ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9e22 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8 Length = 28434780 Score = 260 bits (131), Expect = 2e-65 Identities = 230/263 (87%) Strand = Plus / Minus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 28178489 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 28178430 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 28178429 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 28178370 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 28178369 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 28178310 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 28178309 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 28178250 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 28178249 ctccagcgatcctggatcatcct 28178227 Score = 109 bits (55), Expect = 3e-20 Identities = 235/295 (79%) Strand = Plus / Minus Query: 743 cgctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtcca 802 |||||| ||||| ||||||||| || || ||||||| ||| || ||| | || ||||||| Sbjct: 28177912 cgctggcgcaggtggcctacataatggggtggtgcagggaggggtggcgcgggtggtcca 28177853 Query: 803 tggcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgc 862 ||||||| ||| ||||| || |||||| || || || | ||||| || || |||| Sbjct: 28177852 tggcggcgttccacgacctggccgccttcctccgcctgtccatcgagtcggcggtgatgc 28177793 Query: 863 tctgccttgagatttggtacctcggcatgatcaccgtcctcaccggcgacctccaggacg 922 | ||||| ||||| |||||||| ||| | |||||||||||||| || ||||| | |||| Sbjct: 28177792 tgtgcctcgagatatggtacctgggcctcatcaccgtcctcacgggggacctggacgacg 28177733 Query: 923 cgcagattgccgtcgactcgcttggcgtctgcatgaatataaacggatgggagggtatgg 982 | ||||| || ||||||||||| || |||||||||| || ||||| | ||||| ||| Sbjct: 28177732 cccagatggcggtcgactcgctggggatctgcatgaacatcaacggctacgagggcatga 28177673 Query: 983 tcttcattggcctcaatgctgctatcagtgttcgagtctccaacgagctgggctc 1037 ||||||| |||||||| || || ||||| || || || ||||||||||||||||| Sbjct: 28177672 tcttcatcggcctcaacgcggccatcagcgtccgggtgtccaacgagctgggctc 28177618 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 533 cgctctacatcctccccggcgccttctccttcgccgtcaacttccccaccgccaagttcc 592 |||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| Sbjct: 28178122 cgctctacatcctcccgggcgccttcgccttcgccgtgaacttcccgtcgggcaagttcc 28178063 Query: 593 tccaggcgcagagcaaggt 611 ||||||||||||||||||| Sbjct: 28178062 tccaggcgcagagcaaggt 28178044 Score = 87.7 bits (44), Expect = 1e-13 Identities = 47/48 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 378 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 23707990 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 23708037 Score = 79.8 bits (40), Expect = 3e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 1180 gccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgcagcct 1239 |||||||||| ||| || || ||||| || | |||||||||||||||||||||||||| Sbjct: 28177475 gccgtctccaggatcgctggcctgctcggggtcaccatggtgctcaacagcgtgcagccg 28177416 Query: 1240 gtgctttcaggggtggccattggaggaggatggcaaggccttgttgcatacatcaacctt 1299 ||||| || || |||||| | || || |||||||| ||||| || || ||||||||||| Sbjct: 28177415 gtgctgtccggtgtggccgtcggcggcggatggcagggcctcgtcgcctacatcaacctc 28177356 Query: 1300 ggttgctactac 1311 | ||||||||| Sbjct: 28177355 gcctgctactac 28177344 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 27587545 atggggagcgcgctggagacgctatgcgggca 27587514 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Minus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtc 612 |||| ||| |||| |||||||||||| | |||||||||||||| |||||||||||| Sbjct: 27587324 cttcgcctacgccctcaacttccccatccagaagttcctccaggcccagagcaaggtc 27587267 Score = 50.1 bits (25), Expect = 0.028 Identities = 67/81 (82%) Strand = Plus / Minus Query: 1368 ggggatttgggctggcatgctttgcggggttggacttcagacattgattttactcgtcat 1427 |||| |||||| ||||||||| || || |||| |||||| ||| | ||| ||||| | | Sbjct: 28177148 gggggtttggggtggcatgctctgtggagttgcacttcaaacactcattctactctttgt 28177089 Query: 1428 agtgtggagaacagactggaa 1448 ||| ||||||||||||||||| Sbjct: 28177088 agtctggagaacagactggaa 28177068 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 706 gccgccgtcgcctacgacctctc 728 ||||||||||||||||||||||| Sbjct: 4298075 gccgccgtcgcctacgacctctc 4298053 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Minus Query: 356 tgtgcgggcaggcgttcggcgccggcc 382 ||||||| ||||||||||||||||||| Sbjct: 27339337 tgtgcggccaggcgttcggcgccggcc 27339311 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1454 aggctgcgctagcttcaagccgtgtccaaaagtggggtggcaccgaagcaaccaaacctc 1513 ||||||||| ||||||| ||||| || |||||||| ||||| || | ||||||||||| Sbjct: 28176951 aggctgcgcaagcttcagctcgtgtgcacaagtggggaggcacagatgaaaccaaacctc 28176892 Query: 1514 tc 1515 || Sbjct: 28176891 tc 28176890 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1064 cggtcgtcgtcgtcgtcggcg 1084 ||||||||||||||||||||| Sbjct: 1033382 cggtcgtcgtcgtcgtcggcg 1033402 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 3742772 ggtcgtcgtcgtcgtcggcga 3742752
