ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9l05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_001074892.1| Oryza sativa (japonica cultivar-group) Os11g... 307 8e-80
2gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome... 119 4e-23
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 119 4e-23
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 107 2e-19
5gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome... 107 2e-19
6dbj|AK242865.1| Oryza sativa (japonica cultivar-group) cDNA, clo... 70 3e-08
7ref|NM_001071106.1| Oryza sativa (japonica cultivar-group) Os10g... 70 3e-08
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-08
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-08
10dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic D... 70 3e-08
11gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb00... 70 3e-08
12dbj|AK068095.1| Oryza sativa (japonica cultivar-group) cDNA clon... 70 3e-08
13gb|AC144836.3| Homo sapiens chromosome 17, clone WI2-84318G5, co... 46 0.49
14gb|AC187370.3| Pan troglodytes BAC clone CH251-631N1 from chromo... 44 1.9
15gb|AC189542.1| Brassica rapa subsp. pekinensis clone KBrH004B20,... 44 1.9
16gb|AC007393.3| Homo sapiens BAC clone RP11-451J3 from 7, complet... 44 1.9
17gb|AC092753.9| Homo sapiens 12 BAC RP11-164B11 (Roswell Park Can... 44 1.9
18dbj|AK113796.1| Ciona intestinalis cDNA, clone:cicl010a02, full ... 44 1.9
19ref|XR_021602.1| PREDICTED: Pan troglodytes similar to TSEN2 pro... 42 7.7
20ref|XM_001170848.1| PREDICTED: Pan troglodytes microfilament and... 42 7.7
21ref|XM_001170883.1| PREDICTED: Pan troglodytes microfilament and... 42 7.7
22ref|XM_513340.2| PREDICTED: Pan troglodytes microfilament and ac... 42 7.7
23ref|XR_019630.1| PREDICTED: Homo sapiens similar to tRNA splicin... 42 7.7
24ref|XR_016226.1| PREDICTED: Homo sapiens similar to tRNA splicin... 42 7.7
25ref|XR_013970.1| PREDICTED: Macaca mulatta similar to microfilam... 42 7.7
26emb|CT025609.16| Mouse DNA sequence from clone RP23-202B14 on ch... 42 7.7
27gb|AC166369.5| Mus musculus BAC clone RP23-45A11 from chromosome... 42 7.7
28gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, com... 42 7.7
29gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital ... 42 7.7
30gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, co... 42 7.7
31gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, co... 42 7.7
32gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome... 42 7.7
33gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complet... 42 7.7
34dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome 42 7.7
35gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome... 42 7.7
36gb|AC105925.5| Homo sapiens BAC clone RP11-753I4 from 4, complet... 42 7.7
37gb|AF317696.1|AF317696 Homo sapiens macrophin 1 isoform 4 (MACF1... 42 7.7
38gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 255... 42 7.7
39ref|NM_033044.2| Homo sapiens microtubule-actin crosslinking fac... 42 7.7
40gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Can... 42 7.7
41gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complet... 42 7.7
42gb|AC068762.15| Homo sapiens 3 BAC RP11-215N17 (Roswell Park Can... 42 7.7
43gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Can... 42 7.7
44dbj|AP003098.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 7.7
45emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on ch... 42 7.7
46dbj|D64033.1| Oryzias latipes DNA for transferrin, complete cds 42 7.7 
>ref|NM_001074892.1| Oryza sativa (japonica cultivar-group) Os11g0643700 (Os11g0643700)
            mRNA, complete cds
          Length = 3267
 Score =  307 bits (155), Expect = 8e-80
 Identities = 326/383 (85%)
 Strand = Plus / Plus

                                                                        
Query: 757  ctggaggacgatatgccacgagaaggagaaacaacttctacaacgtttgcatcccttctt 816
            |||||||| ||||||||||  ||||||||||||||||||||||  ||||||||||| |||
Sbjct: 379  ctggaggaggatatgccacatgaaggagaaacaacttctacaatttttgcatccctcctt 438

                                                                        
Query: 817  gattcagcgatacaaggattgatgcccttcccggacgtgattttacaatttgagaggaca 876
            ||||| || || |||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct: 439  gattctgcaatccaaggattgatgcccttctcggatgtgattttacaatttgagaggaca 498

