391 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 450 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||| Sbjct: 451 ggcgagaccttctccgtcacgctcacggtccccggcacatacggcttctactgcgagccg 510 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 511 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 553
>emb|CT833622.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI031E05, full insert sequence Length = 790 Score = 357 bits (180), Expect = 4e-95 Identities = 306/346 (88%), Gaps = 4/346 (1%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 201 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 257 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 258 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 317 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct: 318 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacgaggac 377 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || |||||||||||| |||||||| || |||||||||||||||||||||||| Sbjct: 378 gcggttccgagcggcgtcgacgtgtccaagatatcgcaggaggagtacctcaacgccccc 437 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 438 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagccg 497 Query: 512 cacgctggggc-cggcatggtcggaaaggtcaccgtcaactaatga 556 ||||| || || || |||||||| ||||||||||||||| ||||| Sbjct: 498 cacgccggagcttgggatggtcggcaaggtcaccgtcaacaaatga 543
>gb|AF009412.1|AF009412 Oryza sativa plastocyanin precursor, mRNA, complete cds Length = 745 Score = 337 bits (170), Expect = 3e-89 Identities = 300/343 (87%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 187 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 243 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 244 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 303 Query: 332 gagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggac 391 ||||||||||| ||||||||||||||||| | ||| |||||||||||||||||| ||||| Sbjct: 304 gagaccatcacgttcaagaacaacgccggcttccctcacaacgtggtgttcgacaaggac 363 Query: 392 gccgtgccctccggcgtcgacgtctccaagatctcccaggaggagtacctcaacgccccc 451 || || || ||||||| || | ||||| || || |||||||||||||||||||||||| Sbjct: 364 gcggttccgagcggcgtcaacttgtccaaaatatcgcaggaggagtacctcaacgccccc 423 Query: 452 ggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagccc 511 |||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||| Sbjct: 424 ggcgagaccttctccgtcacgctcaccgtccccggcacatacggnttctactgcgagccg 483 Query: 512 cacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 484 cacgccggagctgggatggtcggcaaggtcaccgtcaactaat 526
>gb|AY104253.1| Zea mays PCO133617 mRNA sequence Length = 1001 Score = 246 bits (124), Expect = 9e-62 Identities = 238/276 (86%) Strand = Plus / Plus Query: 286 cggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggcgagaccatcacctt 345 ||||| ||| || |||||||||| | | |||| ||||||||||||||| |||||||| || Sbjct: 462 cggcgggctcgtcttcgagcccagccagttcaccgtcaaggccggcgacaccatcacatt 521 Query: 346 caagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctccgg 405 ||||||||||||||| | |||||||||||| || |||||||| |||| ||||| ||| Sbjct: 522 caagaacaacgccggcttcccgcacaacgtcgtcttcgacgaagacgaggtgccgagcgg 581 Query: 406 cgtcgacgtctccaagatctcccaggaggagtacctcaacgcccccggcgagaccttctc 465 |||||||| | |||||||||| |||||||||||||||||||| || |||||||||| ||| Sbjct: 582 cgtcgacgccaccaagatctcgcaggaggagtacctcaacgcgccaggcgagacctactc 641 Query: 466 cgtcaccctcaccgtccccggcacctacggcttctactgcgagccccacgctggggccgg 525 ||||||||||||||| || || ||||||||||||||||||||||| || || ||||| Sbjct: 642 cgtcaccctcaccgtgccgggaacctacggcttctactgcgagccgcatcaaggagccgg 701 Query: 526 catggtcggaaaggtcaccgtcaactaatgaagcta 561 |||||||| ||| ||||||||||||||| |||||| Sbjct: 702 aatggtcggcaagatcaccgtcaactaattaagcta 737
>emb|CT829415.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN071I03, full insert sequence Length = 711 Score = 147 bits (74), Expect = 6e-32 Identities = 98/106 (92%) Strand = Plus / Plus Query: 449 cccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgag 508 ||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 311 cccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgag 370 Query: 509 ccccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 || ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 371 ccgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 416
>emb|CT828665.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN078I05, full insert sequence Length = 465 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 450 ccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagc 509 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 135 ccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagc 194 Query: 510 cccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 | ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 195 cgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 239