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 260 bits (131), Expect = 2e-65 Identities = 230/263 (87%) Strand = Plus / Minus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 61962 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 61903 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 61902 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 61843 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 61842 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 61783 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 61782 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 61723 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 61722 ctccagcgatcctggatcatcct 61700 Score = 109 bits (55), Expect = 3e-20 Identities = 235/295 (79%) Strand = Plus / Minus Query: 743 cgctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtcca 802 |||||| ||||| ||||||||| || || ||||||| ||| || ||| | || ||||||| Sbjct: 61385 cgctggcgcaggtggcctacataatggggtggtgcagggaggggtggcgcgggtggtcca 61326 Query: 803 tggcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgc 862 ||||||| ||| ||||| || |||||| || || || | ||||| || || |||| Sbjct: 61325 tggcggcgttccacgacctggccgccttcctccgcctgtccatcgagtcggcggtgatgc 61266 Query: 863 tctgccttgagatttggtacctcggcatgatcaccgtcctcaccggcgacctccaggacg 922 | ||||| ||||| |||||||| ||| | |||||||||||||| || ||||| | |||| Sbjct: 61265 tgtgcctcgagatatggtacctgggcctcatcaccgtcctcacgggggacctggacgacg 61206 Query: 923 cgcagattgccgtcgactcgcttggcgtctgcatgaatataaacggatgggagggtatgg 982 | ||||| || ||||||||||| || |||||||||| || ||||| | ||||| ||| Sbjct: 61205 cccagatggcggtcgactcgctggggatctgcatgaacatcaacggctacgagggcatga 61146 Query: 983 tcttcattggcctcaatgctgctatcagtgttcgagtctccaacgagctgggctc 1037 ||||||| |||||||| || || ||||| || || || ||||||||||||||||| Sbjct: 61145 tcttcatcggcctcaacgcggccatcagcgtccgggtgtccaacgagctgggctc 61091 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Minus Query: 533 cgctctacatcctccccggcgccttctccttcgccgtcaacttccccaccgccaagttcc 592 |||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| Sbjct: 61595 cgctctacatcctcccgggcgccttcgccttcgccgtgaacttcccgtcgggcaagttcc 61536 Query: 593 tccaggcgcagagcaaggt 611 ||||||||||||||||||| Sbjct: 61535 tccaggcgcagagcaaggt 61517 Score = 79.8 bits (40), Expect = 3e-11 Identities = 109/132 (82%) Strand = Plus / Minus Query: 1180 gccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgcagcct 1239 |||||||||| ||| || || ||||| || | |||||||||||||||||||||||||| Sbjct: 60948 gccgtctccaggatcgctggcctgctcggggtcaccatggtgctcaacagcgtgcagccg 60889 Query: 1240 gtgctttcaggggtggccattggaggaggatggcaaggccttgttgcatacatcaacctt 1299 ||||| || || |||||| | || || |||||||| ||||| || || ||||||||||| Sbjct: 60888 gtgctgtccggtgtggccgtcggcggcggatggcagggcctcgtcgcctacatcaacctc 60829 Query: 1300 ggttgctactac 1311 | ||||||||| Sbjct: 60828 gcctgctactac 60817 Score = 50.1 bits (25), Expect = 0.028 Identities = 67/81 (82%) Strand = Plus / Minus Query: 1368 ggggatttgggctggcatgctttgcggggttggacttcagacattgattttactcgtcat 1427 |||| |||||| ||||||||| || || |||| |||||| ||| | ||| ||||| | | Sbjct: 60621 gggggtttggggtggcatgctctgtggagttgcacttcaaacactcattctactctttgt 60562 Query: 1428 agtgtggagaacagactggaa 1448 ||| ||||||||||||||||| Sbjct: 60561 agtctggagaacagactggaa 60541 Score = 44.1 bits (22), Expect = 1.7 Identities = 52/62 (83%) Strand = Plus / Minus Query: 1454 aggctgcgctagcttcaagccgtgtccaaaagtggggtggcaccgaagcaaccaaacctc 1513 ||||||||| ||||||| ||||| || |||||||| ||||| || | ||||||||||| Sbjct: 60424 aggctgcgcaagcttcagctcgtgtgcacaagtggggaggcacagatgaaaccaaacctc 60365 Query: 1514 tc 1515 || Sbjct: 60364 tc 60363
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 260 bits (131), Expect = 2e-65 Identities = 230/263 (87%) Strand = Plus / Plus Query: 166 aagcgcctctggggcatcggcacgcccatcgccatcgccacgctcagcatgtacgccgtc 225 ||||| || |||| ||||||||| ||||||||||||| ||| ||| || |||||| || Sbjct: 136 aagcggctgtgggccatcggcacccccatcgccatcggcaccatcaccaactacgccatc 195 Query: 226 agctccgtcaccaccatcttcgtcggccaccttggcaacctgcccctcgccgccgcgtcc 285 |||||||| |||||||| ||| |||||||||| || ||||| |||||||||||||| ||| Sbjct: 196 agctccgtgaccaccatgttcatcggccacctcggaaacctccccctcgccgccgcctcc 255 Query: 286 atcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcgcg 345 | ||||||||||| |||||||||||||||||||| ||||| || |||||||| ||||| Sbjct: 256 gtgggcctctccgtgttcgccaccttcgccctcggcttcctcctgggcatgggcagcgcc 315 Query: 346 ctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtctac 405 ||||||||||||||||||||||||||||| ||||| |||||| ||||||| ||||||||| Sbjct: 316 ctggagacgctgtgcgggcaggcgttcggagccgggcaggtgtccatgctgggcgtctac 375 Query: 406 ctgcagcgctcctggatcgtcct 428 || ||||| ||||||||| |||| Sbjct: 376 ctccagcgatcctggatcatcct 398 Score = 109 bits (55), Expect = 3e-20 Identities = 235/295 (79%) Strand = Plus / Plus Query: 743 cgctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtcca 802 |||||| ||||| ||||||||| || || ||||||| ||| || ||| | || ||||||| Sbjct: 713 cgctggcgcaggtggcctacataatggggtggtgcagggaggggtggcgcgggtggtcca 772 Query: 803 tggcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgc 862 ||||||| ||| ||||| || |||||| || || || | ||||| || || |||| Sbjct: 773 tggcggcgttccacgacctggccgccttcctccgcctgtccatcgagtcggcggtgatgc 832 Query: 863 tctgccttgagatttggtacctcggcatgatcaccgtcctcaccggcgacctccaggacg 922 | ||||| ||||| |||||||| ||| | |||||||||||||| || ||||| | |||| Sbjct: 833 tgtgcctcgagatatggtacctgggcctcatcaccgtcctcacgggggacctggacgacg 892 Query: 923 cgcagattgccgtcgactcgcttggcgtctgcatgaatataaacggatgggagggtatgg 982 | ||||| || ||||||||||| || |||||||||| || ||||| | ||||| ||| Sbjct: 893 cccagatggcggtcgactcgctggggatctgcatgaacatcaacggctacgagggcatga 952 Query: 983 tcttcattggcctcaatgctgctatcagtgttcgagtctccaacgagctgggctc 1037 ||||||| |||||||| || || ||||| || || || ||||||||||||||||| Sbjct: 953 tcttcatcggcctcaacgcggccatcagcgtccgggtgtccaacgagctgggctc 1007 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 533 cgctctacatcctccccggcgccttctccttcgccgtcaacttccccaccgccaagttcc 592 |||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| Sbjct: 503 cgctctacatcctcccgggcgccttcgccttcgccgtgaacttcccgtcgggcaagttcc 562 Query: 593 tccaggcgcagagcaaggt 611 ||||||||||||||||||| Sbjct: 563 tccaggcgcagagcaaggt 581 Score = 79.8 bits (40), Expect = 3e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 1180 gccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgcagcct 