No.
Definition
Score (bits)
E Value
1 gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome...
196
4e-46
2 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
196
4e-46
3 ref|NM_001075017.1| Oryza sativa (japonica cultivar-group) Os11g...
153
5e-33
4 ref|NM_001075016.1| Oryza sativa (japonica cultivar-group) Os11g...
139
8e-29
5 dbj|AK103659.1| Oryza sativa (japonica cultivar-group) cDNA clon...
139
8e-29
6 gb|AC121328.3| Oryza sativa (japonica cultivar-group) chromosome...
109
7e-20
7 ref|NM_001074785.1| Oryza sativa (japonica cultivar-group) Os11g...
107
3e-19
8 gb|AC114012.5| Oryza sativa (japonica cultivar-group) chromosome...
98
3e-16
9 ref|NM_001074427.1| Oryza sativa (japonica cultivar-group) Os11g...
96
1e-15
10 dbj|AK064142.1| Oryza sativa (japonica cultivar-group) cDNA clon...
96
1e-15
11 ref|NM_001074783.1| Oryza sativa (japonica cultivar-group) Os11g...
86
1e-12
12 dbj|AK065351.1| Oryza sativa (japonica cultivar-group) cDNA clon...
86
1e-12
13 ref|NM_001074777.1| Oryza sativa (japonica cultivar-group) Os11g...
78
2e-10
14 dbj|AK119331.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
2e-10
15 ref|NM_001075019.1| Oryza sativa (japonica cultivar-group) Os11g...
74
4e-09
16 gb|AC145395.3| Oryza sativa (japonica cultivar-group) chromosome...
74
4e-09
17 dbj|AK108692.1| Oryza sativa (japonica cultivar-group) cDNA clon...
74
4e-09
18 dbj|AK073759.1| Oryza sativa (japonica cultivar-group) cDNA clon...
74
4e-09
19 dbj|AK242972.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
60
6e-05
20 dbj|AK242729.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
60
6e-05
21 ref|NM_001070639.1| Oryza sativa (japonica cultivar-group) Os10g...
60
6e-05
22 ref|NM_001070638.1| Oryza sativa (japonica cultivar-group) Os10g...
60
6e-05
23 ref|NM_001063434.1| Oryza sativa (japonica cultivar-group) Os06g...
60
6e-05
24 gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome...
60
6e-05
25 gb|AC099734.5| Oryza sativa (japonica cultivar-group) chromosome...
60
6e-05
26 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
60
6e-05
27 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
60
6e-05
28 dbj|AP002536.2| Oryza sativa (japonica cultivar-group) genomic D...
60
6e-05
29 dbj|AK102733.1| Oryza sativa (japonica cultivar-group) cDNA clon...
60
6e-05
30 ref|NM_001074914.1| Oryza sativa (japonica cultivar-group) Os11g...
58
2e-04
31 gb|AC145775.2| Oryza sativa (japonica cultivar-group) chromosome...
58
2e-04
32 gb|AC129225.2| Oryza sativa (japonica cultivar-group) chromosome...
58
2e-04
33 dbj|AK119392.1| Oryza sativa (japonica cultivar-group) cDNA clon...
58
2e-04
34 gb|AC135644.2| Oryza sativa (japonica cultivar-group) chromosome...
56
0.001
35 ref|NM_001072999.1| Oryza sativa (japonica cultivar-group) Os12g...
52
0.014
36 ref|NM_001075011.1| Oryza sativa (japonica cultivar-group) Os11g...
52
0.014
37 ref|NM_001075001.1| Oryza sativa (japonica cultivar-group) Os11g...
52
0.014
38 ref|NM_001074173.1| Oryza sativa (japonica cultivar-group) Os11g...
52
0.014
39 ref|NM_001074172.1| Oryza sativa (japonica cultivar-group) Os11g...
52
0.014
40 ref|NM_001062383.1| Oryza sativa (japonica cultivar-group) Os05g...
52
0.014
41 ref|NM_001049471.1| Oryza sativa (japonica cultivar-group) Os01g...
52
0.014
42 gb|AC145364.2| Oryza sativa (japonica cultivar-group) chromosome...
52
0.014
43 gb|AC135190.2| Oryza sativa (japonica cultivar-group) chromosome...
52
0.014
44 gb|AC144737.2| Oryza sativa (japonica cultivar-group) chromosome...
52
0.014
45 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.014
46 dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.014
47 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
52
0.014
48 dbj|AP003208.3| Oryza sativa (japonica cultivar-group) genomic D...
52
0.014
49 dbj|AK070856.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.014
50 dbj|AK068195.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.014
51 dbj|AK066086.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.014
52 emb|AL731872.2|CNS08C8C Oryza sativa chromosome 12, . BAC OJ1003...
52
0.014
53 ref|NM_001074917.1| Oryza sativa (japonica cultivar-group) Os11g...
50
0.056
54 ref|NM_001074784.1| Oryza sativa (japonica cultivar-group) Os11g...
50
0.056
55 ref|NM_001067644.1| Oryza sativa (japonica cultivar-group) Os08g...
50
0.056
56 gb|AC129224.2| Oryza sativa (japonica cultivar-group) chromosome...
50
0.056
57 dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...
50
0.056
58 dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic D...
50
0.056
59 dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic D...
50
0.056
60 dbj|AP005828.2| Oryza sativa (japonica cultivar-group) genomic D...
50
0.056
61 dbj|AK119407.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.056
62 dbj|AK105448.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.056
63 dbj|AK071471.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.056
64 ref|NM_001070991.1| Oryza sativa (japonica cultivar-group) Os10g...
48
0.22
65 gb|DQ903592.1| Ipomoea batata isolate S5_D03 resistance gene ana...
48
0.22
66 gb|DQ903523.1| Ipomoea batata isolate S3_G12 resistance gene ana...
48
0.22
67 gb|AY327045.1| Oryza sativa (japonica cultivar-group) disease-re...
48
0.22
68 gb|AC113335.1| Genomic sequence for Oryza sativa (japonica culti...
48
0.22
69 gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar N...
48
0.22
70 gb|AY849874.1| Saccharum officinarum clone RGA-Q5 resistance gen...
48
0.22
71 dbj|AK100740.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.22
72 ref|NM_001069729.1| Oryza sativa (japonica cultivar-group) Os09g...
46
0.87
73 ref|NM_001067766.1| Oryza sativa (japonica cultivar-group) Os08g...
46
0.87
74 gb|AC084023.8| Oryza sativa (japonica cultivar-group) chromosome...
46
0.87
75 gb|AC109832.2| Oryza sativa (japonica cultivar-group) chromosome...
46
0.87
76 gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome...
46
0.87
77 gb|AC078840.6| Oryza sativa chromosome 10 BAC OSJNBb0073N24 geno...
46
0.87
78 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
79 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
80 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
81 gb|AC137072.2| Genomic sequence for Oryza sativa, Nipponbare str...
46
0.87
82 dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
83 dbj|AP007253.2| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
84 dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
85 dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
86 dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
87 dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
88 dbj|AP004565.3| Oryza sativa (japonica cultivar-group) genomic D...
