ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9g21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001059500.1| Oryza sativa (japonica cultivar-group) Os04g0455900 (Os04g0455900) mRNA, complete cds Length = 1985 Score = 1267 bits (639), Expect = 0.0 Identities = 1035/1167 (88%) Strand = Plus / Plus Query: 136 ccggccatggacgggctactgtccaaactccggagcctgggcgcgtaccccaaggtgaac 195 ||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 163 ccggccatggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaac 222 Query: 196 gaggacttctacagccgcaccctctccggcggcgccatcacgctcgcctcctccttcatc 255 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct: 223 gaggacttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtc 282 Query: 256 atgctcctcctcttcgtctccgagctccgattgtatcttcatgcagttacagagacaaca 315 |||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||| Sbjct: 283 atgctcctcctcttcgtctccgagctccgattatatcttcatgcggtcacagaaacaaca 342 Query: 316 ctaagggttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttcca 375 |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 343 ctaagggttgatacctcaaggggagaaacacttcgcataaattttgatgtcacctttcca 402 Query: 376 gcccttcagtgttctattattagtgttgatgtgatggacatcagtggacaagagcacctt 435 ||||||||||||||||| || || |||||| ||||||||||||||||||||||||||| Sbjct: 403 gcccttcagtgttctataataagccttgatgcaatggacatcagtggacaagagcacctt 462 Query: 436 gatgtgaaacatgatgtattcaagcagcgaatcgatgcacatggcaatgttattgcaact 495 ||||||||||||||| ||||||||||| |||| |||| ||||| ||||||||||||||| Sbjct: 463 gatgtgaaacatgatatattcaagcagagaattgatgtccatggtaatgttattgcaact 522 Query: 496 aagcaagatgcagttggtgggatgaaggtggaaaaacctttacaacatcatggtggaagg 555 ||||||||||||||||||||||||||||||||| | || |||| | ||||| || ||| Sbjct: 523 aagcaagatgcagttggtgggatgaaggtggaacagcccctacagcggcatggcggcagg 582 Query: 556 cttgaacacaatgagacctattgtggctcatgttatggtgcacaagaatctcctgaacaa 615 ||||||||||||||||||||||||||||| ||||||||||| |||||||| ||| || Sbjct: 583 cttgaacacaatgagacctattgtggctcttgttatggtgcggaagaatctgatgagcag 642 Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatca 675 ||||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 643 tgttgtaactcgtgtgaagatgttcgagaagcatacaggaaaaaaggttggggtgtatca 702 Query: 676 aatccagattcgatcgatcagtgcaaaagcgagggcttcctacaaacgataaaggatgaa 735 |||||||||| |||||| ||||||||||| || |||||||| || | |||||||||||| Sbjct: 703 aatccagatttgatcgaccagtgcaaaagggaaggcttccttcagagtataaaggatgaa 762 Query: 736 gaaggtgaaggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttc 795 ||||| ||||||||||| |||||||| || |||||| |||||||||||||||| |||||| Sbjct: 763 gaaggagaaggatgcaatatttatggtttcctggaagttaacaaggttgctggaaatttc 822 Query: 796 cactttgctccagggaaaagcttccagcagtcaaatgttcatgttcacgatctgcttcca 855 ||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||| Sbjct: 823 cactttgctccagggaaaagcttccagaaggcaaatgttcatgtccacgacttgcttcca 882 Query: 856 ttccaaaaggatagcttcaatctcagccataagataaataaattgagttttggagaaccc 915 ||||||||||| ||||||||| |||||||||| |||||||| || ||||||||| ||| | Sbjct: 883 ttccaaaaggacagcttcaatgtcagccataaaataaataagttaagttttggacaacgc 942 Query: 916 tttcctggtgtgatcaatccccttgacggggcgcaatggatccagcattcatcatatgga 975 |||||||||||| | ||||| ||||||||||| |||||||| || ||||||||||||||| Sbjct: 943 tttcctggtgtggttaatcctcttgacggggcacaatggatgcaacattcatcatatgga 1002 Query: 976 atggctcaatactttgttaaggttgttcccactgtatactctcacataaatgagcaaatt 1035 ||| |||||||| | ||||||||||||||||| ||| | |||||||||| || ||| Sbjct: 1003 atgtaccaatacttcatcaaggttgttcccactgtctacacagacataaatgaacacatt 1062 Query: 1036 attctctccaatcagttttctgtgacagaacattccagaagtggcgatagtggtcgggta 1095 ||||| || ||||||||||||||||| ||||||| |||||| | || || |||||| || Sbjct: 1063 attctttcgaatcagttttctgtgacggaacattttagaagtagtgagagcggtcggata 1122 Query: 1096 caagctcttcctggcgtgtttttcttttatgacctttcaccaattaaggtcacgtttacg 1155 || ||| ||||||| || ||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 1123 caggctgttcctggagtatttttcttttacgacctttcgccaattaaggtcacattcacg 1182 Query: 1156 gagcgccatgtctcgttcttacacttcttaactaatgtatgcgctattgttggaggtgtg 1215 || | ||||| || || || ||||||||||||||||| |||||||| |||||||| || Sbjct: 1183 gaacagcatgtgtcatttttgcacttcttaactaatgtttgcgctatagttggaggcgtc 1242 Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatggccagagggcaatcactaag 1275 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct: 1243 ttcactgtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaag 1302 Query: 1276 aagagggaactcggcaaattcacctga 1302 |||| |||| |||| ||||||| |||| Sbjct: 1303 aagatggaaatcggaaaattcaactga 1329
>dbj|AK063763.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-B02, full insert sequence Length = 1565 Score = 900 bits (454), Expect = 0.0 Identities = 784/894 (87%) Strand = Plus / Plus Query: 409 atggacatcagtggacaagagcaccttgatgtgaaacatgatgtattcaagcagcgaatc 468 |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| Sbjct: 9 atggacatcagtggacaagagcaccttgatgtgaaacatgatatattcaagcagagaatt 68 Query: 469 gatgcacatggcaatgttattgcaactaagcaagatgcagttggtgggatgaaggtggaa 528 |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 gatgtccatggtaatgttattgcaactaagcaagatgcagttggtgggatgaaggtggaa 128 Query: 529 aaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctcatgt 588 | || |||| | ||||| || |||||||||||||||||||||||||||||||| ||| Sbjct: 129 cagcccctacagcggcatggcggcaggcttgaacacaatgagacctattgtggctcttgt 188 Query: 589 tatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaagca 648 |||||||| |||||||| ||| || ||||||||||||||||||||||| || |||||| Sbjct: 189 tatggtgcggaagaatctgatgagcagtgttgtaactcgtgtgaagatgttcgagaagca 248 Query: 649 tacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagcgag 708 ||||| || ||||||||||| |||||||||||||||| |||||| ||||||||||| || Sbjct: 249 tacaggaaaaaaggttggggtgtatcaaatccagatttgatcgaccagtgcaaaagggaa 308 Query: 709 ggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggctttctg 768 |||||||| || | ||||||||||||||||| ||||||||||| |||||||| || ||| Sbjct: 309 ggcttccttcagagtataaaggatgaagaaggagaaggatgcaatatttatggtttcctg 368 Query: 769 gaaattaacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtca 828 ||| |||||||||||||||| ||||||||||||||||||||||||||||||||| || || Sbjct: 369 gaagttaacaaggttgctggaaatttccactttgctccagggaaaagcttccagaaggca 428 Query: 829 aatgttcatgttcacgatctgcttccattccaaaaggatagcttcaatctcagccataag 888 ||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||||| Sbjct: 429 aatgttcatgtccacgacttgcttccattccaaaaggacagcttcaatgtcagccataaa 488 Query: 889 ataaataaattgagttttggagaaccctttcctggtgtgatcaatccccttgacggggcg 948 |||||||| || ||||||||| ||| ||||||||||||| | ||||| ||||||||||| Sbjct: 489 ataaataagttaagttttggacaacgctttcctggtgtggttaatcctcttgacggggca 548 Query: 949 caatggatccagcattcatcatatggaatggctcaatactttgttaaggttgttcccact 1008 |||||||| || |||||||||||||||||| |||||||| | ||||||||||||||| Sbjct: 549 caatggatgcaacattcatcatatggaatgtaccaatacttcatcaaggttgttcccact 608 Query: 1009 gtatactctcacataaatgagcaaattattctctccaatcagttttctgtgacagaacat 1068 || ||| | |||||||||| || || ||||| || ||||||||||||||||| |||||| Sbjct: 609 gtctacacagacataaatgaacacatcattctttcgaatcagttttctgtgacggaacat 668 Query: 1069 tccagaagtggcgatagtggtcgggtacaagctcttcctggcgtgtttttcttttatgac 1128 | |||||| | || || |||||| |||| ||| ||||||| || ||||||||||| ||| Sbjct: 669 tttagaagtagtgagagcggtcggatacaggctgttcctggagtatttttcttttacgac 728 Query: 1129 ctttcaccaattaaggtcacgtttacggagcgccatgtctcgttcttacacttcttaact 1188 ||||| |||||||||||||| || ||||| | ||||| || || || |||||||||||| Sbjct: 729 ctttcgccaattaaggtcacattcacggaacagcatgtgtcatttttgcacttcttaact 788 Query: 1189 aatgtatgcgctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtc 1248 ||||| |||||||| |||||||| || |||||||||||||||||||||||||| ||||| Sbjct: 789 aatgtttgcgctatagttggaggcgtcttcactgtttctggaatcatagattcatttgta 848 Query: 1249 taccatggccagagggcaatcactaagaagagggaactcggcaaattcacctga 1302 |||||||||||||| ||||||| ||||||| |||| |||| ||||||| |||| Sbjct: 849 taccatggccagagagcaatcaagaagaagatggaaatcggaaaattcaactga 902
>dbj|AK121783.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094A05, full insert sequence Length = 2103 Score = 892 bits (450), Expect = 0.0 Identities = 669/741 (90%), Gaps = 2/741 (0%) Strand = Plus / Plus Query: 136 ccggccatggacgggctactgtccaaactccggagcctgggcgcgtaccccaaggtgaac 195 ||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 164 ccggccatggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaac 223 Query: 196 gaggacttctacagccgcaccctctccggcggcgccatcacgctcgcctcctccttcatc 255 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct: 224 gaggacttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtc 283 Query: 256 atgctcctcctcttcgtctccgagctccgattgtatcttcatgcagttacagagacaaca 315 |||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||| Sbjct: 284 atgctcctcctcttcgtctccgagctccgattatatcttcatgcggtcacagaaacaaca 343 Query: 316 ctaagggttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttcca 375 |||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||| Sbjct: 344 ctaagggttgatacctcaaggggagaaacacttcgcataaattttgatgtcacctttcca 403 Query: 376 gcccttcagtgttctattattagtgttgatgtgatggacatcagtggacaagagcacctt 435 ||||||||||||||||| || || |||||| ||||||||||||||||||||||||||| Sbjct: 404 gcccttcagtgttctataataagccttgatgcaatggacatcagtggacaagagcacctt 463 Query: 436 gatgtgaaacatgatgtattcaagcagcgaatcgatgcacatggcaatgttattgcaact 495 ||||||||||||||| |||||||||| |||| |||| ||||| ||||||||||||||| Sbjct: 464 gatgtgaaacatgatatattcaagca--gaattgatgtccatggtaatgttattgcaact 521 Query: 496 aagcaagatgcagttggtgggatgaaggtggaaaaacctttacaacatcatggtggaagg 555 ||||||||||||||||||||||||||||||||| | || |||| | ||||| || ||| Sbjct: 522 aagcaagatgcagttggtgggatgaaggtggaacagcccctacagcggcatggcggcagg 581 Query: 556 cttgaacacaatgagacctattgtggctcatgttatggtgcacaagaatctcctgaacaa 615 ||||||||||||||||||||||||||||| ||||||||||| | |||||| ||| || Sbjct: 582 cttgaacacaatgagacctattgtggctcttgttatggtgcggaggaatctgatgagcag 641 Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatca 675 ||||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 642 tgttgtaactcgtgtgaagatgttcgagaagcatacaggaaaaaaggttggggtgtatca 701 Query: 676 aatccagattcgatcgatcagtgcaaaagcgagggcttcctacaaacgataaaggatgaa 735 |||||||||| |||||| ||||||||||| || |||||||| || | |||||||||||| Sbjct: 702 aatccagatttgatcgaccagtgcaaaagggaaggcttccttcagagtataaaggatgaa 761 Query: 736 gaaggtgaaggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttc 795 ||||| ||||||||||| |||||||| || |||||| |||||||||||||||| |||||| Sbjct: 762 gaaggagaaggatgcaatatttatggtttcctggaagttaacaaggttgctggaaatttc 821 Query: 796 cactttgctccagggaaaagcttccagcagtcaaatgttcatgttcacgatctgcttcca 855 ||||||||||||||||||||||||||| || ||||||||||||| ||||| |||||||| Sbjct: 822 cactttgctccagggaaaagcttccagaaggcaaatgttcatgtccacgacttgcttcca 881 Query: 856 ttccaaaaggatagcttcaat 876 ||||||||||| ||||||||| Sbjct: 882 ttccaaaaggacagcttcaat 902 Score = 359 bits (181), Expect = 2e-95 Identities = 364/425 (85%) Strand = Plus / Plus Query: 878 tcagccataagataaataaattgagttttggagaaccctttcctggtgtgatcaatcccc 937 |||||||||| |||||||| || ||||||||| ||| ||||||||||||| | ||||| | Sbjct: 1022 tcagccataaaataaataagttaagttttggacaacgctttcctggtgtggttaatcctc 1081 Query: 938 ttgacggggcgcaatggatccagcattcatcatatggaatggctcaatactttgttaagg 997 |||||||||| |||||||| || |||||||||||||||||| |||||||| | |||| Sbjct: 1082 ttgacggggcacaatggatgcaacattcatcatatggaatgtaccaatacttcatcaagg 1141 Query: 998 ttgttcccactgtatactctcacataaatgagcaaattattctctccaatcagttttctg 1057 ||||||||||||| ||| | |||||||||| || |||||||| || ||||||||||||| Sbjct: 1142 ttgttcccactgtctacacagacataaatgaacacattattctttcgaatcagttttctg 1201 Query: 1058 tgacagaacattccagaagtggcgatagtggtcgggtacaagctcttcctggcgtgtttt 1117 |||| ||||||| |||||| | || || |||||| |||| ||| ||||||| || |||| Sbjct: 1202 tgacggaacattttagaagtagtgagagcggtcggatacaggctgttcctggagtatttt 1261 Query: 1118 tcttttatgacctttcaccaattaaggtcacgtttacggagcgccatgtctcgttcttac 1177 ||||||| |||||||| |||||||||||||| || ||||| | ||||| || || || | Sbjct: 1262 tcttttacgacctttcgccaattaaggtcacattcacggaacagcatgtgtcatttttgc 1321 Query: 1178 acttcttaactaatgtatgcgctattgttggaggtgtgttcactgtttctggaatcatag 1237 |||||||||||||||| |||||||| |||||||| || |||||||||||||||||||||| Sbjct: 1322 acttcttaactaatgtttgcgctatagttggaggcgtcttcactgtttctggaatcatag 1381 Query: 1238 attcgtttgtctaccatggccagagggcaatcactaagaagagggaactcggcaaattca 1297 |||| ||||| |||||||||||||| ||||||| ||||||| |||| |||| ||||||| Sbjct: 1382 attcatttgtataccatggccagagagcaatcaagaagaagatggaaatcggaaaattca 1441 Query: 1298 cctga 1302 |||| Sbjct: 1442 actga 1446