1239 |||||||||| ||| || || ||||| || | |||||||||||||||||||||||||| Sbjct: 1150 gccgtctccaggatcgctggcctgctcggggtcaccatggtgctcaacagcgtgcagccg 1209 Query: 1240 gtgctttcaggggtggccattggaggaggatggcaaggccttgttgcatacatcaacctt 1299 ||||| || || |||||| | || || |||||||| ||||| || || ||||||||||| Sbjct: 1210 gtgctgtccggtgtggccgtcggcggcggatggcagggcctcgtcgcctacatcaacctc 1269 Query: 1300 ggttgctactac 1311 | ||||||||| Sbjct: 1270 gcctgctactac 1281 Score = 50.1 bits (25), Expect = 0.028 Identities = 67/81 (82%) Strand = Plus / Plus Query: 1368 ggggatttgggctggcatgctttgcggggttggacttcagacattgattttactcgtcat 1427 |||| |||||| ||||||||| || || |||| |||||| ||| | ||| ||||| | | Sbjct: 1477 gggggtttggggtggcatgctctgtggagttgcacttcaaacactcattctactctttgt 1536 Query: 1428 agtgtggagaacagactggaa 1448 ||| ||||||||||||||||| Sbjct: 1537 agtctggagaacagactggaa 1557
>ref|NM_001069058.1| Oryza sativa (japonica cultivar-group) Os08g0562800 (Os08g0562800) mRNA, complete cds Length = 1594 Score = 254 bits (128), Expect = 1e-63 Identities = 218/248 (87%) Strand = Plus / Plus Query: 181 atcggcacgcccatcgccatcgccacgctcagcatgtacgccgtcagctccgtcaccacc 240 |||||||| ||||||||||||| ||| ||| || |||||| |||||||||| |||||| Sbjct: 1 atcggcacccccatcgccatcggcaccatcaccaactacgccatcagctccgtgaccacc 60 Query: 241 atcttcgtcggccaccttggcaacctgcccctcgccgccgcgtccatcggcctctccgtc 300 || ||| |||||||||| || ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 61 atgttcatcggccacctcggaaacctccccctcgccgccgcctccgtgggcctctccgtg 120 Query: 301 ttcgccaccttcgccctcgggttcctactcggcatggggagcgcgctggagacgctgtgc 360 |||||||||||||||||||| ||||| || |||||||| ||||| ||||||||||||||| Sbjct: 121 ttcgccaccttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgc 180 Query: 361 gggcaggcgttcggcgccggccaggtggccatgctcggcgtctacctgcagcgctcctgg 420 |||||||||||||| ||||| |||||| ||||||| ||||||||||| ||||| |||||| Sbjct: 181 gggcaggcgttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctgg 240 Query: 421 atcgtcct 428 ||| |||| Sbjct: 241 atcatcct 248 Score = 127 bits (64), Expect = 1e-25 Identities = 268/336 (79%) Strand = Plus / Plus Query: 1180 gccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgcagcct 1239 |||||||||| ||| || || ||||| || | |||||||||||||||||||||||||| Sbjct: 1000 gccgtctccaggatcgctggcctgctcggggtcaccatggtgctcaacagcgtgcagccg 1059 Query: 1240 gtgctttcaggggtggccattggaggaggatggcaaggccttgttgcatacatcaacctt 1299 ||||| || || |||||| | || || |||||||| ||||| || || ||||||||||| Sbjct: 1060 gtgctgtccggtgtggccgtcggcggcggatggcagggcctcgtcgcctacatcaacctc 1119 Query: 1300 ggttgctactacattttcggattgccattgggatatctcctcggctacaagttcaactat 1359 | ||||||||| | || || | || | || || || ||||| ||| | |||||| Sbjct: 1120 gcctgctactacctctttggcctccccgtcggctaccttctcggttactacttcaacctc 1179 Query: 1360 ggagttggggggatttgggctggcatgctttgcggggttggacttcagacattgatttta 1419 ||||| |||||| |||||| ||||||||| || || |||| |||||| ||| | ||| || Sbjct: 1180 ggagtcgggggggtttggggtggcatgctctgtggagttgcacttcaaacactcattcta 1239 Query: 1420 ctcgtcatagtgtggagaacagactggaacacagaggctgcgctagcttcaagccgtgtc 1479 ||| | |||| ||||||||||||||||| |||||||||||| ||||||| ||||| Sbjct: 1240 ctctttgtagtctggagaacagactggaaggcagaggctgcgcaagcttcagctcgtgtg 1299 Query: 1480 caaaagtggggtggcaccgaagcaaccaaacctctc 1515 || |||||||| ||||| || | ||||||||||||| Sbjct: 1300 cacaagtggggaggcacagatgaaaccaaacctctc 1335 Score = 109 bits (55), Expect = 3e-20 Identities = 235/295 (79%) Strand = Plus / Plus Query: 743 cgctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtcca 802 |||||| ||||| ||||||||| || || ||||||| ||| || ||| | || ||||||| Sbjct: 563 cgctggcgcaggtggcctacataatggggtggtgcagggaggggtggcgcgggtggtcca 622 Query: 803 tggcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgc 862 ||||||| ||| ||||| || |||||| || || || | ||||| || || |||| Sbjct: 623 tggcggcgttccacgacctggccgccttcctccgcctgtccatcgagtcggcggtgatgc 682 Query: 863 tctgccttgagatttggtacctcggcatgatcaccgtcctcaccggcgacctccaggacg 922 | ||||| ||||| |||||||| ||| | |||||||||||||| || ||||| | |||| Sbjct: 683 tgtgcctcgagatatggtacctgggcctcatcaccgtcctcacgggggacctggacgacg 742 Query: 923 cgcagattgccgtcgactcgcttggcgtctgcatgaatataaacggatgggagggtatgg 982 | ||||| || ||||||||||| || |||||||||| || ||||| | ||||| ||| Sbjct: 743 cccagatggcggtcgactcgctggggatctgcatgaacatcaacggctacgagggcatga 802 Query: 983 tcttcattggcctcaatgctgctatcagtgttcgagtctccaacgagctgggctc 1037 ||||||| |||||||| || || ||||| || || || ||||||||||||||||| Sbjct: 803 tcttcatcggcctcaacgcggccatcagcgtccgggtgtccaacgagctgggctc 857 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 533 cgctctacatcctccccggcgccttctccttcgccgtcaacttccccaccgccaagttcc 592 |||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| Sbjct: 353 cgctctacatcctcccgggcgccttcgccttcgccgtgaacttcccgtcgggcaagttcc 412 Query: 593 tccaggcgcagagcaaggt 611 ||||||||||||||||||| Sbjct: 413 tccaggcgcagagcaaggt 431
