ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89d17 |
|---|---|
| Clone Library Name | barley_pub |
>P13240:DR206_PEA Disease resistance response protein 206 - Pisum sativum (Garden| pea) Length = 184 Score = 73.9 bits (180), Expect = 9e-13 Identities = 49/145 (33%), Positives = 77/145 (53%), Gaps = 6/145 (4%) Frame = +3 Query: 102 FFLHDVV----SGSNPTAVQIIKGP--ASSSNAFPGMAFGDTTVIDDALTETSSPTSAPV 263 F+ HD++ + +N T+ I+ P S + P FG+ V DD +T + S +S V Sbjct: 36 FYFHDILYNGKNAANATSA-IVAAPEGVSLTKLAPQSHFGNIIVFDDPITLSHSLSSKQV 94 Query: 264 GRAQGFYMMSSQSGMVLMMCVNFLLTTGDYNGSTLAVIGRDDIMTTTRELSVVGGTGKFR 443 GRAQGFY+ +++ + F+L + + G T+ G D I+ TR++SV GGTG F Sbjct: 95 GRAQGFYIYDTKNTYTSWLSFTFVLNSTHHQG-TITFAGADPIVAKTRDISVTGGTGDFF 153 Query: 444 MATGYVLWKTNSSKGADATIELDVY 518 M G T++ +G +A L VY Sbjct: 154 MHRGIATITTDAFEG-EAYFRLGVY 177
>Q5RDA3:CSTF2_PONPY Cleavage stimulation factor 64 kDa subunit - Pongo pygmaeus| (Orangutan) Length = 577 Score = 34.7 bits (78), Expect = 0.61 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Frame = +2 Query: 2 TGRIHPLSYHGSSRRCPPLP---------PPAHHLRGGHASPLLPPRRGLREQPDGGADH 154 TG + P Y G + PP+ PP H LRGG PL PR + E D Sbjct: 338 TGEVEPRGYLGPPHQGPPMHHVPGHESRGPPPHELRGG---PLPEPRPLMAEPRGPMLDQ 394 Query: 155 QGPGL 169 +GP L Sbjct: 395 RGPPL 399
>P33240:CSTF2_HUMAN Cleavage stimulation factor 64 kDa subunit - Homo sapiens (Human)| Length = 577 Score = 34.7 bits (78), Expect = 0.61 Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 9/65 (13%) Frame = +2 Query: 2 TGRIHPLSYHGSSRRCPPLP---------PPAHHLRGGHASPLLPPRRGLREQPDGGADH 154 TG + P Y G + PP+ PP H LRGG PL PR + E D Sbjct: 338 TGEVEPRGYLGPPHQGPPMHHVPGHESRGPPPHELRGG---PLPEPRPLMAEPRGPMLDQ 394 Query: 155 QGPGL 169 +GP L Sbjct: 395 RGPPL 399
>Q4VUF1:FOLX2_ELLLU Forkhead box protein L2 - Ellobius lutescens (Transcaucasian mole| vole) Length = 373 Score = 33.1 bits (74), Expect = 1.8 Identities = 18/51 (35%), Positives = 18/51 (35%), Gaps = 7/51 (13%) Frame = +2 Query: 32 GSSRRCPPLPPP-------AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 163 G PP PPP AHHL A P PP G P G P Sbjct: 274 GGPPAAPPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPSSP 324
>Q9YD20:RNP4_AERPE Ribonuclease P protein component 4 - Aeropyrum pernix| Length = 163 Score = 32.0 bits (71), Expect = 4.0 Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 8/61 (13%) Frame = +2 Query: 5 GRIHPLSYHGSSRRCPPLPPPA-HHLRGGHAS-------PLLPPRRGLREQPDGGADHQG 160 G IH Y R P+ PPA + GG S P PPR+G R+ GG G Sbjct: 100 GWIHRYPYRKGPRGGAPISPPAAEYGSGGRDSGEREDKGPQGPPRQGGRDNRQGGGHQGG 159 Query: 161 P 163 P Sbjct: 160 P 160
>Q6VFT5:FOXL2_RABIT Forkhead box protein L2 - Oryctolagus cuniculus (Rabbit)| Length = 384 Score = 32.0 bits (71), Expect = 4.0 Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%) Frame = +2 Query: 50 PPLPPP-------AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 163 PP PPP AHHL A P PP G P G P Sbjct: 291 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 335