>gb|AY106972.1| Zea mays PCO143041 mRNA sequence Length = 1001 Score = 280 bits (141), Expect = 2e-71 Identities = 294/345 (85%) Strand = Plus / Plus Query: 958 cagcattcatcatatggaatggctcaatactttgttaaggttgttcccactgtatactct 1017 ||||||||||||||||||||| ||||||||| | ||||||||||| || || ||| | Sbjct: 202 cagcattcatcatatggaatgtatcaatacttcatcaaggttgttcctacagtctacacg 261 Query: 1018 cacataaatgagcaaattattctctccaatcagttttctgtgacagaacattccagaagt 1077 |||||||||| || ||||||||||| |||||||| ||||| || ||||||| |||||| Sbjct: 262 gacataaatgaacacattattctctctaatcagttctctgtaacggaacattttagaagt 321 Query: 1078 ggcgatagtggtcgggtacaagctcttcctggcgtgtttttcttttatgacctttcacca 1137 || || ||||||||| | || || |||||||| ||||| ||||||||||||||||| ||| Sbjct: 322 ggtgagagtggtcggatgcaggcccttcctggtgtgttcttcttttatgacctttctcca 381 Query: 1138 attaaggtcacgtttacggagcgccatgtctcgttcttacacttcttaactaatgtatgc 1197 || |||||||| || ||||| | ||||| || || |||||||| ||||||||||| ||| Sbjct: 382 atcaaggtcacattcacggaacaacatgtgtcatttttacactttttaactaatgtttgc 441 Query: 1198 gctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctaccatggc 1257 ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| | Sbjct: 442 gctattgttggaggtgtgttcaccgtttctggaatcatagattcgtttgtataccatagt 501 Query: 1258 cagagggcaatcactaagaagagggaactcggcaaattcacctga 1302 || || ||||||| ||||||| |||| | |||||||||| |||| Sbjct: 502 caaagagcaatcaagaagaagatggaaataggcaaattcaactga 546
>emb|CR855164.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0523F07, complete sequence Length = 111824 Score = 218 bits (110), Expect = 5e-53 Identities = 164/182 (90%) Strand = Plus / Minus Query: 695 agtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaaca 754 |||||||||| || |||||||| || | ||||||||||||||||| ||||||||||| | Sbjct: 30473 agtgcaaaagggaaggcttccttcagagtataaaggatgaagaaggagaaggatgcaata 30414 Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 ||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 30413 tttatggtttcctggaagttaacaaggttgctggaaatttccactttgctccagggaaaa 30354 Query: 815 gcttccagcagtcaaatgttcatgttcacgatctgcttccattccaaaaggatagcttca 874 |||||||| || ||||||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct: 30353 gcttccagaaggcaaatgttcatgtccacgacttgcttccattccaaaaggacagcttca 30294 Query: 875 at 876 || Sbjct: 30293 at 30292 Score = 216 bits (109), Expect = 2e-52 Identities = 139/149 (93%) Strand = Plus / Minus Query: 136 ccggccatggacgggctactgtccaaactccggagcctgggcgcgtaccccaaggtgaac 195 ||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 33410 ccggccatggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaac 33351 Query: 196 gaggacttctacagccgcaccctctccggcggcgccatcacgctcgcctcctccttcatc 255 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct: 33350 gaggacttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtc 33291 Query: 256 atgctcctcctcttcgtctccgagctccg 284 ||||||||||||||||||||||||||||| Sbjct: 33290 atgctcctcctcttcgtctccgagctccg 33262 Score = 119 bits (60), Expect = 3e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 441 gaaacatgatgtattcaagcagcgaatcgatgcacatggcaatgttattgcaactaagca 500 |||||||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 31853 gaaacatgatatattcaagcagagaattgatgtccatggtaatgttattgcaactaagca 31794 Query: 501 agatgcagttggtgggatgaaggt 524 |||||||||||||||||||||||| Sbjct: 31793 agatgcagttggtgggatgaaggt 31770 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 358 tttgatatcacctttccagcccttcagtgttctattattagtgttgatgtgatggacatc 417 |||||| |||||||||||||||||||||||||||| || || |||||| ||||||||| Sbjct: 32048 tttgatgtcacctttccagcccttcagtgttctataataagccttgatgcaatggacatc 31989 Query: 418 agtggacaagagcaccttgatgtg 441 |||||||||||||||||||||||| Sbjct: 31988 agtggacaagagcaccttgatgtg 31965 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatca 675 ||||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 30683 tgttgtaactcgtgtgaagatgttcgagaagcatacaggaaaaaaggttggggtgtatca 30624 Query: 676 aatccagattcgatcga 692 |||||||||| |||||| Sbjct: 30623 aatccagatttgatcga 30607 Score = 101 bits (51), Expect = 8e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatggccagagggcaatcactaag 1275 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct: 28877 ttcactgtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaag 28818 Query: 1276 aagagggaactcggcaaattcacctga 1302 |||| |||| |||| ||||||| |||| Sbjct: 28817 aagatggaaatcggaaaattcaactga 28791 Score = 99.6 bits (50), Expect = 3e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 284 gattgtatcttcatgcagttacagagacaacactaagggttgatacctcaagaggagaaa 343 |||| ||||||||||| || ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 32412 gattatatcttcatgcggtcacagaaacaacactaagggttgatacctcaaggggagaaa 32353 Query: 344 aacttcgcataaat 357 ||||||||||||| Sbjct: 32352 cacttcgcataaat 32339 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 1048 cagttttctgtgacagaacattccagaagtggcgatagtggtcgggtacaagctcttcct 1107 |||||||||||||| ||||||| |||||| | || || |||||| |||| ||| ||||| Sbjct: 29624 cagttttctgtgacggaacattttagaagtagtgagagcggtcggatacaggctgttcct 29565 Query: 1108 ggcgtgtttttcttttatgacctttcaccaattaaggt 1145 || || ||||||||||| |||||||| ||||||||||| Sbjct: 29564 ggagtatttttcttttacgacctttcgccaattaaggt 29527 Score = 81.8 bits (41), Expect = 8e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 544 catggtggaaggcttgaacacaatgagacctattgtggctcatgttatggtgc 596 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 31405 catggcggcaggcttgaacacaatgagacctattgtggctcttgttatggtgc 31353 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 878 tcagccataagataaataaattgagttttggagaaccctttcctggtgtgatcaatcccc 937 |||||||||| |||||||| || ||||||||| ||| ||||||||||||| | ||||| | Sbjct: 30172 tcagccataaaataaataagttaagttttggacaacgctttcctggtgtggttaatcctc 30113 Query: 938 ttgacggg 945 |||||||| Sbjct: 30112 ttgacggg 30105 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1177 cacttcttaactaatgtatgcgctattgttggaggt 1212 ||||||||||||||||| |||||||| ||||||||| Sbjct: 29297 cacttcttaactaatgtttgcgctatagttggaggt 29262 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Minus Query: 995 aggttgttcccactgtatactctcacataaatgagcaaattattctctccaatcag 1050 |||||||||||||||| ||| | |||||||||| || |||||||| || |||||| Sbjct: 29796 aggttgttcccactgtctacacagacataaatgaacacattattctttcgaatcag 29741 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Minus Query: 944 gggcgcaatggatccagcattcatcatatggaatg 978 |||| |||||||| || |||||||||||||||||| Sbjct: 29975 gggcacaatggatgcaacattcatcatatggaatg 29941
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 218 bits (110), Expect = 5e-53 Identities = 164/182 (90%) Strand = Plus / Minus Query: 695 agtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaaca 754 |||||||||| || |||||||| || | ||||||||||||||||| ||||||||||| | Sbjct: 22783713 agtgcaaaagggaaggcttccttcagagtataaaggatgaagaaggagaaggatgcaata 22783654 Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 ||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 22783653 tttatggtttcctggaagttaacaaggttgctggaaatttccactttgctccagggaaaa 22783594 Query: 815 gcttccagcagtcaaatgttcatgttcacgatctgcttccattccaaaaggatagcttca 874 |||||||| || ||||||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct: 22783593 gcttccagaaggcaaatgttcatgtccacgacttgcttccattccaaaaggacagcttca 22783534 Query: 875 at 876 || Sbjct: 22783533 at 22783532 Score = 216 bits (109), Expect = 2e-52 Identities = 139/149 (93%) Strand = Plus / Minus Query: 136 ccggccatggacgggctactgtccaaactccggagcctgggcgcgtaccccaaggtgaac 195 ||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 22786649 ccggccatggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaac 22786590 Query: 196 gaggacttctacagccgcaccctctccggcggcgccatcacgctcgcctcctccttcatc 255 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct: 22786589 gaggacttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtc 22786530 Query: 256 atgctcctcctcttcgtctccgagctccg 284 ||||||||||||||||||||||||||||| Sbjct: 22786529 atgctcctcctcttcgtctccgagctccg 22786501 Score = 119 bits (60), Expect = 3e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 441 gaaacatgatgtattcaagcagcgaatcgatgcacatggcaatgttattgcaactaagca 500 |||||||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 22785092 gaaacatgatatattcaagcagagaattgatgtccatggtaatgttattgcaactaagca 22785033 Query: 501 agatgcagttggtgggatgaaggt 524 |||||||||||||||||||||||| Sbjct: 22785032 agatgcagttggtgggatgaaggt 22785009 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 358 tttgatatcacctttccagcccttcagtgttctattattagtgttgatgtgatggacatc 417 |||||| |||||||||||||||||||||||||||| || || |||||| ||||||||| Sbjct: 22785287 tttgatgtcacctttccagcccttcagtgttctataataagccttgatgcaatggacatc 22785228 Query: 418 agtggacaagagcaccttgatgtg 441 |||||||||||||||||||||||| Sbjct: 22785227 agtggacaagagcaccttgatgtg 22785204 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatca 675 ||||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 22783923 tgttgtaactcgtgtgaagatgttcgagaagcatacaggaaaaaaggttggggtgtatca 22783864 Query: 676 aatccagattcgatcga 692 |||||||||| |||||| Sbjct: 22783863 aatccagatttgatcga 22783847 Score = 101 bits (51), Expect = 8e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatggccagagggcaatcactaag 1275 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct: 22782117 ttcactgtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaag 22782058 Query: 1276 aagagggaactcggcaaattcacctga 1302 |||| |||| |||| ||||||| |||| Sbjct: 22782057 aagatggaaatcggaaaattcaactga 22782031 Score = 99.6 bits (50), Expect = 3e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 284 gattgtatcttcatgcagttacagagacaacactaagggttgatacctcaagaggagaaa 343 |||| ||||||||||| || ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 22785651 gattatatcttcatgcggtcacagaaacaacactaagggttgatacctcaaggggagaaa 22785592 Query: 344 aacttcgcataaat 357 ||||||||||||| Sbjct: 22785591 cacttcgcataaat 22785578 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 1048 cagttttctgtgacagaacattccagaagtggcgatagtggtcgggtacaagctcttcct 1107 |||||||||||||| ||||||| |||||| | || || |||||| |||| ||| ||||| Sbjct: 22782864 cagttttctgtgacggaacattttagaagtagtgagagcggtcggatacaggctgttcct 22782805 Query: 1108 ggcgtgtttttcttttatgacctttcaccaattaaggt 1145 || || ||||||||||| |||||||| ||||||||||| Sbjct: 22782804 ggagtatttttcttttacgacctttcgccaattaaggt 22782767 Score = 81.8 bits (41), Expect = 8e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 544 catggtggaaggcttgaacacaatgagacctattgtggctcatgttatggtgc 596 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 22784644 catggcggcaggcttgaacacaatgagacctattgtggctcttgttatggtgc 22784592 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 878 tcagccataagataaataaattgagttttggagaaccctttcctggtgtgatcaatcccc 937 |||||||||| |||||||| || ||||||||| ||| ||||||||||||| | ||||| | Sbjct: 22783412 tcagccataaaataaataagttaagttttggacaacgctttcctggtgtggttaatcctc 22783353 Query: 938 ttgacggg 945 |||||||| Sbjct: 22783352 ttgacggg 22783345 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1177 cacttcttaactaatgtatgcgctattgttggaggt 1212 ||||||||||||||||| |||||||| ||||||||| Sbjct: 22782537 cacttcttaactaatgtttgcgctatagttggaggt 22782502 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Minus Query: 995 aggttgttcccactgtatactctcacataaatgagcaaattattctctccaatcag 1050 |||||||||||||||| ||| | |||||||||| || |||||||| || |||||| Sbjct: 22783036 aggttgttcccactgtctacacagacataaatgaacacattattctttcgaatcag 22782981 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Minus Query: 944 gggcgcaatggatccagcattcatcatatggaatg 978 |||| |||||||| || |||||||||||||||||| Sbjct: 22783215 gggcacaatggatgcaacattcatcatatggaatg 22783181
