ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9h20
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK063714:Os03g0305600 256 2e-68
2Os01g0303300:Os01g0303300 160 1e-39
3AK101693:Os05g0111200 77 3e-14
4AK069326:Os04g0653000 36 0.041
5AK059441:Os04g0653000 36 0.041
6AK119301:Os07g0571100 32 1.0
7Os03g0307700:Os03g0307700 31 1.3
8AK110083: 31 1.7
9AK108607:Os10g0531900 31 1.7
10AK072037:Os01g0924400 31 1.7
11AK063256:Os04g0486300 31 1.7
12AK063900:Os11g0149400 30 2.3
13AJ276692:Os11g0149400 30 2.3
14AK121820:Os04g0650700 29 5.0
15AK068693:Os04g0650700 29 5.0
16AK061502:Os04g0650700 29 5.0
17AK062537:Os01g0613300 29 6.5
18AK059976:Os12g0171500 29 6.6
19AK119895: 28 8.6
20AK111866:Os04g0565200 28 8.6
21AK103526:Os04g0459000 28 8.6
22AK071669:Os04g0440300 28 8.6
23AK069342:Os04g0642000 28 8.6

>AK063714:Os03g0305600 |
          Length = 179
 Score =  256 bits (654), Expect = 2e-68
 Identities = 130/178 (73%), Positives = 145/178 (81%)
 Frame = +2

Query: 86  GRKMSSHEARKFVEEVRGLEKNWMLELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAI 265
           G   SS E R F++EVRGLEKNWM++LGHPLLNRVA+SFVKAAGIGA+QAVAR+SYFMA+
Sbjct: 3   GSSNSSLETRTFLDEVRGLEKNWMVDLGHPLLNRVAESFVKAAGIGAVQAVARESYFMAM 62

Query: 266 EGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTY 445
           EGE GGTGAVSD+TG+RKR+FPDLNGG S SKSAE MVKSVSKES QWGLAAG+HSGLTY
Sbjct: 63  EGEGGGTGAVSDSTGARKRSFPDLNGGNS-SKSAEAMVKSVSKESLQWGLAAGLHSGLTY 121

Query: 446 GLTEVRGAHDWKNXXXXXXXXXXXXXXXXDNSSHERIVQCAITGAALSAAANVLSDIV 619
           GLTE RG HDWKN                D +SHER+VQCAI GAALS AANVLS I+
Sbjct: 122 GLTEARGTHDWKNSVVAGALTGAAVALTSDRASHERVVQCAIAGAALSTAANVLSGIL 179



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>Os01g0303300:Os01g0303300 |
          Length = 263

 Score =  160 bits (405), Expect = 1e-39
 Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 2/178 (1%)
 Frame = +2

Query: 89  RKMSSHEARKFV--EEVRGLEKNWMLELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMA 262
           R+MSS     +   EEV  ++K W+++LGHPL+NRVADSF++AAG+GA +AV+R++YF+ 
Sbjct: 90  RRMSSSRLDTWTLKEEVASMDKRWLVDLGHPLVNRVADSFIRAAGVGAARAVSREAYFVT 149

Query: 263 IEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLT 442
           +EG  G T  + +A    KR+  + + G    KS + +VKS  KE+FQWGLAAG++SGLT
Sbjct: 150 VEGLGGDTAGLDNAV---KRS--NFSRGDDGQKSLDAVVKSAGKEAFQWGLAAGVYSGLT 204

Query: 443 YGLTEVRGAHDWKNXXXXXXXXXXXXXXXXDNSSHERIVQCAITGAALSAAANVLSDI 616
           YGL E RG HDWKN                D  + + +V  AITGAALS+AA++LS I
Sbjct: 205 YGLREARGCHDWKNSAVAGAIAGVAVALTGDTGNADHMVHFAITGAALSSAASLLSGI 262



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>AK101693:Os05g0111200 |
          Length = 146

 Score = 76.6 bits (187), Expect = 3e-14
 Identities = 43/151 (28%), Positives = 68/151 (45%)
 Frame = +2

Query: 158 LELGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDL 337
           +++G+P LNR  D F+K   +GA +  A D                         TF  L
Sbjct: 19  IDMGNPFLNRTVDGFLKIGAVGACKVAAED-------------------------TFDCL 53

Query: 338 NGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGLTEVRGAHDWKNXXXXXXXXXXX 517
           + G  +    E M+K + KE   WG  AG++ G+ YG+  +RG HDWKN           
Sbjct: 54  HRGDVSKHKLEHMLKKMCKEGAYWGTVAGVYVGMEYGVERIRGRHDWKN-AMIGGALSGA 112

Query: 518 XXXXXDNSSHERIVQCAITGAALSAAANVLS 610
                 N+  ++I++ AITG A++ A   ++
Sbjct: 113 LISAASNNHKDKIIKDAITGGAVATAVEFIN 143