>O88470:FOXL2_MOUSE Forkhead box protein L2 - Mus musculus (Mouse)| Length = 375 Score = 32.0 bits (71), Expect = 4.0 Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 7/45 (15%) Frame = +2 Query: 50 PPLPPP-------AHHLRGGHASPLLPPRRGLREQPDGGADHQGP 163 PP PPP AHHL A P PP G P G P Sbjct: 282 PPPPPPHPHPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASP 326
>Q7TSJ6:LATS2_MOUSE Serine/threonine-protein kinase LATS2 - Mus musculus (Mouse)| Length = 1042 Score = 31.6 bits (70), Expect = 5.2 Identities = 15/24 (62%), Positives = 15/24 (62%), Gaps = 2/24 (8%) Frame = +2 Query: 14 HPLS--YHGSSRRCPPLPPPAHHL 79 HPL Y GS RRCPP P P H L Sbjct: 457 HPLDVDYGGSERRCPPPPYPKHLL 480
>Q06AV5:ID4_PIG DNA-binding protein inhibitor ID-4 - Sus scrofa (Pig)| Length = 161 Score = 31.6 bits (70), Expect = 5.2 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +2 Query: 20 LSYHGSSRRCPPLPPPAHHLRGGHASPLLPPR---RGLREQPDGGADHQGPGLV 172 L H + R PP P P HH G P PPR L P G + QG ++ Sbjct: 108 LETHPALLRQPPPPAPPHHPAG--TCPAAPPRTPLTALNTDPAGAVNKQGDSIL 159
>P47928:ID4_HUMAN DNA-binding protein inhibitor ID-4 - Homo sapiens (Human)| Length = 161 Score = 31.6 bits (70), Expect = 5.2 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 3/54 (5%) Frame = +2 Query: 20 LSYHGSSRRCPPLPPPAHHLRGGHASPLLPPR---RGLREQPDGGADHQGPGLV 172 L H + R PP P P HH G P PPR L P G + QG ++ Sbjct: 108 LETHPALLRQPPPPAPPHHPAG--TCPAAPPRTPLTALNTDPAGAVNKQGDSIL 159
>Q8TFG9:YL61_SCHPO Uncharacterized serine/threonine-rich protein PB15E9.01c precursor -| Schizosaccharomyces pombe (Fission yeast) Length = 943 Score = 31.2 bits (69), Expect = 6.7 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 24/174 (13%) Frame = +3 Query: 123 SGSNPTA---VQIIKGPASSSNAFPGMAFGDTTVIDDALTETSSPT---SAPVGRAQGFY 284 SG N T+ + P S+S+A+P + + LT + PT + G A G Sbjct: 623 SGFNTTSGLPTSSVSTPLSNSSAYPSSGSSTFSRLSSTLTSSIIPTETFGSTSGSATGTR 682 Query: 285 MM-SSQSGMVLMMCVNFLLTTGDYNGSTLAV--------IGRDDIMTTTRELSVVGGTGK 437 SS G V+ T G+T V +I+T+T E + GTG Sbjct: 683 PTGSSSQGSVVPTTSTGSSVTSTGTGTTTGVTEVTETSTFETTEIITSTIEPTTASGTGG 742 Query: 438 FRMATG-----YVLWKTNSSKGADATIELDVYTTALNGTTTIDANA----PVSP 572 V T +++G E +T+ + TTTI PV+P Sbjct: 743 GNPTAAPTNEPTVTTGTETTEGTATYTEPTTFTSTFSFTTTIIGGTTTIIPVNP 796
>Q61572:FOXC1_MOUSE Forkhead box protein C1 - Mus musculus (Mouse)| Length = 553 Score = 31.2 bits (69), Expect = 6.7 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = +2 Query: 17 PLSYHGSSRRCPPLP-PPAHHLRGGHASPLLPPRRGLREQPDGGADHQGPGLV 172 PLS + PP P PP HH +G ++ RG P G A G GL+ Sbjct: 284 PLSLDAAEPAPPPQPAPPPHHSQGFSVDNIMTSLRG---SPQGSAAELGSGLL 333 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 121,855,796 Number of extensions: 2255934 Number of successful extensions: 7677 Number of sequences better than 10.0: 12 Number of HSP's gapped: 7639 Number of HSP's successfully gapped: 12 Length of query: 326 Length of database: 100,686,439 Length adjustment: 113 Effective length of query: 213 Effective length of database: 69,691,104 Effective search space: 14844205152 Effective search space used: 14844205152 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
