ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9m08 |
|---|---|
| Clone Library Name | barley_pub |
>AK106208:Os01g0531500 | Length = 281 Score = 33.9 bits (76), Expect = 0.18 Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Frame = +3 Query: 135 KAKFPGVVVFSEIYQVTGPVSRFARQIAS--QGYIVAAPSSYHEFTGPASL-AYDGPGTD 305 K PG+VV E + V + A I+ +GY P Y G +L + Sbjct: 65 KENAPGIVVLQEWWGVDYEIKNHAVHISQIGEGYRALIPDLYR---GKVALDVAEAQHLM 121 Query: 306 KGNEWKITKTVAAYDEDATLTIDHLLSLPTCNG--RVGATGMCLGGHLAYRAALD-PRVS 476 +G +W A I + NG +VG TG C+GG L+ + + P V Sbjct: 122 EGLDWP----------GAVKDIQASVKWLKANGSPKVGVTGYCMGGALSIASGVSVPEVD 171 Query: 477 ASICYFATDIHSHTLGLNKSDDSLARAGDIRGELMMIFGKRDNHV 611 A + ++ T LA A + + FG+ D+ V Sbjct: 172 AVVAFYGT-----------PPSELADASKAQAPIQAHFGELDSFV 205
>AK104379:Os01g0531500 | Length = 276 Score = 33.9 bits (76), Expect = 0.18 Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Frame = +3 Query: 135 KAKFPGVVVFSEIYQVTGPVSRFARQIAS--QGYIVAAPSSYHEFTGPASL-AYDGPGTD 305 K PG+VV E + V + A I+ +GY P Y G +L + Sbjct: 60 KENAPGIVVLQEWWGVDYEIKNHAVHISQIGEGYRALIPDLYR---GKVALDVAEAQHLM 116 Query: 306 KGNEWKITKTVAAYDEDATLTIDHLLSLPTCNG--RVGATGMCLGGHLAYRAALD-PRVS 476 +G +W A I + NG +VG TG C+GG L+ + + P V Sbjct: 117 EGLDWP----------GAVKDIQASVKWLKANGSPKVGVTGYCMGGALSIASGVSVPEVD 166 Query: 477 ASICYFATDIHSHTLGLNKSDDSLARAGDIRGELMMIFGKRDNHV 611 A + ++ T LA A + + FG+ D+ V Sbjct: 167 AVVAFYGT-----------PPSELADASKAQAPIQAHFGELDSFV 200
>AK059992:Os01g0531500 | Length = 277 Score = 33.9 bits (76), Expect = 0.18 Identities = 40/165 (24%), Positives = 62/165 (37%), Gaps = 6/165 (3%) Frame = +3 Query: 135 KAKFPGVVVFSEIYQVTGPVSRFARQIAS--QGYIVAAPSSYHEFTGPASL-AYDGPGTD 305 K PG+VV E + V + A I+ +GY P Y G +L + Sbjct: 61 KENAPGIVVLQEWWGVDYEIKNHAVHISQIGEGYRALIPDLYR---GKVALDVAEAQHLM 117 Query: 306 KGNEWKITKTVAAYDEDATLTIDHLLSLPTCNG--RVGATGMCLGGHLAYRAALD-PRVS 476 +G +W A I + NG +VG TG C+GG L+ + + P V Sbjct: 118 EGLDWP----------GAVKDIQASVKWLKANGSPKVGVTGYCMGGALSIASGVSVPEVD 167 Query: 477 ASICYFATDIHSHTLGLNKSDDSLARAGDIRGELMMIFGKRDNHV 611 A + ++ T LA A + + FG+ D+ V Sbjct: 168 AVVAFYGT-----------PPSELADASKAQAPIQAHFGELDSFV 201
>U82833:Os01g0323600 | Length = 212 Score = 33.1 bits (74), Expect = 0.31 Identities = 33/99 (33%), Positives = 39/99 (39%) Frame = -3 Query: 845 HILHLHLRAIPRAQVRPQRPPKQLLEHLKADPRQRGIVPPFT*LIADECMLRPRHLPPPK 666 H HLH R Q R +R P Q H PRQ VP R HLPP Sbjct: 15 HRPHLHPARRDRHQRRDRRRP-QGARHQAGHPRQ---VPR-----------REDHLPPQP 59 Query: 665 QHPLLMQRLADQVPPLRRHMVIPLPKDHHQFATDVARAR 549 PL +R + P R P+DHH+ + RAR Sbjct: 60 LGPLRHRRAPRRRRPHR-------PQDHHRHLRRMGRAR 91