                                                                        
Query: 877  tgtagaaacgcttcagagtcactaaggtatgccgccagaggaaacattcggatggtggag 936
            ||| |||| |||||||||||  ||||||  || |  | ||||||  ||||||||||||||
Sbjct: 499  tgtcgaaatgcttcagagtcgataaggtccgctgggacaggaaagcttcggatggtggag 558

                                                                        
Query: 937  gataaacttatgcggcaaaaagcaaaactattactggttgaagctgcttcttggtccctt 996
            |||| |||||||| |||||||||  || | ||||||| ||| |||||||||||||| |||
Sbjct: 559  gatagacttatgcagcaaaaagcgcaattgttactggatgaggctgcttcttggtcactt 618

                                                                        
Query: 997  ctttggtacctctatgggaaagcaaatgaagagcttcctgaaggacaattcatgtcacca 1056
            |||||||||||||||||||||| |||||| |||||||||| ||  | |||  || |||| 
Sbjct: 619  ctttggtacctctatgggaaaggaaatgaggagcttcctggagagctatttgtggcaccg 678

                                                                        
Query: 1057 actacatcccattaggaggcttgccgctatgttgcaatggatcttacaacacaattgtgt 1116
            ||||| |||||| | || |||||||||| ||||| ||  || |||||  |||| || |||
Sbjct: 679  actacttcccatcaagaagcttgccgctttgttgtaacagaccttacggcacagttatgt 738

                                   
Query: 1117 ccgcggattgtactttggcttga 1139
            |  ||||||||||||||||||||
Sbjct: 739  ctacggattgtactttggcttga 761



 Score =  105 bits (53), Expect = 6e-19
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                       
Query: 490 agaaagagactatattcttcaaatgactccccaatgttggggacctcagtctctagattc 549
           ||||||||| ||| ||||||||||| ||| ||| ||||||| ||  | ||||| | ||| 
Sbjct: 94  agaaagagattatcttcttcaaatgcctctccactgttgggtactgcggtctccaaattt 153

                                                                       
Query: 550 tgagaagcaagggcgttgcatgatggaagcagcatacctaggcagcccaatgctggtcta 609
           | ||||||||||  |||   |||||||| ||||||||  |||| ||||||||||||||||
Sbjct: 154 tcagaagcaaggctgttctgtgatggaaacagcatacagaggcggcccaatgctggtcta 213

                                                                       
Query: 610 ctacttgaagacgtcaagaaggaggctgctgattattccgacattgatggcttgaatgga 669
           || ||||||||  ||||| ||||||||||||||  ||| ||  ||||| || || ||| |
Sbjct: 214 ctccttgaagatatcaagcaggaggctgctgatatttctgattttgatagcctggatgaa 273

                                    
Query: 670 ccgaaactgtttggatcaggaaaaa 694
            | || |||||||||||||||||||
Sbjct: 274 tctaagctgtttggatcaggaaaaa 298
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>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0041L19, complete sequence
          Length = 155086

 Score =  119 bits (60), Expect = 4e-23
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                          
Query: 923    ttcggatggtggaggataaacttatgcggcaaaaagcaaaactattactggttgaagctg 982
              |||||||||||||||||| |||||||| |||||||||  || | ||||||| ||| ||||
Sbjct: 151653 ttcggatggtggaggatagacttatgcagcaaaaagcgcaattgttactggatgaggctg 151712

                                                  
Query: 983    cttcttggtcccttctttggtacctctatgggaaag 1018
              |||||||||| |||||||||||||||||||||||||
Sbjct: 151713 cttcttggtcacttctttggtacctctatgggaaag 151748



 Score =  105 bits (53), Expect = 6e-19
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                          
Query: 490    agaaagagactatattcttcaaatgactccccaatgttggggacctcagtctctagattc 549
              ||||||||| ||| ||||||||||| ||| ||| ||||||| ||  | ||||| | ||| 
Sbjct: 150359 agaaagagattatcttcttcaaatgcctctccactgttgggtactgcggtctccaaattt 150418