>emb|CT828664.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA056D17, full insert sequence Length = 409 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 450 ccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagc 509 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 79 ccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagc 138 Query: 510 cccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 | ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 139 cgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 183
>emb|CT828658.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN059K06, full insert sequence Length = 679 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 450 ccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagc 509 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 360 ccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagc 419 Query: 510 cccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 | ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 420 cgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 464
>emb|CT828405.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN008B11, full insert sequence Length = 551 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 450 ccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagc 509 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 230 ccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagc 289 Query: 510 cccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 | ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 290 cgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 334
>emb|CT831820.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN056D03, full insert sequence Length = 563 Score = 145 bits (73), Expect = 2e-31 Identities = 97/105 (92%) Strand = Plus / Plus Query: 450 ccggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagc 509 |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct: 244 ccggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagc 303 Query: 510 cccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 | ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 304 cgcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 348
>emb|CT831931.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN081F21, full insert sequence Length = 882 Score = 143 bits (72), Expect = 1e-30 Identities = 96/104 (92%) Strand = Plus / Plus Query: 451 cggcgagaccttctccgtcaccctcaccgtccccggcacctacggcttctactgcgagcc 510 ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 560 cggcgagaccttctccgtcacgctcaccgtccccggcacatacggcttctactgcgagcc 619 Query: 511 ccacgctggggccggcatggtcggaaaggtcaccgtcaactaat 554 ||||| || || || |||||||| ||||||||||||||||||| Sbjct: 620 gcacgccggagctgggatggtcggcaaggtcaccgtcaactaat 663
>emb|CT828663.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA005H14, full insert sequence Length = 719 Score = 103 bits (52), Expect = 8e-19 Identities = 108/126 (85%), Gaps = 3/126 (2%) Strand = Plus / Plus Query: 212 gtggccatggccgccggcgccatgctgctgggcgggtccgcgatggcacaggacgtgctc 271 |||||| |||||||| |||||||||| |||||| ||| ||||| ||||| ||||| Sbjct: 197 gtggccgtggccgccagcgccatgctcgcgggcgg---cgccatggcgcaggaggtgctt 253 Query: 272 ctgggtgccaacggcggcgtgctggtgttcgagcccaacgacttcagcgtcaaggccggc 331 || || ||||| ||||||||||||||||||||||| |||||||||| ||||||| ||||| Sbjct: 254 ctcggcgccaatggcggcgtgctggtgttcgagccgaacgacttcaccgtcaagtccggc 313 Query: 332 gagacc 337 |||||| Sbjct: 314 gagacc 319
>dbj|AB252146.1| Triticum aestivum Tamyb3 mRNA for myb-related protein, partial cds Length = 825 Score = 99.6 bits (50), Expect = 1e-17 Identities = 60/62 (96%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 74 tagcaagcagccatggccgccctctcctctgcag-ccgtgtccgtcccttccttcgccgc 132 |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 133 tagctagcagccatggccgccctctcctctgcagcccgtgtccgtcccttccttcgccgc 74 Query: 133 cg 134 || Sbjct: 73 cg 72 Score = 46.1 bits (23), Expect = 0.17 Identities = 29/31 (93%) Strand = Plus / Minus Query: 158 agcagcaggatggttgtgcgcgcttccctgg 188 |||||||||||||| |||||||| ||||||| Sbjct: 47 agcagcaggatggtggtgcgcgcgtccctgg 17
>gb|DQ246188.1| Zea mays clone 15091 mRNA sequence Length = 671 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| |||||||||||||||||||||||| |||| Sbjct: 343 ttcaagaacaacgcagggttcccgcacaacgtggtgttcgacgaagacg 391 Score = 46.1 bits (23), Expect = 0.17 Identities = 26/27 (96%) Strand = Plus / Plus Query: 527 atggtcggaaaggtcaccgtcaactaa 553 |||||||||||| |||||||||||||| Sbjct: 532 atggtcggaaagctcaccgtcaactaa 558
>gb|AC189318.1| Brassica rapa subsp. pekinensis clone KBrB036G18, complete sequence Length = 128207 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Minus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||||||| |||||||||||||||||||| |||| Sbjct: 16040 ttcaagaacaacgcagggtacccacacaacgtggtgttcgacgaagacg 15992 Score = 46.1 bits (23), Expect = 0.17 Identities = 26/27 (96%) Strand = Plus / Minus Query: 527 atggtcggaaaggtcaccgtcaactaa 553 |||||||||||| |||||||||||||| Sbjct: 15851 atggtcggaaagctcaccgtcaactaa 15825
>emb|CT980214.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 704 Score = 73.8 bits (37), Expect = 8e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 ||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 443 ttcaagaacttcgccgggttcccgcacaacgtggtgttcgacgaggacg 491