>dbj|AK103815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147C23, full insert sequence Length = 1597 Score = 246 bits (124), Expect = 2e-61 Identities = 217/248 (87%) Strand = Plus / Plus Query: 181 atcggcacgcccatcgccatcgccacgctcagcatgtacgccgtcagctccgtcaccacc 240 |||||||| ||||||||||||| ||| ||| || |||||| |||||| ||| |||||| Sbjct: 2 atcggcacccccatcgccatcggcaccatcaccaactacgccatcagctacgtgaccacc 61 Query: 241 atcttcgtcggccaccttggcaacctgcccctcgccgccgcgtccatcggcctctccgtc 300 || ||| |||||||||| || ||||| |||||||||||||| ||| | ||||||||||| Sbjct: 62 atgttcatcggccacctcggaaacctccccctcgccgccgcctccgtgggcctctccgtg 121 Query: 301 ttcgccaccttcgccctcgggttcctactcggcatggggagcgcgctggagacgctgtgc 360 |||||||||||||||||||| ||||| || |||||||| ||||| ||||||||||||||| Sbjct: 122 ttcgccaccttcgccctcggcttcctcctgggcatgggcagcgccctggagacgctgtgc 181 Query: 361 gggcaggcgttcggcgccggccaggtggccatgctcggcgtctacctgcagcgctcctgg 420 |||||||||||||| ||||| |||||| ||||||| ||||||||||| ||||| |||||| Sbjct: 182 gggcaggcgttcggagccgggcaggtgtccatgctgggcgtctacctccagcgatcctgg 241 Query: 421 atcgtcct 428 ||| |||| Sbjct: 242 atcatcct 249 Score = 127 bits (64), Expect = 1e-25 Identities = 268/336 (79%) Strand = Plus / Plus Query: 1180 gccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgcagcct 1239 |||||||||| ||| || || ||||| || | |||||||||||||||||||||||||| Sbjct: 1001 gccgtctccaggatcgctggcctgctcggggtcaccatggtgctcaacagcgtgcagccg 1060 Query: 1240 gtgctttcaggggtggccattggaggaggatggcaaggccttgttgcatacatcaacctt 1299 ||||| || || |||||| | || || |||||||| ||||| || || ||||||||||| Sbjct: 1061 gtgctgtccggtgtggccgtcggcggcggatggcagggcctcgtcgcctacatcaacctc 1120 Query: 1300 ggttgctactacattttcggattgccattgggatatctcctcggctacaagttcaactat 1359 | ||||||||| | || || | || | || || || ||||| ||| | |||||| Sbjct: 1121 gcctgctactacctctttggcctccccgtcggctaccttctcggttactacttcaacctc 1180 Query: 1360 ggagttggggggatttgggctggcatgctttgcggggttggacttcagacattgatttta 1419 ||||| |||||| |||||| ||||||||| || || |||| |||||| ||| | ||| || Sbjct: 1181 ggagtcgggggggtttggggtggcatgctctgtggagttgcacttcaaacactcattcta 1240 Query: 1420 ctcgtcatagtgtggagaacagactggaacacagaggctgcgctagcttcaagccgtgtc 1479 ||| | |||| ||||||||||||||||| |||||||||||| ||||||| ||||| Sbjct: 1241 ctctttgtagtctggagaacagactggaaggcagaggctgcgcaagcttcagctcgtgtg 1300 Query: 1480 caaaagtggggtggcaccgaagcaaccaaacctctc 1515 || |||||||| ||||| || | ||||||||||||| Sbjct: 1301 cacaagtggggaggcacagatgaaaccaaacctctc 1336 Score = 109 bits (55), Expect = 3e-20 Identities = 235/295 (79%) Strand = Plus / Plus Query: 743 cgctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtcca 802 |||||| ||||| ||||||||| || || ||||||| ||| || ||| | || ||||||| Sbjct: 564 cgctggcgcaggtggcctacataatggggtggtgcagggaggggtggcgcgggtggtcca 623 Query: 803 tggcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgc 862 ||||||| ||| ||||| || |||||| || || || | ||||| || || |||| Sbjct: 624 tggcggcgttccacgacctggccgccttcctccgcctgtccatcgagtcggcggtgatgc 683 Query: 863 tctgccttgagatttggtacctcggcatgatcaccgtcctcaccggcgacctccaggacg 922 | ||||| ||||| |||||||| ||| | |||||||||||||| || ||||| | |||| Sbjct: 684 tgtgcctcgagatatggtacctgggcctcatcaccgtcctcacgggggacctggacgacg 743 Query: 923 cgcagattgccgtcgactcgcttggcgtctgcatgaatataaacggatgggagggtatgg 982 | ||||| || ||||||||||| || |||||||||| || ||||| | ||||| ||| Sbjct: 744 cccagatggcggtcgactcgctggggatctgcatgaacatcaacggctacgagggcatga 803 Query: 983 tcttcattggcctcaatgctgctatcagtgttcgagtctccaacgagctgggctc 1037 ||||||| |||||||| || || ||||| || || || ||||||||||||||||| Sbjct: 804 tcttcatcggcctcaacgcggccatcagcgtccgggtgtccaacgagctgggctc 858 Score = 101 bits (51), Expect = 8e-18 Identities = 72/79 (91%) Strand = Plus / Plus Query: 533 cgctctacatcctccccggcgccttctccttcgccgtcaacttccccaccgccaagttcc 592 |||||||||||||||| ||||||||| |||||||||| |||||||| | | |||||||| Sbjct: 354 cgctctacatcctcccgggcgccttcgccttcgccgtgaacttcccgtcgggcaagttcc 413 Query: 593 tccaggcgcagagcaaggt 611 ||||||||||||||||||| Sbjct: 414 tccaggcgcagagcaaggt 432
>ref|NM_001055086.1| Oryza sativa (japonica cultivar-group) Os02g0821500 (Os02g0821500) mRNA, complete cds Length = 1092 Score = 170 bits (86), Expect = 1e-38 Identities = 131/146 (89%) Strand = Plus / Plus Query: 284 ccatcggcctctccgtcttcgccaccttcgccctcgggttcctactcggcatggggagcg 343 ||||||||||||||||| || ||| |||| || |||| ||||| |||||||||||||||| Sbjct: 404 ccatcggcctctccgtcgtctccaacttctccttcggcttcctcctcggcatggggagcg 463 Query: 344 cgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggccatgctcggcgtct 403 ||||||||||||||||||||||||||||||| || || |||||||||||||| ||| ||| Sbjct: 464 cgctggagacgctgtgcgggcaggcgttcggggcggggcaggtggccatgctgggcatct 523 Query: 404 acctgcagcgctcctggatcgtcctc 429 || |||||||||| |||||| ||||| Sbjct: 524 acatgcagcgctcgtggatcatcctc 549 Score = 91.7 bits (46), Expect = 8e-15 Identities = 160/198 (80%) Strand = Plus / Plus Query: 685 ctcggatggggctccgcgggcgccgccgtcgcctacgacctctcgctctgggccatcgcg 744 ||||| |||||| ||| |||||||||| ||| |||||| |||| |||| || |||| Sbjct: 805 ctcggctggggcatcgccggcgccgccgccgcgtacgacgtctcctcctggctcaccgcg 864 Query: 745 ctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtccatg 804 |||| ||||| ||||||| || ||||||||||| |||||||||| |||| |||| Sbjct: 865 ctggcgcaggtggcctacgtcgtcggctggtgccgcgacggctggacgggcctgtcccgc 924 Query: 805 gcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgctc 864 ||| |||||||| | |||||||||||||||||||| || | ||||||||||||||| Sbjct: 925 aaggcgttcaacgagctctgggccttcgtcaagctctccctcgcctccgccgtcatgctc 984 Query: 865 tgccttgagatttggtac 882 ||||| ||||| |||||| Sbjct: 985 tgcctcgagatatggtac 1002 Score = 61.9 bits (31), Expect = 7e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 563 tcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtcctcgtgctcg 622 ||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 683 tcgccatcaacttccccacgcagaagttcctccaggcgcagagcaaggtgacggtgctgg 742 Query: 623 cctggatcggc 633 ||||||||||| Sbjct: 743 cctggatcggc 753