>AK071516:Os01g0323600 | Length = 212 Score = 33.1 bits (74), Expect = 0.31 Identities = 33/99 (33%), Positives = 39/99 (39%) Frame = -3 Query: 845 HILHLHLRAIPRAQVRPQRPPKQLLEHLKADPRQRGIVPPFT*LIADECMLRPRHLPPPK 666 H HLH R Q R +R P Q H PRQ VP R HLPP Sbjct: 15 HRPHLHPARRDRHQRRDRRRP-QGARHQAGHPRQ---VPR-----------REDHLPPQP 59 Query: 665 QHPLLMQRLADQVPPLRRHMVIPLPKDHHQFATDVARAR 549 PL +R + P R P+DHH+ + RAR Sbjct: 60 LGPLRHRRAPRRRRPHR-------PQDHHRHLRRMGRAR 91
>AK064085:Os02g0578000 | Length = 290 Score = 32.0 bits (71), Expect = 0.68 Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Frame = -3 Query: 683 HLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFATDVARA---REAVVGFVEPER 516 H P P QH LL+ + PP RH + LP+ H A D A +EAV EP R Sbjct: 80 HRPVP-QHGLLLAPARQEAPP--RHRLQELPRQHGGVAPDEVGADDPQEAVAAVGEPPR 135
>AK102461:Os05g0480600 | Length = 590 Score = 32.0 bits (71), Expect = 0.69 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Frame = -1 Query: 838 STSISAPSRGPRSDRNVRPNNSLSISKQIPDSAASYRPLLSSSRMNACCAHATSHHPNNT 659 STS SA +R S +N RP+ S S+ +P+S++ P + SR A ATS +N Sbjct: 165 STSDSAAAR-TTSAQNSRPSTPTSRSRAMPNSSSGAIPAM--SRPGASTISATSR--SNA 219 Query: 658 PFSCSVLRIRSRPSGGTWLSRFPKIIISS-PRMSPARARLSSDLLSPSV 515 + R S S +SR + S+ P MS + +R S+ P++ Sbjct: 220 STISATSRPGSSSSNVPGISRATSLSSSTVPSMSRSSSRSSTPTRQPAM 268
>AK073896:Os06g0642900 | Length = 275 Score = 32.0 bits (71), Expect = 0.69 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +2 Query: 8 PQPPNPHQTRQNAHRRVPQRCADQSRRRHAHLH 106 P PP+PH + H + C RRR AHLH Sbjct: 21 PSPPSPH----SHHHPAKRSCRSPHRRREAHLH 49
>Os03g0650800:Os03g0650800 | Length = 500 Score = 29.3 bits (64), Expect = 4.4 Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 2/70 (2%) Frame = -3 Query: 236 DDVAL--GCDLAGEAGDGAGYLVDLAEHNDTGELCFRVVRNDRMEDEDAHVAAGFGRHIF 63 D++AL G L GE GDGAGY +L ++ GE + + + E+ED V R I+ Sbjct: 181 DELALDDGFVLEGEDGDGAGYYPELRCYD--GEYYYEDGQKEG-EEEDDPVVVDLERRIY 237 Query: 62 VGLFDEHSGG 33 + D + G Sbjct: 238 LLEHDHKNHG 247
>AK102973:Os02g0326000 | Length = 281 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFATDVARARE----AVVGFVEP 522 P PPP HP L ++LA V +PK + A ARAR A VG E Sbjct: 12 PLLFPPPPPHPHLRRQLA----------VYSIPKSSFRSAAAAARARNPPRLASVGGAER 61 Query: 521 ERV 513 RV Sbjct: 62 RRV 64
>AK059937:Os02g0326000 | Length = 281 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 4/63 (6%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFATDVARARE----AVVGFVEP 522 P PPP HP L ++LA V +PK + A ARAR A VG E Sbjct: 12 PLLFPPPPPHPHLRRQLA----------VYSIPKSSFRSAAAAARARNPPRLASVGGAER 61 Query: 521 ERV 513 RV Sbjct: 62 RRV 64