>gb|AY614612.1| Ulva pertusa plastocyanin precursor, mRNA, complete cds; nuclear gene for plastid product Length = 787 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 483 ccggcacctacggcttctactgcgagccccacgctggggccggcatg 529 ||||||| |||||| |||||||||||||||| ||||| ||||||||| Sbjct: 390 ccggcacatacggcgtctactgcgagccccatgctggcgccggcatg 436
>gb|AF031545.1|AF031545 Fritillaria agrestis plastocyanin (ploc) mRNA, complete cds Length = 720 Score = 61.9 bits (31), Expect = 3e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 390 ||||||||||||||||||| ||||||||| ||| ||||||| ||||| Sbjct: 320 ttcaagaacaacgccgggttcccgcacaatgtgttgttcgatgagga 366
>dbj|AK226194.1| Arabidopsis thaliana mRNA for plastocyanin, complete cds, clone: RAFL04-10-A08 Length = 677 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 311 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 359
>gb|BT025525.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 516 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 301 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 349
>ref|NM_106259.2| Arabidopsis thaliana copper ion binding / electron transporter (AT1G76100) mRNA, complete cds Length = 771 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 326 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 374
>emb|Z83321.1|ATZ83321 A.thaliana 16 kb chromosome 1 DNA fragment Length = 16202 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 8687 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 8735
>gb|BT021977.1| Arabidopsis thaliana At1g76100 mRNA, complete cds Length = 746 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 337 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 385
>gb|AC009978.3|AC009978 Genomic sequence for Arabidopsis thaliana BAC T23E18 from chromosome I, complete sequence Length = 97554 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 10610 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 10562
>emb|X02965.1|SPPCYA Silene pratensis mRNA for plastocyanin precursor Length = 773 Score = 58.0 bits (29), Expect = 5e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 338 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 390 |||||||||||||||||||| |||| ||| ||||| || || ||||||||||| Sbjct: 350 atcaccttcaagaacaacgctgggttcccacacaatgtcgtcttcgacgagga 402
>gb|M20937.1|ATHPCG A.thaliana plastocyanin gene, complete cds Length = 1447 Score = 58.0 bits (29), Expect = 5e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 |||||||||||||| |||| ||| || ||||||||||||||||| |||| Sbjct: 957 ttcaagaacaacgcagggttcccacataacgtggtgttcgacgaagacg 1005
>gb|CP000435.1| Synechococcus sp. CC9311, complete genome Length = 2606748 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Plus Query: 485 ggcacctacggcttctactgcgagccccacgctggggccggcatggtcgg 534 ||||||| || ||||||||||||||||||| ||| || ||||||||||| Sbjct: 1690064 ggcaccttcgacttctactgcgagccccaccgtggcgctggcatggtcgg 1690113
>emb|X04693.1|SOPCG Spinach gene for plastocyanin Length = 1000 Score = 52.0 bits (26), Expect = 0.003 Identities = 59/70 (84%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgccgtgccctcc 403 ||||||||||| ||||| | ||| |||||||| ||||| |||||||||| | |||||| Sbjct: 542 ttcaagaacaatgccggattcccccacaacgtagtgtttgacgaggacgagattccctcc 601 Query: 404 ggcgtcgacg 413 || ||||||| Sbjct: 602 ggtgtcgacg 611
>gb|DQ226793.1| Boechera divaricarpa isolate SLW-B-C02 mRNA sequence Length = 701 Score = 50.1 bits (25), Expect = 0.011 Identities = 43/49 (87%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 ||||||||||| || |||| ||| |||||||| |||||||| ||||||| Sbjct: 343 ttcaagaacaatgctgggttcccacacaacgttgtgttcgatgaggacg 391
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 48.1 bits (24), Expect = 0.043 Identities = 27/28 (96%) Strand = Plus / Plus Query: 199 cgccagcgcggccgtggccatggccgcc 226 |||||||||||| ||||||||||||||| Sbjct: 3177030 cgccagcgcggcggtggccatggccgcc 3177057
>gb|J05524.1|CREAPCYN C.reinhardtii apoplastocyanin (PC6-2) mRNA, complete cds Length = 577 Score = 48.1 bits (24), Expect = 0.043 Identities = 72/88 (81%) Strand = Plus / Plus Query: 321 tcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggtgt 380 ||||| ||||||||||| | | |||| ||||||||| || | ||| |||||| | || | Sbjct: 227 tcaagtccggcgagaccgtgaacttcgtgaacaacgctggcttcccccacaacatcgtct 286 Query: 381 tcgacgaggacgccgtgccctccggcgt 408 |||||||||| ||| | ||||||||||| Sbjct: 287 tcgacgaggatgccatcccctccggcgt 314 Score = 44.1 bits (22), Expect = 0.68 Identities = 64/78 (82%) Strand = Plus / Plus Query: 437 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 496 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 343 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 402 Query: 497 ttctactgcgagccccac 514 | |||||||||||||||| Sbjct: 403 tactactgcgagccccac 420
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 633 tatatgtatgtatatgttttcta 655 ||||||||||||||||||||||| Sbjct: 8198698 tatatgtatgtatatgttttcta 8198676