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2 Length = 35954743 Score = 139 bits (70), Expect = 4e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 35286679 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 35286738 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcctc 429 |||||||| ||| ||||| |||||||||| |||||| ||||| Sbjct: 35286739 gccatgctgggcatctacatgcagcgctcgtggatcatcctc 35286780 Score = 91.7 bits (46), Expect = 8e-15 Identities = 160/198 (80%) Strand = Plus / Plus Query: 685 ctcggatggggctccgcgggcgccgccgtcgcctacgacctctcgctctgggccatcgcg 744 ||||| |||||| ||| |||||||||| ||| |||||| |||| |||| || |||| Sbjct: 35287036 ctcggctggggcatcgccggcgccgccgccgcgtacgacgtctcctcctggctcaccgcg 35287095 Query: 745 ctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtccatg 804 |||| ||||| ||||||| || ||||||||||| |||||||||| |||| |||| Sbjct: 35287096 ctggcgcaggtggcctacgtcgtcggctggtgccgcgacggctggacgggcctgtcccgc 35287155 Query: 805 gcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgctc 864 ||| |||||||| | |||||||||||||||||||| || | ||||||||||||||| Sbjct: 35287156 aaggcgttcaacgagctctgggccttcgtcaagctctccctcgcctccgccgtcatgctc 35287215 Query: 865 tgccttgagatttggtac 882 ||||| ||||| |||||| Sbjct: 35287216 tgcctcgagatatggtac 35287233 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1175 ggcaggccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgc 1234 |||||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct: 11188648 ggcaggccgttgccaagattgcagggcttcttggtttgaccatggtgctcaacagtgtgc 11188589 Query: 1235 agcctgtg 1242 |||||||| Sbjct: 11188588 agcctgtg 11188581 Score = 61.9 bits (31), Expect = 7e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 563 tcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtcctcgtgctcg 622 ||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 35286914 tcgccatcaacttccccacgcagaagttcctccaggcgcagagcaaggtgacggtgctgg 35286973 Query: 623 cctggatcggc 633 ||||||||||| Sbjct: 35286974 cctggatcggc 35286984
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 139 bits (70), Expect = 4e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 37013 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 37072 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcctc 429 |||||||| ||| ||||| |||||||||| |||||| ||||| Sbjct: 37073 gccatgctgggcatctacatgcagcgctcgtggatcatcctc 37114 Score = 91.7 bits (46), Expect = 8e-15 Identities = 160/198 (80%) Strand = Plus / Plus Query: 685 ctcggatggggctccgcgggcgccgccgtcgcctacgacctctcgctctgggccatcgcg 744 ||||| |||||| ||| |||||||||| ||| |||||| |||| |||| || |||| Sbjct: 37370 ctcggctggggcatcgccggcgccgccgccgcgtacgacgtctcctcctggctcaccgcg 37429 Query: 745 ctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtccatg 804 |||| ||||| ||||||| || ||||||||||| |||||||||| |||| |||| Sbjct: 37430 ctggcgcaggtggcctacgtcgtcggctggtgccgcgacggctggacgggcctgtcccgc 37489 Query: 805 gcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgctc 864 ||| |||||||| | |||||||||||||||||||| || | ||||||||||||||| Sbjct: 37490 aaggcgttcaacgagctctgggccttcgtcaagctctccctcgcctccgccgtcatgctc 37549 Query: 865 tgccttgagatttggtac 882 ||||| ||||| |||||| Sbjct: 37550 tgcctcgagatatggtac 37567 Score = 61.9 bits (31), Expect = 7e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 563 tcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtcctcgtgctcg 622 ||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 37248 tcgccatcaacttccccacgcagaagttcctccaggcgcagagcaaggtgacggtgctgg 37307 Query: 623 cctggatcggc 633 ||||||||||| Sbjct: 37308 cctggatcggc 37318
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 139 bits (70), Expect = 4e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtg 387 ||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| Sbjct: 98729 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggggcggggcaggtg 98788 Query: 388 gccatgctcggcgtctacctgcagcgctcctggatcgtcctc 429 |||||||| ||| ||||| |||||||||| |||||| ||||| Sbjct: 98789 gccatgctgggcatctacatgcagcgctcgtggatcatcctc 98830 Score = 91.7 bits (46), Expect = 8e-15 Identities = 160/198 (80%) Strand = Plus / Plus Query: 685 ctcggatggggctccgcgggcgccgccgtcgcctacgacctctcgctctgggccatcgcg 744 ||||| |||||| ||| |||||||||| ||| |||||| |||| |||| || |||| Sbjct: 99086 ctcggctggggcatcgccggcgccgccgccgcgtacgacgtctcctcctggctcaccgcg 99145 Query: 745 ctggggcaggcggcctacatcatcggctggtgcaaggacggctggaggggctggtccatg 804 |||| ||||| ||||||| || ||||||||||| |||||||||| |||| |||| Sbjct: 99146 ctggcgcaggtggcctacgtcgtcggctggtgccgcgacggctggacgggcctgtcccgc 99205 Query: 805 gcggcattcaacgacatgtgggccttcgtcaagctctcgcttgagtccgccgtcatgctc 864 ||| |||||||| | |||||||||||||||||||| || | ||||||||||||||| Sbjct: 99206 aaggcgttcaacgagctctgggccttcgtcaagctctccctcgcctccgccgtcatgctc 99265 Query: 865 tgccttgagatttggtac 882 ||||| ||||| |||||| Sbjct: 99266 tgcctcgagatatggtac 99283 Score = 61.9 bits (31), Expect = 7e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 563 tcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtcctcgtgctcg 622 ||||| ||||||||||||| |||||||||||||||||||||||||| ||||| | Sbjct: 98964 tcgccatcaacttccccacgcagaagttcctccaggcgcagagcaaggtgacggtgctgg 99023 Query: 623 cctggatcggc 633 ||||||||||| Sbjct: 99024 cctggatcggc 99034
>gb|AY107628.1| Zea mays PCO087035 mRNA sequence Length = 754 Score = 133 bits (67), Expect = 2e-27 Identities = 151/179 (84%) Strand = Plus / Plus Query: 1213 accatggtgctcaacagcgtgcagcctgtgctttcaggggtggccattggaggaggatgg 1272 |||||||||||||||||||||||||| ||| |||||||||| || |||| || |||||| Sbjct: 96 accatggtgctcaacagcgtgcagcccgtggtttcaggggtcgcggttgggggcggatgg 155 Query: 1273 caaggccttgttgcatacatcaaccttggttgctactacattttcggattgccattggga 1332 || ||||| || || ||||||||||| || |||||||| || ||||| |||| |||| Sbjct: 156 cagggcctcgtcgcctacatcaacctcggctgctactatatcttcggcctgcccctgggc 215 Query: 1333 tatctcctcggctacaagttcaactatggagttggggggatttgggctggcatgctttg 1391 || | ||||| |||||||||| || ||||||||||||||||||| | ||||||||||| Sbjct: 216 tacttgctcggatacaagttcagctttggagttggggggatttggtccggcatgctttg 274 Score = 48.1 bits (24), Expect = 0.11 Identities = 54/64 (84%) Strand = Plus / Plus Query: 1432 tggagaacagactggaacacagaggctgcgctagcttcaagccgtgtccaaaagtggggt 1491 ||||| ||||| ||||| ||||||| || | ||||||| ||||||| ||||||||||| Sbjct: 315 tggaggacagattggaaagcagaggccgcacaagcttcaggccgtgtgcaaaagtggggc 374 Query: 1492 ggca 1495 |||| Sbjct: 375 ggca 378
