Clone Name | FLbaf9k18 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | Os07g0103200:Os07g0103200 | 231 | 6e-61 | 2 | AK101541:Os12g0596000 | 35 | 0.11 | 3 | AK073530:Os12g0596000 | 35 | 0.11 | 4 | AK102859:Os08g0528700 | 31 | 2.1 | 5 | Os01g0242700:Os01g0242700 | 30 | 2.7 | 6 | Os01g0833600:Os01g0833600 | 30 | 3.6 | 7 | AK099853:Os02g0190800 | 30 | 3.6 | 8 | AK069019:Os05g0199100 | 30 | 4.7 | 9 | AK064107:Os09g0531200 | 30 | 4.7 | 10 | AK062594:Os07g0187900 | 30 | 4.7 | 11 | Os05g0184000:Os05g0184000 | 29 | 6.1 | 12 | AK073568:Os01g0201600 | 29 | 6.1 | 13 | AK066896:Os03g0270200 | 29 | 6.1 | 14 | Os02g0526700:Os02g0526700 | 29 | 8.0 |
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>Os07g0103200:Os07g0103200 | Length = 243 Score = 231 bits (590), Expect = 6e-61 Identities = 116/134 (86%), Positives = 123/134 (91%) Frame = +1 Query: 571 WKGAFSVDAEGTTESETQDGGQGLLHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRIIT 750 WKGAFSVDAEGTTES+TQD GQGLLHNFVEYIK QKCVPLEDLA EF MRTQDCINRIIT Sbjct: 109 WKGAFSVDAEGTTESDTQDDGQGLLHNFVEYIKNQKCVPLEDLAAEFRMRTQDCINRIIT 168 Query: 751 LEGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPLYD 930 LEGMDRLSGVMDDRGKFIYIS EEM+AVADYIRK GRVSISHLA+NSN+FIDLEPKP Y+ Sbjct: 169 LEGMDRLSGVMDDRGKFIYISTEEMKAVADYIRKQGRVSISHLASNSNQFIDLEPKPQYN 228 Query: 931 EKEESHQDESAPAG 972 EES+ DE+A AG Sbjct: 229 --EESNLDENAAAG 240
>AK101541:Os12g0596000 | Length = 305 Score = 35.0 bits (79), Expect = 0.11 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%) Frame = +2 Query: 122 SFPSSYG---AAVPMPPARATTTASRPSHSRGN-------GCFVAALRHAACVGG 256 + P SYG AA+P P + +S P SRG GCF AA R AA V G Sbjct: 2 ALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSG 56
>AK073530:Os12g0596000 | Length = 305 Score = 35.0 bits (79), Expect = 0.11 Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 10/55 (18%) Frame = +2 Query: 122 SFPSSYG---AAVPMPPARATTTASRPSHSRGN-------GCFVAALRHAACVGG 256 + P SYG AA+P P + +S P SRG GCF AA R AA V G Sbjct: 2 ALPCSYGSHCAALPFPAVVSRAASSPPPRSRGRRPSLPPAGCFHAAPRDAALVSG 56
>AK102859:Os08g0528700 | Length = 187 Score = 30.8 bits (68), Expect = 2.1 Identities = 20/44 (45%), Positives = 23/44 (52%) Frame = +2 Query: 68 TGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPARATTTASRPSH 199 T P S PPS RC PSS G+A PAR + +S PSH Sbjct: 57 TSPTSSPPPSRTRC-----SPSSPGSA---SPARTSPRSSPPSH 92
>Os01g0242700:Os01g0242700 | Length = 458 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/80 (30%), Positives = 31/80 (38%) Frame = +2 Query: 98 CARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRR 277 CA + S PS AA P P AR +A+ P AAL +R Sbjct: 358 CAGAATASSRPSGDAAATPPPAARPPPSAAAP----------AALSRRLRAAALSPHLRH 407 Query: 278 QHPPVVMLQRMSQGVTRRTP 337 + PP V + + V RTP Sbjct: 408 RRPPTVSPRAPAPPVRPRTP 427
>Os01g0833600:Os01g0833600 | Length = 172 Score = 30.0 bits (66), Expect = 3.6 Identities = 21/56 (37%), Positives = 29/56 (51%) Frame = +2 Query: 101 ARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRR 268 A C +L FP++ AA P +R+ + R SH R VAA+ HA+ G L R Sbjct: 8 AACGAL-IFPTTASAA---PVSRSVSVDQRVSHRRRKAVAVAAVPHASSGGALLER 59
>AK099853:Os02g0190800 | Length = 389 Score = 30.0 bits (66), Expect = 3.6 Identities = 23/78 (29%), Positives = 28/78 (35%) Frame = +2 Query: 101 ARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQ 280 AR P P SYGA P PPA A G G V + RR+R + Sbjct: 10 ARFAFFPPSPPSYGAEAPPPPAAAGAGVGVEKDGGGGGVVVELTDVPRRGNVEARRLRTK 69 Query: 281 HPPVVMLQRMSQGVTRRT 334 V+ + Q R T Sbjct: 70 RGTEVVAMYVRQAGARLT 87
