ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9l05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Os11g0643700:Os11g0643700 308 7e-84
2Os01g0922700:Os01g0922700 34 0.44
3AK108059:Os12g0162800 31 3.7
4Os06g0297400:Os06g0297400 30 4.8
5AJ575237:Os03g0821300 30 4.8
6AK073306:Os03g0821300 30 4.8
7AK071722:Os03g0821300 30 4.8
8AK102319:Os01g0618200 30 8.2

>Os11g0643700:Os11g0643700 |
          Length = 1088
 Score =  308 bits (790), Expect = 7e-84
 Identities = 164/225 (72%), Positives = 182/225 (80%), Gaps = 6/225 (2%)
 Frame = +1

Query: 490  RKRLYSSNDSPMLGTSVSRF*EARALHDGSSIPRQPNAGLLLEDVKKEAADYSDIDGLNG 669
            RKRL SSN SP+LGT+VS+F EAR   DG+SI R+PNAGLLLED+K+EAAD SD D L+ 
Sbjct: 32   RKRLSSSNASPLLGTAVSKFSEARLFCDGNSIQRRPNAGLLLEDIKQEAADISDFDSLDE 91

Query: 670  PKLFGSGK-RTSLDGG-----SGRRAARSVLTLVMLEDDMPREGETTSTTFASLLDSAIQ 831
             KLFGSGK R SLD       SGR+A RS L  V LE+DMP EGETTST FASLLDSAIQ
Sbjct: 92   SKLFGSGKKRASLDASDAGFSSGRQAVRSALKSVKLEEDMPHEGETTSTIFASLLDSAIQ 151

Query: 832  GLMPFPDVILQFERTCRNASESLRYAARGNIRMVEDKLMRQKAKLLLVEAASWSLLWYLY 1011
            GLMPF DVILQFERTCRNASES+R A  G +RMVED+LM+QKA+LLL EAASWSLLWYLY
Sbjct: 152  GLMPFSDVILQFERTCRNASESIRSAGTGKLRMVEDRLMQQKAQLLLDEAASWSLLWYLY 211

Query: 1012 GKANEELPEGQFMSPTTSH*EACRYVAMDLTTQLCPRIVLWLEGL 1146
            GK NEELP   F++PTTSH EACR+V  DLT QLC RIVLWLEGL
Sbjct: 212  GKGNEELPGELFVAPTTSHQEACRFVVTDLTAQLCLRIVLWLEGL 256



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>Os01g0922700:Os01g0922700 |
          Length = 228

 Score = 33.9 bits (76), Expect = 0.44
 Identities = 37/124 (29%), Positives = 47/124 (37%), Gaps = 8/124 (6%)
 Frame = -2

Query: 367 YKIQ*GSQVLGP----DPLQKTGRNPRVGW*GKFCSPKPWRF*GFSGGRPACFSHCPPSG 200
           Y+ Q G + LGP       ++  R       G FC+ +   F    G RP   S   P  
Sbjct: 24  YQQQMGLRRLGPYFSPTKPKRPHRKGMTAQPGPFCNRRRTDFYSLVGHRPGS-SLRGPIR 82

Query: 199 WSSL----NEGRRGIDREPGRMPTLVAGLVDWTRVCDADEEDAAERSGARSTGDRRRLPK 32
           W S      +  R I R  G      AG      VC  D   A +R G+   G RRR PK
Sbjct: 83  WLSRPKQQQQPARRIRRAAGDDAFAAAG----EAVCARDVAGATDRRGSHRRGSRRRAPK 138

Query: 31  EGRS 20
             R+
Sbjct: 139 SSRN 142



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>AK108059:Os12g0162800 |
          Length = 329

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 38/144 (26%), Positives = 53/144 (36%), Gaps = 6/144 (4%)
 Frame = +1

Query: 475 LLLVQRKRLYSSNDSPMLGTSVSRF*EARALHDGSSIPRQPNA---GLLLEDVKKEAADY 645
           LLL  R RL   +   +L   + R    R    G    R P++   G          +  
Sbjct: 44  LLLHHRHRLRRPSREALLRRGLRRAGGRRTTAAGCQSGRHPDSDGQGGRRCVTTTAGSSS 103

Query: 646 SDIDGLNGPKLFGSGKRTSLDGGSGRRAARSVLTLVMLEDDMPREGETTSTTFASLLDSA 825
           SD  G  G +  GSG  +    G GRR + + L +       PR+G  T   F   +  A
Sbjct: 104 SDYQGGGGGRAAGSGSGS----GRGRRGSCTALLVGHTASRNPRQGSPTRRRFGVQVGEA 159

Query: 826 IQGLMPF---PDVILQFERTCRNA 888
            +   P       +LQ  RT R A
Sbjct: 160 TRHQRPLRRQGHRLLQLRRTSRQA 183



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>Os06g0297400:Os06g0297400 |
          Length = 1043

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -2

Query: 295 GW*GKFCSPKPWRF*GFSGGRPACFS-HCPPS 203
           GW G F SP+ WR+ GF G  P C + H  PS
Sbjct: 5   GWAGAF-SPRSWRWRGFLGPAPRCHADHHGPS 35



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>AJ575237:Os03g0821300 |
          Length = 154

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 1345 VLELSKLPLINICQYIQCNCSLFHHHL 1425
            +LE+ ++  +    YI CN SLFHH L
Sbjct: 35   LLEMFRIDYVGSSPYISCNPSLFHHKL 61



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>AK073306:Os03g0821300 |
          Length = 254

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 1345 VLELSKLPLINICQYIQCNCSLFHHHL 1425
            +LE+ ++  +    YI CN SLFHH L
Sbjct: 135  LLEMFRIDYVGSSPYISCNPSLFHHKL 161



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>AK071722:Os03g0821300 |
          Length = 639

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 1345 VLELSKLPLINICQYIQCNCSLFHHHL 1425
            +LE+ ++  +    YI CN SLFHH L
Sbjct: 520  LLEMFRIDYVGSSPYISCNPSLFHHKL 546



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>AK102319:Os01g0618200 |
          Length = 193

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 7/57 (12%)
 Frame = -3

Query: 183 KADAESIENQAGCLPWSRDWWIG------RGFAT-XXXXXXXRDPALGAQEIDDDCQ 34
           K + + IEN  G + WS  W +G      R F           +P +  QEIDDD +
Sbjct: 66  KDERKRIENAGGVVTWSGTWRVGGVLAMSRAFGNRFLKRFVVAEPEVQEQEIDDDLE 122


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 57,513,122
Number of extensions: 1340798
Number of successful extensions: 3113
Number of sequences better than 10.0: 8
Number of HSP's gapped: 3111
Number of HSP's successfully gapped: 8
Length of query: 668
Length of database: 15,399,855
Length adjustment: 107
Effective length of query: 561
Effective length of database: 11,115,468
Effective search space: 6235777548
Effective search space used: 6235777548
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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