>emb|AL731584.3|OSJN00224 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0006M15, complete sequence Length = 143109 Score = 218 bits (110), Expect = 5e-53 Identities = 164/182 (90%) Strand = Plus / Minus Query: 695 agtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaaca 754 |||||||||| || |||||||| || | ||||||||||||||||| ||||||||||| | Sbjct: 120909 agtgcaaaagggaaggcttccttcagagtataaaggatgaagaaggagaaggatgcaata 120850 Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 ||||||| || |||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 120849 tttatggtttcctggaagttaacaaggttgctggaaatttccactttgctccagggaaaa 120790 Query: 815 gcttccagcagtcaaatgttcatgttcacgatctgcttccattccaaaaggatagcttca 874 |||||||| || ||||||||||||| ||||| ||||||||||||||||||| ||||||| Sbjct: 120789 gcttccagaaggcaaatgttcatgtccacgacttgcttccattccaaaaggacagcttca 120730 Query: 875 at 876 || Sbjct: 120729 at 120728 Score = 216 bits (109), Expect = 2e-52 Identities = 139/149 (93%) Strand = Plus / Minus Query: 136 ccggccatggacgggctactgtccaaactccggagcctgggcgcgtaccccaaggtgaac 195 ||||||||||| ||||| |||||||| ||||||||||||| ||| ||||||||||||||| Sbjct: 123845 ccggccatggaggggctcctgtccaagctccggagcctggacgcctaccccaaggtgaac 123786 Query: 196 gaggacttctacagccgcaccctctccggcggcgccatcacgctcgcctcctccttcatc 255 |||||||||||||||||||| |||||||||||| ||||||||||||||||||| || || Sbjct: 123785 gaggacttctacagccgcacgctctccggcggcatcatcacgctcgcctcctccgtcgtc 123726 Query: 256 atgctcctcctcttcgtctccgagctccg 284 ||||||||||||||||||||||||||||| Sbjct: 123725 atgctcctcctcttcgtctccgagctccg 123697 Score = 119 bits (60), Expect = 3e-23 Identities = 78/84 (92%) Strand = Plus / Minus Query: 441 gaaacatgatgtattcaagcagcgaatcgatgcacatggcaatgttattgcaactaagca 500 |||||||||| ||||||||||| |||| |||| ||||| |||||||||||||||||||| Sbjct: 122288 gaaacatgatatattcaagcagagaattgatgtccatggtaatgttattgcaactaagca 122229 Query: 501 agatgcagttggtgggatgaaggt 524 |||||||||||||||||||||||| Sbjct: 122228 agatgcagttggtgggatgaaggt 122205 Score = 111 bits (56), Expect = 8e-21 Identities = 77/84 (91%) Strand = Plus / Minus Query: 358 tttgatatcacctttccagcccttcagtgttctattattagtgttgatgtgatggacatc 417 |||||| |||||||||||||||||||||||||||| || || |||||| ||||||||| Sbjct: 122483 tttgatgtcacctttccagcccttcagtgttctataataagccttgatgcaatggacatc 122424 Query: 418 agtggacaagagcaccttgatgtg 441 |||||||||||||||||||||||| Sbjct: 122423 agtggacaagagcaccttgatgtg 122400 Score = 105 bits (53), Expect = 5e-19 Identities = 71/77 (92%) Strand = Plus / Minus Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatca 675 ||||||||||||||||||||||| || ||||||||||| || ||||||||||| |||||| Sbjct: 121119 tgttgtaactcgtgtgaagatgttcgagaagcatacaggaaaaaaggttggggtgtatca 121060 Query: 676 aatccagattcgatcga 692 |||||||||| |||||| Sbjct: 121059 aatccagatttgatcga 121043 Score = 101 bits (51), Expect = 8e-18 Identities = 78/87 (89%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatggccagagggcaatcactaag 1275 |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||| Sbjct: 119313 ttcactgtttctggaatcatagattcatttgtataccatggccagagagcaatcaagaag 119254 Query: 1276 aagagggaactcggcaaattcacctga 1302 |||| |||| |||| ||||||| |||| Sbjct: 119253 aagatggaaatcggaaaattcaactga 119227 Score = 99.6 bits (50), Expect = 3e-17 Identities = 68/74 (91%) Strand = Plus / Minus Query: 284 gattgtatcttcatgcagttacagagacaacactaagggttgatacctcaagaggagaaa 343 |||| ||||||||||| || ||||| |||||||||||||||||||||||||| ||||||| Sbjct: 122847 gattatatcttcatgcggtcacagaaacaacactaagggttgatacctcaaggggagaaa 122788 Query: 344 aacttcgcataaat 357 ||||||||||||| Sbjct: 122787 cacttcgcataaat 122774 Score = 83.8 bits (42), Expect = 2e-12 Identities = 84/98 (85%) Strand = Plus / Minus Query: 1048 cagttttctgtgacagaacattccagaagtggcgatagtggtcgggtacaagctcttcct 1107 |||||||||||||| ||||||| |||||| | || || |||||| |||| ||| ||||| Sbjct: 120060 cagttttctgtgacggaacattttagaagtagtgagagcggtcggatacaggctgttcct 120001 Query: 1108 ggcgtgtttttcttttatgacctttcaccaattaaggt 1145 || || ||||||||||| |||||||| ||||||||||| Sbjct: 120000 ggagtatttttcttttacgacctttcgccaattaaggt 119963 Score = 81.8 bits (41), Expect = 8e-12 Identities = 50/53 (94%) Strand = Plus / Minus Query: 544 catggtggaaggcttgaacacaatgagacctattgtggctcatgttatggtgc 596 ||||| || |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 121840 catggcggcaggcttgaacacaatgagacctattgtggctcttgttatggtgc 121788 Score = 71.9 bits (36), Expect = 7e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 878 tcagccataagataaataaattgagttttggagaaccctttcctggtgtgatcaatcccc 937 |||||||||| |||||||| || ||||||||| ||| ||||||||||||| | ||||| | Sbjct: 120608 tcagccataaaataaataagttaagttttggacaacgctttcctggtgtggttaatcctc 120549 Query: 938 ttgacggg 945 |||||||| Sbjct: 120548 ttgacggg 120541 Score = 56.0 bits (28), Expect = 4e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 1177 cacttcttaactaatgtatgcgctattgttggaggt 1212 ||||||||||||||||| |||||||| ||||||||| Sbjct: 119733 cacttcttaactaatgtttgcgctatagttggaggt 119698 Score = 48.1 bits (24), Expect = 0.11 Identities = 48/56 (85%) Strand = Plus / Minus Query: 995 aggttgttcccactgtatactctcacataaatgagcaaattattctctccaatcag 1050 |||||||||||||||| ||| | |||||||||| || |||||||| || |||||| Sbjct: 120232 aggttgttcccactgtctacacagacataaatgaacacattattctttcgaatcag 120177 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Minus Query: 944 gggcgcaatggatccagcattcatcatatggaatg 978 |||| |||||||| || |||||||||||||||||| Sbjct: 120411 gggcacaatggatgcaacattcatcatatggaatg 120377
>gb|BT017531.1| Zea mays clone EL01N0421H02.c mRNA sequence Length = 615 Score = 182 bits (92), Expect = 3e-42 Identities = 161/184 (87%) Strand = Plus / Plus Query: 1119 cttttatgacctttcaccaattaaggtcacgtttacggagcgccatgtctcgttcttaca 1178 ||||||||||||||| ||||| |||||||| || ||||| | ||||| || || ||||| Sbjct: 9 cttttatgacctttctccaatcaaggtcacattcacggaacaacatgtgtcatttttaca 68 Query: 1179 cttcttaactaatgtatgcgctattgttggaggtgtgttcactgtttctggaatcataga 1238 ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 69 ctttttaactaatgtttgcgctattgttggaggtgtgttcaccgtttctggaatcataga 128 Query: 1239 ttcgtttgtctaccatggccagagggcaatcactaagaagagggaactcggcaaattcac 1298 ||||||||| |||||| | || || ||||||| ||||||| |||| |||||||||||| Sbjct: 129 ttcgtttgtataccatagtcaaagagcaatcaagaagaagatggaaatcggcaaattcaa 188 Query: 1299 ctga 1302 |||| Sbjct: 189 ctga 192
>emb|CT830534.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA121J18, full insert sequence Length = 1483 Score = 127 bits (64), Expect = 1e-25 Identities = 112/128 (87%) Strand = Plus / Plus Query: 166 cggagcctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggc 225 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 110 cggagcctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggc 169 Query: 226 ggcgccatcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgagctccga 285 ||| |||||| |||||||||| || ||| |||||||||||| |||||||| |||| Sbjct: 170 ggcctcatcaccatcgcctcctcgctcgccatcctcctcctcttcctctccgagatccgg 229 Query: 286 ttgtatct 293 ||||||| Sbjct: 230 ctgtatct 237 Score = 63.9 bits (32), Expect = 2e-06 Identities = 56/64 (87%) Strand = Plus / Plus Query: 1193 tatgcgctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctacc 1252 |||| |||||||||||||| | ||||||||| |||| ||||||||||| ||||||| || Sbjct: 1137 tatgtgctattgttggagggattttcactgttgctggcatcatagattcttttgtctccc 1196 Query: 1253 atgg 1256 |||| Sbjct: 1197 atgg 1200
>dbj|AK228108.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL14-58-O14 Length = 1540 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||||| ||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 747 tcgtgtgaggatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 806 Query: 685 tcgatcgatcagtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaa 744 | ||| || ||||| ||| | || || || ||||||| |||||||||||||||||||| Sbjct: 807 ttgattgaccagtgtaaacgagaaggttttctacaaagagtaaaggatgaagaaggtgaa 866 Query: 745 ggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttccactttgct 804 || || || || ||||| || |||| | || ||||| |||||||| |||||||||||| Sbjct: 867 gggtgtaatatatatgggttcttggaggtcaataaggtggctgggaacttccactttgct 926 Query: 805 ccagggaaaagcttccagcagtcaaatgttcatgttcacgatct 848 || ||||||||||| || ||||| || |||||||||||||| Sbjct: 927 cctgggaaaagctttcatcagtcgggcgtgcatgttcacgatct 970 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcac 1220 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 1293 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcac 1342
>ref|NM_103301.2| Arabidopsis thaliana unknown protein (AT1G36050) mRNA, complete cds Length = 1611 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||||| ||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 747 tcgtgtgaggatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 806 Query: 685 tcgatcgatcagtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaa 744 | ||| || ||||| ||| | || || || ||||||| |||||||||||||||||||| Sbjct: 807 ttgattgaccagtgtaaacgagaaggttttctacaaagagtaaaggatgaagaaggtgaa 866 Query: 745 ggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttccactttgct 804 || || || || ||||| || |||| | || ||||| |||||||| |||||||||||| Sbjct: 867 gggtgtaatatatatgggttcttggaggtcaataaggtggctgggaacttccactttgct 926 Query: 805 ccagggaaaagcttccagcagtcaaatgttcatgttcacgatct 848 || ||||||||||| || ||||| || |||||||||||||| Sbjct: 927 cctgggaaaagctttcatcagtcgggcgtgcatgttcacgatct 970 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcac 1220 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 1293 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcac 1342