>gb|DQ213132.1| Taeniopygia guttata clone 0058P0029F06 KIAA0878-like mRNA, complete sequence Length = 757 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 146 cgcagcagcagaagcagcaggat 168 ||||||||||||||||||||||| Sbjct: 141 cgcagcagcagaagcagcaggat 119
>gb|AC007594.5| Drosophila melanogaster, chromosome 3R, region 87B-87C, BAC clone BACR28I14, complete sequence Length = 161601 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 633 tatatgtatgtatatgttttcta 655 ||||||||||||||||||||||| Sbjct: 14878 tatatgtatgtatatgttttcta 14856
>emb|Z50186.1|PNPCBMR P.nigra mRNA for plastocyanin b Length = 699 Score = 46.1 bits (23), Expect = 0.17 Identities = 44/51 (86%) Strand = Plus / Plus Query: 343 cttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacgc 393 |||||||||||| ||||||| ||| || ||||| | |||||||||||||| Sbjct: 322 cttcaagaacaatgccgggttcccacataacgttctcttcgacgaggacgc 372
>gb|AC009741.5|AC009741 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone BACR44K17, complete sequence Length = 166863 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Minus Query: 633 tatatgtatgtatatgttttcta 655 ||||||||||||||||||||||| Sbjct: 137841 tatatgtatgtatatgttttcta 137819
>gb|M97702.1|DROGLUSTD Drosophila melanogaster glutathione S-transferase gene Length = 14707 Score = 46.1 bits (23), Expect = 0.17 Identities = 23/23 (100%) Strand = Plus / Plus Query: 633 tatatgtatgtatatgttttcta 655 ||||||||||||||||||||||| Sbjct: 8840 tatatgtatgtatatgttttcta 8862
>dbj|BA000002.3| Aeropyrum pernix K1 DNA, complete genome Length = 1669696 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 273 tgggtgccaacggcggcgtgct 294 |||||||||||||||||||||| Sbjct: 1090566 tgggtgccaacggcggcgtgct 1090587
>ref|XM_001208997.1| Aspergillus terreus NIH2624 inorganic pyrophosphatase (ATEG_01632) mRNA, complete cds Length = 867 Score = 44.1 bits (22), Expect = 0.68 Identities = 25/26 (96%) Strand = Plus / Plus Query: 420 agatctcccaggaggagtacctcaac 445 |||||||| ||||||||||||||||| Sbjct: 176 agatctccaaggaggagtacctcaac 201
>ref|XR_022113.1| PREDICTED: Pan troglodytes transmembrane 9 superfamily member 1 (TM9SF1), mRNA Length = 2723 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1644 cagaagcagcaggatggttgtg 1623
>ref|XM_001168091.1| PREDICTED: Pan troglodytes hypothetical protein LOC744886, transcript variant 4 (LOC744886), mRNA Length = 6158 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 299 cagaagcagcaggatggttgtg 278
>gb|AC189965.3| Rhesus Macaque BAC CH250-359J12 () complete sequence Length = 194563 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 10586 cagaagcagcaggatggttgtg 10607
>gb|AE014298.4| Drosophila melanogaster chromosome X, complete sequence Length = 22422827 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 649 ttttctactctactctactcta 670 |||||||||||||||||||||| Sbjct: 5526205 ttttctactctactctactcta 5526184
>gb|DQ661649.1| Delftia sp. AN3 pKC505-AN1 gene cluster, complete sequence Length = 29831 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 cgtggccatggccgccggcgcc 232 |||||||||||||||||||||| Sbjct: 17013 cgtggccatggccgccggcgcc 17034
>ref|XM_001112662.1| PREDICTED: Macaca mulatta similar to transmembrane 9 superfamily member 1 isoform a, transcript variant 1 (LOC715472), mRNA Length = 2061 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1267 cagaagcagcaggatggttgtg 1246
>ref|XM_001112694.1| PREDICTED: Macaca mulatta similar to transmembrane 9 superfamily member 1 isoform a, transcript variant 2 (LOC715472), mRNA Length = 2499 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1267 cagaagcagcaggatggttgtg 1246
>gb|DQ122875.1| Chlamydomonas incerta chloroplast plastocyanin (petE) mRNA, complete cds; nuclear gene for chloroplast product Length = 620 Score = 44.1 bits (22), Expect = 0.68 Identities = 73/90 (81%) Strand = Plus / Plus Query: 319 cgtcaaggccggcgagaccatcaccttcaagaacaacgccgggtacccgcacaacgtggt 378 ||||||| ||||||||||||| | |||| ||||||||| || | ||| |||||| | || Sbjct: 246 cgtcaagtccggcgagaccattaacttcgtgaacaacgctggcttcccccacaacatcgt 305 Query: 379 gttcgacgaggacgccgtgccctccggcgt 408 ||||| ||||| ||| | ||||| ||||| Sbjct: 306 cttcgatgaggatgccatcccctcgggcgt 335 Score = 44.1 bits (22), Expect = 0.68 Identities = 64/78 (82%) Strand = Plus / Plus Query: 437 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 496 ||||| ||||||||||||||||||| ||| ||| || ||| | ||||| |||||| Sbjct: 364 tacctgaacgcccccggcgagacctactcgctcaagctgaccaccgccggcgagtacggc 423 Query: 497 ttctactgcgagccccac 514 | |||||||||||||||| Sbjct: 424 tactactgcgagccccac 441
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.68 Identities = 43/50 (86%) Strand = Plus / Minus Query: 485 ggcacctacggcttctactgcgagccccacgctggggccggcatggtcgg 534 |||||||||| || |||||||||||||||| || || ||||||||||| Sbjct: 962984 ggcacctacgactactactgcgagccccaccgcggtgctggcatggtcgg 962935
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 44.1 bits (22), Expect = 0.68 Identities = 37/42 (88%) Strand = Plus / Minus Query: 499 ctactgcgagccccacgctggggccggcatggtcggaaaggt 540 |||||||||||||||| ||| ||||||||||| || ||||| Sbjct: 903783 ctactgcgagccccaccgtggtgccggcatggttggcaaggt 903742