>AK069019:Os05g0199100 | Length = 329 Score = 29.6 bits (65), Expect = 4.7 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 6/66 (9%) Frame = +2 Query: 11 CRTKQNRGFGEGHRTLRRWTGPAG------SWPPSCARCWSLPSFPSSYGAAVPMPPARA 172 C + Q+ G R RR +G AG S S RCWS S+ SS P P AR+ Sbjct: 72 CTSGQSTG-----RRRRRRSGGAGVPADAASAAASAGRCWSSSSWRSS----PPSPAARS 122 Query: 173 TTTASR 190 T + +R Sbjct: 123 TCSTAR 128
>AK064107:Os09g0531200 | Length = 323 Score = 29.6 bits (65), Expect = 4.7 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 8/71 (11%) Frame = +2 Query: 56 LRRWTGPAGSWPPSCARCWSLPSF---PSSYGAAVPMPPARATTTASRPSHSRGNGCFV- 223 L R A W P AR ++ + P S P+PP TT + + GCFV Sbjct: 4 LSRLNASAAPWEPPVARAMAVEQYCPPPQSLLPPPPLPPVAVPTTCGCAACLQ--GCFVP 61 Query: 224 ----AALRHAA 244 AA HAA Sbjct: 62 VGVQAAFPHAA 72
>AK062594:Os07g0187900 | Length = 253 Score = 29.6 bits (65), Expect = 4.7 Identities = 32/115 (27%), Positives = 46/115 (40%), Gaps = 19/115 (16%) Frame = +2 Query: 44 GHRTLRRWTGPAGSWPPSCA--RCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGC 217 G T RR PA + PP+ A RC S + S ++ +PP A ++ S S RG+ Sbjct: 135 GSTTRRRAGSPAPASPPAPAATRCASASTASRSPSSSSRLPPCSARSSRSCWSGGRGDST 194 Query: 218 FVAALRHAACV-----------------GGQLRRVRRQHPPVVMLQRMSQGVTRR 331 + R +A GG RR RR+ + S+ V RR Sbjct: 195 RGTSTRGSATATAPSPEREVTAGCRWTSGGGRRRRRRRRSQRRSTEGRSEPVRRR 249
>Os05g0184000:Os05g0184000 | Length = 241 Score = 29.3 bits (64), Expect = 6.1 Identities = 23/70 (32%), Positives = 30/70 (42%) Frame = +2 Query: 137 YGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQHPPVVMLQRMSQ 316 +G+A P RAT SR S RG+G V R A G RR R++ + Sbjct: 133 HGSARPRQRRRATRARSRLSAGRGDG--VGGARGRAVRGSARRRPRKEETTGI------N 184 Query: 317 GVTRRTPMSP 346 G RR +P Sbjct: 185 GTARRPTSTP 194
>AK073568:Os01g0201600 | Length = 308 Score = 29.3 bits (64), Expect = 6.1 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%) Frame = +2 Query: 32 GFGEGHRTLRRWTGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPA-RATTTASRPSHSRG 208 G G T GP+G PS + + PS YGA+ P+ P+ P+ S G Sbjct: 88 GGGSSGTTPSHGGGPSGGALPSPSHGGAAPSHGGGYGASPPVTPSPGGGYGGGSPAPSHG 147 Query: 209 NGCF 220 G + Sbjct: 148 GGAY 151
>AK066896:Os03g0270200 | Length = 840 Score = 29.3 bits (64), Expect = 6.1 Identities = 31/120 (25%), Positives = 44/120 (36%), Gaps = 4/120 (3%) Frame = +2 Query: 8 PCRTKQNRGFGEGHRTLRRWTGPAGSWPPSCARCWSLPSFP---SSYGAAVPMPPARATT 178 P ++ + FG R+ RR P S+ P S PS S Y P P + Sbjct: 222 PSPSRNSISFGRQQRSSRRSVSPRRSFSPRKRSPRSTPSMSRRRSPYSRRSPSVPRHRSP 281 Query: 179 TASRPSHSRGNGCFVAALRHAACVGGQLRRVRRQHPPVVMLQRMSQGVTRRTP-MSPKAP 355 + R SH +RR+ PP V QR RR+P +P++P Sbjct: 282 SPHRRSH-----------------------IRRKSPPFVR-QRSPSPHHRRSPGRAPRSP 317
>Os02g0526700:Os02g0526700 | Length = 445 Score = 28.9 bits (63), Expect = 8.0 Identities = 27/96 (28%), Positives = 39/96 (40%), Gaps = 8/96 (8%) Frame = +2 Query: 74 PAGSWPPSCARCWSLPSFPSSYG-AAVPMPPARATTTASRP------SHSRGNGCFVAAL 232 P G PP A S PSF + A P PP R+++ ASR + + ++ Sbjct: 72 PLGGHPPPSASPSSPPSFRRAAAVVAEPPPPLRSSSGASRKLIPFGRRKASSSSSSSSSS 131 Query: 233 RHAACVGGQLRRVRRQHP-PVVMLQRMSQGVTRRTP 337 A GG L+R + P P + VT +P Sbjct: 132 ASVALAGGGLKRSKSVAPRPEEHYSSSASSVTAESP 167 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 34,909,249 Number of extensions: 831570 Number of successful extensions: 3067 Number of sequences better than 10.0: 14 Number of HSP's gapped: 3056 Number of HSP's successfully gapped: 14 Length of query: 416 Length of database: 15,399,855 Length adjustment: 103 Effective length of query: 313 Effective length of database: 11,275,632 Effective search space: 3529272816 Effective search space used: 3529272816 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)