>gb|BT003147.1| Arabidopsis thaliana At1g36050 mRNA, complete cds Length = 1161 Score = 127 bits (64), Expect = 1e-25 Identities = 184/224 (82%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||||| ||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 484 tcgtgtgaggatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 543 Query: 685 tcgatcgatcagtgcaaaagcgagggcttcctacaaacgataaaggatgaagaaggtgaa 744 | ||| || ||||| ||| | || || || ||||||| |||||||||||||||||||| Sbjct: 544 ttgattgaccagtgtaaacgagaaggttttctacaaagagtaaaggatgaagaaggtgaa 603 Query: 745 ggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttccactttgct 804 || || || || ||||| || |||| | || ||||| |||||||| |||||||||||| Sbjct: 604 gggtgtaatatatatgggttcttggaggtcaataaggtggctgggaacttccactttgct 663 Query: 805 ccagggaaaagcttccagcagtcaaatgttcatgttcacgatct 848 || ||||||||||| || ||||| || |||||||||||||| Sbjct: 664 cctgggaaaagctttcatcagtcgggcgtgcatgttcacgatct 707 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcac 1220 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 1030 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcac 1079
>gb|AC119748.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0042L15, from chromosome 3, complete sequence Length = 172475 Score = 125 bits (63), Expect = 6e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 166 cggagcctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggc 225 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 151407 cggagcctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggc 151348 Query: 226 ggcgccatcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgagctccg 284 ||| |||||| |||||||||| || ||| |||||||||||| |||||||| |||| Sbjct: 151347 ggcctcatcaccatcgcctcctcgctcgccatcctcctcctcttcctctccgagatccg 151289 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatgg 1256 ||||||||| |||| ||||||||||| |||||||||||||| Sbjct: 145975 ttcactgttgctggcatcatagattcttttgtctaccatgg 145935
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 125 bits (63), Expect = 6e-25 Identities = 105/119 (88%) Strand = Plus / Minus Query: 166 cggagcctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggc 225 |||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11597598 cggagcctcgacgcctaccccaaggtgaacgaggacttctacagccgcaccctctccggc 11597539 Query: 226 ggcgccatcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgagctccg 284 ||| |||||| |||||||||| || ||| |||||||||||| |||||||| |||| Sbjct: 11597538 ggcctcatcaccatcgcctcctcgctcgccatcctcctcctcttcctctccgagatccg 11597480 Score = 58.0 bits (29), Expect = 1e-04 Identities = 38/41 (92%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatgg 1256 ||||||||| |||| ||||||||||| |||||||||||||| Sbjct: 11592166 ttcactgttgctggcatcatagattcttttgtctaccatgg 11592126 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 1086424 cgtccgtccgtccccaacgcc 1086444 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 1087214 cgtccgtccgtccccaacgcc 1087194
>gb|AC189414.1| Brassica rapa subsp. pekinensis clone KBrB061K11, complete sequence Length = 158635 Score = 97.6 bits (49), Expect = 1e-16 Identities = 88/101 (87%) Strand = Plus / Minus Query: 181 taccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgccatcacgctc 240 ||||||||| | ||||| ||||||||||||||||| |||||||||||| |||||||| Sbjct: 99516 taccccaagatcaacgacgacttctacagccgcactctctccggcggcttgatcacgctt 99457 Query: 241 gcctcctccttcatcatgctcctcctcttcgtctccgagct 281 || |||||| || |||||||| |||||||| |||||||||| Sbjct: 99456 gcttcctccctcgtcatgctcatcctcttcttctccgagct 99416 Score = 48.1 bits (24), Expect = 0.11 Identities = 45/52 (86%) Strand = Plus / Minus Query: 616 tgttgtaactcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggg 667 ||||||||||| ||||| || || || ||||| || |||||||||||||||| Sbjct: 98715 tgttgtaactcttgtgaggaagttcgggaagcttatagaaagaaaggttggg 98664 Score = 44.1 bits (22), Expect = 1.6 Identities = 40/46 (86%) Strand = Plus / Minus Query: 1170 gttcttacacttcttaactaatgtatgcgctattgttggaggtgtg 1215 |||||| |||||| | || ||||| ||||||||||| ||||||||| Sbjct: 97479 gttcttgcacttcctcaccaatgtttgcgctattgtaggaggtgtg 97434 Score = 42.1 bits (21), Expect = 6.5 Identities = 36/41 (87%) Strand = Plus / Minus Query: 1216 ttcactgtttctggaatcatagattcgtttgtctaccatgg 1256 ||||| |||||||||||||| ||||| ||||| || ||||| Sbjct: 97303 ttcacggtttctggaatcattgattcatttgtatatcatgg 97263
>ref|NM_001062433.1| Oryza sativa (japonica cultivar-group) Os05g0490200 (Os05g0490200) mRNA, complete cds Length = 1874 Score = 95.6 bits (48), Expect = 5e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 172 ctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgcc 231 |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 242 ctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtc 301 Query: 232 atcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgag 279 ||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct: 302 gtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 349
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 95.6 bits (48), Expect = 5e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 172 ctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgcc 231 |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 4645 ctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtc 4704 Query: 232 atcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgag 279 ||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct: 4705 gtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 4752
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 95.6 bits (48), Expect = 5e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 172 ctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgcc 231 |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 23936156 ctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtc 23936215 Query: 232 atcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgag 279 ||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct: 23936216 gtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 23936263
>dbj|AK105601.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A06, full insert sequence Length = 1630 Score = 95.6 bits (48), Expect = 5e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 172 ctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgcc 231 |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 230 ctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtc 289 Query: 232 atcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgag 279 ||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct: 290 gtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 337
>dbj|AK101147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033026P06, full insert sequence Length = 1874 Score = 95.6 bits (48), Expect = 5e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 172 ctgggcgcgtaccccaaggtgaacgaggacttctacagccgcaccctctccggcggcgcc 231 |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| | Sbjct: 243 ctggacgcgtaccccaaggtgaacgaggacttctacaagcggacgctctccggcggcgtc 302 Query: 232 atcacgctcgcctcctccttcatcatgctcctcctcttcgtctccgag 279 ||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct: 303 gtcacggtcgtcgcctccgtcgtcatgctgctgctgttcgtctccgag 350
>emb|BX815508.1|CNS0ABCC Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZG09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1473 Score = 89.7 bits (45), Expect = 3e-14 Identities = 186/228 (81%), Gaps = 5/228 (2%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgt-atcaaatcc-ag 682 |||||||| ||||| ||||||||||| ||||||| ||||||||| || | | ||||| || Sbjct: 713 tcgtgtgaggatgttcgtgaagcatatagaaagagaggttggggggttacctaatcccag 772 Query: 683 attcgatcgatcagtgcaaaagcgag--ggcttcctacaaacgataaaggatgaagaagg 740 ||| ||| || ||||| ||| ||||| || || ||||||| |||||||||||||||| Sbjct: 773 atttgattgaccagtgtaaa-gcgagaaggttttctacaaagagtaaaggatgaagaagg 831 Query: 741 tgaaggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttccactt 800 |||||| || || || ||||| || |||| | || ||||| |||||||| |||||||| Sbjct: 832 tgaagggtgtaatatatatgggttcttggaggtcaataaggtggctgggaacttccactt 891 Query: 801 tgctccagggaaaagcttccagcagtcaaatgttcatgttcacgatct 848 |||||| ||||||||||| || ||||| || |||||||||||||| Sbjct: 892 tgctcctgggaaaagctttcatcagtcgggcgtgcatgttcacgatct 939 Score = 48.1 bits (24), Expect = 0.11 Identities = 57/68 (83%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcactgtttctgga 1230 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| || || || Sbjct: 1262 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcacagtgtccggg 1321 Query: 1231 atcataga 1238 |||||||| Sbjct: 1322 atcataga 1329
>emb|BX816168.1|CNS0AE9B Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH31ZG10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1097 Score = 85.7 bits (43), Expect = 5e-13 Identities = 158/195 (81%), Gaps = 1/195 (0%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||| ||||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 267 tcgtgttaagatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 326 Query: 685 tcgatcgatcagtgcaaaagc-gagggcttcctacaaacgataaaggatgaagaaggtga 743 | ||| | |||| ||| | || || || ||||||| ||||||||||||||||||| Sbjct: 327 ttgatttaccagtttaaacgaagaaggttttctacaaagagtaaaggatgaagaaggtga 386 Query: 744 aggatgcaacatttatggctttctggaaattaacaaggttgctgggaatttccactttgc 803 ||| || || || ||||| || |||| | || ||||| |||||||| ||||||||| | Sbjct: 387 agggtgtaatatatatgggttattggaggtcaataaggtggctgggaacttccacttttc 446 Query: 804 tccagggaaaagctt 818 ||| ||||||||||| Sbjct: 447 tcctgggaaaagctt 461
>gb|AC006228.5|AC006228 Genomic sequence for Arabidopsis thaliana BAC F5J5, complete sequence Length = 104806 Score = 79.8 bits (40), Expect = 3e-11 Identities = 103/124 (83%) Strand = Plus / Plus Query: 725 taaaggatgaagaaggtgaaggatgcaacatttatggctttctggaaattaacaaggttg 784 |||||||||||||||||||||| || || || ||||| || |||| | || ||||| | Sbjct: 12714 taaaggatgaagaaggtgaagggtgtaatatatatgggttcttggaggtcaataaggtgg 12773 Query: 785 ctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgttcatgttcacg 844 ||||||| |||||||||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 12774 ctgggaacttccactttgctcctgggaaaagctttcatcagtcgggcgtgcatgttcacg 12833 Query: 845 atct 848 |||| Sbjct: 12834 atct 12837 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||||| ||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 12362 tcgtgtgaggatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 12421 Query: 685 t 685 | Sbjct: 12422 t 12422
>gb|AC021666.5|AC021666 Arabidopsis thaliana chromosome 1 BAC T22A15 genomic sequence, complete sequence Length = 93859 Score = 79.8 bits (40), Expect = 3e-11 Identities = 103/124 (83%) Strand = Plus / Minus Query: 725 taaaggatgaagaaggtgaaggatgcaacatttatggctttctggaaattaacaaggttg 784 |||||||||||||||||||||| || || || ||||| || |||| | || ||||| | Sbjct: 22995 taaaggatgaagaaggtgaagggtgtaatatatatgggttcttggaggtcaataaggtgg 22936 Query: 785 ctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgttcatgttcacg 844 ||||||| |||||||||||||| ||||||||||| || ||||| || |||||||||| Sbjct: 22935 ctgggaacttccactttgctcctgggaaaagctttcatcagtcgggcgtgcatgttcacg 22876 Query: 845 atct 848 |||| Sbjct: 22875 atct 22872 Score = 65.9 bits (33), Expect = 4e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 625 tcgtgtgaagatgtccgtgaagcatacagaaagaaaggttggggcgtatcaaatccagat 684 |||||||| ||||| ||||||||||| ||||||||||||||||| || | ||||||||| Sbjct: 23347 tcgtgtgaggatgttcgtgaagcatatagaaagaaaggttggggggttactaatccagat 23288 Query: 685 t 685 | Sbjct: 23287 t 23287
>ref|NM_001056495.1| Oryza sativa (japonica cultivar-group) Os03g0321400 (Os03g0321400) mRNA, partial cds Length = 517 Score = 71.9 bits (36), Expect = 7e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1193 tatgcgctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctacc 1252 |||| |||||||||||||| | ||||||||| |||| ||||||||||| |||||||||| Sbjct: 143 tatgtgctattgttggagggattttcactgttgctggcatcatagattcttttgtctacc 202 Query: 1253 atgg 1256 |||| Sbjct: 203 atgg 206
