ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf89a16 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK102534:Os02g0591800 | 540 | e-154 | 2 | AK060611:Os02g0591800 | 540 | e-154 | 3 | AK108147: | 217 | 1e-56 | 4 | AK099977:Os01g0148400 | 84 | 3e-16 | 5 | AK060859:Os08g0155000 | 42 | 0.001 | 6 | AK099613:Os08g0155000 | 40 | 0.005 | 7 | AK121945:Os06g0137500 | 39 | 0.012 | 8 | AK072896:Os06g0137500 | 39 | 0.012 | 9 | AK120429:Os01g0278900 | 30 | 4.2 | 10 | Os10g0550700:Os10g0550700 | 30 | 5.4 | 11 | AK110117: | 29 | 7.1 | 12 | AK110270: | 29 | 9.3 | 13 | AK111454:Os01g0928400 | 29 | 9.3 |
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>AK102534:Os02g0591800 | Length = 331 Score = 540 bits (1391), Expect = e-154 Identities = 268/333 (80%), Positives = 285/333 (85%), Gaps = 15/333 (4%) Frame = +1 Query: 277 MAKKRKRSSDATAPAAIEKPDDSAPERPERTLFGFK-----DSAAEPASKDEGPF----- 426 MAKKRKRSSDA A A+EKPD+ AP+RPERTLFGFK D AE + EG Sbjct: 1 MAKKRKRSSDAAA--AVEKPDEFAPQRPERTLFGFKEKPADDEEAEAEAASEGEEDAAAA 58 Query: 427 -----FRNKEKVLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSKGSALNELVEL 591 FRNKEKVL+TCSRRI YRYRHLMQNVVSLLPHAKKDSKVESKQSKG+ALNEL+EL Sbjct: 59 AAAAPFRNKEKVLVTCSRRINYRYRHLMQNVVSLLPHAKKDSKVESKQSKGNALNELLEL 118 Query: 592 RSCSSCLFFECRKQKDLYLWMVKSPAGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFS 771 R+CSSCLFFECRKQKDLYLWMVKSP GPSVKFLVNAVHTMEELKLTGNHLKGSRPL+TFS Sbjct: 119 RNCSSCLFFECRKQKDLYLWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLITFS 178 Query: 772 SNFDQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVPHNEI 951 +NFD+QPHW+L+KEM+TQIFATPKDHRKAKPFHDHVFVFSIVDDH+WFRNYQISVPHNEI Sbjct: 179 TNFDEQPHWQLVKEMLTQIFATPKDHRKAKPFHDHVFVFSIVDDHVWFRNYQISVPHNEI 238 Query: 952 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLFENPFYVSPNQIRALEXXXXXXX 1131 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTL+ENPFYVSPNQIRALE Sbjct: 239 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKRKKAGK 298 Query: 1132 XXXXXXXXXXXXMHEMENTLEPDEFADLWKGED 1230 MHEMENTLEPDEFA+LWKGED Sbjct: 299 YAKKVKAKVRRKMHEMENTLEPDEFAELWKGED 331
>AK060611:Os02g0591800 | Length = 331 Score = 540 bits (1391), Expect = e-154 Identities = 268/333 (80%), Positives = 285/333 (85%), Gaps = 15/333 (4%) Frame = +1 Query: 277 MAKKRKRSSDATAPAAIEKPDDSAPERPERTLFGFK-----DSAAEPASKDEGPF----- 426 MAKKRKRSSDA A A+EKPD+ AP+RPERTLFGFK D AE + EG Sbjct: 1 MAKKRKRSSDAAA--AVEKPDEFAPQRPERTLFGFKEKPADDEEAEAEAASEGEEDAAAA 58 Query: 427 -----FRNKEKVLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSKGSALNELVEL 591 FRNKEKVL+TCSRRI YRYRHLMQNVVSLLPHAKKDSKVESKQSKG+ALNEL+EL Sbjct: 59 AAAAPFRNKEKVLVTCSRRINYRYRHLMQNVVSLLPHAKKDSKVESKQSKGNALNELLEL 118 Query: 592 RSCSSCLFFECRKQKDLYLWMVKSPAGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFS 771 R+CSSCLFFECRKQKDLYLWMVKSP GPSVKFLVNAVHTMEELKLTGNHLKGSRPL+TFS Sbjct: 119 RNCSSCLFFECRKQKDLYLWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLITFS 178 Query: 