ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9f18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | AK109500:Os03g0698500 | 229 | 2e-60 | 2 | AK121352:Os12g0484700 | 120 | 2e-27 | 3 | AK066863:Os11g0551800 | 119 | 4e-27 | 4 | AK061812:Os11g0551800 | 119 | 4e-27 | 5 | AK073870:Os07g0584000 | 116 | 2e-26 | 6 | AK121032:Os03g0698500 | 75 | 5e-14 | 7 | AK071370:Os10g0369500 | 33 | 0.33 | 8 | AK099320:Os04g0629100 | 31 | 0.97 | 9 | AK065665:Os04g0629100 | 31 | 0.97 | 10 | AK058892:Os06g0127300 | 29 | 3.7 | 11 | Os11g0593000:Os11g0593000 | 28 | 6.3 | 12 | AK104282:Os06g0485100 | 28 | 6.3 | 13 | AK100769:Os03g0314200 | 28 | 6.3 | 14 | AK073906:Os06g0485100 | 28 | 6.3 | 15 | Os03g0183600:Os03g0183600 | 28 | 8.2 |
|---|
>AK109500:Os03g0698500 | Length = 129 Score = 229 bits (583), Expect = 2e-60 Identities = 108/131 (82%), Positives = 119/131 (90%) Frame = +3 Query: 207 MGRLFLMHLEGNAYSCKFCRAHLGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRMM 386 MGRLF+MHLEG YSCK C HLGL++DIISK+F KHGKAYLFN+VVNVTSG+ EDRMM Sbjct: 1 MGRLFVMHLEGKVYSCKHCHTHLGLSSDIISKSFHCKHGKAYLFNKVVNVTSGVKEDRMM 60 Query: 387 MTGLHTVSDIFCVGCGSIVGWKYEAAHEKSQRYKEGKFILERFKVSGPDGSHYWGVTHDA 566 +TG+HTVSDIFCVGCGSIVGWKYEAAHEKSQRYKEGKFILER+KVSGPDGSHY+ VTHDA Sbjct: 61 ITGMHTVSDIFCVGCGSIVGWKYEAAHEKSQRYKEGKFILERYKVSGPDGSHYF-VTHDA 119 Query: 567 HHGGGSDTDDL 599 H GGSD DD+ Sbjct: 120 -HVGGSDVDDV 129
>AK121352:Os12g0484700 | Length = 109 Score = 120 bits (300), Expect = 2e-27 Identities = 55/103 (53%), Positives = 75/103 (72%), Gaps = 1/103 (0%) Frame = +3 Query: 216 LFLMHLEG-NAYSCKFCRAHLGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMT 392 +F+ L G YSC CR H+ L DIISK FQ ++G+A+LF+ +NV G EDR +MT Sbjct: 2 VFMAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLMT 61 Query: 393 GLHTVSDIFCVGCGSIVGWKYEAAHEKSQRYKEGKFILERFKV 521 GLHTV+DI+C C ++GWKYE A+E++Q+YKEGKFI E+ K+ Sbjct: 62 GLHTVADIYCNDCREVLGWKYERAYEETQKYKEGKFIFEKSKI 104
>AK066863:Os11g0551800 | Length = 106 Score = 119 bits (297), Expect = 4e-27 Identities = 52/92 (56%), Positives = 70/92 (76%) Frame = +3 Query: 246 YSCKFCRAHLGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMTGLHTVSDIFCV 425 YSC CR H+ L DIISK FQ ++G+A+LF+ +N++ G EDR +MTGLHTV+DI+C Sbjct: 10 YSCCHCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNISMGPKEDRQLMTGLHTVADIYCR 69 Query: 426 GCGSIVGWKYEAAHEKSQRYKEGKFILERFKV 521 C ++GWKYE A E+SQ+YKEGKFI E+ K+ Sbjct: 70 DCREVLGWKYERAFEESQKYKEGKFIFEKAKI 101
>AK061812:Os11g0551800 | Length = 106 Score = 119 bits (297), Expect = 4e-27 Identities = 52/92 (56%), Positives = 70/92 (76%) Frame = +3 Query: 246 YSCKFCRAHLGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMTGLHTVSDIFCV 425 YSC CR H+ L DIISK FQ ++G+A+LF+ +N++ G EDR +MTGLHTV+DI+C Sbjct: 10 YSCCHCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNISMGPKEDRQLMTGLHTVADIYCR 69 Query: 426 GCGSIVGWKYEAAHEKSQRYKEGKFILERFKV 521 C ++GWKYE A E+SQ+YKEGKFI E+ K+ Sbjct: 70 DCREVLGWKYERAFEESQKYKEGKFIFEKAKI 101
>AK073870:Os07g0584000 | Length = 110 Score = 116 bits (290), Expect = 2e-26 Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 1/103 (0%) Frame = +3 Query: 207 MGRLFLMHLEG-NAYSCKFCRAHLGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRM 383 MG LF+ L G + CKFC I+SK F+ +HG+AYLF+ VVNV+ G EDR+ Sbjct: 1 MGLLFVESLPGPKVFKCKFCGVDSASPDAIVSKEFRGRHGRAYLFDSVVNVSLGPREDRL 60 Query: 384 MMTGLHTVSDIFCVGCGSIVGWKYEAAHEKSQRYKEGKFILER 512 +MTGLHTV+DI+C C ++GW+YE A+ + Q+YKEGK+ILE+ Sbjct: 61 LMTGLHTVNDIYCSCCQRLLGWRYEKAYSEDQKYKEGKYILEK 103
