>Q80WW9:CT116_MOUSE Uncharacterized protein C20orf116 homolog precursor - Mus musculus|
           (Mouse)
          Length = 315
 Score =  112 bits (281), Expect = 2e-24
 Identities = 60/110 (54%), Positives = 76/110 (69%)
 Frame = +1

Query: 574 KGAFSVDAEGTTESETQDGGQGLLHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRIITL 753
           K AF V+ EG +E+ T++     L  F+ YIKK K V LEDLA + G+RTQD INRI  L
Sbjct: 194 KEAFVVEEEGVSETMTEEQSHSFLTEFINYIKKSKVVLLEDLAFQMGLRTQDAINRIQDL 253

Query: 754 EGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFI 903
                L+GV+DDRGKFIYI+ EE+ AVA++IR+ GRVSI+ LA  SN  I
Sbjct: 254 LTEGTLTGVIDDRGKFIYITPEELAAVANFIRQRGRVSITELAQASNSLI 303

>Q96HY6:CT116_HUMAN Uncharacterized protein C20orf116 precursor - Homo sapiens (Human)|
          Length = 314

 Score =  112 bits (280), Expect = 3e-24
 Identities = 59/110 (53%), Positives = 76/110 (69%)
 Frame = +1

Query: 574 KGAFSVDAEGTTESETQDGGQGLLHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRIITL 753
           K AF V+ EG  E+ T++  Q  L  F+ YIK+ K V LEDLA + G+RTQD INRI  L
Sbjct: 193 KEAFVVEEEGVGETMTEEQSQSFLTEFINYIKQSKVVLLEDLASQVGLRTQDTINRIQDL 252

Query: 754 EGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFI 903
                ++GV+DDRGKFIYI+ EE+ AVA++IR+ GRVSI+ LA  SN  I
Sbjct: 253 LAEGTITGVIDDRGKFIYITPEELAAVANFIRQRGRVSIAELAQASNSLI 302

>P34623:YO87_CAEEL Uncharacterized protein ZK1236.7 - Caenorhabditis elegans|
          Length = 324

 Score = 99.0 bits (245), Expect = 4e-20
 Identities = 49/113 (43%), Positives = 74/113 (65%)
 Frame = +1

Query: 574 KGAFSVDAEGTTESETQDGGQGLLHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRIITL 753
           K +F+++ EGT   E ++  + L+ +FV+Y+K  K V +++L+  FG++++D +NR+   
Sbjct: 207 KASFAIEEEGTDAIEGEEA-ENLIRDFVDYVKTNKVVNIDELSSHFGLKSEDAVNRLQHF 265

Query: 754 EGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFIDLE 912
                + GVMDDRGKFIYIS EE  AVA +I + GRVSI  +A  SN  I LE
Sbjct: 266 IEEGLVQGVMDDRGKFIYISDEEFAAVAKFINQRGRVSIHEIAEQSNRLIRLE 318

>Q16186:ADRM1_HUMAN Protein ADRM1 - Homo sapiens (Human)|
          Length = 407

 Score = 36.2 bits (82), Expect = 0.29
 Identities = 27/69 (39%), Positives = 34/69 (49%), Gaps = 5/69 (7%)
 Frame = +2

Query: 38  GEGHRTLRRWTGPAGSWPPSCARCWS---LPSFPSSYGAAVPMP--PARATTTASRPSHS 202
           G G  +L   +GP GS   S +R  S    PS  +S   A P P  PA A+ T+  P+ S
Sbjct: 188 GPGLASLLGSSGPPGSSSSSSSRSQSAAVTPSSTTSSTRATPAPSAPAAASATSPSPAPS 247

Query: 203 RGNGCFVAA 229
            GNG   AA
Sbjct: 248 SGNGASTAA 256

>Q5QA74:RPOA_ACOGR DNA-directed RNA polymerase alpha chain - Acorus gramineus (Dwarf|
           sweet flag)
          Length = 337

 Score = 35.0 bits (79), Expect = 0.65
 Identities = 19/65 (29%), Positives = 33/65 (50%)
 Frame = +1

Query: 676 KCVPLEDLAGEFGMRTQDCINRIITLEGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKH 855
           KC+ ++    E   RT +C+ R      +D LS   +D  K  Y  IE+++ + D +RKH
Sbjct: 270 KCIFIDQ--SELPPRTYNCLKRSNIHTLLDLLSNSQEDLMKIEYFRIEDVKQILDTLRKH 327

Query: 856 GRVSI 870
             + +
Sbjct: 328 FAIDL 332

>P34288:GAP_CAEEL GTPase-activating protein GAP - Caenorhabditis elegans|
          Length = 1317