772 SNFDQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVPHNEI 951 +NFD+QPHW+L+KEM+TQIFATPKDHRKAKPFHDHVFVFSIVDDH+WFRNYQISVPHNEI Sbjct: 179 TNFDEQPHWQLVKEMLTQIFATPKDHRKAKPFHDHVFVFSIVDDHVWFRNYQISVPHNEI 238 Query: 952 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLFENPFYVSPNQIRALEXXXXXXX 1131 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTL+ENPFYVSPNQIRALE Sbjct: 239 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRALEKRKKAGK 298 Query: 1132 XXXXXXXXXXXXMHEMENTLEPDEFADLWKGED 1230 MHEMENTLEPDEFA+LWKGED Sbjct: 299 YAKKVKAKVRRKMHEMENTLEPDEFAELWKGED 331
>AK108147: | Length = 396 Score = 217 bits (553), Expect = 1e-56 Identities = 117/259 (45%), Positives = 167/259 (64%), Gaps = 21/259 (8%) Frame = +1 Query: 391 AAEPASKD---EGPFFRNKEKVLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSK 561 A PA++D E P RN++++L+ SR + R+RHL+ ++ SLLPH++KD+K+++K ++ Sbjct: 12 AGNPAARDADAEKP--RNRQRLLMLSSRGVTMRHRHLLNDLHSLLPHSRKDAKLDTK-TQ 68 Query: 562 GSALNELVELRSCSSCLFFECRKQKDLYLWMVKSPAGPSVKFLVNAVHTMEELKLTGNHL 741 S LNEL +L +C++ +FFE RK KDLY+W+ K P GP+VK VHT EEL TGN L Sbjct: 69 LSQLNELADLYNCNNVMFFEARKGKDLYVWLSKPPNGPTVKMHCQNVHTTEELNFTGNRL 128 Query: 742 KGSRPLLTFSSNFDQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIV-DDHIWFR 918 KGSRP+L+F ++FD+Q H +++KE++TQ F P RK KPF DHV F++ + +W R Sbjct: 129 KGSRPILSFDASFDKQAHTRVIKELLTQSFGVPPGSRKVKPFTDHVMSFTLAGNGKVWIR 188 Query: 919 NYQIS--------VPHNEIDKVDKGGL---------DKMTLVEVGPRFCLNPIKIFGGSF 1047 YQIS P + D L ++LVE+GPR L PI I GSF Sbjct: 189 CYQISEQEAAKHVKPTGDDTPADPKALPTVAGLKGETNISLVEIGPRLVLTPIVIQEGSF 248 Query: 1048 GGPTLFENPFYVSPNQIRA 1104 GGP ++EN +VSPNQIR+ Sbjct: 249 GGPIIYENKEFVSPNQIRS 267
>AK099977:Os01g0148400 | Length = 626 Score = 83.6 bits (205), Expect = 3e-16 Identities = 69/271 (25%), Positives = 125/271 (46%), Gaps = 5/271 (1%) Frame = +1 Query: 253 AEAPASHAMAKKRKRSSDATAPAAIEKPDDSAPERPERTLFGFKDSAAEPASKDEGPFFR 432 A +PA + ++R DA + R R G + A ++E Sbjct: 29 APSPAGGGGVEAKRRRKDAMGSSVSGSRSGGGGGRRLRHGRGRRARAFRRKLEEENKNSN 88 Query: 433 NKEK---VLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSKGSALNELVELRSCS 603 N+ + V+I + +I RY L++N+ LLP+ D + ++ +N ++ C+ Sbjct: 89 NRPRASNVVIAYTPNLIRRYGTLLRNISFLLPY---DGQGKAYACPSDKINVFLKWSRCN 145 Query: 604 SCLFFECRKQKDLYLW-MVKSPAGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNF 780 CLFFE + + + M + + FL+N E +++ K + PLL+FSSNF Sbjct: 146 FCLFFEWAEGDQMMICHMFNTLKEIHISFLINPAFLDESMEV-----KVTNPLLSFSSNF 200 Query: 781 DQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQI-SVPHNEIDK 957 + W L+KEM+ +F+ ++ +A ++VF+ D ++FR ++I S+P E + Sbjct: 201 VEDETWALVKEMLMMMFSPVQEDERAA---SDLYVFTKSRDSVYFRIFKITSIPAGESE- 256 Query: 958 VDKGGLDKMTLVEVGPRFCLNPIKIFGGSFG 1050 + + L EVG FCL + + G G Sbjct: 257 ------NSLVLDEVGLNFCLKLLDVHGAFVG 281
