ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK120559:Os02g0633100 32 2.2

>AK120559:Os02g0633100 |
          Length = 1820
 Score = 32.0 bits (71), Expect = 2.2
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 4/48 (8%)
 Frame = +1

Query: 52   TTTRPAIPRPCSILGRPFRHE*AKEGRIRLRH-PAEV---DHGRCISP 183
            T  RPA+ R C +LG  +     KE R +LR  P+E+    H  C+ P
Sbjct: 1073 TNIRPAVSRVCDLLGIRYARYLEKEKRWKLRGLPSEISNSSHDNCVDP 1120


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 73,751,536
Number of extensions: 1711546
Number of successful extensions: 3957
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3954
Number of HSP's successfully gapped: 1
Length of query: 872
Length of database: 15,399,855
Length adjustment: 109
Effective length of query: 763
Effective length of database: 11,035,386
Effective search space: 8419999518
Effective search space used: 8419999518
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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