>ref|NM_001068591.1| Oryza sativa (japonica cultivar-group) Os08g0480000 (Os08g0480000) mRNA, complete cds Length = 2065 Score = 91.7 bits (46), Expect = 8e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcg 376 |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 365 tcggtttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcg 424 Query: 377 cc 378 || Sbjct: 425 cc 426 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1222 ctcaacagcgtgcagcctgtgctttcaggggtggccattgg 1262 ||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1273 ctcaacagcgtgcagcccgtcctctcaggtgtggccattgg 1313
>gb|BT009378.1| Triticum aestivum clone wlm96.pk031.e10:fis, full insert mRNA sequence Length = 1558 Score = 91.7 bits (46), Expect = 8e-15 Identities = 55/58 (94%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 |||||||||| || ||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 145 tcgggttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcgg 202 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 401 tctacctgcagcgctcctggatcgt 425 |||||||||||||||| |||||||| Sbjct: 229 tctacctgcagcgctcgtggatcgt 253 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 661 gtcacctacctcctcgtcacc 681 ||||||||||||||||||||| Sbjct: 489 gtcacctacctcctcgtcacc 509
>dbj|AK067748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118K06, full insert sequence Length = 2067 Score = 91.7 bits (46), Expect = 8e-15 Identities = 58/62 (93%) Strand = Plus / Plus Query: 317 tcgggttcctactcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcg 376 |||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 366 tcggtttcctgctgggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcg 425 Query: 377 cc 378 || Sbjct: 426 cc 427 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Plus Query: 1222 ctcaacagcgtgcagcctgtgctttcaggggtggccattgg 1262 ||||||||||||||||| || || ||||| ||||||||||| Sbjct: 1274 ctcaacagcgtgcagcccgtcctctcaggtgtggccattgg 1314
>ref|NM_001053138.1| Oryza sativa (japonica cultivar-group) Os02g0294100 (Os02g0294100) mRNA, complete cds Length = 4680 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1175 ggcaggccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgc 1234 |||||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct: 4323 ggcaggccgttgccaagattgcagggcttcttggtttgaccatggtgctcaacagtgtgc 4382 Query: 1235 agcctgtg 1242 |||||||| Sbjct: 4383 agcctgtg 4390
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 87.7 bits (44), Expect = 1e-13 Identities = 47/48 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 378 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 115586 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgcc 115633
>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1057_D08 Length = 119557 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Minus Query: 1175 ggcaggccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgc 1234 |||||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct: 107827 ggcaggccgttgccaagattgcagggcttcttggtttgaccatggtgctcaacagtgtgc 107768 Query: 1235 agcctgtg 1242 |||||||| Sbjct: 107767 agcctgtg 107760
>dbj|AK066590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074I12, full insert sequence Length = 4684 Score = 87.7 bits (44), Expect = 1e-13 Identities = 62/68 (91%) Strand = Plus / Plus Query: 1175 ggcaggccgtctccaagattgcaggactgcttggcttgaccatggtgctcaacagcgtgc 1234 |||||||||| ||||||||||||| || ||||| |||||||||||||||||||| |||| Sbjct: 4325 ggcaggccgttgccaagattgcagggcttcttggtttgaccatggtgctcaacagtgtgc 4384 Query: 1235 agcctgtg 1242 |||||||| Sbjct: 4385 agcctgtg 4392
>dbj|AK240698.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J043012N12, full insert sequence Length = 1869 Score = 85.7 bits (43), Expect = 5e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 428 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 474
>dbj|AK242068.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J075131A06, full insert sequence Length = 1873 Score = 85.7 bits (43), Expect = 5e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 427 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 473
>ref|NM_001050888.1| Oryza sativa (japonica cultivar-group) Os01g0766000 (Os01g0766000) mRNA, complete cds Length = 1455 Score = 85.7 bits (43), Expect = 5e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 253 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 312 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 313 atgctgggcgtctacctgcagcg 335 Score = 42.1 bits (21), Expect = 6.8 Identities = 36/41 (87%) Strand = Plus / Plus Query: 1222 ctcaacagcgtgcagcctgtgctttcaggggtggccattgg 1262 ||||||||| | ||||| ||||| ||||||||||| ||||| Sbjct: 1147 ctcaacagcatccagccggtgctatcaggggtggcgattgg 1187
>gb|BT018805.1| Zea mays clone EL01N0529G01.d mRNA sequence Length = 1984 Score = 85.7 bits (43), Expect = 5e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 440 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 486