>Os08g0229300:Os08g0229300 | Length = 254 Score = 26.2 bits (56), Expect(2) = 4.6 Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 2/54 (3%) Frame = +2 Query: 2 PEPQPPNPHQTRQNAHRRVPQRCADQSRRRHAHLHLPSDH--SELPESKVPRCR 157 P P PP +R RR P + R HA H PS + S + RCR Sbjct: 97 PVPSPPAARASRPEPSRRRPA-----APRAHAPRHRPSRRRSRSIAASSLRRCR 145 Score = 21.6 bits (44), Expect(2) = 4.6 Identities = 8/16 (50%), Positives = 10/16 (62%) Frame = +1 Query: 238 RRPHPTTNSPAPRPSP 285 RRP P+ +SP P P Sbjct: 177 RRPSPSPSSPLPYKHP 192
>AK102801:Os07g0267400 | Length = 931 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFAT 567 PR +P P P R + PP +R P P +HH+ A+ Sbjct: 485 PRRMPTPPPLP----RKSQSPPPAQRKSPSPPPAEHHRLAS 521
>AK067581:Os04g0416100 | Length = 319 Score = 28.9 bits (63), Expect = 5.8 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Frame = -3 Query: 677 PPPKQHPL--LMQRLADQVPPLRRHMVIPLPKDHHQFATDVARAREAVVGFV 528 PP QH + + QR PPL R P D+H+FA +R E G V Sbjct: 8 PPAAQHIVRSVRQRFVPLPPPLARAPFAAAPGDYHRFAA-ASRGGEIEEGIV 58
>AK063707:Os05g0511700 | Length = 260 Score = 28.9 bits (63), Expect = 5.8 Identities = 27/82 (32%), Positives = 36/82 (43%), Gaps = 2/82 (2%) Frame = -3 Query: 749 RQRGIVPPFT*LIADECMLR--PRHLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQ 576 R RG++PP +LR P PPP PLL P R+ + + + Sbjct: 12 RSRGLLPP---------LLRRSPSSGPPP---PLLR--------PTRQRRGLSVRASAAE 51 Query: 575 FATDVARAREAVVGFVEPERVA 510 A VA +AVVGFV +R A Sbjct: 52 LAAGVAGVEDAVVGFVTGKRKA 73
>AK058863:Os07g0267400 | Length = 425 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFAT 567 PR +P P P R + PP +R P P +HH+ A+ Sbjct: 351 PRRMPTPPPLP----RKSQSPPPAQRKSPSPPPAEHHRLAS 387
>AK120865:Os01g0208600 | Length = 1334 Score = 28.9 bits (63), Expect = 5.8 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 16/80 (20%) Frame = -1 Query: 895 APDISMWLLSDLDSTQHTFSTSIS----------APSRGPRSDRNVR------PNNSLSI 764 APDIS +LS + H ++I+ AP S+ R PN SL Sbjct: 515 APDISEPVLSGYTANPHPEVSAIATNTPVSNTEDAPGPLEISESASRAYIITLPNQSLPD 574 Query: 763 SKQIPDSAASYRPLLSSSRM 704 SK+IPDS A P+ S ++ Sbjct: 575 SKEIPDSKAEDAPIDSPEKL 594
>AK108643:Os06g0123000 | Length = 294 Score = 28.9 bits (63), Expect = 5.8 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = +1 Query: 244 PHPTTNSPAPRPSPTTAQAPT 306 P P SPAP P+P+ AQ+P+ Sbjct: 211 PPPPPPSPAPAPAPSNAQSPS 231