>AK121032:Os03g0698500 | Length = 57 Score = 75.5 bits (184), Expect = 5e-14 Identities = 32/36 (88%), Positives = 35/36 (97%) Frame = +3 Query: 348 VNVTSGINEDRMMMTGLHTVSDIFCVGCGSIVGWKY 455 VNVTSG+ EDRMM+TG+HTVSDIFCVGCGSIVGWKY Sbjct: 7 VNVTSGVKEDRMMITGMHTVSDIFCVGCGSIVGWKY 42
>AK071370:Os10g0369500 | Length = 79 Score = 32.7 bits (73), Expect = 0.33 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = +3 Query: 252 CKFCRAHLGLAADIISKNFQSKHGKAYLFNRV 347 C+ CR A I+S++F+ + G+AYLF+ V Sbjct: 25 CRRCRVDAASADAILSRDFRGRFGRAYLFDHV 56
>AK099320:Os04g0629100 | Length = 472 Score = 31.2 bits (69), Expect = 0.97 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +3 Query: 288 DIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMTGLHTVSDIFCVGC 431 D I NF SKHGK N+ I +D++++ H+++ I C C Sbjct: 45 DGIRVNFSSKHGKGVCANKEFAEGDLILKDQILVGAQHSLNKIDCAVC 92
>AK065665:Os04g0629100 | Length = 517 Score = 31.2 bits (69), Expect = 0.97 Identities = 16/48 (33%), Positives = 25/48 (52%) Frame = +3 Query: 288 DIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMTGLHTVSDIFCVGC 431 D I NF SKHGK N+ I +D++++ H+++ I C C Sbjct: 90 DGIRVNFSSKHGKGVCANKEFAEGDLILKDQILVGAQHSLNKIDCAVC 137
>AK058892:Os06g0127300 | Length = 294 Score = 29.3 bits (64), Expect = 3.7 Identities = 15/36 (41%), Positives = 17/36 (47%) Frame = -2 Query: 475 LFSCAASYFHPTMDPQPTQKISETVCSPVIIMRSSF 368 L SC+ T P Q +SE CSP RSSF Sbjct: 116 LASCSRDVSFNTGGPVACQSMSEEACSPTFACRSSF 151
>Os11g0593000:Os11g0593000 | Length = 535 Score = 28.5 bits (62), Expect = 6.3 Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 3/78 (3%) Frame = -3 Query: 819 HNKQLLGAT*YIRSYTEGIRSPSQLAGRISPRINNFTPEG---RF*MEASPPE*LRPDSR 649 H+ Q + Y +YT G SP+ G SP ++ F E R M ++ RP+ Sbjct: 68 HSFQAIYEQVYGDAYTWGTTSPATKPGVPSPPMSGFAQEAEKERAGMSSTVMNGFRPEKV 127 Query: 648 VIYRDEQQVFARRSRFIS 595 +YR+ + FA R+ + Sbjct: 128 PVYRELVREFAVCDRWFA 145
>AK104282:Os06g0485100 | Length = 370 Score = 28.5 bits (62), Expect = 6.3 Identities = 23/58 (39%), Positives = 27/58 (46%) Frame = -3 Query: 534 HRGPIP*TSPE*TSLPCTSGSSHVQPHISIQQWTRNQHRRYRKRYAALSSSCDPHLYQ 361 HR I + + TS P SG VQP Q W Q+RRY R + SS P L Q Sbjct: 35 HRSVIQALADKFTSSPARSGKVAVQPK---QVWNWFQNRRYSHR--SRSSRGPPTLMQ 87
>AK100769:Os03g0314200 | Length = 552 Score = 28.5 bits (62), Expect = 6.3 Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%) Frame = -2 Query: 535 PSGPDTLNLSRINFPS---LYLWLFSCAASYFHPTMD 434 PS PD L +F S Y+W+ +Y+HPT++ Sbjct: 335 PSKPDLPRLHEWHFRSGLDRYIWIVGMIYAYYHPTVE 371
>AK073906:Os06g0485100 | Length = 370 Score = 28.5 bits (62), Expect = 6.3 Identities = 23/58 (39%), Positives = 27/58 (46%) Frame = -3 Query: 534 HRGPIP*TSPE*TSLPCTSGSSHVQPHISIQQWTRNQHRRYRKRYAALSSSCDPHLYQ 361 HR I + + TS P SG VQP Q W Q+RRY R + SS P L Q Sbjct: 35 HRSVIQALADKFTSSPARSGKVAVQPK---QVWNWFQNRRYSHR--SRSSRGPPTLMQ 87
>Os03g0183600:Os03g0183600 | Length = 459 Score = 28.1 bits (61), Expect = 8.2 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%) Frame = +3 Query: 255 KFCRAH--LGLAADIISKNFQSKHGKAYLFNRVVNVTSGINEDRMMMTGLHTVSDIFCVG 428 KFC+ + LA ++ +N + K F ++ + G N D + + LH+VS + Sbjct: 223 KFCKDEELVLLADEVYQENIYVTNKKINSFKKIAR-SMGYNGDDLQLVSLHSVSKGYYGE 281 Query: 429 CGSIVGW 449 CG G+ Sbjct: 282 CGKRGGY 288 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 23,533,986 Number of extensions: 575233 Number of successful extensions: 1392 Number of sequences better than 10.0: 15 Number of HSP's gapped: 1391 Number of HSP's successfully gapped: 15 Length of query: 288 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 188 Effective length of database: 11,395,755 Effective search space: 2142401940 Effective search space used: 2142401940 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