46
0.87
89 dbj|AK119306.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.87
90 dbj|AK068795.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.87
91 dbj|AK242269.1| Oryza sativa (japonica cultivar-group) cDNA, clo...
44
3.5
92 ref|NM_001073545.1| Oryza sativa (japonica cultivar-group) Os12g...
44
3.5
93 ref|NM_001074103.1| Oryza sativa (japonica cultivar-group) Os11g...
44
3.5
94 ref|NM_001074069.1| Oryza sativa (japonica cultivar-group) Os11g...
44
3.5
95 ref|NM_001066101.1| Oryza sativa (japonica cultivar-group) Os07g...
44
3.5
96 ref|NM_001053064.1| Oryza sativa (japonica cultivar-group) Os02g...
44
3.5
97 ref|XM_638545.2| Dictyostelium discoideum AX4 hypothetical prote...
44
3.5
98 gb|AC145809.3| Oryza sativa (japonica cultivar-group) chromosome...
44
3.5
99 gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete s...
44
3.5
100 gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete se...
44
3.5
101 gb|AC137113.4| Oryza sativa (japonica cultivar-group) chromosome...
44
3.5
102 ref|NM_203543.1| Xenopus tropicalis diazepam binding inhibitor (...
44
3.5
103 gb|AC108428.13| Mus musculus chromosome 3, clone RP23-145M5, com...
44
3.5
104 gb|AC114258.3| Dictyostelium discoideum chromosome 2 map complem...
44
3.5
105 gb|AC121327.3| Oryza sativa (japonica cultivar-group) chromosome...
44
3.5
106 gb|AC148217.15| Medicago truncatula clone mth2-20c19, complete s...
44
3.5
107 gb|AC095029.3| Homo sapiens chromosome 3 clone RP11-208J17, comp...
44
3.5
108 gb|AC119072.1| Oryza sativa ssp. japonica cv. Nipponbare OSJNBa0...
44
3.5
109 emb|AL117203.1|CEY48C3A Caenorhabditis elegans YAC Y48C3A, compl...
44
3.5
110 gb|AC107624.1| Homo sapiens chromosome 3 clone RP11-744H21, comp...
44
3.5
111 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
44
3.5
112 gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4...
44
3.5
113 dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g...
44
3.5
114 dbj|AP005641.4| Oryza sativa (japonica cultivar-group) genomic D...
44
3.5
115 dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic D...
44
3.5
116 dbj|AP004771.3| Oryza sativa (japonica cultivar-group) genomic D...
44
3.5
117 dbj|AK111306.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
3.5
118 dbj|AK101376.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
3.5
119 dbj|AK072355.1| Oryza sativa (japonica cultivar-group) cDNA clon...
44
3.5
120 emb|CR942430.2| Xenopus tropicalis finished cDNA, clone TTpA006p08
44
3.5
121 gb|AY707080.1| Streptomyces turgidiscabies pathogenicity island ...
44
3.5
122 gb|AE017221.1| Thermus thermophilus HB27, complete genome
44
3.5
123 emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa...
44
3.5
124 emb|AL935070.3|CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa...
44
3.5
>gb|AC133216.2 | Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBb0049B20, complete sequence
Length = 131337
Score = 196 bits (99), Expect = 4e-46
Identities = 462/583 (79%)
Strand = Plus / Plus
Query: 1773 ttcaatcatctcataagaaggaagatcatccgaccagtggagcacagcagcaatgggaag 1832
||||| |||||| | || ||||||||||| || || ||||||||||||||||| || |||
Sbjct: 84061 ttcaaccatctcgtgaggaggaagatcatacgtcccgtggagcacagcagcaacggcaag 84120
Query: 1833 gtgaagaaatgcatagtgcacgacatggttcttgaacacattgtagccaaggcaagtgaa 1892
|||||||| ||| ||| || |||||||||||||| |||| || ||||||| ||||||
Sbjct: 84121 gtgaagaactgccaagtccatgacatggttcttgagtacatcgtgtccaaggcgagtgaa 84180
Query: 1893 gagaatttcatcactgtgattggtggtaactggcttatgcagctacctagcagcaaggtc 1952
||||| ||| | || ||| |||| || | ||||| |||| || ||| |||||||| ||
Sbjct: 84181 gagaacttcgtgacggtggttggagggtattggctcatgccgccacccagcagcaaagtg 84240
Query: 1953 cgccggctgtccctccaggaaagcgactccaaacgtgcaaatgatacagagaagatgaac 2012
||| ||||| || |||| | || |||||||||| | || ||||| | ||||||
Sbjct: 84241 cgcaggctggccatccaaagtggtgattccaaacgtggcagtggcacagacagcatgaac 84300
Query: 2013 ctgtctcatgtccggtcactgaccatgtttgggagtttgaaccaactgccttcccattca 2072
|| ||||||||||| ||||||||||||||||| || ||| ||| ||||| ||| |||||
Sbjct: 84301 ctatctcatgtccgatcactgaccatgtttggaagcctgagccagctgccatccaattca 84360
Query: 2073 tttaagtttggaattgtacaagtcctggatcttgaaggctgcatgggtttcaaaggacat 2132
|| ||||| |||||||| ||||| || ||||| |||| |||| |||||||||| |||
Sbjct: 84361 ttcaagttcggaattgttcaagtgcttgatctccaaggttgcaagggtttcaaacagcat 84420
Query: 2133 catacagaggagatatgcaaaatgcttcttctcaagtatctcagcctccgaagaactgac 2192
||||| ||||| ||||||| |||||||| |||||||||| ||||||||||| ||||||
Sbjct: 84421 cataccaaggagctatgcaacatgcttctaatcaagtatctaagcctccgaaggactgac 84480
Query: 2193 actaaacagcttccaaaagcgattggaaagcttgagaacctcgagactctggacattaga 2252
| ||| ||||||| ||| |||||| ||||| || | | |||| || ||||| ||
Sbjct: 84481 attaataagcttcctaaaaagattgggaagctacagtatttagagatccttgacataagg 84540
Query: 2253 gagacaaatgttgttgagttgcctaaaactgtatgcctgcttgaacggctggtaaacata 2312
||||||||||| || |||||| || ||| |||| |||||| || ||| ||||||
Sbjct: 84541 gagacaaatgtgacgaagctgcctagaagtgtctgccagcttgagcgagtggctaacata 84600
Query: 2313 cttggtgggaataaaagaacaagaagggcattgaagcttcctg 2355
|||||||| || ||| ||||||| | |||||||||||| ||||
Sbjct: 84601 cttggtggcaacaaacgaacaaggaaggcattgaagctccctg 84643
Score = 139 bits (70), Expect = 8e-29
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 399 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 458
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 71436 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 71495
Query: 459 gactgcatcgacgactcggcccaccgcctc 488
|||||||||||||||| || |||||||||
Sbjct: 71496 gactgcatcgacgacttcgcgcaccgcctc 71525
Score = 97.6 bits (49), Expect = 3e-16
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 537 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 596
|||||| |||||||||||||||||||||||||| ||||| |||| ||| | | ||||||
Sbjct: 71577 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 71636
Query: 597 atgcgggcgcagcagatcggggagcggcg 625
|||| ||||||||||||||| ||||||||
Sbjct: 71637 atgctggcgcagcagatcggcgagcggcg 71665
Score = 79.8 bits (40), Expect = 6e-11
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 824 cggcgtgctgtacgttgtcgggttcggcggggtggggaagaccaccattgccaccgccct 883
||||||||||| ||| |||| ||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 71842 cggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcact 71901
Query: 884 gtaccggaaatttggggaccaattcgaccaccgcgccatggtcaatgtgtctcagagctc 943
||||||| || | || || ||||| |||| ||| || ||||||| ||||| ||||||||