>AK072456:Os07g0186900 | Length = 169 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = +2 Query: 5 EPQPPNPHQTRQNAHRRVPQRCADQSRRRHAHLHLPSDHSELPESKVPRCR 157 E Q NP Q H R ++ D++ RH H H P H E RC+ Sbjct: 27 EDQEENPFQRCSRKHHRNTEQKGDEN-ERHGHHHSPLLHLGYGEFTGGRCQ 76
>AK067713:Os01g0208600 | Length = 838 Score = 28.9 bits (63), Expect = 5.8 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 16/80 (20%) Frame = -1 Query: 895 APDISMWLLSDLDSTQHTFSTSIS----------APSRGPRSDRNVR------PNNSLSI 764 APDIS +LS + H ++I+ AP S+ R PN SL Sbjct: 19 APDISEPVLSGYTANPHPEVSAIATNTPVSNTEDAPGPLEISESASRAYIITLPNQSLPD 78 Query: 763 SKQIPDSAASYRPLLSSSRM 704 SK+IPDS A P+ S ++ Sbjct: 79 SKEIPDSKAEDAPIDSPEKL 98
>Os08g0499100:Os08g0499100 | Length = 986 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Frame = +3 Query: 576 LMMIFGKRDNHVPPEGRDLIRKTLHEKGVL-FGWWEV 683 +++I GK+ N PPE +++RK G L FG W V Sbjct: 601 MILIKGKQKNDYPPEEMEVLRKLDERLGRLSFGLWIV 637
>Os07g0525000:Os07g0525000 | Length = 1532 Score = 28.5 bits (62), Expect = 7.6 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 15/94 (15%) Frame = -3 Query: 815 PRAQVRPQRPPKQLLEHLKADPRQRG--IVPPFT*---------LIADECMLRPRHLPPP 669 PRAQ R +R Q+ H R R + PP T A + R R +P P Sbjct: 58 PRAQCRRRR---QISLHASRSLRSRSLSVAPPATRRRATTTTRHAAAFDAAQRRRRMPTP 114 Query: 668 KQ----HPLLMQRLADQVPPLRRHMVIPLPKDHH 579 ++ H A +PP RH P P+ H+ Sbjct: 115 RRRRRRHAAAAFAAARAMPPPPRHATPPPPRPHN 148
>AB071808:Os12g0616400 | Length = 349 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLA 636 P PPP QHP L+QR A Sbjct: 285 PPPQPPPSQHPFLLQRFA 302
>AK120176:Os12g0435200 | Length = 576 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 10/59 (16%) Frame = -3 Query: 272 GAGEFVVG*GRRDDVALGC----------DLAGEAGDGAGYLVDLAEHNDTGELCFRVV 126 G+G+ VG R D LGC ++ G + +GY+V DTGE F V+ Sbjct: 484 GSGDCTVG---RRDFGLGCFAGEPFFVPDNIDGYGNEDSGYVVCYTHEEDTGESWFVVM 539
>AK106830:Os12g0616400 | Length = 208 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/18 (61%), Positives = 12/18 (66%) Frame = -3 Query: 689 PRHLPPPKQHPLLMQRLA 636 P PPP QHP L+QR A Sbjct: 144 PPPQPPPSQHPFLLQRFA 161
>AK067131:Os03g0221600 | Length = 480 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%) Frame = -3 Query: 695 LRPRHLPPPKQHPLLMQRL--ADQVPPLRRHMVIPLPKDHHQFATDVARAR 549 L RHL PP HP + D+ + H KD+H+F V R R Sbjct: 10 LHRRHLAPPTPHPQHRRHRHHGDEARQEQHHRRNDASKDYHRFLPRVLRRR 60
>Os06g0721600:Os06g0721600 | Length = 1127 Score = 28.5 bits (62), Expect = 7.6 Identities = 12/21 (57%), Positives = 15/21 (71%) Frame = +1 Query: 247 HPTTNSPAPRPSPTTAQAPTR 309 H +++S PRPSPT AQ TR Sbjct: 499 HGSSSSVKPRPSPTNAQLETR 519