 Score = 35.0 bits (79), Expect = 0.65
 Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 2/98 (2%)
 Frame = +2

Query: 68   TGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPAR--ATTTASRPSHSRGNGCFVAALRHA 241
            + P  + PP    C   P+  S Y ++ P P AR  +T+ ASRPS    N     A  HA
Sbjct: 1158 SAPLSTNPPLAVACADQPNSSSDYASSDPSPCARNPSTSPASRPS----NLAISPAQLHA 1213

Query: 242  ACVGGQLRRVRRQHPPVVMLQRMSQGVTRRTPMSPKAP 355
                GQ       H P+      SQ +  RT +  + P
Sbjct: 1214 TSSSGQ------SHQPM----SRSQKIRLRTKLGSRDP 1241

>Q9JMB5:ADRM1_RAT Protein ADRM1 - Rattus norvegicus (Rat)|
          Length = 407

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +2

Query: 38  GEGHRTLRRWTGPAGSWPPSCARCWS---LPSFPSSYGAAVPMP--PARATTTASRPSHS 202
           G G  +L   +GP  S   S +R  S    PS  +S   A P P  PA A+ T+  P+ S
Sbjct: 188 GPGLASLLGSSGPPASSSSSSSRSQSAAVTPSSTTSSARATPAPSAPAAASATSPSPAPS 247

Query: 203 RGNGCFVAA 229
            GNG   AA
Sbjct: 248 SGNGTSTAA 256

>Q9JKV1:ADRM1_MOUSE Protein ADRM1 - Mus musculus (Mouse)|
          Length = 407

 Score = 34.3 bits (77), Expect = 1.1
 Identities = 26/69 (37%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = +2

Query: 38  GEGHRTLRRWTGPAGSWPPSCARCWS---LPSFPSSYGAAVPMP--PARATTTASRPSHS 202
           G G  +L   +GP  S   S +R  S    PS  +S   A P P  PA A+ T+  P+ S
Sbjct: 188 GPGLASLLGSSGPPASSSSSSSRSQSAAVTPSSSTSSARATPAPSAPAAASATSPSPAPS 247

Query: 203 RGNGCFVAA 229
            GNG   AA
Sbjct: 248 SGNGTSTAA 256

>Q46798:YGER_ECOLI Uncharacterized lipoprotein ygeR precursor - Escherichia coli|
          Length = 251

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +2

Query: 74  PAGSWPPSCARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCFVAALRHAACVG 253
           P  SWPP   RCW    +P++    +P   A         S  RG   + A       VG
Sbjct: 114 PKSSWPPVGQRCW---LWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYAAGAGKVVYVG 170

Query: 254 GQLR 265
            QLR
Sbjct: 171 NQLR 174

>Q8R5S2:TRMD_THETN tRNA - Thermoanaerobacter tengcongensis|
          Length = 241

 Score = 32.7 bits (73), Expect = 3.2
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 6/130 (4%)
 Frame = +1

Query: 583 FSVDAEGTTESETQDGGQGL------LHNFVEYIKKQKCVPLEDLAGEFGMRTQDCINRI 744
           FS D     +     GG G+      L + +E++K Q  +P+  L+ +  + TQ+    +
Sbjct: 41  FSKDKHKRVDDYPYGGGPGMVMMPQPLFDAIEFVKSQGNIPVYYLSPKGKIFTQEMAREL 100

Query: 745 ITLEGMDRLSGVMDDRGKFIYISIEEMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPL 924
             +E +  L G  +   + +Y  I+   ++ D+I   G ++   + +     ID      
Sbjct: 101 SKMERIALLCGHYEGIDERVYAVIDGEISIGDFILTGGELAAMVVIDAVTRLIDGVLSHP 160

Query: 925 YDEKEESHQD 954
               EES  D
Sbjct: 161 QSALEESFSD 170

>Q8N7E2:ZN645_HUMAN Zinc finger protein 645 - Homo sapiens (Human)|
          Length = 425

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = +1

Query: 820 EMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPLYDEKEESHQDESAPAGIVAE 984
           + + V+ + RKHG +++ H+ NNS+        P Y  + +S    S+P  I+ +
Sbjct: 224 QWETVSIFTRKHGNLTVDHIQNNSDSGAKKPTPPDYYPECQSQPAVSSPHHIIPQ 278

>Q9Y5T5:UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 - Homo sapiens (Human)|
          Length = 823

 Score = 32.3 bits (72), Expect = 4.2
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = +1

Query: 805 YISIEEMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPLYDEKEESHQDE 957
           Y S  ++  V DY+RK   ++    A   N  I+LE K L  EKE  ++ E
Sbjct: 125 YCSSNQLGQVVDYVRKQASITTPKPAEKDNGNIELENKKL--EKESKNEQE 173