>AK060859:Os08g0155000 | Length = 293 Score = 42.0 bits (97), Expect = 0.001 Identities = 73/271 (26%), Positives = 116/271 (42%), Gaps = 13/271 (4%) Frame = +1 Query: 271 HAMAKKRKRSS-DATAPAAIEKPDDSAPERPERTLFGFKDSAAEPASKDE---GPFFRNK 438 H K+R R + D P E ++ R E L KDSA + D+ G R + Sbjct: 25 HYEKKRRLREALDEGKPIPTELRNEELALRREIDLED-KDSAVPRSLIDDEYAGAALR-E 82 Query: 439 EKVLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSKGSALNELVELRSCSS---- 606 K+L+T SR ++ + + P++++ ++ G ++E+VE SC S Sbjct: 83 PKILLTTSRNPSAPLTQFVKELKVVFPNSQRMNR------GGQVISEIVE--SCRSHDIT 134 Query: 607 --CLFFECRKQKDLYLWMVKSPAGPSVKF-LVNAV--HTMEELKLTGNHLKGSRPLLTFS 771 L E R Q D L + P GP+ F L+N V H +++ K G + L+ Sbjct: 135 DLVLVHEHRGQPD-GLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLIL-- 191 Query: 772 SNFDQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVPHNEI 951 NF + + ++ +F PK K + F+ DD+I FR H+ Sbjct: 192 DNFTTKTGERTAN-IVKHLFPVPKPDSK------RIITFANRDDYISFR-------HHVY 237 Query: 952 DKVDKGGLDKMTLVEVGPRFCLNPIKIFGGS 1044 +K GG + L EVGPRF L +I G+ Sbjct: 238 EK--HGGPKSLDLKEVGPRFELRLYQIKRGT 266
>AK099613:Os08g0155000 | Length = 249 Score = 39.7 bits (91), Expect = 0.005 Identities = 56/210 (26%), Positives = 92/210 (43%), Gaps = 9/210 (4%) Frame = +1 Query: 442 KVLITCSRRIIYRYRHLMQNVVSLLPHAKKDSKVESKQSKGSALNELVELRSCSS----- 606 K+L+T SR ++ + + P++++ ++ G ++E+VE SC S Sbjct: 40 KILLTTSRNPSAPLTQFVKELKVVFPNSQRMNR------GGQVISEIVE--SCRSHDITD 91 Query: 607 -CLFFECRKQKDLYLWMVKSPAGPSVKF-LVNAV--HTMEELKLTGNHLKGSRPLLTFSS 774 L E R Q D L + P GP+ F L+N V H +++ K G + L+ Sbjct: 92 LVLVHEHRGQPD-GLIVCHLPFGPTAYFGLLNVVTRHDIKDRKAMGKMSEAYPHLIL--D 148 Query: 775 NFDQQPHWKLLKEMITQIFATPKDHRKAKPFHDHVFVFSIVDDHIWFRNYQISVPHNEID 954 NF + + ++ +F PK K + F+ DD+I FR H+ + Sbjct: 149 NFTTKTGERTAN-IVKHLFPVPKPDSK------RIITFANRDDYISFR-------HHVYE 194 Query: 955 KVDKGGLDKMTLVEVGPRFCLNPIKIFGGS 1044 K GG + L EVGPRF L +I G+ Sbjct: 195 K--HGGPKSLDLKEVGPRFELRLYQIKRGT 222
>AK121945:Os06g0137500 | Length = 360 Score = 38.5 bits (88), Expect = 0.012 Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 18/262 (6%) Frame = +1 Query: 316 PAAIE---KPDDSAPERPERTLFGFKDSAAEPASKDEGPFFRNKEKVLITCSRRIIYRYR 486 P IE +PD++ ++ LF D+ A + + KVLIT R R Sbjct: 92 PRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQ----QTTPKVLITTCRFNSGRGP 147 Query: 487 HLMQNVVSLLPHA--KKDSKVESKQSKGSALNELVELRSCSSCLFFECRKQKDLYLWMVK 660 ++ ++ ++P++ K E K+ + E R +S + +++ L ++ Sbjct: 148 AFIEELMQVIPNSCYVKRGTYELKK-----IVEYANNRDFTSLVVVHTNRREPDALLIIN 202 Query: 661 SPAGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDQQPHWKLLKEMITQIFATP 840 PAGP+ F ++ + +++K GN +P L ++ + H + MI +F Sbjct: 203 LPAGPTAHFKLSKLILRKDIKNHGNPTS-HKPELVLNNFTTRLGH--RVGRMIQSLFPQE 259 Query: 841 KDHRKAKPFHDHVFVFSIVDDHIWFRN--YQISVPHNEIDKVDKGGLDKMT--------- 987 + R + V F D+I+FR+ Y + N+I DK + Sbjct: 260 PNFRGRR-----VVTFHNQRDYIFFRHHRYIFEMKENKIASKDKKAKTSESKSQPEKQVI 314 Query: 988 --LVEVGPRFCLNPIKIFGGSF 1047 L E GPRF L + + G+F Sbjct: 315 CRLQECGPRFTLKLLTLQHGTF 336
