ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | FLbaf9h20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK063714:Os03g0305600 | 256 | 2e-68 | 2 | Os01g0303300:Os01g0303300 | 160 | 1e-39 | 3 | AK101693:Os05g0111200 | 77 | 3e-14 | 4 | AK069326:Os04g0653000 | 36 | 0.041 | 5 | AK059441:Os04g0653000 | 36 | 0.041 | 6 | AK119301:Os07g0571100 | 32 | 1.0 | 7 | Os03g0307700:Os03g0307700 | 31 | 1.3 | 8 | AK110083: | 31 | 1.7 | 9 | AK108607:Os10g0531900 | 31 | 1.7 | 10 | AK072037:Os01g0924400 | 31 | 1.7 | 11 | AK063256:Os04g0486300 | 31 | 1.7 | 12 | AK063900:Os11g0149400 | 30 | 2.3 | 13 | AJ276692:Os11g0149400 | 30 | 2.3 | 14 | AK121820:Os04g0650700 | 29 | 5.0 | 15 | AK068693:Os04g0650700 | 29 | 5.0 | 16 | AK061502:Os04g0650700 | 29 | 5.0 | 17 | AK062537:Os01g0613300 | 29 | 6.5 | 18 | AK059976:Os12g0171500 | 29 | 6.6 | 19 | AK119895: | 28 | 8.6 | 20 | AK111866:Os04g0565200 | 28 | 8.6 | 21 | AK103526:Os04g0459000 | 28 | 8.6 | 22 | AK071669:Os04g0440300 | 28 | 8.6 | 23 | AK069342:Os04g0642000 | 28 | 8.6 |
|---|
>AK063714:Os03g0305600 | Length = 179 Score = 256 bits (654), Expect = 2e-68 Identities = 130/178 (73%), Positives = 145/178 (81%) Frame = +2 Query: 86 GRKMSSHEARKFVEEVRGLEKNWMLELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAI 265 G SS E R F++EVRGLEKNWM++LGHPLLNRVA+SFVKAAGIGA+QAVAR+SYFMA+ Sbjct: 3 GSSNSSLETRTFLDEVRGLEKNWMVDLGHPLLNRVAESFVKAAGIGAVQAVARESYFMAM 62 Query: 266 EGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTY 445 EGE GGTGAVSD+TG+RKR+FPDLNGG S SKSAE MVKSVSKES QWGLAAG+HSGLTY Sbjct: 63 EGEGGGTGAVSDSTGARKRSFPDLNGGNS-SKSAEAMVKSVSKESLQWGLAAGLHSGLTY 121 Query: 446 GLTEVRGAHDWKNXXXXXXXXXXXXXXXXDNSSHERIVQCAITGAALSAAANVLSDIV 619 GLTE RG HDWKN D +SHER+VQCAI GAALS AANVLS I+ Sbjct: 122 GLTEARGTHDWKNSVVAGALTGAAVALTSDRASHERVVQCAIAGAALSTAANVLSGIL 179
>Os01g0303300:Os01g0303300 | Length = 263 Score = 160 bits (405), Expect = 1e-39 Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 2/178 (1%) Frame = +2 Query: 89 RKMSSHEARKFV--EEVRGLEKNWMLELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMA 262 R+MSS + EEV ++K W+++LGHPL+NRVADSF++AAG+GA +AV+R++YF+ Sbjct: 90 RRMSSSRLDTWTLKEEVASMDKRWLVDLGHPLVNRVADSFIRAAGVGAARAVSREAYFVT 149 Query: 263 IEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLT 442 +EG G T + +A KR+ + + G KS + +VKS KE+FQWGLAAG++SGLT Sbjct: 150 VEGLGGDTAGLDNAV---KRS--NFSRGDDGQKSLDAVVKSAGKEAFQWGLAAGVYSGLT 204 Query: 443 YGLTEVRGAHDWKNXXXXXXXXXXXXXXXXDNSSHERIVQCAITGAALSAAANVLSDI 616 YGL E RG HDWKN D + + +V AITGAALS+AA++LS I Sbjct: 205 YGLREARGCHDWKNSAVAGAIAGVAVALTGDTGNADHMVHFAITGAALSSAASLLSGI 262
>AK101693:Os05g0111200 | Length = 146 Score = 76.6 bits (187), Expect = 3e-14 Identities = 43/151 (28%), Positives = 68/151 (45%) Frame = +2 Query: 158 LELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDL 337 +++G+P LNR D F+K +GA + A D TF L Sbjct: 19 IDMGNPFLNRTVDGFLKIGAVGACKVAAED-------------------------TFDCL 53 Query: 338 NGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGLTEVRGAHDWKNXXXXXXXXXXX 517 + G + E M+K + KE WG AG++ G+ YG+ +RG HDWKN Sbjct: 54 HRGDVSKHKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKN-AMIGGALSGA 112 Query: 518 XXXXXDNSSHERIVQCAITGAALSAAANVLS 610 N+ ++I++ AITG A++ A ++ Sbjct: 113 LISAASNNHKDKIIKDAITGGAVATAVEFIN 143
>AK069326:Os04g0653000 | Length = 196 Score = 36.2 bits (82), Expect = 0.041 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Frame = -2 Query: 438 RPECIPAASPHWNDSLLTLFTMSSADLLLLVPPLRSGNVRFLLPVASDTAPVPPDSPSMA 259 RP+ P +SP N S LT+F S + VPP ++ + + A+ A + ++A Sbjct: 38 RPKVFPMSSPPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIA 97 Query: 258 IK-----*ESRATACIAPIPAALTKLSATRLRSGWP 166 +K + A ++P+ L +T + +G P Sbjct: 98 VKPPVMPAANATQAAVSPVLTRSLSLQSTSVATGQP 133