>gb|AC119572.26| Ustilago hordei strain 4875-4 clone uhobac-5d9, complete sequence Length = 152059 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 ccggcgagaccatcaccttcaa 348 |||||||||||||||||||||| Sbjct: 108213 ccggcgagaccatcaccttcaa 108234
>ref|NM_001014842.1| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 2, mRNA Length = 2124 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>ref|NM_006405.5| Homo sapiens transmembrane 9 superfamily member 1 (TM9SF1), transcript variant 1, mRNA Length = 2449 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1596 cagaagcagcaggatggttgtg 1575
>gb|DQ207951.1| Comamonas sp. CNB-1 putative regulatory protein (cnbR), putative ferredoxin (orf1), 2-amino-5-chlorophenol 1,6-dioxygenase beta subunit (cnbCa), 2-amino-5-chlorophenol 1,6-dioxygenase alpha subunit (cnbCb), 2-amino-5-chloromuconic semialdehyde dehydrogenase (cnbD), putative 2-keto-4-pentenoate hydratase (cnbE), putative 4-oxalocrotonate decarboxylase (cnbF), 4-oxalocrotonate tautomerase (cnbG), 2-amino-5-chloromuconate deaminase (cnbH), and putative 2-keto-4-pentenoate hydratase (cnbI) genes, complete cds Length = 10644 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 211 cgtggccatggccgccggcgcc 232 |||||||||||||||||||||| Sbjct: 7634 cgtggccatggccgccggcgcc 7655
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gccggcgccatgctgctgggcg 245 |||||||||||||||||||||| Sbjct: 4921238 gccggcgccatgctgctgggcg 4921217
>gb|BC010856.2| Homo sapiens transmembrane 9 superfamily member 1, mRNA (cDNA clone MGC:9160 IMAGE:3899246), complete cds Length = 2121 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1265 cagaagcagcaggatggttgtg 1244
>gb|AC023740.4| Drosophila melanogaster X BAC RP98-27J18 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163764 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 649 ttttctactctactctactcta 670 |||||||||||||||||||||| Sbjct: 79575 ttttctactctactctactcta 79554
>gb|AE012090.1| Xanthomonas axonopodis pv. citri str. 306, section 468 of 469 of the complete genome Length = 10947 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gccggcgccatgctgctgggcg 245 |||||||||||||||||||||| Sbjct: 5924 gccggcgccatgctgctgggcg 5903
>emb|CR859801.1| Pongo pygmaeus mRNA; cDNA DKFZp469F1634 (from clone DKFZp469F1634) Length = 2227 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1370 cagaagcagcaggatggttgtg 1349
>emb|BX161390.1|CNSLT1I7O human full-length cDNA clone CS0DC007YI17 of Neuroblastoma of Homo sapiens (human) Length = 2354 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1576 cagaagcagcaggatggttgtg 1555
>dbj|AK179003.1| Mus musculus cDNA, clone:Y0G0108L13, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000034311, based on BLAT search Length = 67 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 146 cgcagcagcagaagcagcagga 167 |||||||||||||||||||||| Sbjct: 1 cgcagcagcagaagcagcagga 22
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 115 cgtcccttccttcgccgccgcc 136 |||||||||||||||||||||| Sbjct: 1160557 cgtcccttccttcgccgccgcc 1160578
>emb|CR621520.1| full-length cDNA clone CS0DI012YJ08 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1903 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1386 cagaagcagcaggatggttgtg 1365
>emb|CR618221.1| full-length cDNA clone CS0DC014YA08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 2107 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1311 cagaagcagcaggatggttgtg 1290
>emb|CR614922.1| full-length cDNA clone CS0DI016YC09 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1806 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1021 cagaagcagcaggatggttgtg 1000
>emb|CR606704.1| full-length cDNA clone CS0DI067YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2167 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1367 cagaagcagcaggatggttgtg 1346
>emb|CR604869.1| full-length cDNA clone CS0DA001YH23 of Neuroblastoma of Homo sapiens (human) Length = 2136 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1310 cagaagcagcaggatggttgtg 1289
>emb|AM118080.1| Ustilago hordei mating type region MAT-1, strain 364 Length = 526707 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Plus Query: 327 ccggcgagaccatcaccttcaa 348 |||||||||||||||||||||| Sbjct: 478061 ccggcgagaccatcaccttcaa 478082
>emb|AL136295.3|CNS01DVZ Human chromosome 14 DNA sequence BAC R-468E2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 194815 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 19476 cagaagcagcaggatggttgtg 19455
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 224 gccggcgccatgctgctgggcg 245 |||||||||||||||||||||| Sbjct: 4922474 gccggcgccatgctgctgggcg 4922453
>emb|BX161494.1|CNSLT1I7P human full-length cDNA clone CS0DJ012YD11 of T cells (Jurkat cell line) of Homo sapiens (human) Length = 2002 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1538 cagaagcagcaggatggttgtg 1517
