ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf92d09 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 77.8 bits (39), Expect = 2e-10 Identities = 75/87 (86%) Strand = Plus / Minus Query: 1065 aaataccaaaagatattatgaagtacaaatggatagatacaatatattcttgaaatagac 1124 |||||| |||| ||||||| |||| || |||||||| |||| |||||||||||||||| Sbjct: 40271 aaatactaaaaaatattataaagtgcagccggatagatccaatctattcttgaaatagac 40212 Query: 1125 aactcacacaaaatccatttccaaaaa 1151 |||||||||| | ||| |||||||||| Sbjct: 40211 aactcacacacactccctttccaaaaa 40185
>emb|X02595.1|CHTAATP1 T.aestivum chloroplast gene encoding ATP synthase CF-O subunit I & III Length = 2007 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 1065 aaataccaaaagatattatgaagtacaaatggatagatacaatatattcttgaaatagac 1124 |||||| |||| ||||||| |||| || |||||||| |||| |||||||||||||||| Sbjct: 734 aaatactaaaaaatattataaagtgcagccggatagatccaatctattcttgaaatagac 675 Query: 1125 aactcacacaaaatccatttccaaaaa 1151 ||||| |||| | ||| |||||||||| Sbjct: 674 aactcgcacacactccctttccaaaaa 648
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 69.9 bits (35), Expect = 4e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 1065 aaataccaaaagatattatgaagtacaaatggatagatacaatatattcttgaaatagac 1124 |||||| |||| ||||||| |||| || |||||||| |||| |||||||||||||||| Sbjct: 33415 aaatactaaaaaatattataaagtgcagccggatagatccaatctattcttgaaatagac 33356 Query: 1125 aactcacacaaaatccatttccaaaaa 1151 ||||| |||| | ||| |||||||||| Sbjct: 33355 aactcgcacacactccctttccaaaaa 33329
>gb|EF115542.1| Sorghum bicolor cultivar BTx623 chloroplast, complete genome Length = 140754 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 36024 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 35968
>gb|EF115541.1| Hordeum vulgare subsp. vulgare cultivar Morex chloroplast, complete genome Length = 136462 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 33543 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 33487
>gb|DQ645537.1| Zea luxurians mitochondrion, complete genome Length = 539368 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 227242 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 227186
>gb|DQ645538.1| Zea perennis mitochondrion, complete genome Length = 570354 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 29310 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 29366
>gb|DQ490953.1| Zea mays subsp. mays genotype CMS-T mitochondrion, complete genome Length = 535825 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Plus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 61046 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 61102
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 97414 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 97358
>dbj|AP006963.1| Saccharum spontaneum chloroplast gene for RNA polymerase betaII subunit, partial cds, strain: Jw385, clone: SJw-33kb Length = 381 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 148 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 92
>dbj|AP006962.1| Saccharum spontaneum chloroplast gene for RNA polymerase betaII subunit, partial cds, strain: Glagah, clone: SGl-33kb Length = 381 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 148 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 92
>dbj|AP006961.1| Saccharum officinarum chloroplast gene for RNA polymerase betaII subunit, partial cds, strain: Fiji40, clone: OFi-33kb Length = 381 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 148 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 92
>dbj|AP006960.1| Saccharum officinarum chloroplast gene for RNA polymerase betaII subunit, partial cds, strain: Badila, clone: OBa-33kb Length = 381 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 148 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 92
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 35278 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 35222
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 35280 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 35224
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 35787 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 35731
>gb|BT024124.1| Zea mays clone EL01N0450D02 mRNA sequence Length = 1622 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 921 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 865
>emb|AJ010573.1|HVU010573 Hordeum vulgare chloroplast gene encoding ATP synthase CFO subunit I, exon 1 (partial) and exon 2 Length = 962 Score = 65.9 bits (33), Expect = 7e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||| |||| ||||||||||||||||||||| |||| | ||| |||||||||| Sbjct: 122 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaaa 66
>dbj|AK242953.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090088P08, full insert sequence Length = 5661 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 4982 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 4927
>dbj|AK242773.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090053L15, full insert sequence Length = 3382 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 2702 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 2647
>dbj|AK241391.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065157F16, full insert sequence Length = 1885 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 1206 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 1151
