ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92e19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os11g0634500:Os11g0634500 128 2e-30
2AK059123:Os12g0508300 128 2e-30
3AK105263:Os08g0502000 29 1.2
4AK065494:Os01g0631700 28 2.1
5AK101954:Os08g0503800 28 2.7
6AF261275:Os03g0102700 27 4.7
7AK108671:Os08g0128700 27 7.9
8Os02g0631500:Os02g0631500 27 8.0

>Os11g0634500:Os11g0634500 |
          Length = 56
 Score =  128 bits (321), Expect = 2e-30
 Identities = 55/56 (98%), Positives = 55/56 (98%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 240
           MGHSNVWNSHPKNYGPGSRVCRVCGN HGLIRKYGLMCCRQCFRSNAKDIGFIKYR
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56



to top

>AK059123:Os12g0508300 |
          Length = 56

 Score =  128 bits (321), Expect = 2e-30
 Identities = 55/56 (98%), Positives = 55/56 (98%)
 Frame = +1

Query: 73  MGHSNVWNSHPKNYGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 240
           MGHSNVWNSHPKNYGPGSRVCRVCGN HGLIRKYGLMCCRQCFRSNAKDIGFIKYR
Sbjct: 1   MGHSNVWNSHPKNYGPGSRVCRVCGNPHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 56



to top

>AK105263:Os08g0502000 |
          Length = 694

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = +1

Query: 16  IELASRRSPERKHSEAEKTMGH--SNVW 93
           + L SR    RKH E  KTMGH   NVW
Sbjct: 357 LSLWSRSDWARKHKEIAKTMGHISKNVW 384



to top

>AK065494:Os01g0631700 |
          Length = 509

 Score = 28.5 bits (62), Expect = 2.1
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
 Frame = +1

Query: 40  PERKHSEAE--KTMGHSNVW-NSHPKNYGPGSRVCRV 141
           P+ KH+  E  KT+GH  +  +S P N   GS VC V
Sbjct: 91  PQDKHTNREPGKTLGHMALSKSSEPDNMSQGSSVCNV 127



to top

>AK101954:Os08g0503800 |
          Length = 533

 Score = 28.1 bits (61), Expect = 2.7
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +3

Query: 15  HRTREPPFTRKEALGSGEDDGSLQRVELPPQELRPRIPRLPGLWQLPWADQEI 173
           H   +P     +A G G   G++ RV +     +   PRLP    LPW    +
Sbjct: 55  HPAADPERDAVDAAGGGGGGGAVDRVRVEAPSSQKPWPRLPSF--LPWTSASV 105



to top

>AF261275:Os03g0102700 |
          Length = 327

 Score = 27.3 bits (59), Expect = 4.7
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 149 TPMG*SGNMGSCAAGSASVATPRILASSSTVEDCSLSSPGS 271
           TP G SGN  S ++ S++ + P  +A + T     + SPG+
Sbjct: 38  TPGGISGNASSSSSNSSTPSIPPPVAPTPTAPTPPIPSPGT 78



to top

>AK108671:Os08g0128700 |
          Length = 370

 Score = 26.6 bits (57), Expect = 7.9
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 27  EPPFTRKEALGSGEDDGSLQRVELPPQEL 113
           EP  ++  AL   E   +L+ +E+PP E+
Sbjct: 153 EPKVSKTRALCDAETSSALREIEVPPMEI 181



to top

>Os02g0631500:Os02g0631500 |
          Length = 1190

 Score = 26.6 bits (57), Expect = 8.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 215 RILASSSTVEDCSLSSPGSEKRILHKIFNL 304
           R L    TVE C L+S  S K+++  +FN+
Sbjct: 483 RDLIDQLTVEFCYLNSKASRKKLVRTLFNV 512


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 12,520,929
Number of extensions: 273699
Number of successful extensions: 864
Number of sequences better than 10.0: 8
Number of HSP's gapped: 864
Number of HSP's successfully gapped: 8
Length of query: 153
Length of database: 15,399,855
Length adjustment: 92
Effective length of query: 61
Effective length of database: 11,716,083
Effective search space: 714681063
Effective search space used: 714681063
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top