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 85.7 bits (43), Expect = 5e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 4595959 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 4596005 Score = 73.8 bits (37), Expect = 2e-09 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 23673685 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 23673626 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 23673625 atgctaggcgtctacatccaacgctcatggatc 23673593 Score = 71.9 bits (36), Expect = 8e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 20597828 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgc 20597785 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 20672195 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 20672149 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 20529134 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 20529095 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 20579629 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 20579590 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Minus Query: 826 gccttcgtcaagctctcgcttgagtccgccgtcatgctctg 866 |||||||||||||||||||| | |||||| |||||||||| Sbjct: 23673187 gccttcgtcaagctctcgctcgcctccgccatcatgctctg 23673147 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 3434788 ggtcgtcgtcgtcgtcggcga 3434768 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 20528910 cttcgcctacgccgccaacttccccatccagaagttcctgcaggcgcagagca 20528858 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 850 tccgccgtcatgctctgccttgaga 874 |||||||||||||||||||| |||| Sbjct: 20597306 tccgccgtcatgctctgcctcgaga 20597282
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 85.7 bits (43), Expect = 5e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 32265083 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 32265024 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 32265023 atgctgggcgtctacctgcagcg 32265001 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1052 cggcgttgcacgcggtcgtcgtcgtcgtcg 1081 |||||||||| |||| |||||||||||||| Sbjct: 36052349 cggcgttgcatgcggccgtcgtcgtcgtcg 36052378 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 15136849 caccttcctcctcgtcaccgtcctc 15136825 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1062 cgcggtcgtcgtcgtcgtcggcgag 1086 |||||||||||||||||||| |||| Sbjct: 24051920 cgcggtcgtcgtcgtcgtcgtcgag 24051896
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 85.7 bits (43), Expect = 5e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||||||||||||||||||||||||||||||| | || ||||| ||| | Sbjct: 135836 ggcatggggagcgcgctggagacgctgtgcgggcaggcggtgggggccgggcagccgcgg 135777 Query: 391 atgctcggcgtctacctgcagcg 413 ||||| ||||||||||||||||| Sbjct: 135776 atgctgggcgtctacctgcagcg 135754
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 85.7 bits (43), Expect = 5e-13 Identities = 46/47 (97%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 36799 ggcatggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 36845
>ref|NM_001055750.1| Oryza sativa (japonica cultivar-group) Os03g0188100 (Os03g0188100) mRNA, complete cds Length = 1170 Score = 79.8 bits (40), Expect = 3e-11 Identities = 43/44 (97%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1 atggcgagcgcgctggagacgctgtgcgggcaggcgttcggcgc 44
>ref|NM_001070821.1| Oryza sativa (japonica cultivar-group) Os10g0195000 (Os10g0195000) mRNA, complete cds Length = 1740 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 271 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 330 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 331 gtgctcggcctctacgtgcagcagtcgtggatcgt 365
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 25451 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 25510 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 25511 gtgctcggcctctacgtgcagcagtcgtggatcgt 25545
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 6227893 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 6227952 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 6227953 gtgctcggcctctacgtgcagcagtcgtggatcgt 6227987 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9778350 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9778398 Score = 65.9 bits (33), Expect = 5e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9718728 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9718680 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 9736980 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 9736933 Score = 56.0 bits (28), Expect = 5e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 353 cgctgtgcgggcaggcgttcggcgccgg 380 |||||||||||||||||||||||||||| Sbjct: 9742841 cgctgtgcgggcaggcgttcggcgccgg 9742868 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 5946537 ctggacacgctgtgcggccaggcgttcggcgc 5946568
>dbj|AK106877.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-E04, full insert sequence Length = 1740 Score = 77.8 bits (39), Expect = 1e-10 Identities = 81/95 (85%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||| |||||||||| |||||||||||||||||| | |||||||| | | ||| | Sbjct: 271 ggcatggggtgcgcgctggacacgctgtgcgggcaggcggtgggcgccgggcggctggac 330 Query: 391 atgctcggcgtctacctgcagcgctcctggatcgt 425 |||||||| ||||| |||||| || |||||||| Sbjct: 331 gtgctcggcctctacgtgcagcagtcgtggatcgt 365
>ref|NM_001070928.1| Oryza sativa (japonica cultivar-group) Os10g0344900 (Os10g0344900) mRNA, complete cds Length = 1758 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 323 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 371
>ref|NM_001066320.1| Oryza sativa (japonica cultivar-group) Os07g0516600 (Os07g0516600) mRNA, complete cds Length = 1857 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 407 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 459 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 634 cttcgcctacgccgccaacttccccatccagaagttcctccaggcgcagagca 686
>ref|NM_001057238.1| Oryza sativa (japonica cultivar-group) Os03g0626700 (Os03g0626700) mRNA, complete cds Length = 1914 Score = 73.8 bits (37), Expect = 2e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 385 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 444 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 445 atgctaggcgtctacatccaacgctcatggatc 477 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 826 gccttcgtcaagctctcgcttgagtccgccgtcatgctctgccttgagatttggtac 882 |||||||||||||||||||| | |||||| ||||||||||| | ||| |||||||| Sbjct: 883 gccttcgtcaagctctcgctcgcctccgccatcatgctctgcttggagctttggtac 939