>AK105139:Os03g0101000 | Length = 147 Score = 28.1 bits (61), Expect = 9.9 Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 3/96 (3%) Frame = -3 Query: 848 AHILHLHLRAIPRAQVRPQRPPKQLLE---HLKADPRQRGIVPPFT*LIADECMLRPRHL 678 AH HL PR RP R + LL HL D R +PP RPR Sbjct: 30 AHPHHLPRPRRPRLP-RPPRHRRLLLRTHAHLAGDARP---LPP-----PRRLPRRPRRP 80 Query: 677 PPPKQHPLLMQRLADQVPPLRRHMVIPLPKDHHQFA 570 PPP+ + ++ +D PLR P + HH A Sbjct: 81 PPPRGRGVRVEYSSDVRAPLRH----PNGRRHHLHA 112
>Os02g0794300:Os02g0794300 | Length = 1369 Score = 28.1 bits (61), Expect = 9.9 Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 3/120 (2%) Frame = -1 Query: 865 DLDSTQHTFSTSISAPSRGPRS-DRNVRPNNSLSISKQIPDSAASYRPLLSS--SRMNAC 695 D S FS S PS S R + P L+ISK + SYRP SS SR + Sbjct: 467 DAISRSTDFSDKDSRPSTSSSSAQRGISPLRRLTISKGTDFTDKSYRPSTSSAASRGVSP 526 Query: 694 CAHATSHHPNNTPFSCSVLRIRSRPSGGTWLSRFPKIIISSPRMSPARARLSSDLLSPSV 515 S N S + ++PS + S MSP R RL+SD +S ++ Sbjct: 527 RTRLASDSAGNILKSMDLADRDNKPSTSS---------ASLRGMSP-RRRLASDGISKNI 576
>AK099986:Os12g0580400 | Length = 447 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/37 (37%), Positives = 18/37 (48%) Frame = +2 Query: 2 PEPQPPNPHQTRQNAHRRVPQRCADQSRRRHAHLHLP 112 P P PP P R+ RR + +RR H H H+P Sbjct: 375 PRPPPPVPDPRRRRGRRRHVR----PARRPHHHRHVP 407
>AK071065:Os04g0469500 | Length = 487 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/24 (45%), Positives = 14/24 (58%) Frame = +1 Query: 1 AGTPTPKSSPNPPECSSKSPTKMC 72 A PTP P PP S +SP++ C Sbjct: 24 ARPPTPPPRPTPPSPSRRSPSETC 47
>AK059861:Os12g0124000 | Length = 271 Score = 28.1 bits (61), Expect = 9.9 Identities = 24/91 (26%), Positives = 38/91 (41%) Frame = -1 Query: 886 ISMWLLSDLDSTQHTFSTSISAPSRGPRSDRNVRPNNSLSISKQIPDSAASYRPLLSSSR 707 IS+ LLS +Q +++ PS S RP++ LS+ S AS L R Sbjct: 35 ISLPLLSSEHKSQTQMEAAVATPSLLFSSPTPRRPSSCLSLPPPCSSSYASNGAKLQQPR 94 Query: 706 MNACCAHATSHHPNNTPFSCSVLRIRSRPSG 614 + + + + S S+L +R SG Sbjct: 95 LQFVSQLTSRNSNGSGRRSISILSLRCSSSG 125 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 26,058,710 Number of extensions: 703396 Number of successful extensions: 4424 Number of sequences better than 10.0: 32 Number of HSP's gapped: 4364 Number of HSP's successfully gapped: 33 Length of query: 328 Length of database: 15,399,855 Length adjustment: 101 Effective length of query: 227 Effective length of database: 11,355,714 Effective search space: 2577747078 Effective search space used: 2577747078 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