>dbj|AK059138.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-H09, full insert sequence Length = 518 Score = 71.9 bits (36), Expect = 7e-09 Identities = 57/64 (89%) Strand = Plus / Plus Query: 1193 tatgcgctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctacc 1252 |||| |||||||||||||| | ||||||||| |||| ||||||||||| |||||||||| Sbjct: 144 tatgtgctattgttggagggattttcactgttgctggcatcatagattcttttgtctacc 203 Query: 1253 atgg 1256 |||| Sbjct: 204 atgg 207
>ref|XM_001066442.1| PREDICTED: Rattus norvegicus ERGIC and golgi 3 (predicted) (Ergic3_predicted), mRNA Length = 1466 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 787 aacaaggtggctgggaacttccactttgcccctgggaagagcttccagcagtc 839
>ref|XM_215908.4| PREDICTED: Rattus norvegicus ERGIC and golgi 3 (predicted) (Ergic3_predicted), mRNA Length = 1466 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| |||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 787 aacaaggtggctgggaacttccactttgcccctgggaagagcttccagcagtc 839
>ref|XM_534403.2| PREDICTED: Canis familiaris similar to Serologically defined breast cancer antigen NY-BR-84, transcript variant 1 (LOC477212), mRNA Length = 1180 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 522 aacaaggtggctggaaacttccactttgctcccgggaagagcttccagcagtc 574
>ref|XM_859507.1| PREDICTED: Canis familiaris similar to Serologically defined breast cancer antigen NY-BR-84, transcript variant 4 (LOC477212), mRNA Length = 1180 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 522 aacaaggtggctggaaacttccactttgctcccgggaagagcttccagcagtc 574
>ref|XM_859489.1| PREDICTED: Canis familiaris similar to Serologically defined breast cancer antigen NY-BR-84, transcript variant 3 (LOC477212), mRNA Length = 1218 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 560 aacaaggtggctggaaacttccactttgctcccgggaagagcttccagcagtc 612
>ref|XM_846786.1| PREDICTED: Canis familiaris similar to Serologically defined breast cancer antigen NY-BR-84, transcript variant 2 (LOC477212), mRNA Length = 1194 Score = 65.9 bits (33), Expect = 4e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| ||||| || |||||||||||||| ||||| |||||||||||||| Sbjct: 521 aacaaggtggctggaaacttccactttgctcccgggaagagcttccagcagtc 573
>ref|XM_682440.1| PREDICTED: Danio rerio similar to Serologically defined breast cancer antigen 84, transcript variant 1 (LOC573369), mRNA Length = 1976 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 |||||||||||||||| | || ||||| || || |||||||| ||||| || || || | Sbjct: 660 tttatggctttctggaggtcaataaggtggcaggaaatttccattttgcccctggaaaga 719 Query: 815 gcttccagcagtcaaatgttcatgttcacgatctgc 850 | ||||||||||| ||||||||||||| ||||||| Sbjct: 720 gtttccagcagtctcatgttcatgttcatgatctgc 755
>ref|NM_201015.1| Danio rerio ERGIC and golgi 3 (ergic3), mRNA gb|BC044474.1| Danio rerio ERGIC and golgi 3, mRNA (cDNA clone MGC:55762 IMAGE:3816665), complete cds Length = 1989 Score = 63.9 bits (32), Expect = 2e-06 Identities = 80/96 (83%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 |||||||||||||||| | || ||||| || || |||||||| ||||| || || || | Sbjct: 650 tttatggctttctggaggtcaataaggtggcaggaaatttccattttgcccctggaaaga 709 Query: 815 gcttccagcagtcaaatgttcatgttcacgatctgc 850 | ||||||||||| ||||||||||||| ||||||| Sbjct: 710 gtttccagcagtctcatgttcatgttcatgatctgc 745
>gb|AY108562.1| Zea mays PCO098370 mRNA sequence Length = 835 Score = 63.9 bits (32), Expect = 2e-06 Identities = 32/32 (100%) Strand = Plus / Plus Query: 177 cgcgtaccccaaggtgaacgaggacttctaca 208 |||||||||||||||||||||||||||||||| Sbjct: 267 cgcgtaccccaaggtgaacgaggacttctaca 298
>ref|NM_102070.2| Arabidopsis thaliana unknown protein (AT1G22200) mRNA, complete cds Length = 1576 Score = 60.0 bits (30), Expect = 3e-05 Identities = 207/266 (77%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctca 585 ||||||||||||||| | |||||||||||| | ||||||||||| || || ||||| || Sbjct: 542 gaaaaacctttacaaaaacatggtggaaggttggaacacaatgaaacatactgtggttcc 601 Query: 586 tgttatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaa 645 |||| ||| ||| ||| || ||| |||||||| || ||||| || || || ||| Sbjct: 602 tgttttggagcagaagcgtcagatgatgcttgttgtaattcatgtgaggaagttcgcgaa 661 Query: 646 gcatacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagc 705 || ||| ||||||||||||||| | | || | || || || ||||| ||||| ||||| Sbjct: 662 gcttaccgaaagaaaggttgggccctctcggaccctgaatcaatcgaccagtgtaaaaga 721 Query: 706 gagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggcttt 765 || ||||| | |||| | |||| ||||||||||||||||| || || || | || || Sbjct: 722 gaaggctttgtgcaaaaggtaaaagatgaagaaggtgaaggttgtaatgttcacggtttc 781 Query: 766 ctggaaattaacaaggttgctgggaa 791 ||||| ||||||| ||||||||||| Sbjct: 782 ttggaagttaacaaagttgctgggaa 807 Score = 50.1 bits (25), Expect = 0.027 Identities = 82/101 (81%) Strand = Plus / Plus Query: 322 gttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttccagccctt 381 |||||||| ||||||||||| || || || || ||||||||| | || || || || ||| Sbjct: 338 gttgatacatcaagaggagagaagctacggattaattttgatgttacattccctgcgctt 397 Query: 382 cagtgttctattattagtgttgatgtgatggacatcagtgg 422 || ||||| ||||||||| ||||| ||||| |||||||| Sbjct: 398 caatgttcgattattagtcttgattccatggatatcagtgg 438
>ref|NM_001036000.1| Arabidopsis thaliana unknown protein (AT1G22200) mRNA, complete cds Length = 1617 Score = 60.0 bits (30), Expect = 3e-05 Identities = 207/266 (77%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctca 585 ||||||||||||||| | |||||||||||| | ||||||||||| || || ||||| || Sbjct: 571 gaaaaacctttacaaaaacatggtggaaggttggaacacaatgaaacatactgtggttcc 630 Query: 586 tgttatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaa 645 |||| ||| ||| ||| || ||| |||||||| || ||||| || || || ||| Sbjct: 631 tgttttggagcagaagcgtcagatgatgcttgttgtaattcatgtgaggaagttcgcgaa 690 Query: 646 gcatacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagc 705 || ||| ||||||||||||||| | | || | || || || ||||| ||||| ||||| Sbjct: 691 gcttaccgaaagaaaggttgggccctctcggaccctgaatcaatcgaccagtgtaaaaga 750 Query: 706 gagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggcttt 765 || ||||| | |||| | |||| ||||||||||||||||| || || || | || || Sbjct: 751 gaaggctttgtgcaaaaggtaaaagatgaagaaggtgaaggttgtaatgttcacggtttc 810 Query: 766 ctggaaattaacaaggttgctgggaa 791 ||||| ||||||| ||||||||||| Sbjct: 811 ttggaagttaacaaagttgctgggaa 836 Score = 50.1 bits (25), Expect = 0.027 Identities = 82/101 (81%) Strand = Plus / Plus Query: 322 gttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttccagccctt 381 |||||||| ||||||||||| || || || || ||||||||| | || || || || ||| Sbjct: 367 gttgatacatcaagaggagagaagctacggattaattttgatgttacattccctgcgctt 426 Query: 382 cagtgttctattattagtgttgatgtgatggacatcagtgg 422 || ||||| ||||||||| ||||| ||||| |||||||| Sbjct: 427 caatgttcgattattagtcttgattccatggatatcagtgg 467
>gb|AY113908.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds Length = 1192 Score = 60.0 bits (30), Expect = 3e-05 Identities = 207/266 (77%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctca 585 ||||||||||||||| | |||||||||||| | ||||||||||| || || ||||| || Sbjct: 385 gaaaaacctttacaaaaacatggtggaaggttggaacacaatgaaacatactgtggttcc 444 Query: 586 tgttatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaa 645 |||| ||| ||| ||| || ||| |||||||| || ||||| || || || ||| Sbjct: 445 tgttttggagcagaagcgtcagatgatgcttgttgtaattcatgtgaggaagttcgcgaa 504 Query: 646 gcatacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagc 705 || ||| ||||||||||||||| | | || | || || || ||||| ||||| ||||| Sbjct: 505 gcttaccgaaagaaaggttgggccctctcggaccctgaatcaatcgaccagtgtaaaaga 564 Query: 706 gagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggcttt 765 || ||||| | |||| | |||| ||||||||||||||||| || || || | || || Sbjct: 565 gaaggctttgtgcaaaaggtaaaagatgaagaaggtgaaggttgtaatgttcacggtttc 624 Query: 766 ctggaaattaacaaggttgctgggaa 791 ||||| ||||||| ||||||||||| Sbjct: 625 ttggaagttaacaaagttgctgggaa 650 Score = 50.1 bits (25), Expect = 0.027 Identities = 82/101 (81%) Strand = Plus / Plus Query: 322 gttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttccagccctt 381 |||||||| ||||||||||| || || || || ||||||||| | || || || || ||| Sbjct: 181 gttgatacatcaagaggagagaagctacggattaattttgatgttacattccctgcgctt 240 Query: 382 cagtgttctattattagtgttgatgtgatggacatcagtgg 422 || ||||| ||||||||| ||||| ||||| |||||||| Sbjct: 241 caatgttcgattattagtcttgattccatggatatcagtgg 281
>gb|AF370338.1| Arabidopsis thaliana unknown protein (At1g22200) mRNA, complete cds Length = 1522 Score = 60.0 bits (30), Expect = 3e-05 Identities = 207/266 (77%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctca 585 ||||||||||||||| | |||||||||||| | ||||||||||| || || ||||| || Sbjct: 542 gaaaaacctttacaaaaacatggtggaaggttggaacacaatgaaacatactgtggttcc 601 Query: 586 tgttatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaa 645 |||| ||| ||| ||| || ||| |||||||| || ||||| || || || ||| Sbjct: 602 tgttttggagcagaagcgtcagatgatgcttgttgtaattcatgtgaggaagttcgcgaa 661 Query: 646 gcatacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagc 705 || ||| ||||||||||||||| | | || | || || || ||||| ||||| ||||| Sbjct: 662 gcttaccgaaagaaaggttgggccctctcggaccctgaatcaatcgaccagtgtaaaaga 721 Query: 706 gagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggcttt 765 || ||||| | |||| | |||| ||||||||||||||||| || || || | || || Sbjct: 722 gaaggctttgtgcaaaaggtaaaagatgaagaaggtgaaggttgtaatgttcacggtttc 781 Query: 766 ctggaaattaacaaggttgctgggaa 791 ||||| ||||||| ||||||||||| Sbjct: 782 ttggaagttaacaaagttgctgggaa 807 Score = 50.1 bits (25), Expect = 0.027 Identities = 82/101 (81%) Strand = Plus / Plus Query: 322 gttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttccagccctt 381 |||||||| ||||||||||| || || || || ||||||||| | || || || || ||| Sbjct: 338 gttgatacatcaagaggagagaagctacggattaattttgatgttacattccctgcgctt 397 Query: 382 cagtgttctattattagtgttgatgtgatggacatcagtgg 422 || ||||| ||||||||| ||||| ||||| |||||||| Sbjct: 398 caatgttcgattattagtcttgattccatggatatcagtgg 438
>gb|AY085626.1| Arabidopsis thaliana clone 16380 mRNA, complete sequence Length = 1540 Score = 60.0 bits (30), Expect = 3e-05 Identities = 207/266 (77%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatgagacctattgtggctca 585 ||||||||||||||| | |||||||||||| | ||||||||||| || || ||||| || Sbjct: 525 gaaaaacctttacaaaaacatggtggaaggttggaacacaatgaaacatactgtggttcc 584 Query: 586 tgttatggtgcacaagaatctcctgaacaatgttgtaactcgtgtgaagatgtccgtgaa 645 |||| ||| ||| ||| || ||| |||||||| || ||||| || || || ||| Sbjct: 585 tgttttggagcagaagcgtcagatgatgcttgttgtaattcatgtgaggaagttcgcgaa 644 Query: 646 gcatacagaaagaaaggttggggcgtatcaaatccagattcgatcgatcagtgcaaaagc 705 || ||| ||||||||||||||| | | || | || || || ||||| ||||| ||||| Sbjct: 645 gcttaccgaaagaaaggttgggccctctcggaccctgaatcaatcgaccagtgtaaaaga 704 Query: 706 gagggcttcctacaaacgataaaggatgaagaaggtgaaggatgcaacatttatggcttt 765 || ||||| | |||| | |||| ||||||||||||||||| || || || | || || Sbjct: 705 gaaggctttgtgcaaaaggtaaaagatgaagaaggtgaaggttgtaatgttcacggtttc 764 Query: 766 ctggaaattaacaaggttgctgggaa 791 ||||| ||||||| ||||||||||| Sbjct: 765 ttggaagttaacaaagttgctgggaa 790 Score = 50.1 bits (25), Expect = 0.027 Identities = 82/101 (81%) Strand = Plus / Plus Query: 322 gttgatacctcaagaggagaaaaacttcgcataaattttgatatcacctttccagccctt 381 |||||||| ||||||||||| || || || || ||||||||| | || || || || ||| Sbjct: 321 gttgatacatcaagaggagagaagctacggattaattttgatgttacattccctgcgctt 380 Query: 382 cagtgttctattattagtgttgatgtgatggacatcagtgg 422 || ||||| ||||||||| ||||| ||||| |||||||| Sbjct: 381 caatgttcgattattagtcttgattccatggatatcagtgg 421
