ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf92d09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q7TT36:GP125_MOUSE Probable G-protein coupled receptor 125 precu... 33 6.0
2Q8IWK6:GP125_HUMAN Probable G-protein coupled receptor 125 precu... 33 7.9

>Q7TT36:GP125_MOUSE Probable G-protein coupled receptor 125 precursor - Mus musculus|
           (Mouse)
          Length = 1310
 Score = 33.1 bits (74), Expect = 6.0
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
 Frame = -3

Query: 766 TIITTNRNAWVLLVSYCDKLT------------TKSTSTCEILKIIMHYPTRAVLVYCRI 623
           ++I  +  +W +LV+ C  +             T++ S C+ + II+HY T A +++  +
Sbjct: 775 SLIRISLKSWHMLVNLCFHILLTCVVFVGGITQTRNASVCQAVGIILHYSTLATVLWVGV 834

Query: 622 GVYNVY 605
              N+Y
Sbjct: 835 TARNIY 840



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>Q8IWK6:GP125_HUMAN Probable G-protein coupled receptor 125 precursor - Homo sapiens|
           (Human)
          Length = 1321

 Score = 32.7 bits (73), Expect = 7.9
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
 Frame = -3

Query: 766 TIITTNRNAWVLLVSYCDKL------------TTKSTSTCEILKIIMHYPTRAVLVYCRI 623
           ++I  +  +W +LV+ C  +             T++ S C+ + II+HY T A +++  +
Sbjct: 786 SLIRISLKSWHMLVNLCFHIFLTCVVFVGGITQTRNASICQAVGIILHYSTLATVLWVGV 845

Query: 622 GVYNVY 605
              N+Y
Sbjct: 846 TARNIY 851


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 459,622,627
Number of extensions: 10285178
Number of successful extensions: 21316
Number of sequences better than 10.0: 2
Number of HSP's gapped: 21301
Number of HSP's successfully gapped: 2
Length of query: 872
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 750
Effective length of database: 67,222,449
Effective search space: 50416836750
Effective search space used: 50416836750
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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