>AK059441:Os04g0653000 | Length = 194 Score = 36.2 bits (82), Expect = 0.041 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%) Frame = -2 Query: 438 RPECIPAASPHWNDSLLTLFTMSSADLLLLVPPLRSGNVRFLLPVASDTAPVPPDSPSMA 259 RP+ P +SP N S LT+F S + VPP ++ + + A+ A + ++A Sbjct: 36 RPKVFPMSSPPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIA 95 Query: 258 IK-----*ESRATACIAPIPAALTKLSATRLRSGWP 166 +K + A ++P+ L +T + +G P Sbjct: 96 VKPPVMPAANATQAAVSPVLTRSLSLQSTSVATGQP 131
>AK119301:Os07g0571100 | Length = 1089 Score = 31.6 bits (70), Expect = 1.0 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 697 SPNPVKSRGFASTPPLRRVLKHMNRNGLKGNGGDWPKQ 810 S P+ ++T P R+ LKH+ +G G G PKQ Sbjct: 49 SSRPISPASGSTTGPARKKLKHLGGSGSSGASGQAPKQ 86
>Os03g0307700:Os03g0307700 | Length = 579 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/84 (26%), Positives = 32/84 (38%) Frame = +2 Query: 164 LGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNG 343 LG A F A G+G+ V A+ E+GG A D+ + G Sbjct: 99 LGEAARRSDAGGFPSAGGVGSAMEVKE----AALGSENGGAPANGDSGSAMGAEGAPAGG 154 Query: 344 GTSNSKSAEDMVKSVSKESFQWGL 415 G NS E+ K V+ + + L Sbjct: 155 GDGNSAEGENTTKEVADSAMETNL 178
>AK110083: | Length = 924 Score = 30.8 bits (68), Expect = 1.7 Identities = 13/48 (27%), Positives = 21/48 (43%) Frame = +2 Query: 266 EGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQW 409 +G + G SD TG KR +P++ + S ED + +W Sbjct: 228 DGSAKGVFKRSDITGEMKRVYPEIQPEYDSDSSTEDAENRIGNVPLEW 275
>AK108607:Os10g0531900 | Length = 400 Score = 30.8 bits (68), Expect = 1.7 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Frame = +2 Query: 215 GIGAMQAVARDSYFMAIEGESGGTG---AVSDATGSRKRTFPDLNGGTSNSKSAEDMVKS 385 G G V + +M++EG G G + D+ GS RT NG S+ +ED V Sbjct: 105 GCGGAGDVDLLNAYMSLEGMGGADGLNNSDGDSRGSSMRT----NGADSSENESEDYV-G 159 Query: 386 VSKESFQWGLAAG 424 ++ WG A G Sbjct: 160 ADSQALLWGGAGG 172
>AK072037:Os01g0924400 | Length = 317 Score = 30.8 bits (68), Expect = 1.7 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%) Frame = +1 Query: 307 RQQETDVPGPQWRDEQQQ------VSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARG 468 +Q++ D G +D+QQQ V+ GE+R QG+ P + +D H + DG R Sbjct: 44 QQEQQDGGGGGGKDQQQQQQMQVVVAAAAGERRMQGLGPKRSSNKDR---HTKVDGRGRR 100 Query: 469 PRL 477 R+ Sbjct: 101 IRM 103
>AK063256:Os04g0486300 | Length = 424 Score = 30.8 bits (68), Expect = 1.7 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%) Frame = -2 Query: 426 IPAASPHWNDSLLTLFTMSSADLLLLVP-PLRSGNVRFLLPVASDTAPVPP 277 + A P D + + ++ LLLL P P + G VR L P DTA +PP Sbjct: 114 VRARIPLLRDGYVAIDSVDGLLLLLLDPDPNQEGAVRLLHPFTGDTAELPP 164
>AK063900:Os11g0149400 | Length = 119 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = +2 Query: 194 DSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAE 370 D + G+ A+ AVA D + +EG++G VS+ G+ + G +N + + Sbjct: 41 DEHQENGGVKAVAAVAADQLVLQLEGDTGNGDEVSELMGAAEEEAAACEEGKNNDECVQ 99
>AJ276692:Os11g0149400 | Length = 119 Score = 30.4 bits (67), Expect = 2.3 Identities = 15/59 (25%), Positives = 28/59 (47%) Frame = +2 Query: 194 DSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAE 370 D + G+ A+ AVA D + +EG++G VS+ G+ + G +N + + Sbjct: 41 DEHQENGGVKAVAAVAADQLVLQLEGDTGNGDEVSELMGAAEEEAAACEEGKNNDECVQ 99