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>AK069326:Os04g0653000 |
          Length = 196

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
 Frame = -2

Query: 438 RPECIPAASPHWNDSLLTLFTMSSADLLLLVPPLRSGNVRFLLPVASDTAPVPPDSPSMA 259
           RP+  P +SP  N S LT+F   S  +   VPP ++  +  +   A+  A     + ++A
Sbjct: 38  RPKVFPMSSPPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIA 97

Query: 258 IK-----*ESRATACIAPIPAALTKLSATRLRSGWP 166
           +K       +   A ++P+      L +T + +G P
Sbjct: 98  VKPPVMPAANATQAAVSPVLTRSLSLQSTSVATGQP 133



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>AK059441:Os04g0653000 |
          Length = 194

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
 Frame = -2

Query: 438 RPECIPAASPHWNDSLLTLFTMSSADLLLLVPPLRSGNVRFLLPVASDTAPVPPDSPSMA 259
           RP+  P +SP  N S LT+F   S  +   VPP ++  +  +   A+  A     + ++A
Sbjct: 36  RPKVFPMSSPPPNPSQLTIFYGGSVCVYDSVPPEKAQAIMLIAAAAAAAASATKSNAAIA 95

Query: 258 IK-----*ESRATACIAPIPAALTKLSATRLRSGWP 166
           +K       +   A ++P+      L +T + +G P
Sbjct: 96  VKPPVMPAANATQAAVSPVLTRSLSLQSTSVATGQP 131



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>AK119301:Os07g0571100 |
          Length = 1089

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 697 SPNPVKSRGFASTPPLRRVLKHMNRNGLKGNGGDWPKQ 810
           S  P+     ++T P R+ LKH+  +G  G  G  PKQ
Sbjct: 49  SSRPISPASGSTTGPARKKLKHLGGSGSSGASGQAPKQ 86



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>Os03g0307700:Os03g0307700 |
          Length = 579

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/84 (26%), Positives = 32/84 (38%)
 Frame = +2

Query: 164 LGHPLLNRVADSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNG 343
           LG       A  F  A G+G+   V       A+  E+GG  A  D+  +         G
Sbjct: 99  LGEAARRSDAGGFPSAGGVGSAMEVKE----AALGSENGGAPANGDSGSAMGAEGAPAGG 154

Query: 344 GTSNSKSAEDMVKSVSKESFQWGL 415
           G  NS   E+  K V+  + +  L
Sbjct: 155 GDGNSAEGENTTKEVADSAMETNL 178



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>AK110083: |
          Length = 924

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 13/48 (27%), Positives = 21/48 (43%)
 Frame = +2

Query: 266 EGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQW 409
           +G + G    SD TG  KR +P++     +  S ED    +     +W
Sbjct: 228 DGSAKGVFKRSDITGEMKRVYPEIQPEYDSDSSTEDAENRIGNVPLEW 275



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>AK108607:Os10g0531900 |
          Length = 400

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = +2

Query: 215 GIGAMQAVARDSYFMAIEGESGGTG---AVSDATGSRKRTFPDLNGGTSNSKSAEDMVKS 385
           G G    V   + +M++EG  G  G   +  D+ GS  RT    NG  S+   +ED V  
Sbjct: 105 GCGGAGDVDLLNAYMSLEGMGGADGLNNSDGDSRGSSMRT----NGADSSENESEDYV-G 159

Query: 386 VSKESFQWGLAAG 424
              ++  WG A G
Sbjct: 160 ADSQALLWGGAGG 172



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>AK072037:Os01g0924400 |
          Length = 317

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
 Frame = +1

Query: 307 RQQETDVPGPQWRDEQQQ------VSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARG 468
           +Q++ D  G   +D+QQQ      V+   GE+R QG+ P  +  +D    H + DG  R 
Sbjct: 44  QQEQQDGGGGGGKDQQQQQQMQVVVAAAAGERRMQGLGPKRSSNKDR---HTKVDGRGRR 100

Query: 469 PRL 477
            R+
Sbjct: 101 IRM 103



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>AK063256:Os04g0486300 |
          Length = 424

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 426 IPAASPHWNDSLLTLFTMSSADLLLLVP-PLRSGNVRFLLPVASDTAPVPP 277
           + A  P   D  + + ++    LLLL P P + G VR L P   DTA +PP
Sbjct: 114 VRARIPLLRDGYVAIDSVDGLLLLLLDPDPNQEGAVRLLHPFTGDTAELPP 164



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>AK063900:Os11g0149400 |
          Length = 119

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 194 DSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAE 370
           D   +  G+ A+ AVA D   + +EG++G    VS+  G+ +        G +N +  +
Sbjct: 41  DEHQENGGVKAVAAVAADQLVLQLEGDTGNGDEVSELMGAAEEEAAACEEGKNNDECVQ 99