                                                                          
Query: 550    tgagaagcaagggcgttgcatgatggaagcagcatacctaggcagcccaatgctggtcta 609
              | ||||||||||  |||   |||||||| ||||||||  |||| ||||||||||||||||
Sbjct: 150419 tcagaagcaaggctgttctgtgatggaaacagcatacagaggcggcccaatgctggtcta 150478

                                                                          
Query: 610    ctacttgaagacgtcaagaaggaggctgctgattattccgacattgatggcttgaatgga 669
              || ||||||||  ||||| ||||||||||||||  ||| ||  ||||| || || ||| |
Sbjct: 150479 ctccttgaagatatcaagcaggaggctgctgatatttctgattttgatagcctggatgaa 150538

                                       
Query: 670    ccgaaactgtttggatcaggaaaaa 694
               | || |||||||||||||||||||
Sbjct: 150539 tctaagctgtttggatcaggaaaaa 150563



 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                          
Query: 831    aggattgatgcccttcccggacgtgattttacaatttgagaggacatgtagaaacgcttc 890
              |||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 151266 aggattgatgcccttctcggatgtgattttacaatttgagaggacatgtcgaaatgcttc 151325

                    
Query: 891    agagtc 896
              ||||||
Sbjct: 151326 agagtc 151331



 Score = 81.8 bits (41), Expect = 9e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                          
Query: 757    ctggaggacgatatgccacgagaaggagaaacaacttctacaacgtttgcatcccttctt 816
              |||||||| ||||||||||  ||||||||||||||||||||||  ||||||||||| |||
Sbjct: 150644 ctggaggaggatatgccacatgaaggagaaacaacttctacaatttttgcatccctcctt 150703

                   
Query: 817    gattc 821
              |||||
Sbjct: 150704 gattc 150708



 Score = 48.1 bits (24), Expect = 0.12
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                          
Query: 1052   caccaactacatcccattaggaggcttgccgctatgttgcaatggatcttacaacacaat 1111
              |||| ||||| |||||| | || |||||||||| ||||| ||  || |||||  |||| |
Sbjct: 152020 caccgactacttcccatcaagaagcttgccgctttgttgtaacagaccttacggcacagt 152079

                                          
Query: 1112   tgtgtccgcggattgtactttggcttga 1139
              | ||||  ||||||||||||||||||||
Sbjct: 152080 tatgtctacggattgtactttggcttga 152107
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score =  119 bits (60), Expect = 4e-23
 Identities = 87/96 (90%)
 Strand = Plus / Plus

                                                                            
Query: 923      ttcggatggtggaggataaacttatgcggcaaaaagcaaaactattactggttgaagctg 982
                |||||||||||||||||| |||||||| |||||||||  || | ||||||| ||| ||||
Sbjct: 24674751 ttcggatggtggaggatagacttatgcagcaaaaagcgcaattgttactggatgaggctg 24674810

                                                    
Query: 983      cttcttggtcccttctttggtacctctatgggaaag 1018
                |||||||||| |||||||||||||||||||||||||
Sbjct: 24674811 cttcttggtcacttctttggtacctctatgggaaag 24674846



 Score =  105 bits (53), Expect = 6e-19
 Identities = 167/205 (81%)
 Strand = Plus / Plus

                                                                            
Query: 490      agaaagagactatattcttcaaatgactccccaatgttggggacctcagtctctagattc 549
                ||||||||| ||| ||||||||||| ||| ||| ||||||| ||  | ||||| | ||| 
Sbjct: 24673457 agaaagagattatcttcttcaaatgcctctccactgttgggtactgcggtctccaaattt 24673516

                                                                            
Query: 550      tgagaagcaagggcgttgcatgatggaagcagcatacctaggcagcccaatgctggtcta 609
                | ||||||||||  |||   |||||||| ||||||||  |||| ||||||||||||||||
Sbjct: 24673517 tcagaagcaaggctgttctgtgatggaaacagcatacagaggcggcccaatgctggtcta 24673576

                                                                            
Query: 610      ctacttgaagacgtcaagaaggaggctgctgattattccgacattgatggcttgaatgga 669
                || ||||||||  ||||| ||||||||||||||  ||| ||  ||||| || || ||| |
Sbjct: 24673577 ctccttgaagatatcaagcaggaggctgctgatatttctgattttgatagcctggatgaa 24673636