Sbjct: 71902 gtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctc 71961
Query: 944 cgac 947
||||
Sbjct: 71962 cgac 71965
Score = 71.9 bits (36), Expect = 2e-08
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 1603 gtcattgctacaatgacatgcccgctgacatcaagacctgctctctgtatttgagcatat 1662
|||||||||||||||| ||||| || || | | ||| ||||||||||| |||| ||||
Sbjct: 77545 gtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatat 77604
Query: 1663 ttccgaagggacagaaaatcagcaggaagcgtttgacaaggcggtggatagctgaagctt 1722
| ||||| || | || || ||||||||||| |||||||||| ||||||||||||| |
Sbjct: 77605 tcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggct 77664
Query: 1723 tcgttgctgagaagcagggcctgagtgtggaagacgttgc 1762
| || |||||||||||| | ||||||||| || |||||
Sbjct: 77665 ttgtcagtgagaagcaggggcagagtgtggaggatgttgc 77704
Score = 61.9 bits (31), Expect = 1e-05
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1247 cagaataatagttactacacggtttcaagctgttgctac 1285
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 77132 cagaataatagttaccacaaggtttcaagctgttgctac 77170
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1425 atgtgcggggggctgccgttggccatagttatcatggctggtcacgtggcctgcaac 1481
|||||| | ||||| || |||||||| || | |||||||||||||||||||||||||
Sbjct: 77391 atgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaac 77447
Score = 54.0 bits (27), Expect = 0.004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 2517 tcctcgatcgagtaccttgggggctactctctgcacactctcataatcgacgacg 2571
||||| ||||||||||| | ||||||||||||||||| ||| ||||||| ||||
Sbjct: 84862 tcctccatcgagtacctctgtggctactctctgcacaccctcgtaatcgaggacg 84916
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1512 gtctgtaaatctctatttccagagtc 1537
||||||||||||||| ||||||||||
Sbjct: 77478 gtctgtaaatctctagttccagagtc 77503
>dbj|AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
Length = 28386948
Score = 196 bits (99), Expect = 4e-46
Identities = 462/583 (79%)
Strand = Plus / Plus
Query: 1773 ttcaatcatctcataagaaggaagatcatccgaccagtggagcacagcagcaatgggaag 1832
||||| |||||| | || ||||||||||| || || ||||||||||||||||| || |||
Sbjct: 27030773 ttcaaccatctcgtgaggaggaagatcatacgtcccgtggagcacagcagcaacggcaag 27030832
Query: 1833 gtgaagaaatgcatagtgcacgacatggttcttgaacacattgtagccaaggcaagtgaa 1892
|||||||| ||| ||| || |||||||||||||| |||| || ||||||| ||||||
Sbjct: 27030833 gtgaagaactgccaagtccatgacatggttcttgagtacatcgtgtccaaggcgagtgaa 27030892
Query: 1893 gagaatttcatcactgtgattggtggtaactggcttatgcagctacctagcagcaaggtc 1952
||||| ||| | || ||| |||| || | ||||| |||| || ||| |||||||| ||
Sbjct: 27030893 gagaacttcgtgacggtggttggagggtattggctcatgccgccacccagcagcaaagtg 27030952
Query: 1953 cgccggctgtccctccaggaaagcgactccaaacgtgcaaatgatacagagaagatgaac 2012
||| ||||| || |||| | || |||||||||| | || ||||| | ||||||
Sbjct: 27030953 cgcaggctggccatccaaagtggtgattccaaacgtggcagtggcacagacagcatgaac 27031012
Query: 2013 ctgtctcatgtccggtcactgaccatgtttgggagtttgaaccaactgccttcccattca 2072
|| ||||||||||| ||||||||||||||||| || ||| ||| ||||| ||| |||||
Sbjct: 27031013 ctatctcatgtccgatcactgaccatgtttggaagcctgagccagctgccatccaattca 27031072
Query: 2073 tttaagtttggaattgtacaagtcctggatcttgaaggctgcatgggtttcaaaggacat 2132
|| ||||| |||||||| ||||| || ||||| |||| |||| |||||||||| |||
Sbjct: 27031073 ttcaagttcggaattgttcaagtgcttgatctccaaggttgcaagggtttcaaacagcat 27031132
Query: 2133 catacagaggagatatgcaaaatgcttcttctcaagtatctcagcctccgaagaactgac 2192
||||| ||||| ||||||| |||||||| |||||||||| ||||||||||| ||||||
Sbjct: 27031133 cataccaaggagctatgcaacatgcttctaatcaagtatctaagcctccgaaggactgac 27031192
Query: 2193 actaaacagcttccaaaagcgattggaaagcttgagaacctcgagactctggacattaga 2252
| ||| ||||||| ||| |||||| ||||| || | | |||| || ||||| ||
Sbjct: 27031193 attaataagcttcctaaaaagattgggaagctacagtatttagagatccttgacataagg 27031252
Query: 2253 gagacaaatgttgttgagttgcctaaaactgtatgcctgcttgaacggctggtaaacata 2312
||||||||||| || |||||| || ||| |||| |||||| || ||| ||||||
Sbjct: 27031253 gagacaaatgtgacgaagctgcctagaagtgtctgccagcttgagcgagtggctaacata 27031312
Query: 2313 cttggtgggaataaaagaacaagaagggcattgaagcttcctg 2355
|||||||| || ||| ||||||| | |||||||||||| ||||
Sbjct: 27031313 cttggtggcaacaaacgaacaaggaaggcattgaagctccctg 27031355
Score = 139 bits (70), Expect = 8e-29
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 399 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 458
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 27018148 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 27018207
Query: 459 gactgcatcgacgactcggcccaccgcctc 488
|||||||||||||||| || |||||||||
Sbjct: 27018208 gactgcatcgacgacttcgcgcaccgcctc 27018237
Score = 109 bits (55), Expect = 7e-20
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 257 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 316
|||||||||| |||||||||| |||||||||||||| || |||||| ||| |||| |
Sbjct: 22459338 caagctgggcagcctcctcgcgcaggagtacaccctcatctccggcgtccacgacgacat 22459279
Query: 317 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 359
||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 22459278 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22459236
Score = 107 bits (54), Expect = 3e-19
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 258 aagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctc 317
||||||||| |||||||||| ||||||||||||||||| |||||| || |||| ||
Sbjct: 22565456 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 22565515
Query: 318 cagtacatcaacgacgagctggccagcatgcagtccttcctc 359
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 22565516 cagtacatcaacgacgagctcgccagcatgcaggccttcctc 22565557
Score = 97.6 bits (49), Expect = 3e-16
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 207 atggagctggtggtgggagcttcggaggcgacgatgaagtccgtcatgggcaagctgggc 266
|||||| ||||||| || ||||||||||| || |||||| || || |||||||| ||||
Sbjct: 16218439 atggagttggtggtaggcgcttcggaggccaccatgaaggccctcctgggcaagttggga 16218498
Query: 267 ggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctccagtacatc 326
||||||||||||||||||| | || || |||| ||| ||||||| |||||||||||
Sbjct: 16218499 aacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgacatccagtacatc 16218558
Query: 327 aacgacgagctggccagcatgcagtccttcctc 359
| ||||||| |||||||||| || ||||||||
Sbjct: 16218559 agcgacgagatggccagcatccacgccttcctc 16218591
Score = 97.6 bits (49), Expect = 3e-16
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 537 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 596
|||||| |||||||||||||||||||||||||| ||||| |||| ||| | | ||||||