>dbj|AK239562.1| Sus scrofa mRNA, clone:THY010113A08, expressed in thymus Length = 1333 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| |||||||| |||||||| || || ||||| |||||||||||||| Sbjct: 642 aacaaggtggctgggaacttccacttcgcccccgggaagagcttccagcagtc 694
>gb|BT025364.1| Bos taurus ERGIC and golgi 3 (ERGIC3), mRNA, incomplete 5' cds Length = 2129 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || |||||||||||||| ||||| |||||||||||||| Sbjct: 613 aacaaggtggccggaaacttccactttgctcccgggaagagcttccagcagtc 665
>gb|AC118414.9| Rattus norvegicus 3 BAC CH230-223K21 (Children's Hospital Oakland Research Institute) complete sequence Length = 217330 Score = 58.0 bits (29), Expect = 1e-04 Identities = 44/49 (89%) Strand = Plus / Plus Query: 779 aggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||| |||||||| ||||||||||| || ||||| |||||||||||||| Sbjct: 36712 aggtggctgggaacttccactttgcccctgggaagagcttccagcagtc 36760
>emb|BX935829.1| Gallus gallus finished cDNA, clone ChEST165e2 Length = 1870 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 778 aaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgttcat 837 ||||| ||||| ||||| |||||||| ||||| |||||||||||||| || |||| ||| Sbjct: 553 aaggtagctggaaattttcactttgcaccaggaaaaagcttccagcaatctcatgtacat 612 Query: 838 gttca 842 ||||| Sbjct: 613 gttca 617
>emb|BX930991.1| Gallus gallus finished cDNA, clone ChEST67n24 Length = 1951 Score = 58.0 bits (29), Expect = 1e-04 Identities = 56/65 (86%) Strand = Plus / Plus Query: 778 aaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgttcat 837 ||||| ||||| ||||| |||||||| ||||| |||||||||||||| || |||| ||| Sbjct: 637 aaggtagctggaaattttcactttgcaccaggaaaaagcttccagcaatctcatgtacat 696 Query: 838 gttca 842 ||||| Sbjct: 697 gttca 701
>gb|BT020688.1| Bos taurus serologically defined breast cancer antigen 84 (SDBCAG84), mRNA, complete cds Length = 1322 Score = 58.0 bits (29), Expect = 1e-04 Identities = 47/53 (88%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || |||||||||||||| ||||| |||||||||||||| Sbjct: 638 aacaaggtggccggaaacttccactttgctcccgggaagagcttccagcagtc 690
>ref|NM_025516.2| Mus musculus ERGIC and golgi 3 (Ergic3), mRNA gb|BC043720.1| Mus musculus ERGIC and golgi 3, mRNA (cDNA clone MGC:49447 IMAGE:5375947), complete cds Length = 1426 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgtt 834 |||||||| ||||| || ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 663 aacaaggtggctggaaacttccactttgcccctgggaagagcttccaacagtctcatgtg 722 Query: 835 catgttca 842 |||||||| Sbjct: 723 catgttca 730
>dbj|AK009350.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched library, clone:2310015B14 product:serologically defined breast cancer antigen 84, full insert sequence Length = 1296 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgtt 834 |||||||| ||||| || ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 639 aacaaggtggctggaaacttccactttgcccctgggaagagcttccaacagtctcatgtg 698 Query: 835 catgttca 842 |||||||| Sbjct: 699 catgttca 706
>dbj|AK050285.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730034C09 product:serologically defined breast cancer antigen 84, full insert sequence Length = 1310 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgtt 834 |||||||| ||||| || ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 653 aacaaggtggctggaaacttccactttgcccctgggaagagcttccaacagtctcatgtg 712 Query: 835 catgttca 842 |||||||| Sbjct: 713 catgttca 720
>dbj|AK190333.1| Mus musculus cDNA, clone:Y1G0102G22, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000006035, based on BLAT search Length = 391 Score = 56.0 bits (28), Expect = 4e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgtt 834 |||||||| ||||| || ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 214 aacaaggtggctggaaacttccactttgcccctgggaagagcttccaacagtctcatgtg 273 Query: 835 catgttca 842 |||||||| Sbjct: 274 catgttca 281
>gb|AC073942.2|F16L1 Sequence of BAC F16L1 from Arabidopsis thaliana chromosome 1, complete sequence Length = 36030 Score = 56.0 bits (28), Expect = 4e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 526 gaaaaacctttacaacatcatggtggaaggcttgaacacaatga 569 ||||||||||||||| | |||||||||||| | ||||||||||| Sbjct: 20574 gaaaaacctttacaaaaacatggtggaaggttggaacacaatga 20617
>gb|AY112254.1| Zea mays CL9004_1 mRNA sequence Length = 649 Score = 56.0 bits (28), Expect = 4e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 1193 tatgcgctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctacc 1252 |||| ||||||||||||||| | ||||| ||| |||| ||||||||||| || || |||| Sbjct: 292 tatgtgctattgttggaggtatcttcacggttgctggcatcatagattctttcgtgtacc 233 Query: 1253 atgg 1256 |||| Sbjct: 232 atgg 229 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1036 attctctccaatcagttttctgtgacaga 1064 |||| ||| |||||||||||||||||||| Sbjct: 446 attcactcaaatcagttttctgtgacaga 418
>ref|XM_417322.2| PREDICTED: Gallus gallus ERGIC and golgi 3 (ERGIC3), mRNA Length = 2200 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 778 aaggttgctgggaatttccactttgctccagggaaaagcttccagca 824 ||||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 544 aaggtagctggaaattttcactttgcaccaggaaaaagcttccagca 590
>ref|XM_001186089.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC587222 (LOC587222), mRNA Length = 1164 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttcca 821 ||||||||||| || |||||||| ||||| |||||||| |||||||| Sbjct: 628 aacaaggttgcaggaaatttccattttgcaccagggaagagcttcca 674
>ref|XM_786964.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC587222 (LOC587222), mRNA Length = 1164 Score = 54.0 bits (27), Expect = 0.002 Identities = 42/47 (89%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttcca 821 ||||||||||| || |||||||| ||||| |||||||| |||||||| Sbjct: 628 aacaaggttgcaggaaatttccattttgcaccagggaagagcttcca 674
>gb|AC173211.3| Gallus gallus BAC clone CH261-2F13 from chromosome ul, complete sequence Length = 204791 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Plus Query: 779 aggttgctgggaatttccactttgctccagggaaaagcttccagca 824 |||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 20023 aggtagctggaaattttcactttgcaccaggaaaaagcttccagca 20068
>gb|AC161469.3| Gallus gallus BAC clone CH261-69M17 from chromosome ul, complete sequence Length = 186443 Score = 52.0 bits (26), Expect = 0.007 Identities = 41/46 (89%) Strand = Plus / Minus Query: 779 aggttgctgggaatttccactttgctccagggaaaagcttccagca 824 |||| ||||| ||||| |||||||| ||||| |||||||||||||| Sbjct: 88828 aggtagctggaaattttcactttgcaccaggaaaaagcttccagca 88783
>gb|BT026271.1| Bos taurus ERGIC and golgi 3 (ERGIC3), mRNA, complete cds Length = 1315 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 631 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 683
>gb|BT025349.1| Bos taurus ERGIC and golgi 3 (ERGIC3), mRNA, incomplete 5' cds Length = 1287 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 603 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 655
>ref|NM_001033105.1| Danio rerio zgc:113959 (zgc:113959), mRNA gb|BC100125.1| Danio rerio zgc:113959, mRNA (cDNA clone MGC:113959 IMAGE:5604959), complete cds Length = 2011 Score = 50.1 bits (25), Expect = 0.027 Identities = 70/85 (82%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 |||||||||||||||| | || ||||| || || |||||||| ||||| || || || | Sbjct: 650 tttatggctttctggaggtcaataaggtggcaggaaatttccattttgcccctggaaaga 709 Query: 815 gcttccagcagtcaaatgttcatgt 839 | ||||||||||| |||||||||| Sbjct: 710 gtttccagcagtctcatgttcatgt 734
>ref|NM_001034353.1| Bos taurus serologically defined breast cancer antigen 84 isoform b (SDBCAG84), mRNA gb|BC102326.1| Bos taurus serologically defined breast cancer antigen 84 isoform b, mRNA (cDNA clone MGC:127511 IMAGE:7951207), complete cds Length = 1024 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 640 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 692
>gb|BC057130.1| Mus musculus ERGIC and golgi 3, mRNA (cDNA clone MGC:61258 IMAGE:6819420), complete cds Length = 1409 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| ||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct: 657 aacaaggtggctggaaacttccactttgcccctgggaagagcttccaacagtc 709
>ref|XM_703705.1| PREDICTED: Danio rerio similar to Serologically defined breast cancer antigen 84, transcript variant 3 (LOC573369), mRNA Length = 1991 Score = 50.1 bits (25), Expect = 0.027 Identities = 70/85 (82%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 |||||||||||||||| | || ||||| || || |||||||| ||||| || || || | Sbjct: 660 tttatggctttctggaggtcaataaggtggcaggaaatttccattttgcccctggaaaga 719 Query: 815 gcttccagcagtcaaatgttcatgt 839 | ||||||||||| |||||||||| Sbjct: 720 gtttccagcagtctcatgttcatgt 744
>gb|BT021881.1| Bos taurus serologically defined breast cancer antigen 84 (SDBCAG84), mRNA, complete cds Length = 2097 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 662 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 714
>gb|BT021799.1| Bos taurus serologically defined breast cancer antigen 84 (SDBCAG84), mRNA, complete cds Length = 1303 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 621 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 673
>gb|BT020629.1| Bos taurus serologically defined breast cancer antigen 84 (SDBCAG84), mRNA, complete cds Length = 1308 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 624 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 676
>gb|BT020628.1| Bos taurus serologically defined breast cancer antigen 84 (SDBCAG84), mRNA, complete cds Length = 1311 Score = 50.1 bits (25), Expect = 0.027 Identities = 46/53 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||||||| || || || ||||||||||| || ||||| |||||||||||||| Sbjct: 627 aacaaggtggccggaaacttccactttgcccccgggaagagcttccagcagtc 679
>dbj|AK013942.1| Mus musculus 13 days embryo head cDNA, RIKEN full-length enriched library, clone:3110001F04 product:serologically defined breast cancer antigen 84, full insert sequence Length = 1295 Score = 48.1 bits (24), Expect = 0.11 Identities = 57/68 (83%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagcagtcaaatgtt 834 ||||| || ||||| || ||||||||||| || ||||| |||||||| ||||| |||| Sbjct: 638 aacaaagtggctggaaacttccactttgcccctgggaagagcttccaacagtctcatgtg 697 Query: 835 catgttca 842 |||||||| Sbjct: 698 catgttca 705
>ref|XM_703704.1| PREDICTED: Danio rerio similar to Serologically defined breast cancer antigen 84, transcript variant 2 (LOC573369), mRNA Length = 2033 Score = 48.1 bits (24), Expect = 0.11 Identities = 69/84 (82%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaacaaggttgctgggaatttccactttgctccagggaaaa 814 |||||||||||||||| | || ||||| || || |||||||| ||||| || || || | Sbjct: 660 tttatggctttctggaggtcaataaggtggcaggaaatttccattttgcccctggaaaga 719 Query: 815 gcttccagcagtcaaatgttcatg 838 | ||||||||||| ||||||||| Sbjct: 720 gtttccagcagtctcatgttcatg 743
>emb|CR382379.6| Zebrafish DNA sequence from clone DKEY-175N5 in linkage group 7, complete sequence Length = 159548 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaaca 778 |||||||||||||||||||||||| Sbjct: 45984 tttatggctttctggaaattaaca 46007