>ref|NM_001071652.1| Oryza sativa (japonica cultivar-group) Os10g0527100 (Os10g0527100) mRNA, complete cds Length = 3220 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 2541 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 2486
>ref|NM_001058830.1| Oryza sativa (japonica cultivar-group) Os04g0235600 (Os04g0235600) mRNA, partial cds Length = 1537 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 276 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 221
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 18507 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 18452
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 32925 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 32870
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 32925 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 32870
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 32883 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 32828
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 146514 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 146459
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 31172 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 31117
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 106105 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 106050
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 10324780 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 10324725 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Plus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 19961676 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 19961731
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 9080282 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 9080227
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 27409623 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 27409568 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaa 1126 |||||||| |||||||||||| |||||||||| Sbjct: 31644994 ggatagatccaatatattcttaaaatagacaa 31644963
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 32924 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 32869
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 38208 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 38153
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 165016 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 164961
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 24367 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 24312
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 32857 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 32802
>dbj|AK121120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F07, full insert sequence Length = 3220 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 2541 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 2486
>dbj|AK110794.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-D06, full insert sequence Length = 1537 Score = 63.9 bits (32), Expect = 3e-06 Identities = 50/56 (89%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 |||||||| |||| ||||||||||||||||||||| |||| | ||| ||||||||| Sbjct: 276 ggatagatccaatctattcttgaaatagacaactcgcacacactccctttccaaaa 221
>dbj|AP008982.1| Triticum aestivum mitochondrial DNA, complete genome Length = 452528 Score = 60.0 bits (30), Expect = 4e-05 Identities = 33/34 (97%) Strand = Plus / Plus Query: 1028 tattgacctgattccctaggaaagagttgatggc 1061 |||||||||||||||| ||||||||||||||||| Sbjct: 106196 tattgacctgattccccaggaaagagttgatggc 106229
>dbj|AK242696.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090037M20, full insert sequence Length = 721 Score = 56.0 bits (28), Expect = 7e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacaca 1134 |||||||| |||| ||||||||||||||||||||| |||| Sbjct: 43 ggatagatccaatctattcttgaaatagacaactcgcaca 4
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 56.0 bits (28), Expect = 7e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacaca 1134 |||||||| |||| ||||||||||||||||||||| |||| Sbjct: 6647087 ggatagatccaatctattcttgaaatagacaactcgcaca 6647048
>dbj|AP004996.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0027A02 Length = 140402 Score = 56.0 bits (28), Expect = 7e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacaca 1134 |||||||| |||| ||||||||||||||||||||| |||| Sbjct: 81462 ggatagatccaatctattcttgaaatagacaactcgcaca 81423
>gb|DQ673255.1| Jasminum nudiflorum chloroplast, complete genome Length = 165121 Score = 54.0 bits (27), Expect = 0.003 Identities = 39/43 (90%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 14322 tattcttgaaataaacaactcacacacactccctttccaaaaa 14364
>gb|EF115543.1| Agrostis stolonifera cultivar Penn A-4 chloroplast, complete genome Length = 136584 Score = 50.1 bits (25), Expect = 0.041 Identities = 49/57 (85%) Strand = Plus / Minus Query: 1095 ggatagatacaatatattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||| || |||| ||||||||||||||||||||| |||| | ||| || ||||||| Sbjct: 33241 ggatatatccaatctattcttgaaatagacaactcgcacacactcccttcccaaaaa 33185