Sbjct: 27018289 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 27018348
Query: 597 atgcgggcgcagcagatcggggagcggcg 625
|||| ||||||||||||||| ||||||||
Sbjct: 27018349 atgctggcgcagcagatcggcgagcggcg 27018377
Score = 95.6 bits (48), Expect = 1e-15
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 414 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
|||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 16218640 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 16218699
Query: 474 tcggcccaccgcctcc 489
| |||||||| ||||
Sbjct: 16218700 ttcgcccaccgtctcc 16218715
Score = 85.7 bits (43), Expect = 1e-12
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 257 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 316
|||||||||| |||||| || |||||||||||||| || |||||| || |||| |
Sbjct: 22555137 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 22555196
Query: 317 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 359
||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 22555197 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 22555239
Score = 79.8 bits (40), Expect = 6e-11
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 824 cggcgtgctgtacgttgtcgggttcggcggggtggggaagaccaccattgccaccgccct 883
||||||||||| ||| |||| ||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 27018554 cggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcact 27018613
Query: 884 gtaccggaaatttggggaccaattcgaccaccgcgccatggtcaatgtgtctcagagctc 943
||||||| || | || || ||||| |||| ||| || ||||||| ||||| ||||||||
Sbjct: 27018614 gtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctc 27018673
Query: 944 cgac 947
||||
Sbjct: 27018674 cgac 27018677
Score = 77.8 bits (39), Expect = 2e-10
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 416 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 474
|||||||||| ||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 22524315 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 22524257
Score = 73.8 bits (37), Expect = 4e-09
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 406 accggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgca 465
|||||| |||||||||||||||||||||||| ||| || |||| ||| | ||||||||||
Sbjct: 27109172 accggaggaaggactggatgaagcagatccgagacgtcgcctatgacgttgaggactgca 27109231
Query: 466 tcgacgact 474
|||| ||||
Sbjct: 27109232 tcgatgact 27109240
Score = 71.9 bits (36), Expect = 2e-08
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | |||
Sbjct: 22524470 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 22524411
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 360
| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 22524410 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 22524363
Score = 71.9 bits (36), Expect = 2e-08
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 1603 gtcattgctacaatgacatgcccgctgacatcaagacctgctctctgtatttgagcatat 1662
|||||||||||||||| ||||| || || | | ||| ||||||||||| |||| ||||
Sbjct: 27024257 gtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatat 27024316
Query: 1663 ttccgaagggacagaaaatcagcaggaagcgtttgacaaggcggtggatagctgaagctt 1722
| ||||| || | || || ||||||||||| |||||||||| ||||||||||||| |
Sbjct: 27024317 tcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggct 27024376
Query: 1723 tcgttgctgagaagcagggcctgagtgtggaagacgttgc 1762
| || |||||||||||| | ||||||||| || |||||
Sbjct: 27024377 ttgtcagtgagaagcaggggcagagtgtggaggatgttgc 27024416
Score = 71.9 bits (36), Expect = 2e-08
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 316 tccagtacatcaacgacgagctggccagcatgcagtccttcctccgggacct 367
||||||||||||| |||||||| |||||||||||| |||||||||| |||||
Sbjct: 27109088 tccagtacatcaatgacgagcttgccagcatgcaggccttcctccgtgacct 27109139
Score = 69.9 bits (35), Expect = 6e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
||||||||||||||||| | ||||| || |||||||||||||||||||| ||||||||
Sbjct: 22555280 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 22555338
Score = 61.9 bits (31), Expect = 1e-05
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
||||||||||||||||| | ||||| || ||||||||||||||||||| ||||||||
Sbjct: 22459195 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 22459137
Score = 61.9 bits (31), Expect = 1e-05
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1247 cagaataatagttactacacggtttcaagctgttgctac 1285
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 27023844 cagaataatagttaccacaaggtttcaagctgttgctac 27023882
Score = 58.0 bits (29), Expect = 2e-04
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 419 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 467
||||||||||||| |||||||||||||||||| | ||| |||||||||
Sbjct: 25222729 ctggatgaagcaggtccgcgacatcacctacgtcgccgacgactgcatc 25222681
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1425 atgtgcggggggctgccgttggccatagttatcatggctggtcacgtggcctgcaac 1481
|||||| | ||||| || |||||||| || | |||||||||||||||||||||||||
Sbjct: 27024103 atgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaac 27024159
Score = 56.0 bits (28), Expect = 0.001
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 419 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 470
|||||||||| || | ||||| || ||||||||||||||||||||||||||
Sbjct: 26847825 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 26847876
Score = 56.0 bits (28), Expect = 0.001
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 419 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 470
|||||||||| || | ||||| || ||||||||||||||||||||||||||
Sbjct: 26848613 ctggatgaaggaggtgcgcgagctctcctacgacatcgaggactgcatcgac 26848562
Score = 54.0 bits (27), Expect = 0.004
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1680 atcagcaggaagcgtttgacaaggcggtggatagctgaagctttcgttgctgagaagca 1738
|||| ||||||||||||| ||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 22518892 atcaacaggaagcgtttggtcaggcgatggatagctgaaggtttcattgttgagaagca 22518834
Score = 54.0 bits (27), Expect = 0.004
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 2517 tcctcgatcgagtaccttgggggctactctctgcacactctcataatcgacgacg 2571
||||| ||||||||||| | ||||||||||||||||| ||| ||||||| ||||
Sbjct: 27031574 tcctccatcgagtacctctgtggctactctctgcacaccctcgtaatcgaggacg 27031628
Score = 54.0 bits (27), Expect = 0.004
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 838 ttgtcgggttcggcggggtggggaagaccaccattgcca 876
||||||| ||||| || ||||||||||||||||||||||
Sbjct: 27109610 ttgtcggtttcggtggtgtggggaagaccaccattgcca 27109648