>AK072896:Os06g0137500 | Length = 392 Score = 38.5 bits (88), Expect = 0.012 Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 18/262 (6%) Frame = +1 Query: 316 PAAIE---KPDDSAPERPERTLFGFKDSAAEPASKDEGPFFRNKEKVLITCSRRIIYRYR 486 P IE +PD++ ++ LF D+ A + + KVLIT R R Sbjct: 92 PRTIENTREPDETVCRPDDQELFAGNDADEFNAVLKQ----QTTPKVLITTCRFNSGRGP 147 Query: 487 HLMQNVVSLLPHA--KKDSKVESKQSKGSALNELVELRSCSSCLFFECRKQKDLYLWMVK 660 ++ ++ ++P++ K E K+ + E R +S + +++ L ++ Sbjct: 148 AFIEELMQVIPNSCYVKRGTYELKK-----IVEYANNRDFTSLVVVHTNRREPDALLIIN 202 Query: 661 SPAGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDQQPHWKLLKEMITQIFATP 840 PAGP+ F ++ + +++K GN +P L ++ + H + MI +F Sbjct: 203 LPAGPTAHFKLSKLILRKDIKNHGNPTS-HKPELVLNNFTTRLGH--RVGRMIQSLFPQE 259 Query: 841 KDHRKAKPFHDHVFVFSIVDDHIWFRN--YQISVPHNEIDKVDKGGLDKMT--------- 987 + R + V F D+I+FR+ Y + N+I DK + Sbjct: 260 PNFRGRR-----VVTFHNQRDYIFFRHHRYIFEMKENKIASKDKKAKTSESKSQPEKQVI 314 Query: 988 --LVEVGPRFCLNPIKIFGGSF 1047 L E GPRF L + + G+F Sbjct: 315 CRLQECGPRFTLKLLTLQHGTF 336
>AK120429:Os01g0278900 | Length = 143 Score = 30.0 bits (66), Expect = 4.2 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +1 Query: 247 LSAEAPASHAMAKKRKRSSDATAPAAIEKPDDSAPERPERTL 372 LS+++P + + KKR S A+A A E+ PE P+ T+ Sbjct: 45 LSSQSPLNASFTKKRLVSVHASAEAGAEEAGTDQPEEPKPTV 86
>Os10g0550700:Os10g0550700 | Length = 1369 Score = 29.6 bits (65), Expect = 5.4 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = +3 Query: 783 PAASLEAIEGNDNTNFCYTKRSSEGETFS*SCVCLLHC 896 PA S++A+ GN + + + R S + FS C+CLLHC Sbjct: 960 PAISMKAV-GNGHFSVDFHARLSALQAFS-VCICLLHC 995
>AK110117: | Length = 1028 Score = 29.3 bits (64), Expect = 7.1 Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Frame = +1 Query: 250 SAEAPASHAMAKKRKRSSDATAPAAIEKPDDS------APERPERTLFGFKDSAAEPASK 411 S A + MA++R+ S DATA +A+ DD+ ++ R S+A P+S Sbjct: 587 SVSAVMAARMAQRRRASDDATASSALPAADDANTMRRGVVDKAMRRRLSASTSSAVPSSP 646 Query: 412 DEGP 423 P Sbjct: 647 GASP 650
>AK110270: | Length = 310 Score = 28.9 bits (63), Expect = 9.3 Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%) Frame = +1 Query: 253 AEAPASHAMAKKRKRSSDATAPAAIEKP-DDSAPERPERTLFGFKDSAAEPASKDEGP 423 A APA A KK + + A AP P +AP++ E K +AA+PA+K P Sbjct: 233 AAAPAKAAAPKKEE--TKAAAPVKAAAPVKAAAPKKEETKAAAPKAAAAKPAAKAAAP 288
>AK111454:Os01g0928400 | Length = 307 Score = 28.9 bits (63), Expect = 9.3 Identities = 14/32 (43%), Positives = 15/32 (46%) Frame = +1 Query: 307 ATAPAAIEKPDDSAPERPERTLFGFKDSAAEP 402 ATAPAA P S P PE +F K P Sbjct: 123 ATAPAAAAAPSSSTPTAPELDVFAAKQYNGRP 154 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 37,894,213 Number of extensions: 840882 Number of successful extensions: 2568 Number of sequences better than 10.0: 13 Number of HSP's gapped: 2559 Number of HSP's successfully gapped: 13 Length of query: 469 Length of database: 15,399,855 Length adjustment: 104 Effective length of query: 365 Effective length of database: 11,235,591 Effective search space: 4100990715 Effective search space used: 4100990715 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