>gb|AC133450.6| Oryza sativa chromosome 3 BAC OSJNBa0072F13 genomic sequence, complete sequence Length = 150743 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1095 ggatagatacaatatattcttgaaatagacaa 1126 |||||||| |||||||||||| |||||||||| Sbjct: 126179 ggatagatccaatatattcttaaaatagacaa 126210
>gb|AC107207.9| Oryza sativa chromosome 3 BAC OSJNBb0106M04 genomic sequence, complete sequence Length = 133449 Score = 48.1 bits (24), Expect = 0.16 Identities = 30/32 (93%) Strand = Plus / Plus Query: 1095 ggatagatacaatatattcttgaaatagacaa 1126 |||||||| |||||||||||| |||||||||| Sbjct: 38118 ggatagatccaatatattcttaaaatagacaa 38149
>gb|AC004548.1| Homo sapiens PAC clone RP5-1182N3 from 7, complete sequence Length = 105127 Score = 48.1 bits (24), Expect = 0.16 Identities = 24/24 (100%) Strand = Plus / Minus Query: 601 atcaatatacattatacactccaa 624 |||||||||||||||||||||||| Sbjct: 9496 atcaatatacattatacactccaa 9473
>gb|DQ887676.1| Drimys granadensis chloroplast, complete genome Length = 160604 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13567 tattcttgaaatacacaactcgcacacactccctttccaaaaa 13609
>gb|DQ897681.1| Pelargonium x hortorum chloroplast, complete genome Length = 217942 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12416 tattcttgaaataaacaactcgcacacactccctttccaaaaa 12458
>gb|DQ226511.1| Morus indica chloroplast, complete genome Length = 158484 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13654 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13696
>gb|DQ923116.1| Platanus occidentalis plastid, complete genome Length = 161791 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 14496 tattcttgaaataaacaactcgcacacactccctttccaaaaa 14538
>gb|DQ864733.1| Citrus sinensis chloroplast, complete genome Length = 160129 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13738 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13780
>emb|AM087200.3| Lycopersicon esculentum complete chloroplast genome, cultivar IPA-6 Length = 155461 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12874 tattcttgaaataaacaactcgcacacactccctttccaaaaa 12916
>gb|DQ899947.1| Liriodendron tulipifera chloroplast, complete genome Length = 159886 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13960 tattcttgaaatacacaactcgcacacactccctttccaaaaa 14002
>gb|DQ898156.1| Daucus carota chloroplast, complete genome Length = 155911 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12812 tattcttgaaataaacaactcgcacacactccctttccaaaaa 12854
>gb|AC189190.1| Brassica rapa subsp. pekinensis clone KBrB002G19, complete sequence Length = 121186 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 63996 tattcttgaaatgaacaactcacacacactccctttccaaaaa 63954
>dbj|AP008956.1| Populus alba chloroplast DNA, complete genome Length = 156505 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 11539 tattcttgaaataaacaactcgcacacactccctttccaaaaa 11581
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 27115 tattcttgaaataaacaactcgcacacactccctttccaaaaa 27073
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 27228 tattcttgaaataaacaactcgcacacactccctttccaaaaa 27186
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 14461 tattcttgaaataaacaactcgcacacactccctttccaaaaa 14503
>gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence Length = 16653 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 3213 tattcttgaaataaacaactcgcacacactccctttccaaaaa 3255
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 21053 tattcttgaaataaacaactcgcacacactccctttccaaaaa 21011
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13011 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13053
>dbj|AP007232.1| Lactuca sativa chloroplast DNA, complete genome Length = 152765 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 27115 tattcttgaaataaacaactcgcacacactccctttccaaaaa 27073
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13223 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13265
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13286 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13328
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13288 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13330
>emb|AJ971663.1| Arabidopsis thaliana chloroplast partial atpF gene for ATPase I subu nit, exon 1, strain Wassilewskija (Ws-2) Length = 388 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 153 tattcttgaaatgaacaactcacacacactccctttccaaaaa 111
>emb|AJ971662.1| Arabidopsis thaliana chloroplast partial atpF gene for ATPase I subu nit, exon 1, strain Cape Verde Islands (Cvi-0) Length = 384 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 149 tattcttgaaatgaacaactcacacacactccctttccaaaaa 107
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 12303 tattcttgaaatgaacaactcacacacactccctttccaaaaa 12345
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13811 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13853
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13121 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13163
>emb|AJ627251.1| Nymphaea alba chloroplast, complete genome Length = 159930 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 14512 tattcttgaaatacacaactcgcacacactccctttccaaaaa 14554
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13253 tattcttgaaatacacaactcgcacacactccctttccaaaaa 13295
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13071 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13113