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 445 cctacgacatcgaggactgcatcgacgact 474
||||||| ||||||||||||||||||||||
Sbjct: 8490511 cctacgatatcgaggactgcatcgacgact 8490482
Score = 52.0 bits (26), Expect = 0.014
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 2007 atgaacctgtctcatgtccggtcactgaccatgtttgggagtttgaaccaactgcctt 2064
||||||||||| |||||||| ||| | || |||||||||| |||||||| |||||||
Sbjct: 16235979 atgaacctgtcccatgtccgatcagtcacagtgtttgggagcttgaaccagctgcctt 16236036
Score = 52.0 bits (26), Expect = 0.014
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 445 cctacgacatcgaggactgcatcgac 470
||||||||||||||||||||||||||
Sbjct: 26824965 cctacgacatcgaggactgcatcgac 26824940
Score = 52.0 bits (26), Expect = 0.014
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 445 cctacgacatcgaggactgcatcgac 470
||||||||||||||||||||||||||
Sbjct: 26941577 cctacgacatcgaggactgcatcgac 26941552
Score = 50.1 bits (25), Expect = 0.056
Identities = 82/101 (81%)
Strand = Plus / Minus
Query: 1816 acagcagcaatgggaaggtgaagaaatgcatagtgcacgacatggttcttgaacacattg 1875
|||||||||||||||||||||||| || | | || |||||||| ||||| ||||||
Sbjct: 22455758 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22455699
Query: 1876 tagccaaggcaagtgaagagaatttcatcactgtgattggt 1916
| |||| | |||| ||||||||||||||||| ||||||
Sbjct: 22455698 tctccaaatctggtgaggagaatttcatcactgttattggt 22455658
Score = 50.1 bits (25), Expect = 0.056
Identities = 82/101 (81%)
Strand = Plus / Plus
Query: 1816 acagcagcaatgggaaggtgaagaaatgcatagtgcacgacatggttcttgaacacattg 1875
|||||||||||||||||||||||| || | | || |||||||| ||||| ||||||
Sbjct: 22557279 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 22557338
Query: 1876 tagccaaggcaagtgaagagaatttcatcactgtgattggt 1916
| |||| | |||| ||||||||||||||||| ||||||
Sbjct: 22557339 tctccaaatctggtgatgagaatttcatcactgtaattggt 22557379
Score = 50.1 bits (25), Expect = 0.056
Identities = 43/49 (87%)
Strand = Plus / Minus
Query: 419 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgcatc 467
||||||||||||| |||||||| ||||||||| | ||| |||||||||
Sbjct: 25329375 ctggatgaagcaggtccgcgacgtcacctacgtcgccgacgactgcatc 25329327
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1680 atcagcaggaagcgtttgacaaggcggtggatagctgaag 1719
|||||||||||||| ||||| ||||| |||||||| ||||
Sbjct: 16235649 atcagcaggaagcggttgacgaggcgatggatagcggaag 16235688
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 2154 atgcttcttctcaagtatctcagcctccgaagaactgaca 2193
|||||||||||||| ||||||| ||||||| |||| ||||
Sbjct: 16236126 atgcttcttctcaaatatctcaacctccgaggaacagaca 16236165
Score = 46.1 bits (23), Expect = 0.87
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 432 atccgcgacatcacctacgacatcgaggactgcatcgac 470
||||||||||| ||||||||||||||||| |||||||
Sbjct: 18333130 atccgcgacatgtcctacgacatcgaggacgccatcgac 18333092
Score = 46.1 bits (23), Expect = 0.87
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1893 gagaatttcatcactgtgattggtggtaactggct 1927
||||||||||||||||| |||||||| |||||||
Sbjct: 22508987 gagaatttcatcactgtagttggtggtcactggct 22508953
Score = 46.1 bits (23), Expect = 0.87
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 450 gacatcgaggactgcatcgacga 472
|||||||||||||||||||||||
Sbjct: 23809092 gacatcgaggactgcatcgacga 23809114
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 445 cctacgacatcgaggactgcatcgac 470
||||| ||||||||||||||||||||
Sbjct: 6476936 cctaccacatcgaggactgcatcgac 6476961
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 445 cctacgacatcgaggactgcat 466
||||||||||||||||||||||
Sbjct: 7260325 cctacgacatcgaggactgcat 7260346
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 445 cctacgacatcgaggactgcatcgac 470
|||||||||| |||||||||||||||
Sbjct: 15213304 cctacgacatggaggactgcatcgac 15213279
Score = 44.1 bits (22), Expect = 3.5
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacga 472
||||||||||||||||| | || || | ||||||||||| |||||||| |||||||
Sbjct: 22565601 aggactggatgaagcaggtgcgggaggtggcctacgacatcaaggactgcgtcgacga 22565658
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 445 cctacgacatcgaggactgcatcgac 470
|||||||||||||||| |||||||||
Sbjct: 23814058 cctacgacatcgaggattgcatcgac 23814083
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1512 gtctgtaaatctctatttccagagtc 1537
||||||||||||||| ||||||||||
Sbjct: 27024190 gtctgtaaatctctagttccagagtc 27024215
>ref|NM_001075016.1 | Oryza sativa (japonica cultivar-group) Os11g0687900 (Os11g0687900)
mRNA, complete cds
Length = 2325
Score = 139 bits (70), Expect = 8e-29
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 399 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 458
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 518 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 577
Query: 459 gactgcatcgacgactcggcccaccgcctc 488
|||||||||||||||| || |||||||||
Sbjct: 578 gactgcatcgacgacttcgcgcaccgcctc 607
Score = 97.6 bits (49), Expect = 3e-16
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 537 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 596
|||||| |||||||||||||||||||||||||| ||||| |||| ||| | | ||||||
Sbjct: 659 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 718
Query: 597 atgcgggcgcagcagatcggggagcggcg 625
|||| ||||||||||||||| ||||||||
Sbjct: 719 atgctggcgcagcagatcggcgagcggcg 747
Score = 79.8 bits (40), Expect = 6e-11
Identities = 103/124 (83%)
Strand = Plus / Plus
Query: 824 cggcgtgctgtacgttgtcgggttcggcggggtggggaagaccaccattgccaccgccct 883
||||||||||| ||| |||| ||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 924 cggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcact 983
Query: 884 gtaccggaaatttggggaccaattcgaccaccgcgccatggtcaatgtgtctcagagctc 943
||||||| || | || || ||||| |||| ||| || ||||||| ||||| ||||||||
Sbjct: 984 gtaccggcaactcggcgatcaatttgaccgccgggcgatggtcacggtgtcccagagctc 1043
Query: 944 cgac 947
||||
Sbjct: 1044 cgac 1047
Score = 71.9 bits (36), Expect = 2e-08
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 1603 gtcattgctacaatgacatgcccgctgacatcaagacctgctctctgtatttgagcatat 1662
|||||||||||||||| ||||| || || | | ||| ||||||||||| |||| ||||
Sbjct: 2102 gtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatat 2161
Query: 1663 ttccgaagggacagaaaatcagcaggaagcgtttgacaaggcggtggatagctgaagctt 1722
| ||||| || | || || ||||||||||| |||||||||| ||||||||||||| |
Sbjct: 2162 tcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggct 2221
Query: 1723 tcgttgctgagaagcagggcctgagtgtggaagacgttgc 1762