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>AJ276692:Os11g0149400 |
          Length = 119

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 15/59 (25%), Positives = 28/59 (47%)
 Frame = +2

Query: 194 DSFVKAAGIGAMQAVARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAE 370
           D   +  G+ A+ AVA D   + +EG++G    VS+  G+ +        G +N +  +
Sbjct: 41  DEHQENGGVKAVAAVAADQLVLQLEGDTGNGDEVSELMGAAEEEAAACEEGKNNDECVQ 99



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>AK121820:Os04g0650700 |
          Length = 185

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = +1

Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474
           E      G GE R  G VP G RGR ALR   R   G RG R
Sbjct: 40  EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 77



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>AK068693:Os04g0650700 |
          Length = 162

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = +1

Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474
           E      G GE R  G VP G RGR ALR   R   G RG R
Sbjct: 40  EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 77



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>AK061502:Os04g0650700 |
          Length = 159

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/42 (47%), Positives = 20/42 (47%)
 Frame = +1

Query: 349 EQQQVSGGHGEKREQGVVPVGARGRDALRPHLRTDGGARGPR 474
           E      G GE R  G VP G RGR ALR   R   G RG R
Sbjct: 37  EPAGAQAGGGEARA-GAVPAGGRGRAALR---RGGAGRRGGR 74



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>AK062537:Os01g0613300 |
          Length = 208

 Score = 28.9 bits (63), Expect = 6.5
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 13/58 (22%)
 Frame = +3

Query: 231 RPSRGTPTLWPSKANLGAPERCLTR---------PAAGNGR----SRTSMEGRATASQ 365
           RP++ TP L PS ++   P RC  R         PAAG  R    S + ME  A  +Q
Sbjct: 19  RPTKPTPPLLPSTSSCRRPPRCRIRSLRPENPAPPAAGVARAVASSSSPMEMEAAQTQ 76



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>AK059976:Os12g0171500 |
          Length = 212

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 15/53 (28%), Positives = 21/53 (39%)
 Frame = +1

Query: 646 GKVLRGRNFTGLGESFFSPNPVKSRGFASTPPLRRVLKHMNRNGLKGNGGDWP 804
           G+     + TG      SP      G   + P  RVL+  +R   +G G  WP
Sbjct: 37  GRAYGEESLTGCARRSCSPAGHTGVGRGGSSPTGRVLRRRSRPATRGRGARWP 89



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>AK119895: |
          Length = 684

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 287 GAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGL 451
           G V++   ++ RT     G +    S  + +++  K  ++ G+A G+  G TYG+
Sbjct: 239 GVVAEQAIAQVRTVYSFAGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGI 293



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>AK111866:Os04g0565200 |
          Length = 464

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = +2

Query: 818 LPNGRARICG-VSGSSGIFLSNPSQSTLTKRGIREFIPLD 934
           LPNG A +C  V+ SS     +P    L + G+R FIP+D
Sbjct: 144 LPNGEAFVCNCVAVSSATGSIDPGHRLLRENGLR-FIPMD 182



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>AK103526:Os04g0459000 |
          Length = 1259

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 18/71 (25%), Positives = 34/71 (47%)
 Frame = +2

Query: 239 ARDSYFMAIEGESGGTGAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLA 418
           +RDSY  A        G +++   ++ RT     G +    S  + +++  K  ++ G+A
Sbjct: 221 SRDSYANA--------GIIAEQAIAQVRTVYSYVGESKALNSYSEAIQNTLKLGYKAGMA 272

Query: 419 AGMHSGLTYGL 451
            G+  G TYG+
Sbjct: 273 KGLGIGCTYGI 283



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>AK071669:Os04g0440300 |
          Length = 441

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 874 LKPFPIHINQTRH*GVHTTRWLRRKSRGSSMRNGL 978
           L  F +H+N     G H +RW+RR  + ++   G+
Sbjct: 145 LDTFQLHVNNVYRWGQHASRWIRRSIKYNTKVPGI 179



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>AK069342:Os04g0642000 |
          Length = 612

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = +2

Query: 287 GAVSDATGSRKRTFPDLNGGTSNSKSAEDMVKSVSKESFQWGLAAGMHSGLTYGL 451
           G V++   ++ RT     G +    S  + +++  K  ++ G+A G+  G TYG+
Sbjct: 239 GVVAEQAIAQVRTVYSFAGESKALNSYSEAIQNTLKLGYKAGMAKGLGIGCTYGI 293


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 32,232,011
Number of extensions: 816894
Number of successful extensions: 2963
Number of sequences better than 10.0: 23
Number of HSP's gapped: 2954
Number of HSP's successfully gapped: 23
Length of query: 359
Length of database: 15,399,855
Length adjustment: 102
Effective length of query: 257
Effective length of database: 11,315,673
Effective search space: 2908127961
Effective search space used: 2908127961
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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