                                         
Query: 670      ccgaaactgtttggatcaggaaaaa 694
                 | || |||||||||||||||||||
Sbjct: 24673637 tctaagctgtttggatcaggaaaaa 24673661



 Score = 99.6 bits (50), Expect = 4e-17
 Identities = 62/66 (93%)
 Strand = Plus / Plus

                                                                            
Query: 831      aggattgatgcccttcccggacgtgattttacaatttgagaggacatgtagaaacgcttc 890
                |||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |||||
Sbjct: 24674364 aggattgatgcccttctcggatgtgattttacaatttgagaggacatgtcgaaatgcttc 24674423

                      
Query: 891      agagtc 896
                ||||||
Sbjct: 24674424 agagtc 24674429



 Score = 81.8 bits (41), Expect = 9e-12
 Identities = 59/65 (90%)
 Strand = Plus / Plus

                                                                            
Query: 757      ctggaggacgatatgccacgagaaggagaaacaacttctacaacgtttgcatcccttctt 816
                |||||||| ||||||||||  ||||||||||||||||||||||  ||||||||||| |||
Sbjct: 24673742 ctggaggaggatatgccacatgaaggagaaacaacttctacaatttttgcatccctcctt 24673801

                     
Query: 817      gattc 821
                |||||
Sbjct: 24673802 gattc 24673806



 Score = 48.1 bits (24), Expect = 0.12
 Identities = 72/88 (81%)
 Strand = Plus / Plus

                                                                            
Query: 1052     caccaactacatcccattaggaggcttgccgctatgttgcaatggatcttacaacacaat 1111
                |||| ||||| |||||| | || |||||||||| ||||| ||  || |||||  |||| |
Sbjct: 24675118 caccgactacttcccatcaagaagcttgccgctttgttgtaacagaccttacggcacagt 24675177

                                            
Query: 1112     tgtgtccgcggattgtactttggcttga 1139
                | ||||  ||||||||||||||||||||
Sbjct: 24675178 tatgtctacggattgtactttggcttga 24675205
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score =  107 bits (54), Expect = 2e-19
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                           
Query: 367     atgattccagatgttcaggtgtatcgcactgcatgctacacaagtcaattttgcaggttg 426
               ||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 2436402 atgattccacatgttccggtgtatcacactgcatgctacacaagtcaattctgcaggttg 2436343

                                         
Query: 427     ctctgaaatgcgctgagttagataca 452
               |||| |||||| | || |||||||||
Sbjct: 2436342 ctcttaaatgctcagaattagataca 2436317



 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                           
Query: 263     aggttttggagagcagaacttcccttaccaaccaactcgagggttcctcccagttttttg 322
               |||||||||||| ||||| |||||||| |||||||||||||| | | |  ||||| | ||
Sbjct: 2436665 aggttttggagaacagaatttcccttatcaaccaactcgaggatccttttcagttgtgtg 2436606

                                
Query: 323     cagaggatctgggccta 339
               |||| ||||||||||||
Sbjct: 2436605 cagatgatctgggccta 2436589
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>gb|AC119796.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1172F09,
            complete sequence
          Length = 106057

 Score =  107 bits (54), Expect = 2e-19
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                        
Query: 367  atgattccagatgttcaggtgtatcgcactgcatgctacacaagtcaattttgcaggttg 426
            ||||||||| |||||| |||||||| |||||||||||||||||||||||| |||||||||
Sbjct: 8788 atgattccacatgttccggtgtatcacactgcatgctacacaagtcaattctgcaggttg 8729

                                      
Query: 427  ctctgaaatgcgctgagttagataca 452
            |||| |||||| | || |||||||||
Sbjct: 8728 ctcttaaatgctcagaattagataca 8703



 Score = 65.9 bits (33), Expect = 5e-07
 Identities = 66/77 (85%)
 Strand = Plus / Minus

                                                                        
Query: 263  aggttttggagagcagaacttcccttaccaaccaactcgagggttcctcccagttttttg 322
            |||||||||||| ||||| |||||||| |||||||||||||| | | |  ||||| | ||
Sbjct: 9051 aggttttggagaacagaatttcccttatcaaccaactcgaggatccttttcagttgtgtg 8992