| || |||||||||||| | ||||||||| || |||||
Sbjct: 2222 ttgtcagtgagaagcaggggcagagtgtggaggatgttgc 2261
Score = 61.9 bits (31), Expect = 1e-05
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1247 cagaataatagttactacacggtttcaagctgttgctac 1285
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1689 cagaataatagttaccacaaggtttcaagctgttgctac 1727
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1425 atgtgcggggggctgccgttggccatagttatcatggctggtcacgtggcctgcaac 1481
|||||| | ||||| || |||||||| || | |||||||||||||||||||||||||
Sbjct: 1948 atgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaac 2004
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1512 gtctgtaaatctctatttccagagtc 1537
||||||||||||||| ||||||||||
Sbjct: 2035 gtctgtaaatctctagttccagagtc 2060
>dbj|AK103659.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033135H03, full
insert sequence
Length = 2323
Score = 139 bits (70), Expect = 8e-29
Identities = 85/90 (94%)
Strand = Plus / Plus
Query: 399 cacggccaccggatgaaggactggatgaagcagatccgcgacatcacctacgacatcgag 458
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 519 cacgaccaccggatgaaggactggatgaagcagatccgcgacgtcacctacgacatcgag 578
Query: 459 gactgcatcgacgactcggcccaccgcctc 488
|||||||||||||||| || |||||||||
Sbjct: 579 gactgcatcgacgacttcgcgcaccgcctc 608
Score = 97.6 bits (49), Expect = 3e-16
Identities = 79/89 (88%)
Strand = Plus / Plus
Query: 537 tacgaggtcctcacatggtggcctcgccgcgacgtcgccgccaagatctccgttctcaag 596
|||||| |||||||||||||||||||||||||| ||||| |||| ||| | | ||||||
Sbjct: 660 tacgagatcctcacatggtggcctcgccgcgacatcgcctccaacatcgcggagctcaag 719
Query: 597 atgcgggcgcagcagatcggggagcggcg 625
|||| ||||||||||||||| ||||||||
Sbjct: 720 atgctggcgcagcagatcggcgagcggcg 748
Score = 71.9 bits (36), Expect = 2e-08
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 1603 gtcattgctacaatgacatgcccgctgacatcaagacctgctctctgtatttgagcatat 1662
|||||||||||||||| ||||| || || | | ||| ||||||||||| |||| ||||
Sbjct: 2100 gtcattgctacaatgatatgcctgccgagctgaggacttgctctctgtacctgagtatat 2159
Query: 1663 ttccgaagggacagaaaatcagcaggaagcgtttgacaaggcggtggatagctgaagctt 1722
| ||||| || | || || ||||||||||| |||||||||| ||||||||||||| |
Sbjct: 2160 tcccgaaaggcaacaagattagcaggaagcggctgacaaggcgatggatagctgaaggct 2219
Query: 1723 tcgttgctgagaagcagggcctgagtgtggaagacgttgc 1762
| || |||||||||||| | ||||||||| || |||||
Sbjct: 2220 ttgtcagtgagaagcaggggcagagtgtggaggatgttgc 2259
Score = 61.9 bits (31), Expect = 1e-05
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 824 cggcgtgctgtacgttgtcgggttcggcggggtggggaagaccaccattgccaccgccct 883
||||||||||| ||| |||| ||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 924 cggcgtgctgtccgtcctcggtttcggaggggtggggaagacaaccatcgccacggcact 983
Query: 884 gtaccgg 890
|||||||
Sbjct: 984 gtaccgg 990
Score = 61.9 bits (31), Expect = 1e-05
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1247 cagaataatagttactacacggtttcaagctgttgctac 1285
||||||||||||||| ||| |||||||||||||||||||
Sbjct: 1687 cagaataatagttaccacaaggtttcaagctgttgctac 1725
Score = 58.0 bits (29), Expect = 2e-04
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 1425 atgtgcggggggctgccgttggccatagttatcatggctggtcacgtggcctgcaac 1481
|||||| | ||||| || |||||||| || | |||||||||||||||||||||||||
Sbjct: 1946 atgtgcagcgggcttccattggccattgtcaccatggctggtcacgtggcctgcaac 2002
Score = 44.1 bits (22), Expect = 3.5
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1512 gtctgtaaatctctatttccagagtc 1537
||||||||||||||| ||||||||||
Sbjct: 2033 gtctgtaaatctctagttccagagtc 2058
>gb|AC121328.3 | Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
OSJNBb0030E22, complete sequence
Length = 135468
Score = 109 bits (55), Expect = 7e-20
Identities = 91/103 (88%)
Strand = Plus / Minus
Query: 257 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 316
|||||||||| |||||||||| |||||||||||||| || |||||| ||| |||| |
Sbjct: 16483 caagctgggcagcctcctcgcgcaggagtacaccctcatctccggcgtccacgacgacat 16424
Query: 317 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 359
||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 16423 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 16381
Score = 107 bits (54), Expect = 3e-19
Identities = 90/102 (88%)
Strand = Plus / Plus
Query: 258 aagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctc 317
||||||||| |||||||||| ||||||||||||||||| |||||| || |||| ||
Sbjct: 122601 aagctgggcagcctcctcgcgcaggagtacaccctgatcgccggcgtccgcgacgacatc 122660
Query: 318 cagtacatcaacgacgagctggccagcatgcagtccttcctc 359
|||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 122661 cagtacatcaacgacgagctcgccagcatgcaggccttcctc 122702
Score = 85.7 bits (43), Expect = 1e-12
Identities = 88/103 (85%)
Strand = Plus / Plus
Query: 257 caagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacct 316
|||||||||| |||||| || |||||||||||||| || |||||| || |||| |
Sbjct: 112282 caagctgggcaccctcctggcgcaggagtacaccctcatctccggcgtccgcgacgacat 112341
Query: 317 ccagtacatcaacgacgagctggccagcatgcagtccttcctc 359
||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 112342 ccagtacatcaacgacgagctcgccagcatgcaggccttcctc 112384
Score = 77.8 bits (39), Expect = 2e-10
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 416 ggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgact 474
|||||||||| ||||| | |||||| || ||||||||||||||||||||||||||||||
Sbjct: 81460 ggactggatggagcaggtgcgcgacgtcgcctacgacatcgaggactgcatcgacgact 81402
Score = 71.9 bits (36), Expect = 2e-08
Identities = 90/108 (83%)
Strand = Plus / Minus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||| ||||| ||| ||||||| |||||||||||||| || || | ||||| | |||
Sbjct: 81615 tgggaaagctcggcagcctcctggcccaggagtacacgctcatcagcggcgttcgcagcg 81556
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcctcc 360
| ||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 81555 agatccagtacatcaaggacgagctggccagcatgcacgccttcctcc 81508
Score = 69.9 bits (35), Expect = 6e-08
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
||||||||||||||||| | ||||| || |||||||||||||||||||| ||||||||
Sbjct: 112425 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgcgtcgacgac 112483
Score = 61.9 bits (31), Expect = 1e-05
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
||||||||||||||||| | ||||| || ||||||||||||||||||| ||||||||
Sbjct: 16340 aggactggatgaagcaggtgcgcgaggtcgcctacgacatcgaggactgtgtcgacgac 16282
Score = 54.0 bits (27), Expect = 0.004
Identities = 51/59 (86%)
Strand = Plus / Minus
Query: 1680 atcagcaggaagcgtttgacaaggcggtggatagctgaagctttcgttgctgagaagca 1738