>emb|BX927082.9| Zebrafish DNA sequence from clone DKEY-182O15 in linkage group 13, complete sequence Length = 157140 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Plus Query: 755 tttatggctttctggaaattaaca 778 |||||||||||||||||||||||| Sbjct: 124583 tttatggctttctggaaattaaca 124606
>gb|AC016689.4| Homo sapiens BAC clone RP11-81H20 from 2, complete sequence Length = 134841 Score = 48.1 bits (24), Expect = 0.11 Identities = 27/28 (96%) Strand = Plus / Plus Query: 885 taagataaataaattgagttttggagaa 912 |||||||||||||||||| ||||||||| Sbjct: 108866 taagataaataaattgaggtttggagaa 108893
>gb|AC189863.1| Pan troglodytes chromosome 20 clone CH251-438B6, complete sequence Length = 168070 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 80938 ttccactttgcccctgggaagagcttccagcagtc 80972
>ref|XM_001098576.1| PREDICTED: Macaca mulatta serologically defined breast cancer antigen 84, transcript variant 1 (ERGIC3), mRNA Length = 1297 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 658 ttccactttgcccctgggaagagcttccagcagtc 692
>ref|XM_001098982.1| PREDICTED: Macaca mulatta serologically defined breast cancer antigen 84, transcript variant 3 (ERGIC3), mRNA Length = 1768 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 1125 ttccactttgcccctgggaagagcttccagcagtc 1159
>ref|XM_001098885.1| PREDICTED: Macaca mulatta serologically defined breast cancer antigen 84, transcript variant 2 (ERGIC3), mRNA Length = 1371 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 717 ttccactttgcccctgggaagagcttccagcagtc 751
>gb|AC161626.6| Pan troglodytes BAC clone CH251-114C24 from chromosome unknown, complete sequence Length = 167136 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 7650 ttccactttgcccctgggaagagcttccagcagtc 7684
>gb|AC166357.3| Mus musculus BAC clone RP23-360N1 from chromosome 7, complete sequence Length = 220916 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 caaggttgctgggaatttccact 799 ||||||||||||||||||||||| Sbjct: 17975 caaggttgctgggaatttccact 17953
>gb|AC165142.3| Mus musculus BAC clone RP24-484I1 from chromosome 7, complete sequence Length = 165049 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 777 caaggttgctgggaatttccact 799 ||||||||||||||||||||||| Sbjct: 108134 caaggttgctgggaatttccact 108112
>gb|AC006642.1| Caenorhabditis elegans cosmid F49H12, complete sequence Length = 38260 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1114 tttttcttttatgacctttcacc 1136 ||||||||||||||||||||||| Sbjct: 29778 tttttcttttatgacctttcacc 29756
>dbj|AK074550.1| Homo sapiens cDNA FLJ90069 fis, clone HEMBA1003945, highly similar to Serologically defined breast cancer antigen 84 Length = 1313 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 657 ttccactttgcccctgggaagagcttccagcagtc 691
>gb|AF308298.1| Homo sapiens serologically defined breast cancer antigen NY-BR-84 mRNA, partial cds Length = 1636 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 669 ttccactttgcccctgggaagagcttccagcagtc 703
>gb|BC014014.2| Homo sapiens ERGIC and golgi 3, mRNA (cDNA clone MGC:19896 IMAGE:3954269), complete cds Length = 1328 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 662 ttccactttgcccctgggaagagcttccagcagtc 696
>gb|BC009765.1| Homo sapiens ERGIC and golgi 3, mRNA (cDNA clone MGC:13325 IMAGE:4283844), complete cds Length = 1342 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 663 ttccactttgcccctgggaagagcttccagcagtc 697
>dbj|AB168326.1| Macaca fascicularis testis cDNA clone: QtsA-11239, similar to human serologically defined breast cancer antigen 84(SDBCAG84), transcript variant 2, mRNA, RefSeq: NM_015966.2 Length = 1781 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 1121 ttccactttgcccctgggaagagcttccagcagtc 1155
>ref|NM_015966.2| Homo sapiens ERGIC and golgi 3 (ERGIC3), transcript variant 2, mRNA Length = 1368 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 709 ttccactttgcccctgggaagagcttccagcagtc 743
>ref|NM_198398.1| Homo sapiens ERGIC and golgi 3 (ERGIC3), transcript variant 1, mRNA Length = 1383 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 709 ttccactttgcccctgggaagagcttccagcagtc 743
>emb|AL121586.31|HSDJ477O4 Human DNA sequence from clone RP3-477O4 on chromosome 20 Contains a novel gene, the GDF5 gene for growth differentiation factor 5, the CEP2 gene for centrosomal protein 2, two novel genes, a pseudogene similar to sialyltransferase proteins, the C20orf173 gene for chromosome 20 open reading frame 173, the SDBCAG84 gene for serologically defined breast cancer antigen 84, the RPL36P4 locus for ribosomal protein L36 pseudogene 4, the 3' end of the FER1L4 gene for fer-1-like 4 (C. elegans) and three CpG islands, complete sequence Length = 151903 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 127365 ttccactttgcccctgggaagagcttccagcagtc 127399
>gb|AF116614.1|AF116614 Homo sapiens PRO0989 mRNA, complete cds Length = 1523 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 816 ttccactttgcccctgggaagagcttccagcagtc 850
>emb|CR859789.1| Pongo pygmaeus mRNA; cDNA DKFZp468N069 (from clone DKFZp468N069) Length = 1381 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 687 ttccactttgcccctgggaagagcttccagcagtc 721
>emb|CR623909.1| full-length cDNA clone CS0DI016YJ16 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1268 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 655 ttccactttgcccctgggaagagcttccagcagtc 689
>emb|CR622738.1| full-length cDNA clone CS0DI071YH19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1298 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 668 ttccactttgcccctgggaagagcttccagcagtc 702
>emb|CR615343.1| full-length cDNA clone CS0DJ007YI23 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1278 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 655 ttccactttgcccctgggaagagcttccagcagtc 689
>emb|CR614105.1| full-length cDNA clone CS0DK007YC11 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1264 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 656 ttccactttgcccctgggaagagcttccagcagtc 690
>emb|CR613283.1| full-length cDNA clone CS0DK010YH10 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1183 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 559 ttccactttgcccctgggaagagcttccagcagtc 593
>emb|CR612111.1| full-length cDNA clone CS0DK012YJ23 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1308 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 662 ttccactttgcccctgggaagagcttccagcagtc 696
>emb|CR610449.1| full-length cDNA clone CS0DC001YM24 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 957 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 325 ttccactttgcccctgggaagagcttccagcagtc 359
>emb|CR607525.1| full-length cDNA clone CS0DI059YC17 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1234 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 641 ttccactttgcccctgggaagagcttccagcagtc 675
>emb|CR604308.1| full-length cDNA clone CS0DI087YM07 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1245 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 637 ttccactttgcccctgggaagagcttccagcagtc 671
>emb|CR602704.1| full-length cDNA clone CS0DI065YE12 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1285 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 656 ttccactttgcccctgggaagagcttccagcagtc 690
>emb|CR600670.1| full-length cDNA clone CS0DC013YC09 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1067 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 438 ttccactttgcccctgggaagagcttccagcagtc 472
>emb|CR599797.1| full-length cDNA clone CS0DI061YC22 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1217 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 632 ttccactttgcccctgggaagagcttccagcagtc 666
>emb|CR592617.1| full-length cDNA clone CS0DJ001YG10 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1248 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 666 ttccactttgcccctgggaagagcttccagcagtc 700
>emb|CR591725.1| full-length cDNA clone CS0DD008YE10 of Neuroblastoma Cot 50-normalized of Homo sapiens (human) Length = 1294 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 675 ttccactttgcccctgggaagagcttccagcagtc 709
>gb|AF077030.1| Homo sapiens hypothetical 43.2 Kd protein mRNA, complete cds Length = 1337 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 667 ttccactttgcccctgggaagagcttccagcagtc 701
>gb|AF151812.1|AF151812 Homo sapiens CGI-54 protein mRNA, complete cds Length = 1315 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 667 ttccactttgcccctgggaagagcttccagcagtc 701
>gb|AC160565.2| Pan troglodytes BAC clone CH251-539H3 from chromosome unknown, complete sequence Length = 166497 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 108437 ttccactttgcccctgggaagagcttccagcagtc 108471
>gb|AF091085.1|AF091085 Homo sapiens clone 638 unknown mRNA, complete sequence Length = 855 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 320 ttccactttgcccctgggaagagcttccagcagtc 354
>emb|AL161963.1|HSM802540 Homo sapiens mRNA; cDNA DKFZp547A2190 (from clone DKFZp547A2190) Length = 1023 Score = 46.1 bits (23), Expect = 0.42 Identities = 32/35 (91%) Strand = Plus / Plus Query: 793 ttccactttgctccagggaaaagcttccagcagtc 827 ||||||||||| || ||||| |||||||||||||| Sbjct: 350 ttccactttgcccctgggaagagcttccagcagtc 384
>emb|AL365329.7| Mouse DNA sequence from clone RP23-181N5 on chromosome 1, complete sequence Length = 61423 Score = 46.1 bits (23), Expect = 0.42 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1624 ttgtaaatctgtgtaagagtgat 1646 ||||||||||||||||||||||| Sbjct: 58286 ttgtaaatctgtgtaagagtgat 58308
>ref|XM_001233107.1| PREDICTED: Gallus gallus hypothetical protein LOC769801 (LOC769801), mRNA Length = 654 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 105 gtcgtcgcggggcagcgccgcc 126 |||||||||||||||||||||| Sbjct: 572 gtcgtcgcggggcagcgccgcc 593
>ref|XM_415614.2| PREDICTED: Gallus gallus SEC14-like 1 (S. cerevisiae) (SEC14L1), mRNA Length = 5000 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 gtcgtcgcggggcagcgccgcc 126 |||||||||||||||||||||| Sbjct: 33 gtcgtcgcggggcagcgccgcc 12
>gb|BC080394.1| Xenopus laevis MGC83277 protein, mRNA (cDNA clone MGC:83277 IMAGE:6862802), complete cds Length = 4277 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 775 aacaaggttgctgggaatttccactttgctccagggaaaagcttccagca 824 |||||||| || ||||| || |||||||| || || |||||||||||||| Sbjct: 687 aacaaggtggccgggaactttcactttgcccctggaaaaagcttccagca 736
>dbj|AK220943.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-53-D03 Length = 367 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcac 1220 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 41 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcac 90
>ref|XM_800435.1| Trypanosoma cruzi strain CL Brener tryptophanyl-tRNA synthetase (Tc00.1047053510647.30) partial mRNA Length = 1170 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 458 agcagcgaatcgatgcacatgg 479 |||||||||||||||||||||| Sbjct: 244 agcagcgaatcgatgcacatgg 265
>emb|CR762435.19| Zebrafish DNA sequence from clone CH211-238C15 in linkage group 18, complete sequence Length = 157544 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 240 cgcctcctccttcatcatgctc 261 |||||||||||||||||||||| Sbjct: 63071 cgcctcctccttcatcatgctc 63050
>emb|BX950250.1| Gallus gallus finished cDNA, clone ChEST708k2 Length = 957 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Minus Query: 105 gtcgtcgcggggcagcgccgcc 126 |||||||||||||||||||||| Sbjct: 27 gtcgtcgcggggcagcgccgcc 6