                             
Query: 323  cagaggatctgggccta 339
            |||| ||||||||||||
Sbjct: 8991 cagatgatctgggccta 8975
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>dbj|AK242865.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J090075E01, full
            insert sequence
          Length = 3656

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 952  caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
            ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 2256 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 2315

                   
Query: 1012 gggaaag 1018
            | |||||
Sbjct: 2316 gtgaaag 2322
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>ref|NM_001071106.1| Oryza sativa (japonica cultivar-group) Os10g0408700 (Os10g0408700)
            mRNA, complete cds
          Length = 2514

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 952  caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
            ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 2247 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 2306

                   
Query: 1012 gggaaag 1018
            | |||||
Sbjct: 2307 gtgaaag 2313
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                            
Query: 952      caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
                ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 13585124 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 13585183

                       
Query: 1012     gggaaag 1018
                | |||||
Sbjct: 13585184 gtgaaag 13585190
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                           
Query: 952     caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
               ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 2856798 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 2856739

                      
Query: 1012    gggaaag 1018
               | |||||
Sbjct: 2856738 gtgaaag 2856732
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>dbj|AP005412.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0050G13
          Length = 150685

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                          
Query: 952    caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
              ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 125026 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 124967

                     
Query: 1012   gggaaag 1018
              | |||||
Sbjct: 124966 gtgaaag 124960
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>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10,
             complete sequence
          Length = 162101

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 952   caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
             ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 54126 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 54185

                    
Query: 1012  gggaaag 1018
             | |||||
Sbjct: 54186 gtgaaag 54192
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>dbj|AK068095.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013135P11, full
            insert sequence
          Length = 2515

 Score = 69.9 bits (35), Expect = 3e-08
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                        
Query: 952  caaaaagcaaaactattactggttgaagctgcttcttggtcccttctttggtacctctat 1011
            ||||||||| | || ||||||  |||||||||||||||||| | ||||||||||||||||
Sbjct: 2248 caaaaagcacagctgttactgaatgaagctgcttcttggtcacatctttggtacctctat 2307

                   
Query: 1012 gggaaag 1018
            | |||||
Sbjct: 2308 gtgaaag 2314
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>gb|AC144836.3| Homo sapiens chromosome 17, clone WI2-84318G5, complete sequence
          Length = 41369

 Score = 46.1 bits (23), Expect = 0.49
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 1250  ccatgatatgttaacttaaatat 1272
             |||||||||||||||||||||||
Sbjct: 28821 ccatgatatgttaacttaaatat 28843
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>gb|AC187370.3| Pan troglodytes BAC clone CH251-631N1 from chromosome 7, complete
             sequence
          Length = 189786

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1658  cccatttgaagatcaaatttataatt 1683
             |||||||||| |||||||||||||||
Sbjct: 78659 cccatttgaatatcaaatttataatt 78684
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>gb|AC189542.1| Brassica rapa subsp. pekinensis clone KBrH004B20, complete sequence
          Length = 121057

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1632  aaaacatgtaattagagatcat 1653
             ||||||||||||||||||||||
Sbjct: 26051 aaaacatgtaattagagatcat 26072
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>gb|AC007393.3| Homo sapiens BAC clone RP11-451J3 from 7, complete sequence
          Length = 71082

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 1658  cccatttgaagatcaaatttataatt 1683
             |||||||||| |||||||||||||||
Sbjct: 45100 cccatttgaatatcaaatttataatt 45125
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>gb|AC092753.9| Homo sapiens 12 BAC RP11-164B11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 84353

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 1003  tacctctatgggaaagcaaatgaaga 1028
             |||||||||||||||| |||||||||
Sbjct: 57277 tacctctatgggaaagaaaatgaaga 57252
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>dbj|AK113796.1| Ciona intestinalis cDNA, clone:cicl010a02, full insert sequence
          Length = 1700

 Score = 44.1 bits (22), Expect = 1.9
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1398 caactgctctttgttccaccat 1419
            ||||||||||||||||||||||
Sbjct: 914  caactgctctttgttccaccat 893
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>ref|XR_021602.1| PREDICTED: Pan troglodytes similar to TSEN2 protein (LOC742296),
           mRNA
          Length = 1707