|||| ||||||||||||| ||||| ||||||||||||| |||| ||| |||||||||
Sbjct: 76037 atcaacaggaagcgtttggtcaggcgatggatagctgaaggtttcattgttgagaagca 75979
Score = 50.1 bits (25), Expect = 0.056
Identities = 82/101 (81%)
Strand = Plus / Minus
Query: 1816 acagcagcaatgggaaggtgaagaaatgcatagtgcacgacatggttcttgaacacattg 1875
|||||||||||||||||||||||| || | | || |||||||| ||||| ||||||
Sbjct: 12903 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 12844
Query: 1876 tagccaaggcaagtgaagagaatttcatcactgtgattggt 1916
| |||| | |||| ||||||||||||||||| ||||||
Sbjct: 12843 tctccaaatctggtgaggagaatttcatcactgttattggt 12803
Score = 50.1 bits (25), Expect = 0.056
Identities = 82/101 (81%)
Strand = Plus / Plus
Query: 1816 acagcagcaatgggaaggtgaagaaatgcatagtgcacgacatggttcttgaacacattg 1875
|||||||||||||||||||||||| || | | || |||||||| ||||| ||||||
Sbjct: 114424 acagcagcaatgggaaggtgaagagctgtcaaattcatgacatggtccttgagtacattg 114483
Query: 1876 tagccaaggcaagtgaagagaatttcatcactgtgattggt 1916
| |||| | |||| ||||||||||||||||| ||||||
Sbjct: 114484 tctccaaatctggtgatgagaatttcatcactgtaattggt 114524
Score = 46.1 bits (23), Expect = 0.87
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1893 gagaatttcatcactgtgattggtggtaactggct 1927
||||||||||||||||| |||||||| |||||||
Sbjct: 66132 gagaatttcatcactgtagttggtggtcactggct 66098
Score = 44.1 bits (22), Expect = 3.5
Identities = 49/58 (84%)
Strand = Plus / Plus
Query: 415 aggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacga 472
||||||||||||||||| | || || | ||||||||||| |||||||| |||||||
Sbjct: 122746 aggactggatgaagcaggtgcgggaggtggcctacgacatcaaggactgcgtcgacga 122803
>gb|AC114012.5 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0079H11, complete sequence
Length = 143925
Score = 97.6 bits (49), Expect = 3e-16
Identities = 127/153 (83%)
Strand = Plus / Plus
Query: 207 atggagctggtggtgggagcttcggaggcgacgatgaagtccgtcatgggcaagctgggc 266
|||||| ||||||| || ||||||||||| || |||||| || || |||||||| ||||
Sbjct: 83650 atggagttggtggtaggcgcttcggaggccaccatgaaggccctcctgggcaagttggga 83709
Query: 267 ggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcgacctccagtacatc 326
||||||||||||||||||| | || || |||| ||| ||||||| |||||||||||
Sbjct: 83710 aacctcctcgcccaggagtacgcgctcatcaggggtgtccgcggcgacatccagtacatc 83769
Query: 327 aacgacgagctggccagcatgcagtccttcctc 359
| ||||||| |||||||||| || ||||||||
Sbjct: 83770 agcgacgagatggccagcatccacgccttcctc 83802
Score = 95.6 bits (48), Expect = 1e-15
Identities = 69/76 (90%)
Strand = Plus / Plus
Query: 414 aaggactggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgacgac 473
|||||||||||||||||| ||||||||||| |||||||||| ||||||||| ||||||||
Sbjct: 83851 aaggactggatgaagcaggtccgcgacatcgcctacgacatggaggactgcgtcgacgac 83910
Query: 474 tcggcccaccgcctcc 489
| |||||||| ||||
Sbjct: 83911 ttcgcccaccgtctcc 83926
Score = 52.0 bits (26), Expect = 0.014
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 2007 atgaacctgtctcatgtccggtcactgaccatgtttgggagtttgaaccaactgcctt 2064
||||||||||| |||||||| ||| | || |||||||||| |||||||| |||||||
Sbjct: 100834 atgaacctgtcccatgtccgatcagtcacagtgtttgggagcttgaaccagctgcctt 100891
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1680 atcagcaggaagcgtttgacaaggcggtggatagctgaag 1719
|||||||||||||| ||||| ||||| |||||||| ||||
Sbjct: 100504 atcagcaggaagcggttgacgaggcgatggatagcggaag 100543
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 2154 atgcttcttctcaagtatctcagcctccgaagaactgaca 2193
|||||||||||||| ||||||| ||||||| |||| ||||
Sbjct: 100981 atgcttcttctcaaatatctcaacctccgaggaacagaca 101020
>dbj|AK242972.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J090091H21,
full insert sequence
Length = 3480
Score = 60.0 bits (30), Expect = 6e-05
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||||||||||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct: 241 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 300
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 358
|| |||||||||||| |||||||| ||||||||| || |||||||
Sbjct: 301 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 346
Score = 60.0 bits (30), Expect = 6e-05
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1854 gacatggttcttgaacacattgtagccaaggcaagtgaagagaatttcatcactgtgatt 1913
|||||||||||||| | ||||| |||||||||| ||||||||||| || |||||| ||
Sbjct: 1881 gacatggttcttgactatattgtgaccaaggcaagagaagagaattttattactgtggtt 1940
Query: 1914 ggtggt 1919
||||||
Sbjct: 1941 ggtggt 1946
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 413 gaaggactggatgaagcagatccgcgacat 442
|||| |||||||||||||||||||||||||
Sbjct: 383 gaagcactggatgaagcagatccgcgacat 412
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1443 ttggccatagttatcatggctggtcacgtggcctgcaacc 1482
||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1467 ttggccatagttaccatggctggtctagtggcgtgcaacc 1506
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 855 gtggggaagaccaccattgcca 876
||||||||||||||||||||||
Sbjct: 813 gtggggaagaccaccattgcca 834
>dbj|AK242729.1 | Oryza sativa (japonica cultivar-group) cDNA, clone: J090047B15,
full insert sequence
Length = 3480
Score = 60.0 bits (30), Expect = 6e-05
Identities = 87/106 (82%)
Strand = Plus / Plus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||||||||||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct: 241 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 300
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 358
|| |||||||||||| |||||||| ||||||||| || |||||||
Sbjct: 301 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 346
Score = 60.0 bits (30), Expect = 6e-05
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 1854 gacatggttcttgaacacattgtagccaaggcaagtgaagagaatttcatcactgtgatt 1913
|||||||||||||| | ||||| |||||||||| ||||||||||| || |||||| ||
Sbjct: 1881 gacatggttcttgactatattgtgaccaaggcaagagaagagaattttattactgtggtt 1940
Query: 1914 ggtggt 1919
||||||
Sbjct: 1941 ggtggt 1946
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 413 gaaggactggatgaagcagatccgcgacat 442
|||| |||||||||||||||||||||||||
Sbjct: 383 gaagcactggatgaagcagatccgcgacat 412
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 1443 ttggccatagttatcatggctggtcacgtggcctgcaacc 1482
||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1467 ttggccatagttaccatggctggtctagtggcgtgcaacc 1506
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 855 gtggggaagaccaccattgcca 876
||||||||||||||||||||||
Sbjct: 813 gtggggaagaccaccattgcca 834