>emb|BX818235.1|CNS0AB0A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZB02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 562 Score = 44.1 bits (22), Expect = 1.6 Identities = 43/50 (86%) Strand = Plus / Plus Query: 1171 ttcttacacttcttaactaatgtatgcgctattgttggaggtgtgttcac 1220 ||||| |||||||| || ||||| ||||| || ||||||||||| ||||| Sbjct: 278 ttcttgcacttcttgacgaatgtttgcgccatagttggaggtgtcttcac 327
>emb|Z72503.1|CEC26C6 Caenorhabditis elegans Cosmid C26C6, complete sequence Length = 42472 Score = 44.1 bits (22), Expect = 1.6 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1036 attctctccaatcagttttctg 1057 |||||||||||||||||||||| Sbjct: 13103 attctctccaatcagttttctg 13124
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 cggcggcgccatcacgctcgc 242 ||||||||||||||||||||| Sbjct: 344054 cggcggcgccatcacgctcgc 344034
>emb|CT829857.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI245B03, full insert sequence Length = 2679 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 914 cgtccgtccgtccccaacgcc 894
>gb|AC165172.2| Zea mays clone CH201-171E16, complete sequence Length = 180971 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tgctcctcctcttcgtctccg 277 ||||||||||||||||||||| Sbjct: 142640 tgctcctcctcttcgtctccg 142660
>ref|XM_499863.1| Yarrowia lipolytica CLIB122, YALI0A08107g predicted mRNA Length = 1200 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 251 tcatcatgctcctcctcttcgtctccgagctcc 283 |||||||||||| |||| |||||||| |||||| Sbjct: 1187 tcatcatgctccacctcgtcgtctccaagctcc 1155
>gb|AF130343.2| Homo sapiens chromosome 8 multiple clones map q23.3, complete sequence Length = 292718 Score = 42.1 bits (21), Expect = 6.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 1556 caatttttgtacacttaagtccacaagga 1584 |||||||||||||||||| |||| ||||| Sbjct: 192081 caatttttgtacacttaactccataagga 192053
>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence Length = 202351 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1525 gctcaggcaaatggaacattt 1545 ||||||||||||||||||||| Sbjct: 106126 gctcaggcaaatggaacattt 106146
>gb|AC113081.8| Mus musculus chromosome 9, clone RP23-291B23, complete sequence Length = 217420 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 792 tttccactttgctccagggaa 812 ||||||||||||||||||||| Sbjct: 72151 tttccactttgctccagggaa 72171
>dbj|AB238228.1| Xenopus laevis p54nrb mRNA for 54 kD nuclear RNA-binding protein, complete cds Length = 2140 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1575 tccacaaggacaaaggttttg 1595 ||||||||||||||||||||| Sbjct: 436 tccacaaggacaaaggttttg 456
>gb|AC007637.9| Homo sapiens 12q24 BAC RCPI11-443D10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 175870 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1603 aaactgcaagtttttgtatttttgt 1627 ||||||||||||||| ||||||||| Sbjct: 116567 aaactgcaagtttttttatttttgt 116591
>ref|XM_761411.1| Theileria parva strain Muguga chromosome 1 calcium-dependent protein kinase (TP01_0983) partial mRNA Length = 1745 Score = 42.1 bits (21), Expect = 6.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1607 tgcaagtttttgtatttttgtaaat 1631 ||||||||||||| ||||||||||| Sbjct: 1196 tgcaagtttttgtgtttttgtaaat 1172
>gb|AC067717.19| Homo sapiens 3 BAC RP11-484E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 226233 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1610 aagtttttgtatttttgtaaa 1630 ||||||||||||||||||||| Sbjct: 108425 aagtttttgtatttttgtaaa 108405
>emb|AJ012166.1|CFA012166 Canis familiaris TCTA gene, AMT gene, NICN1 gene, DAG1 gene and BSN gene (partial) Length = 162073 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 551 gaaggcttgaacacaatgaga 571 ||||||||||||||||||||| Sbjct: 9588 gaaggcttgaacacaatgaga 9608
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 26947132 cgtccgtccgtccccaacgcc 26947152
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 13573290 cgtccgtccgtccccaacgcc 13573310 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 13577928 cgtccgtccgtccccaacgcc 13577908
>gb|AC022031.8| Homo sapiens chromosome 18, clone RP11-397A16, complete sequence Length = 202566 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 912 accctttcctggtgtgatcaa 932 ||||||||||||||||||||| Sbjct: 201839 accctttcctggtgtgatcaa 201859
>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a novel pseudogene, a farnesyl diphosphate synthase (farnesyl pyrophosphate synthetase, dimethylallyltranstransferase, geranyltranstransferase) (FDPS) pseudogene, a novel gene (LOC339476) and the 5' end of a solute carrier family 4 (anion exchanger) member 1 adaptor protein (SLC4A1AP) pseudogene, complete sequence Length = 190912 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 763 tttctggaaattaacaaggtt 783 ||||||||||||||||||||| Sbjct: 56662 tttctggaaattaacaaggtt 56682
>gb|AC027584.5| Homo sapiens chromosome 18, clone RP11-214L13, complete sequence Length = 144003 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 912 accctttcctggtgtgatcaa 932 ||||||||||||||||||||| Sbjct: 31960 accctttcctggtgtgatcaa 31980
>emb|AL121890.34|HS1116H23 Human DNA sequence from clone RP5-1116H23 on chromosome 20 Contains the 5' end of the SLC23A2 gene for solute carrier family 23 (nucleobase transporters) member 2, the 3' end of the C20orf30 gene fpr HSPC274 protein, an RPS21 (ribosomal protein S21) pseudogene and two CpG islands, complete sequence Length = 120426 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 723 gataaaggatgaagaaggtga 743 ||||||||||||||||||||| Sbjct: 26830 gataaaggatgaagaaggtga 26850
>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete sequence Length = 215626 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1639 agagtgatgtagactgtacaa 1659 ||||||||||||||||||||| Sbjct: 126387 agagtgatgtagactgtacaa 126367
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 127250 cgtccgtccgtccccaacgcc 127270 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 131888 cgtccgtccgtccccaacgcc 131868
>emb|BX510929.10| Zebrafish DNA sequence from clone CH211-261F9, complete sequence Length = 156428 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 241 gcctcctccttcatcatgctc 261 ||||||||||||||||||||| Sbjct: 81841 gcctcctccttcatcatgctc 81821
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 11610 cgtccgtccgtccccaacgcc 11630
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 95723 cgtccgtccgtccccaacgcc 95743
>gb|AC025613.14|AC025613 Homo sapiens chromosome 3 clone RP11-514J23, complete sequence Length = 172475 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1610 aagtttttgtatttttgtaaa 1630 ||||||||||||||||||||| Sbjct: 124309 aagtttttgtatttttgtaaa 124329
>gb|AC118980.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1263H11, complete sequence Length = 126827 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 106641 cgtccgtccgtccccaacgcc 106661 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 cgtccgtccgtccccaacgcc 66 ||||||||||||||||||||| Sbjct: 107431 cgtccgtccgtccccaacgcc 107411
>gb|AC151283.2| Mus musculus BAC clone RP23-463A14 from 17, complete sequence Length = 177340 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1639 agagtgatgtagactgtacaa 1659 ||||||||||||||||||||| Sbjct: 142861 agagtgatgtagactgtacaa 142881
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 aagcaagatgcagttggtggg 516 ||||||||||||||||||||| Sbjct: 318093 aagcaagatgcagttggtggg 318113
>gb|AY112405.1| Zea mays CL10251_1 mRNA sequence Length = 565 Score = 42.1 bits (21), Expect = 6.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 1198 gctattgttggaggtgtgttcactgtttctggaatcatagattcgtttgtctaccatggc 1257 ||||| || ||||||||||||||||| || || ||||| || |||||| | ||||| || Sbjct: 502 gctatagtgggaggtgtgttcactgtctcgggtatcatcgactcgtttatataccacgga 443 Query: 1258 cagagggca 1266 |||| |||| Sbjct: 442 cagaaggca 434
>gb|BC045128.1| Xenopus laevis 54 kD nuclear RNA-binding protein, mRNA (cDNA clone MGC:53535 IMAGE:5572815), complete cds Length = 2076 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1575 tccacaaggacaaaggttttg 1595 ||||||||||||||||||||| Sbjct: 359 tccacaaggacaaaggttttg 379
>gb|AY104471.1| Zea mays PCO114342 mRNA sequence Length = 1713 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 257 tgctcctcctcttcgtctccg 277 ||||||||||||||||||||| Sbjct: 36 tgctcctcctcttcgtctccg 56
>emb|AL133493.3|HS53I10 Homo sapiens chromosome 21sequence from BAC GS1-53I10, complete sequence Length = 223201 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 496 aagcaagatgcagttggtggg 516 ||||||||||||||||||||| Sbjct: 117858 aagcaagatgcagttggtggg 117878
>gb|AC135119.4| Mus musculus BAC clone RP24-535H19 from 14, complete sequence Length = 179520 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1627 taaatctgtgtaagagtgatg 1647 ||||||||||||||||||||| Sbjct: 53758 taaatctgtgtaagagtgatg 53778
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 42.1 bits (21), Expect = 6.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 251 tcatcatgctcctcctcttcgtctccgagctcc 283 |||||||||||| |||| |||||||| |||||| Sbjct: 787404 tcatcatgctccacctcgtcgtctccaagctcc 787372
>gb|AC084323.28| Mus musculus strain C57BL/6J chromosome 2 clone rp23-403l21, complete sequence Length = 188905 Score = 42.1 bits (21), Expect = 6.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 779 aggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||| ||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct: 143559 aggtggctggaaacttccactttgcccctgggaagagcttccaacagtc 143607
>emb|AL163639.3|CNS01RIL Human chromosome 14 DNA sequence BAC C-2291J13 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 117283 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1576 ccacaaggacaaaggttttgt 1596 ||||||||||||||||||||| Sbjct: 70300 ccacaaggacaaaggttttgt 70280
>emb|AL833786.8| Mouse DNA sequence from clone RP23-220D12 on chromosome 2, complete sequence Length = 194536 Score = 42.1 bits (21), Expect = 6.5 Identities = 42/49 (85%) Strand = Plus / Plus Query: 779 aggttgctgggaatttccactttgctccagggaaaagcttccagcagtc 827 |||| ||||| || ||||||||||| || ||||| |||||||| ||||| Sbjct: 62059 aggtggctggaaacttccactttgcccctgggaagagcttccaacagtc 62107
>gb|AC170761.3| Rhesus Macaque CHR5 BAC CH250-342J4 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 160607 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1212 tgtgttcactgtttctggaat 1232 ||||||||||||||||||||| Sbjct: 102637 tgtgttcactgtttctggaat 102657
>emb|AL163194.5|CNS01RIG Human chromosome 14 DNA sequence BAC R-120I18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161813 Score = 42.1 bits (21), Expect = 6.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1576 ccacaaggacaaaggttttgt 1596 ||||||||||||||||||||| Sbjct: 159645 ccacaaggacaaaggttttgt 159665 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 320,694,130 Number of extensions: 18258812 Number of successful extensions: 525792 Number of sequences better than 10.0: 157 Number of HSP's gapped: 525775 Number of HSP's successfully gapped: 219 Length of query: 1700 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1677 Effective length of database: 18,503,978,556 Effective search space: 31031172038412 Effective search space used: 31031172038412 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