>AK121820:Os04g0650700 | Length = 185 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/42 (47%), Positives = 20/42 (47%) Frame = +1 Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474 E G GE R G VP G RGR ALR R G RG R Sbjct: 40 EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 77
>AK068693:Os04g0650700 | Length = 162 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/42 (47%), Positives = 20/42 (47%) Frame = +1 Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474 E G GE R G VP G RGR ALR R G RG R Sbjct: 40 EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 77
>AK061502:Os04g0650700 | Length = 159 Score = 29.3 bits (64), Expect = 5.0 Identities = 20/42 (47%), Positives = 20/42 (47%) Frame = +1 Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474 E G GE R G VP G RGR ALR R G RG R Sbjct: 37 EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 74
>AK062537:Os01g0613300 | Length = 208 Score = 28.9 bits (63), Expect = 6.5 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 13/58 (22%) Frame = +3 Query: 231 RPSRGTPTLWPSKANLGAPERCLTR---------PAAGNGR----SRTSMEGRATASQ 365 RP++ TP L PS ++ P RC R PAAG R S + ME A +Q Sbjct: 19 RPTKPTPPLLPSTSSCRRPPRCRIRSLRPENPAPPAAGVARAVASSSSPMEMEAAQTQ 76
>AK059976:Os12g0171500 | Length = 212 Score = 28.9 bits (63), Expect = 6.6 Identities = 15/53 (28%), Positives = 21/53 (39%) Frame = +1 Query: 646 GKVLRGRNFTGLGESFFSPNPVKSRGFASTPPLRRVLKHMNRNGLKGNGGDWP 804 G+ + TG SP G + P RVL+ +R +G G WP Sbjct: 37 GRAYGEESLTGCARRSCSPAGHTGVGRGGSSPTGRVLRRRSRPATRGRGARWP 89
>AK119895: | Length = 684 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +2 Query: 287 GAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGL 451 G V++ ++ RT G + S + +++ K ++ G+A G+ G TYG+ Sbjct: 239 GVVAEQAIAQVRTVYSFAGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGI 293
>AK111866:Os04g0565200 | Length = 464 Score = 28.5 bits (62), Expect = 8.6 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +2 Query: 818 LPNGRARICG-VSGSSGIFLSNPSQSTLTKRGIREFIPLD 934 LPNG A +C V+ SS +P L + G+R FIP+D Sbjct: 144 LPNGEAFVCNCVAVSSATGSIDPGHRLLRENGLR-FIPMD 182
>AK103526:Os04g0459000 | Length = 1259 Score = 28.5 bits (62), Expect = 8.6 Identities = 18/71 (25%), Positives = 34/71 (47%) Frame = +2 Query: 239 ARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLA 418 +RDSY A G +++ ++ RT G + S + +++ K ++ G+A Sbjct: 221 SRDSYANA--------GIIAEQAIAQVRTVYSYVGESKALNSYSEAIQNTLKLGYKAGMA 272 Query: 419 AGMHSGLTYGL 451 G+ G TYG+ Sbjct: 273 KGLGIGCTYGI 283
>AK071669:Os04g0440300 | Length = 441 Score = 28.5 bits (62), Expect = 8.6 Identities = 11/35 (31%), Positives = 19/35 (54%) Frame = +1 Query: 874 LKPFPIHINQTRH*GVHTTRWLRRKSRGSSMRNGL 978 L F +H+N G H +RW+RR + ++ G+ Sbjct: 145 LDTFQLHVNNVYRWGQHASRWIRRSIKYNTKVPGI 179
>AK069342:Os04g0642000 | Length = 612 Score = 28.5 bits (62), Expect = 8.6 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = +2 Query: 287 GAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGL 451 G V++ ++ RT G + S + +++ K ++ G+A G+ G TYG+ Sbjct: 239 GVVAEQAIAQVRTVYSFAGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGI 293 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 32,232,011 Number of extensions: 816894 Number of successful extensions: 2963 Number of sequences better than 10.0: 23 Number of HSP's gapped: 2954 Number of HSP's successfully gapped: 23 Length of query: 359 Length of database: 15,399,855 Length adjustment: 102 Effective length of query: 257 Effective length of database: 11,315,673 Effective search space: 2908127961 Effective search space used: 2908127961 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