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 481 ttggtgcaaagaaagagacta 501
           |||||||||||||||||||||
Sbjct: 852 ttggtgcaaagaaagagacta 872
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>ref|XM_001170848.1| PREDICTED: Pan troglodytes microfilament and actin filament
            cross-linker protein, transcript variant 2 (MACF1), mRNA
          Length = 19298

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1143 actttagtcttttctatttcc 1163
            |||||||||||||||||||||
Sbjct: 5894 actttagtcttttctatttcc 5874
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>ref|XM_001170883.1| PREDICTED: Pan troglodytes microfilament and actin filament
             cross-linker protein, transcript variant 3 (MACF1), mRNA
          Length = 24045

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1143  actttagtcttttctatttcc 1163
             |||||||||||||||||||||
Sbjct: 10641 actttagtcttttctatttcc 10621
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>ref|XM_513340.2| PREDICTED: Pan troglodytes microfilament and actin filament
             cross-linker protein, transcript variant 4 (MACF1), mRNA
          Length = 23881

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1143  actttagtcttttctatttcc 1163
             |||||||||||||||||||||
Sbjct: 10477 actttagtcttttctatttcc 10457
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>ref|XR_019630.1| PREDICTED: Homo sapiens similar to tRNA splicing endonuclease 2
           homolog (LOC391718), mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 481 ttggtgcaaagaaagagacta 501
           |||||||||||||||||||||
Sbjct: 825 ttggtgcaaagaaagagacta 845
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>ref|XR_016226.1| PREDICTED: Homo sapiens similar to tRNA splicing endonuclease 2
           homolog (LOC391718), mRNA
          Length = 1392

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 481 ttggtgcaaagaaagagacta 501
           |||||||||||||||||||||
Sbjct: 825 ttggtgcaaagaaagagacta 845
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>ref|XR_013970.1| PREDICTED: Macaca mulatta similar to microfilament and actin filament
             cross-linker protein isoform a (LOC718651), mRNA
          Length = 23935

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1143  actttagtcttttctatttcc 1163
             |||||||||||||||||||||
Sbjct: 10550 actttagtcttttctatttcc 10530
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>emb|CT025609.16| Mouse DNA sequence from clone RP23-202B14 on chromosome 13, complete
             sequence
          Length = 83406

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 977   aagctgcttcttggtcccttc 997
             |||||||||||||||||||||
Sbjct: 20293 aagctgcttcttggtcccttc 20273
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>gb|AC166369.5| Mus musculus BAC clone RP23-45A11 from chromosome 14, complete sequence
          Length = 226970

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1256  tatgttaacttaaatatttga 1276
             |||||||||||||||||||||
Sbjct: 15992 tatgttaacttaaatatttga 15972
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>gb|AC125027.12| Mus musculus chromosome 8, clone RP24-68F20, complete sequence
          Length = 194850

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1150  tcttttctatttcctctttga 1170
             |||||||||||||||||||||
Sbjct: 89881 tcttttctatttcctctttga 89901
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>gb|AC150644.4| Bos taurus  BAC CH240-223I2 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 199501

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 1195   atgattgattgattcctttagtaaa 1219
              |||||||||| ||||||||||||||
Sbjct: 187095 atgattgattcattcctttagtaaa 187071
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>gb|AC125259.8| Mus musculus chromosome 19, clone RP24-202G16, complete sequence
          Length = 159753

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   tgtatgattccagatgttcag 384
             |||||||||||||||||||||
Sbjct: 71675 tgtatgattccagatgttcag 71695
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>gb|AC103379.8| Mus musculus chromosome 13, clone RP24-245I24, complete sequence
          Length = 170688

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 977    aagctgcttcttggtcccttc 997
              |||||||||||||||||||||
Sbjct: 111874 aagctgcttcttggtcccttc 111854
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>gb|AC126248.3| Mus musculus BAC clone RP24-422C6 from chromosome 3, complete sequence
          Length = 192092

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1014  gaaagcaaatgaagagcttcc 1034
             |||||||||||||||||||||
Sbjct: 75927 gaaagcaaatgaagagcttcc 75947
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>gb|AC126557.3| Mus musculus BAC clone RP23-201J9 from 3, complete sequence
          Length = 176278