>gb|U94831.1|HSU94831 Homo sapiens multispanning membrane protein mRNA, complete cds Length = 2114 Score = 44.1 bits (22), Expect = 0.68 Identities = 22/22 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgtg 175 |||||||||||||||||||||| Sbjct: 1263 cagaagcagcaggatggttgtg 1242
>dbj|AB026687.1| Physcomitrella patens mRNA for plastocyanin precursor, complete cds Length = 816 Score = 44.1 bits (22), Expect = 0.68 Identities = 28/30 (93%) Strand = Plus / Plus Query: 481 ccccggcacctacggcttctactgcgagcc 510 |||||||||||||| |||||||||||||| Sbjct: 504 ccccggcacctacgagttctactgcgagcc 533
>gb|L07282.1|CREPETE Chlamydomonas reinhardtii plastocyanin (petE) gene, complete cds Length = 3380 Score = 44.1 bits (22), Expect = 0.68 Identities = 64/78 (82%) Strand = Plus / Plus Query: 437 tacctcaacgcccccggcgagaccttctccgtcaccctcaccgtccccggcacctacggc 496 ||||| ||||||||||||||||||| ||| || | || |||| ||||| |||||| Sbjct: 2589 tacctgaacgcccccggcgagacctactcggtgaagctgaccgctgccggcgagtacggc 2648 Query: 497 ttctactgcgagccccac 514 | |||||||||||||||| Sbjct: 2649 tactactgcgagccccac 2666
>gb|AC189713.8| Canis Familiaris chromosome 8, clone XX-412J10, complete sequence Length = 201757 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 78617 gcagcagcagaagcagcagga 78637
>ref|XM_001238644.1| Eimeria tenella str. Houghton hypothetical protein (ETEN112) mRNA, complete cds Length = 435 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 catgcgcagcagcagaagcagcagg 166 ||||||||||||||| ||||||||| Sbjct: 347 catgcgcagcagcagcagcagcagg 371
>gb|DQ244853.1| Zea mays clone 11183 mRNA sequence Length = 713 Score = 42.1 bits (21), Expect = 2.7 Identities = 42/49 (85%) Strand = Plus / Plus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 ||||||||||| || || | ||| |||||||| |||||||| ||||||| Sbjct: 346 ttcaagaacaatgctggattcccacacaacgttgtgttcgatgaggacg 394
>gb|CP000463.1| Rhodopseudomonas palustris BisA53, complete genome Length = 5505494 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 328 cggcgagaccatcaccttcaagaac 352 |||| |||||||||||||||||||| Sbjct: 1709117 cggcaagaccatcaccttcaagaac 1709141
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 18388132 gcagcagcagaagcagcagga 18388112
>gb|AC189346.1| Brassica rapa subsp. pekinensis clone KBrB042N05, complete sequence Length = 96650 Score = 42.1 bits (21), Expect = 2.7 Identities = 42/49 (85%) Strand = Plus / Minus Query: 344 ttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgaggacg 392 ||||||||||| || || | ||| |||||||| |||||||| ||||||| Sbjct: 38058 ttcaagaacaatgctggattcccacacaacgttgtgttcgatgaggacg 38010
>gb|AC187724.2| Pan troglodytes BAC clone CH251-318O15 from chromosome 7, complete sequence Length = 188968 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 aggctagctctcctcctctgc 67 ||||||||||||||||||||| Sbjct: 1803 aggctagctctcctcctctgc 1783
>ref|XM_001068553.1| PREDICTED: Rattus norvegicus similar to urocortin III (predicted) (RGD1562213_predicted), mRNA Length = 1151 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 271 gcagcagcagaagcagcagga 251
>ref|XM_574076.2| PREDICTED: Rattus norvegicus similar to urocortin III (predicted) (RGD1562213_predicted), mRNA Length = 1151 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 271 gcagcagcagaagcagcagga 251
>ref|NW_001509355.1| Eimeria tenella str. Houghton chromosome 1 emb|AM269894.1| Eimeria tenella chromosome 1, ordered contigs Length = 1347714 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 142 catgcgcagcagcagaagcagcagg 166 ||||||||||||||| ||||||||| Sbjct: 375106 catgcgcagcagcagcagcagcagg 375082 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 145 gcgcagcagcagaagcagcag 165 ||||||||||||||||||||| Sbjct: 470386 gcgcagcagcagaagcagcag 470366
>ref|XR_002749.1| PREDICTED: Mus musculus similar to THO complex subunit 4 (Tho4) (RNA and export factor binding protein 1) (REF1-I) (Ally of AML-1 and LEF-1) (Aly/REF) (LOC670007), mRNA Length = 2938 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 2155 gcagcagcagaagcagcagga 2175 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 2398 gcagcagcagaagcagcagga 2418
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 333 agaccatcaccttcaagaaca 353 ||||||||||||||||||||| Sbjct: 1887121 agaccatcaccttcaagaaca 1887141
>ref|XM_367503.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein (MG07414.4) partial mRNA Length = 2712 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 gcggccgtggccatggccgcc 226 ||||||||||||||||||||| Sbjct: 2525 gcggccgtggccatggccgcc 2505
>gb|AC099576.12| Mus musculus chromosome 3, clone RP23-93G15, complete sequence Length = 156835 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 652 tctactctactctactctata 672 ||||||||||||||||||||| Sbjct: 10739 tctactctactctactctata 10719
>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence Length = 178764 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 81036 ttctactctactctactctat 81016
>gb|AC150415.3| Branchiostoma floridae clone CH302-62D14, complete sequence Length = 147823 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 650 tttctactctactctactcta 670 ||||||||||||||||||||| Sbjct: 9733 tttctactctactctactcta 9753