>dbj|AP000423.1| Arabidopsis thaliana chloroplast genomic DNA, complete sequence, strain:Columbia Length = 154478 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 12629 tattcttgaaatgaacaactcacacacactccctttccaaaaa 12671
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12871 tattcttgaaataaacaactcgcacacactccctttccaaaaa 12913
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12892 tattcttgaaataaacaactcgcacacactccctttccaaaaa 12934
>gb|DQ119058.1| Cucumis sativus chloroplast, complete genome Length = 155527 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13803 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13845
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 14047 tattcttgaaataaacaactcgcacacactccctttccaaaaa 14089
>emb|AJ879453.1| Acorus calamus chloroplast, complete genome Length = 153821 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 12958 tattcttgaaatacacaactcgcacacactccctttccaaaaa 13000
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Plus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 13010 tattcttgaaataaacaactcgcacacactccctttccaaaaa 13052
>gb|U13703.1|BOU13703 Brassica oleracea chloroplast ATP synthase CF-0 subunit I (atpF) gene, partial cds Length = 293 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| |||||||||||| | ||| |||||||||| Sbjct: 204 tattcttgaaatgaacaactcacacacactccctttccaaaaa 162
>gb|M10124.1|TOBCPATPB Tobacco chloroplast ATPase subunits I and III gene, complete cds, and ATPase subunit alpha, 5' end Length = 2550 Score = 46.1 bits (23), Expect = 0.64 Identities = 38/43 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 ||||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 1316 tattcttgaaataaacaactcgcacacactccctttccaaaaa 1274
>emb|AL672005.7| Mouse DNA sequence from clone RP23-401A9 on chromosome X, complete sequence Length = 123180 Score = 46.1 bits (23), Expect = 0.64 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1726 aaaaacaagcaaatatcagtgat 1748 ||||||||||||||||||||||| Sbjct: 105029 aaaaacaagcaaatatcagtgat 105007
>emb|CT990276.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 570 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 72 attcttgaaataaacaactcgcacacactccctttccaaaaa 113
>emb|CT990039.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 570 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 499 attcttgaaataaacaactcgcacacactccctttccaaaaa 458
>emb|CT990017.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 527 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 95 attcttgaaataaacaactcgcacacactccctttccaaaaa 136
>emb|CT989783.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 588 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 90 attcttgaaataaacaactcgcacacactccctttccaaaaa 131
>emb|CT989717.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 679 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 499 attcttgaaataaacaactcgcacacactccctttccaaaaa 458
>emb|CT989579.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 571 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 72 attcttgaaataaacaactcgcacacactccctttccaaaaa 113
>emb|CT989511.1| EST from a microgravity versus gravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 571 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 500 attcttgaaataaacaactcgcacacactccctttccaaaaa 459
>emb|CT987513.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 925 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 422 attcttgaaataaacaactcgcacacactccctttccaaaaa 463
>emb|CT986306.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 59 attcttgaaataaacaactcgcacacactccctttccaaaaa 100
>emb|CT986302.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 735 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 234 attcttgaaataaacaactcgcacacactccctttccaaaaa 275
>emb|CT984822.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 59 attcttgaaataaacaactcgcacacactccctttccaaaaa 100
>emb|CT984623.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 735 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 234 attcttgaaataaacaactcgcacacactccctttccaaaaa 275
>emb|CT983343.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 59 attcttgaaataaacaactcgcacacactccctttccaaaaa 100
>emb|CT981721.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 558 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 59 attcttgaaataaacaactcgcacacactccctttccaaaaa 100
>emb|CT980910.1| partial cDNA sequence from a Lambda ZAP II normalized full-length cDNA library of differentiating xylem from Eucalyptus gunnii Length = 923 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 422 attcttgaaataaacaactcgcacacactccctttccaaaaa 463
>emb|CT979634.1| EST from a gravity versus microgravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 573 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 72 attcttgaaataaacaactcgcacacactccctttccaaaaa 113
>emb|CT979502.1| EST from a gravity versus microgravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 572 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 500 attcttgaaataaacaactcgcacacactccctttccaaaaa 459
>emb|CT979350.1| EST from a gravity versus microgravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 573 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 501 attcttgaaataaacaactcgcacacactccctttccaaaaa 460