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1014   gaaagcaaatgaagagcttcc 1034
              |||||||||||||||||||||
Sbjct: 168212 gaaagcaaatgaagagcttcc 168232
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>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1211   tttagtaaaagaattagcaaa 1231
              |||||||||||||||||||||
Sbjct: 352521 tttagtaaaagaattagcaaa 352541
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>gb|AC154575.2| Mus musculus BAC clone RP23-248E1 from chromosome 14, complete sequence
          Length = 210912

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1256   tatgttaacttaaatatttga 1276
              |||||||||||||||||||||
Sbjct: 169204 tatgttaacttaaatatttga 169184
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>gb|AC105925.5| Homo sapiens BAC clone RP11-753I4 from 4, complete sequence
          Length = 136197

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 481   ttggtgcaaagaaagagacta 501
             |||||||||||||||||||||
Sbjct: 17204 ttggtgcaaagaaagagacta 17224
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>gb|AF317696.1|AF317696 Homo sapiens macrophin 1 isoform 4 (MACF1) mRNA, complete cds
          Length = 19153

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1143 actttagtcttttctatttcc 1163
            |||||||||||||||||||||
Sbjct: 5879 actttagtcttttctatttcc 5859
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>gb|AE009951.2| Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete genome
          Length = 2174500

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 1695   ttgaagatcttcatgatttag 1715
              |||||||||||||||||||||
Sbjct: 175023 ttgaagatcttcatgatttag 175003
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>ref|NM_033044.2| Homo sapiens microtubule-actin crosslinking factor 1 (MACF1),
            transcript variant 2, mRNA
          Length = 19271

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1143 actttagtcttttctatttcc 1163
            |||||||||||||||||||||
Sbjct: 5890 actttagtcttttctatttcc 5870
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>gb|AC152977.1| Mus musculus 10 BAC RP23-251I19 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 192515

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 983   cttcttggtcccttctttggt 1003
             |||||||||||||||||||||
Sbjct: 85396 cttcttggtcccttctttggt 85376
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>gb|AC009950.6| Homo sapiens BAC clone RP11-98F19 from 2, complete sequence
          Length = 135506

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 1360  aaattgcccctaattaatatttgtcaatacatt 1392
             ||||| || ||||||||||| ||||||||||||
Sbjct: 54141 aaatttccactaattaatatatgtcaatacatt 54173
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>gb|AC068762.15| Homo sapiens 3 BAC RP11-215N17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152541

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1663  ttgaagatcaaatttataatt 1683
             |||||||||||||||||||||
Sbjct: 67244 ttgaagatcaaatttataatt 67224
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>gb|AC155286.8| Mus musculus 10 BAC RP23-213N17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 219072

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 251    tcagaatctccaaggttttggagag 275
              ||||||||||||||| |||||||||
Sbjct: 130490 tcagaatctccaaggatttggagag 130514
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>dbj|AP003098.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-141D23, complete
             sequence
          Length = 183853

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 583   atacctaggcagcccaatgct 603
             |||||||||||||||||||||
Sbjct: 71926 atacctaggcagcccaatgct 71906
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>emb|AL607041.18| Mouse DNA sequence from clone RP23-434K11 on chromosome 11, complete
              sequence
          Length = 198761

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 471    tttcttgctcttggtgcaaag 491
              |||||||||||||||||||||
Sbjct: 100114 tttcttgctcttggtgcaaag 100094
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>dbj|D64033.1| Oryzias latipes DNA for transferrin, complete cds
          Length = 8415

 Score = 42.1 bits (21), Expect = 7.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 1718 tgttaaatttgacatgttgat 1738
            |||||||||||||||||||||
Sbjct: 890  tgttaaatttgacatgttgat 870


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 348,628,928
Number of extensions: 18773086
Number of successful extensions: 116055
Number of sequences better than 10.0: 46
Number of HSP's gapped: 116045
Number of HSP's successfully gapped: 57
Length of query: 2006
Length of database: 18,610,659,111
Length adjustment: 23
Effective length of query: 1983
Effective length of database: 18,503,978,556
Effective search space: 36693389476548
Effective search space used: 36693389476548
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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