>gb|AF101236.1| Naja sputatrix neutral phospholipase A2 (NPLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 652 tctactctactctactctata 672 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167
>gb|AF101235.1| Naja sputatrix acidic phospholipase A2 (APLA2) gene, complete cds Length = 5879 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 652 tctactctactctactctata 672 ||||||||||||||||||||| Sbjct: 5187 tctactctactctactctata 5167
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 205 cgcggccgtggccatggccgc 225 ||||||||||||||||||||| Sbjct: 1916416 cgcggccgtggccatggccgc 1916436
>gb|AC150492.2| Bos taurus BAC CH240-454H24 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 185197 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcaggatggt 171 |||||||||| |||||||||||||| Sbjct: 127287 gcagcagcagcagcagcaggatggt 127263
>ref|XM_588051.2| PREDICTED: Bos taurus similar to NPC1 (Niemann-Pick disease, type C1, gene)-like 1 (LOC539550), mRNA Length = 4002 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 3828 gcagcagcagaagcagcagga 3848
>gb|AC167969.2| Mus musculus BAC clone RP24-446H24 from chromosome 17, complete sequence Length = 178774 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 116498 gcagcagcagaagcagcagga 116478
>gb|AY190956.1| Drosophila virilis clone DVIF01_06_H02 (D1438) genomic sequence Length = 46427 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 2437 gcagcagcagaagcagcagga 2417
>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence Length = 186047 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 47 aggctagctctcctcctctgc 67 ||||||||||||||||||||| Sbjct: 148698 aggctagctctcctcctctgc 148678
>gb|AC122384.3| Mus musculus BAC clone RP24-63P8 from chromosome 17, complete sequence Length = 190880 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 10295 gcagcagcagaagcagcagga 10275
>gb|AC112273.4| Mus musculus BAC clone RP24-122H5 from 3, complete sequence Length = 180155 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 23610 ttctactctactctactctat 23590
>dbj|AK074734.1| Homo sapiens cDNA FLJ90253 fis, clone NT2RM4000284, highly similar to Human IgG Fc receptor hFcRn mRNA Length = 2674 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 146 cgcagcagcagaagcagcaggatgg 170 ||||||||||| ||||||||||||| Sbjct: 1854 cgcagcagcagcagcagcaggatgg 1830
>dbj|AB223673.1| Aspergillus oryzae cDNA, contig sequence: AoEST0513 Length = 679 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 306 ccaacgacttcagcgtcaaggccgg 330 |||||||||||| |||||||||||| Sbjct: 209 ccaacgacttcaccgtcaaggccgg 233
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 306 ccaacgacttcagcgtcaaggccgg 330 |||||||||||| |||||||||||| Sbjct: 1916264 ccaacgacttcaccgtcaaggccgg 1916240
>gb|AC128655.8| Homo sapiens 3 BAC RP11-260O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 88017 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 633 tatatgtatgtatatgttttc 653 ||||||||||||||||||||| Sbjct: 15105 tatatgtatgtatatgttttc 15125
>gb|AC164627.4| Mus musculus 10 BAC RP23-382A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192275 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 13363 gcagcagcagaagcagcagga 13383 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 13606 gcagcagcagaagcagcagga 13626
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 319 cgtcaaggccggcgagaccat 339 ||||||||||||||||||||| Sbjct: 1713828 cgtcaaggccggcgagaccat 1713808
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 213 tggccatggccgccggcgccatgctgctgggcg 245 ||||| ||||||||| |||| |||||||||||| Sbjct: 1408585 tggccctggccgccgacgccgtgctgctgggcg 1408617
>emb|CR722792.2|CNS0GKNI Tetraodon nigroviridis full-length cDNA Length = 1143 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 741 gcagcagcagaagcagcagga 761
>gb|AC010626.6| Homo sapiens chromosome 5 clone CTD-2138K21, complete sequence Length = 160312 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 cagcagcagaagcagcaggat 168 ||||||||||||||||||||| Sbjct: 5651 cagcagcagaagcagcaggat 5671
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 ggccgtggccatggccgccggcgcc 232 |||||||||||||||||||| |||| Sbjct: 41984392 ggccgtggccatggccgccgccgcc 41984416
>gb|AC091990.2| Homo sapiens chromosome 5 clone RP11-82D20, complete sequence Length = 177470 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cagcagcagaagcagcaggat 168 ||||||||||||||||||||| Sbjct: 47516 cagcagcagaagcagcaggat 47496
>gb|AC020689.8| Homo sapiens chromosome , clone RP11-440M23, complete sequence Length = 214702 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 633 tatatgtatgtatatgttttc 653 ||||||||||||||||||||| Sbjct: 80609 tatatgtatgtatatgttttc 80589
>emb|AL390056.7| Human DNA sequence from clone RP3-493I16 on chromosome 6 Contains the 5' end of the RAB3IP2 gene for RAB3 interacting protein 2 and a CpG island, complete sequence Length = 62390 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 634 atatgtatgtatatgttttct 654 ||||||||||||||||||||| Sbjct: 54158 atatgtatgtatatgttttct 54178