>gb|AC145127.1 | Oryza sativa (japonica cultivar-group) chromosome 10 clone
Pseudo10p0.0-10p4.4, complete sequence
Length = 2331000
Score = 60.0 bits (30), Expect = 6e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1854 gacatggttcttgaacacattgtagccaaggcaagtgaagagaatttcatcactgtgatt 1913
|||||||||||||| | ||||| |||||||||| ||||||||||| || |||||| ||
Sbjct: 1930033 gacatggttcttgactatattgtgaccaaggcaagagaagagaattttattactgtggtt 1929974
Query: 1914 ggtggt 1919
||||||
Sbjct: 1929973 ggtggt 1929968
Score = 60.0 bits (30), Expect = 6e-05
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||||||||||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct: 1934630 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 1934571
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 358
|| |||||||||||| |||||||| ||||||||| || |||||||
Sbjct: 1934570 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 413 gaaggactggatgaagcagatccgcgacat 442
|||| |||||||||||||||||||||||||
Sbjct: 1934488 gaagcactggatgaagcagatccgcgacat 1934459
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1443 ttggccatagttatcatggctggtcacgtggcctgcaacc 1482
||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1930447 ttggccatagttaccatggctggtctagtggcgtgcaacc 1930408
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 855 gtggggaagaccaccattgcca 876
||||||||||||||||||||||
Sbjct: 1934058 gtggggaagaccaccattgcca 1934037
>gb|AC099734.5 | Oryza sativa (japonica cultivar-group) chromosome 10 clone
OSJNBb0004A06, complete sequence
Length = 153510
Score = 60.0 bits (30), Expect = 6e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1854 gacatggttcttgaacacattgtagccaaggcaagtgaagagaatttcatcactgtgatt 1913
|||||||||||||| | ||||| |||||||||| ||||||||||| || |||||| ||
Sbjct: 20762 gacatggttcttgactatattgtgaccaaggcaagagaagagaattttattactgtggtt 20703
Query: 1914 ggtggt 1919
||||||
Sbjct: 20702 ggtggt 20697
Score = 60.0 bits (30), Expect = 6e-05
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||||||||||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct: 25359 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 25300
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 358
|| |||||||||||| |||||||| ||||||||| || |||||||
Sbjct: 25299 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 25254
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 413 gaaggactggatgaagcagatccgcgacat 442
|||| |||||||||||||||||||||||||
Sbjct: 25217 gaagcactggatgaagcagatccgcgacat 25188
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1443 ttggccatagttatcatggctggtcacgtggcctgcaacc 1482
||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 21176 ttggccatagttaccatggctggtctagtggcgtgcaacc 21137
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 855 gtggggaagaccaccattgcca 876
||||||||||||||||||||||
Sbjct: 24787 gtggggaagaccaccattgcca 24766
>dbj|AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
Length = 22685906
Score = 60.0 bits (30), Expect = 6e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 1854 gacatggttcttgaacacattgtagccaaggcaagtgaagagaatttcatcactgtgatt 1913
|||||||||||||| | ||||| |||||||||| ||||||||||| || |||||| ||
Sbjct: 1930033 gacatggttcttgactatattgtgaccaaggcaagagaagagaattttattactgtggtt 1929974
Query: 1914 ggtggt 1919
||||||
Sbjct: 1929973 ggtggt 1929968
Score = 60.0 bits (30), Expect = 6e-05
Identities = 87/106 (82%)
Strand = Plus / Minus
Query: 253 tgggcaagctgggcggcctcctcgcccaggagtacaccctgattcggggcgtcaacggcg 312
|||||||||||||| ||| |||||||||||||| ||||| |||||||| || |
Sbjct: 1934630 tgggcaagctgggcaaccttctcgcccaggagtatgatctgatcaggggcgtccgtggtg 1934571
Query: 313 acctccagtacatcaacgacgagctggccagcatgcagtccttcct 358
|| |||||||||||| |||||||| ||||||||| || |||||||
Sbjct: 1934570 acatccagtacatcagtgacgagctcgccagcatgaaggccttcct 1934525
Score = 52.0 bits (26), Expect = 0.014
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 413 gaaggactggatgaagcagatccgcgacat 442
|||| |||||||||||||||||||||||||
Sbjct: 1934488 gaagcactggatgaagcagatccgcgacat 1934459
Score = 48.1 bits (24), Expect = 0.22
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 1443 ttggccatagttatcatggctggtcacgtggcctgcaacc 1482
||||||||||||| ||||||||||| ||||| |||||||
Sbjct: 1930447 ttggccatagttaccatggctggtctagtggcgtgcaacc 1930408
Score = 48.1 bits (24), Expect = 0.22
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 445 cctacgacatcgaggactgcatcgacga 472
|||||||||||||||||| |||||||||
Sbjct: 11143117 cctacgacatcgaggactacatcgacga 11143090
Score = 46.1 bits (23), Expect = 0.87
Identities = 44/51 (86%)
Strand = Plus / Minus
Query: 420 tggatgaagcagatccgcgacatcacctacgacatcgaggactgcatcgac 470
|||||||||||| ||| ||| ||||||||||| |||||||||||||||
Sbjct: 18735675 tggatgaagcagctccacgagctcacctacgactcggaggactgcatcgac 18735625
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 855 gtggggaagaccaccattgcca 876
||||||||||||||||||||||
Sbjct: 1934058 gtggggaagaccaccattgcca 1934037
>gb|AY707080.1 | Streptomyces turgidiscabies pathogenicity island putative
transposase, hypothetical protein, putative transposase
(IS1629), and negrogenic protein (nec1) genes, putative
transposase pseudogene, and putative resolvase/invertase
gene, complete cds
Length = 11000
Score = 44.1 bits (22), Expect = 3.5
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 377 cggcgccggccgagcccagacc 398
||||||||||||||||||||||
Sbjct: 7643 cggcgccggccgagcccagacc 7622
>emb|AL935070.3 |CNS08CCM Oryza sativa chromosome 12, . BAC OSJNBa0040P10 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 148705
Score = 44.1 bits (22), Expect = 3.5
Identities = 40/46 (86%)
Strand = Plus / Plus
Query: 419 ctggatgaagcagatccgcgacatcacctacgacatcgaggactgc 464
|||| |||||||| |||||||| | |||||||| |||||||||||
Sbjct: 37061 ctgggtgaagcaggtccgcgacgtggcctacgacgtcgaggactgc 37106
Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
Posted date: Dec 3, 2006 5:45 PM
Number of letters in database: 18,610,659,111
Number of sequences in database: 4,638,285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 635,140,013
Number of extensions: 34937990
Number of successful extensions: 195688
Number of sequences better than 10.0: 124
Number of HSP's gapped: 195660
Number of HSP's successfully gapped: 264
Length of query: 3554
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3530
Effective length of database: 18,499,340,271
Effective search space: 65302671156630
Effective search space used: 65302671156630
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)