>emb|CT979217.1| EST from a gravity versus microgravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 571 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 72 attcttgaaataaacaactcgcacacactccctttccaaaaa 113
>emb|CT979058.1| EST from a gravity versus microgravity subtracted library from Eucalyptus globulus seedlings grown under 14, 28 and 45 days of clinostat conditions Length = 571 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 500 attcttgaaataaacaactcgcacacactccctttccaaaaa 459
>gb|DQ283086.1| Ichthyophis cf. peninsularis MW 375 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 2426 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1817 aattgatccaataaattttcatcaacaaaccaag 1850 |||||||||||| |||||| |||||| ||||||| Sbjct: 2258 aattgatccaattaattttgatcaacgaaccaag 2291
>gb|AY700972.1| Ichthyophis cf. malabarensis MW 1465 voucher MW 1465 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 540 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1817 aattgatccaataaattttcatcaacaaaccaag 1850 |||||||||||| |||||| |||||| ||||||| Sbjct: 372 aattgatccaattaattttgatcaacgaaccaag 405
>gb|AY700971.1| Ichthyophis cf. malabarensis MW 432 voucher MW 432 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 540 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1817 aattgatccaataaattttcatcaacaaaccaag 1850 |||||||||||| |||||| |||||| ||||||| Sbjct: 372 aattgatccaattaattttgatcaacgaaccaag 405
>gb|AC147329.2| Pan troglodytes BAC clone RP43-21F14 from 7, complete sequence Length = 189770 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 601 atcaatatacattatacactcc 622 |||||||||||||||||||||| Sbjct: 81104 atcaatatacattatacactcc 81125
>gb|AC145901.2| Pan troglodytes BAC clone RP43-9F20 from 7, complete sequence Length = 176187 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 601 atcaatatacattatacactcc 622 |||||||||||||||||||||| Sbjct: 33355 atcaatatacattatacactcc 33334
>gb|AC124745.4| Mus musculus BAC clone RP23-236O12 from 14, complete sequence Length = 143589 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 777 tttttaatctgaacctggagga 798 |||||||||||||||||||||| Sbjct: 27767 tttttaatctgaacctggagga 27788
>gb|AY326064.1| Kaloula conjuncta PNM/CMNH tRNA-Phe gene, partial sequence; 12S ribosomal RNA and tRNA-Val genes, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial genes for mitochondrial products Length = 2412 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1817 aattgatccaataaattttcatcaacaaaccaag 1850 |||||||||||| |||||| |||||| ||||||| Sbjct: 2278 aattgatccaattaattttgatcaacgaaccaag 2311
>gb|AY101225.1| Ichthyophis cf. malabarensis DJG-375 16S ribosomal RNA gene, partial sequence; mitochondrial gene for mitochondrial product Length = 540 Score = 44.1 bits (22), Expect = 2.5 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1817 aattgatccaataaattttcatcaacaaaccaag 1850 |||||||||||| |||||| |||||| ||||||| Sbjct: 372 aattgatccaattaattttgatcaacgaaccaag 405
>dbj|AK162020.1| Mus musculus 12 days embryo female mullerian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6820405O07 product:unclassifiable, full insert sequence Length = 3918 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 777 tttttaatctgaacctggagga 798 |||||||||||||||||||||| Sbjct: 1465 tttttaatctgaacctggagga 1444
>gb|AC090736.5| Homo sapiens chromosome 8, clone RP11-1126C1, complete sequence Length = 145832 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1717 agctgttttaaaaacaagcaaa 1738 |||||||||||||||||||||| Sbjct: 58907 agctgttttaaaaacaagcaaa 58886
>emb|AJ271079.2|OEL271079 Oenothera elata subsp. hookeri chloroplast plastome I, complete sequence Length = 163935 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Minus Query: 1109 tattcttgaaatagacaactcacacaaaatccatttccaaaa 1150 ||||||||||||| ||||||| |||| | ||| ||||||||| Sbjct: 53517 tattcttgaaataaacaactcgcacacactccctttccaaaa 53476
>gb|AC152504.2| Pan troglodytes BAC clone RP43-147M24 from chromosome 7, complete sequence Length = 178619 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Minus Query: 598 caaatcaatatacattatacac 619 |||||||||||||||||||||| Sbjct: 176763 caaatcaatatacattatacac 176742
>gb|AC151994.3| Mus musculus BAC clone RP23-188B20 from 14, complete sequence Length = 208952 Score = 44.1 bits (22), Expect = 2.5 Identities = 22/22 (100%) Strand = Plus / Plus Query: 777 tttttaatctgaacctggagga 798 |||||||||||||||||||||| Sbjct: 4012 tttttaatctgaacctggagga 4033
>gb|AY780259.1| Eucalyptus globulus subsp. globulus chloroplast, complete genome Length = 160286 Score = 44.1 bits (22), Expect = 2.5 Identities = 37/42 (88%) Strand = Plus / Plus Query: 1110 attcttgaaatagacaactcacacaaaatccatttccaaaaa 1151 |||||||||||| ||||||| |||| | ||| |||||||||| Sbjct: 14022 attcttgaaataaacaactcgcacacactccctttccaaaaa 14063 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 527,312,057 Number of extensions: 37683180 Number of successful extensions: 176323 Number of sequences better than 10.0: 121 Number of HSP's gapped: 176323 Number of HSP's successfully gapped: 124 Length of query: 2616 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 2593 Effective length of database: 18,503,978,556 Effective search space: 47980816395708 Effective search space used: 47980816395708 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 15 (30.2 bits)