>emb|AL158210.12| Human DNA sequence from clone RP11-554I8 on chromosome 10 Contains two novel genes, complete sequence Length = 134826 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 116585 gcagcagcagaagcagcagga 116605
>gb|AC012629.9| Homo sapiens chromosome 5 clone CTD-2154B17, complete sequence Length = 171603 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 cagcagcagaagcagcaggat 168 ||||||||||||||||||||| Sbjct: 12898 cagcagcagaagcagcaggat 12878
>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0431G06 Length = 140466 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 ggccgtggccatggccgccggcgcc 232 |||||||||||||||||||| |||| Sbjct: 86469 ggccgtggccatggccgccgccgcc 86493
>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16 Length = 349746 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 328 cggcgagaccatcaccttcaagaac 352 |||| |||||||||||||||||||| Sbjct: 246840 cggcaagaccatcaccttcaagaac 246816
>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16 Length = 349260 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 375 tggtgttcgacgaggacgccg 395 ||||||||||||||||||||| Sbjct: 9760 tggtgttcgacgaggacgccg 9780
>gb|AC159909.8| Mus musculus 10 BAC RP23-312M21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184546 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 101275 ttctactctactctactctat 101295
>gb|AC008349.2|AC008349 Drosophila melanogaster, chromosome 2R, region 58E-58E, BAC clone BACR01E01, complete sequence Length = 173373 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 56194 gcagcagcagaagcagcagga 56174
>gb|AY235187.1| Meleagris gallopavo clone MNT-222 microsatellite sequence Length = 741 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcaggatggt 171 |||||||||| |||||||||||||| Sbjct: 524 gcagcagcagcagcagcaggatggt 548
>gb|AF260581.1|AF260581 Amycolatopsis mediterranei plasmid pHGF8002 tripeptidyl aminopeptidase gene, partial cds; 3-Deoxy-D-arabino-heptulosonate 7-phosphate synthase gene, complete cds; and 2,5 dichloro-2,5 cyclohexadiene-1,4 diol dehydrogenase gene, partial cds Length = 2049 Score = 42.1 bits (21), Expect = 2.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 389 gacgccgtgccctccggcgtcgacg 413 |||||||||||| |||||||||||| Sbjct: 182 gacgccgtgcccgccggcgtcgacg 158
>dbj|AP004948.1| Lotus japonicus genomic DNA, chromosome , clone:LjT35I07, TM0121b, complete sequence Length = 56086 Score = 42.1 bits (21), Expect = 2.7 Identities = 45/53 (84%) Strand = Plus / Plus Query: 338 atcaccttcaagaacaacgccgggtacccgcacaacgtggtgttcgacgagga 390 ||||| ||||||||||| || || | ||| |||||||| || ||||||||||| Sbjct: 47310 atcacgttcaagaacaatgctggtttccctcacaacgttgtcttcgacgagga 47362
>ref|XM_308922.2| Anopheles gambiae str. PEST ENSANGP00000012810 (ENSANGG00000010321), partial mRNA Length = 2103 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 1152 gcagcagcagaagcagcagga 1172
>gb|AC153941.3| Mus musculus 10 BAC RP24-403F8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 205654 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 19418 ttctactctactctactctat 19438
>ref|NM_001012155.1| Rattus norvegicus transmembrane 9 superfamily member 1 (Tm9sf1), mRNA gb|BC081891.1| Rattus norvegicus transmembrane 9 superfamily member 1, mRNA (cDNA clone MGC:93788 IMAGE:7109579), complete cds Length = 2441 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 154 cagaagcagcaggatggttgt 174 ||||||||||||||||||||| Sbjct: 1618 cagaagcagcaggatggttgt 1598
>emb|CR788232.9| Zebrafish DNA sequence from clone DKEY-283M16 in linkage group 2, complete sequence Length = 70979 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 60677 ttctactctactctactctat 60697
>emb|CT010565.14| Mouse DNA sequence from clone RP23-263E11 on chromosome 16, complete sequence Length = 200242 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 53788 gcagcagcagaagcagcagga 53768
>gb|AC115939.8| Mus musculus chromosome 3, clone RP24-549I13, complete sequence Length = 178373 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 651 ttctactctactctactctat 671 ||||||||||||||||||||| Sbjct: 172943 ttctactctactctactctat 172923
>gb|AC164629.14| Mus musculus 10 BAC RP23-16N3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221874 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 85579 gcagcagcagaagcagcagga 85559 Score = 42.1 bits (21), Expect = 2.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 147 gcagcagcagaagcagcagga 167 ||||||||||||||||||||| Sbjct: 85822 gcagcagcagaagcagcagga 85802 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 106,716,197 Number of extensions: 6560420 Number of successful extensions: 209558 Number of sequences better than 10.0: 139 Number of HSP's gapped: 209539 Number of HSP's successfully gapped: 148 Length of query: 714 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 692 Effective length of database: 18,508,616,841 Effective search space: 12807962853972 Effective search space used: 12807962853972 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