>O22907:RH24_ARATH DEAD-box ATP-dependent RNA helicase 24 - Arabidopsis thaliana|
           (Mouse-ear cress)
          Length = 760

 Score = 32.0 bits (71), Expect = 5.5
 Identities = 24/91 (26%), Positives = 33/91 (36%)
 Frame = +2

Query: 41  EGHRTLRRWTGPAGSWPPSCARCWSLPSFPSSYGAAVPMPPARATTTASRPSHSRGNGCF 220
           E  RT      P+ S   +  R   +  F +S+ AA P  P        RPS        
Sbjct: 651 ESSRTPSSKAAPSRSGAINSVRTGVMAQFKNSFVAATPSNPQNQAYPNKRPS-------- 702

Query: 221 VAALRHAACVGGQLRRVRRQHPPVVMLQRMS 313
           +        +GG + R + Q PPV   Q  S
Sbjct: 703 LMGFVSGGTIGGDMGRTQSQAPPVAPTQNAS 733

>Q4R361:ZN645_MACFA Zinc finger protein 645 - Macaca fascicularis (Crab eating macaque)|
           (Cynomolgus monkey)
          Length = 422

 Score = 31.6 bits (70), Expect = 7.2
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = +1

Query: 820 EMQAVADYIRKHGRVSISHLANNSNEFIDLEPKPLYDEKEESHQDESAPAGIVAE 984
           + + V+ + RKHG + + H+ NNS+        P Y  + +S    S+P  I+ +
Sbjct: 221 QWETVSVFTRKHGNLIVDHIQNNSDSGAKKPSPPDYYPEYQSQPVVSSPCHIMPQ 275

>Q9QZR8:PDZD2_RAT PDZ domain-containing protein 2 - Rattus norvegicus (Rat)|
          Length = 2766

 Score = 31.2 bits (69), Expect = 9.4
 Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
 Frame = +2

Query: 83   SWPPSCARCWSLP--SFPSSYGAAVPM----PPARATTTASRPSHSRGNG 214
            S PP  +R W+ P  S PS+   AVPM     PA A   AS  S  R  G
Sbjct: 1238 STPPDSSRAWAAPGDSSPSTRRIAVPMSTGAAPATAIPQASLVSQERSRG 1287

>Q60592:MAST2_MOUSE Microtubule-associated serine/threonine-protein kinase 2 - Mus|
            musculus (Mouse)
          Length = 1734

 Score = 31.2 bits (69), Expect = 9.4
 Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
 Frame = +2

Query: 113  SLPSFPSSYGAAVPMPPARATTTASRPSHSRGNG--CFVAALRHAACVGGQLRRVRRQHP 286
            S  S P S  A  P PPA A +    PS   G+G   F   L  +  +G QL R +   P
Sbjct: 1275 SAGSIPLSPLAHTPSPPATAASPQRSPSPLSGHGSQSFPTKLHLSPPLGRQLSRPKSAEP 1334

Query: 287  P 289
            P
Sbjct: 1335 P 1335

>P21416:GAG_GALV Gag polyprotein [Contains: Core protein p15; Core protein p12; Core|
           protein p30; Core protein p10] - Gibbon ape leukemia
           virus (GALV)
          Length = 520

 Score = 31.2 bits (69), Expect = 9.4
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 16/126 (12%)
 Frame = +2

Query: 221 VAALRHAACVGGQLRRVRR-----QHPPVVMLQRMSQGVTRRTPMSPKAPXXXXXXXXXX 385
           VA L+ AA     L +VR        PP V L+R+ +   R TP  P +           
Sbjct: 325 VAGLKGAARRPTNLAKVREVLQGPAEPPSVFLERLMEAYRRYTPFDPSSEGQQAAVAMAF 384

Query: 386 XXXHSVRLMKR-HEIQG-------ELIK---TVMRK*EGRRMRSVRPKRDYWKKKLWHGR 532
               +  + K+   ++G       +L+K    V  K E    R  R K++  +K+    R
Sbjct: 385 IGQSAPDIKKKLQRLEGLQDYSLQDLVKEAEKVYHKRETEEERQEREKKEAEEKERRRDR 444

Query: 533 PRKRKL 550
           P+K+ L
Sbjct: 445 PKKKNL 450


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 202,148,525
Number of extensions: 4343430
Number of successful extensions: 12011
Number of sequences better than 10.0: 17
Number of HSP's gapped: 12002
Number of HSP's successfully gapped: 17
Length of query: 416
Length of database: 100,686,439
Length adjustment: 116
Effective length of query: 300
Effective length of database: 68,868,219
Effective search space: 20660465700
Effective search space used: 20660465700
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)