>gb|AC091246.8| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0002I03 map E1419S, complete sequence Length = 150945 Score = 73.8 bits (37), Expect = 2e-09 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 128740 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 128681 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 128680 atgctaggcgtctacatccaacgctcatggatc 128648 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Minus Query: 826 gccttcgtcaagctctcgcttgagtccgccgtcatgctctg 866 |||||||||||||||||||| | |||||| |||||||||| Sbjct: 128242 gccttcgtcaagctctcgctcgcctccgccatcatgctctg 128202
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 130875 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 130923 Score = 65.9 bits (33), Expect = 5e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 71253 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 71205 Score = 63.9 bits (32), Expect = 2e-06 Identities = 44/48 (91%) Strand = Plus / Minus Query: 330 cggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 89505 cggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 89458 Score = 56.0 bits (28), Expect = 5e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 353 cgctgtgcgggcaggcgttcggcgccgg 380 |||||||||||||||||||||||||||| Sbjct: 95366 cgctgtgcgggcaggcgttcggcgccgg 95393
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 19858295 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 19858347 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 18904863 ctggagacgctgtgcgggcaggcgtacggcgc 18904832 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 19858522 cttcgcctacgccgccaacttccccatccagaagttcctccaggcgcagagca 19858574 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1063 gcggtcgtcgtcgtcgtcggcg 1084 |||||||||||||||||||||| Sbjct: 17442984 gcggtcgtcgtcgtcgtcggcg 17443005 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 2239404 ggtcgtcgtcgtcgtcggcga 2239424 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1063 gcggtcgtcgtcgtcgtcggc 1083 ||||||||||||||||||||| Sbjct: 23651005 gcggtcgtcgtcgtcgtcggc 23650985
>gb|AC092390.3| Oryza sativa chromosome 3 BAC OSJNBb0013K08 genomic sequence, complete sequence Length = 120116 Score = 73.8 bits (37), Expect = 2e-09 Identities = 79/93 (84%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 12711 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 12652 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 12651 atgctaggcgtctacatccaacgctcatggatc 12619 Score = 50.1 bits (25), Expect = 0.028 Identities = 37/41 (90%) Strand = Plus / Minus Query: 826 gccttcgtcaagctctcgcttgagtccgccgtcatgctctg 866 |||||||||||||||||||| | |||||| |||||||||| Sbjct: 12213 gccttcgtcaagctctcgctcgcctccgccatcatgctctg 12173
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 10829 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 10877
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 22945 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 22997 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 23172 cttcgcctacgccgccaacttccccatccagaagttcctccaggcgcagagca 23224
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 98454 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 98506 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 98681 cttcgcctacgccgccaacttccccatccagaagttcctccaggcgcagagca 98733
>dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025C14, full insert sequence Length = 1864 Score = 73.8 bits (37), Expect = 2e-09 Identities = 49/53 (92%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccgg 380 ||||| ||||| |||||| |||||||||||||||||||||||| ||||||||| Sbjct: 413 ctcgggatgggcagcgcggtggagacgctgtgcgggcaggcgtacggcgccgg 465 Score = 50.1 bits (25), Expect = 0.028 Identities = 46/53 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||||||||||||||||| Sbjct: 640 cttcgcctacgccgccaacttccccatccagaagttcctccaggcgcagagca 692
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 313 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 361
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 73.8 bits (37), Expect = 2e-09 Identities = 46/49 (93%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 324 tcggcatggcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 372
>dbj|AK068484.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153I24, full insert sequence Length = 1915 Score = 73.8 bits (37), Expect = 2e-09 Identities = 79/93 (84%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgccggccaggtggcc 390 ||||||||||| ||| |||||||| |||||||||||||| | || || || |||||| || Sbjct: 386 ggcatggggagtgcgttggagacgttgtgcgggcaggcggtgggtgctgggcaggtgtcc 445 Query: 391 atgctcggcgtctacctgcagcgctcctggatc 423 ||||| ||||||||| | || ||||| |||||| Sbjct: 446 atgctaggcgtctacatccaacgctcatggatc 478 Score = 58.0 bits (29), Expect = 1e-04 Identities = 50/57 (87%) Strand = Plus / Plus Query: 826 gccttcgtcaagctctcgcttgagtccgccgtcatgctctgccttgagatttggtac 882 |||||||||||||||||||| | |||||| ||||||||||| | ||| |||||||| Sbjct: 884 gccttcgtcaagctctcgctcgcctccgccatcatgctctgcttggagctttggtac 940
>dbj|AK243209.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100042C13, full insert sequence Length = 1901 Score = 71.9 bits (36), Expect = 8e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 479 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgc 522 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttgaga 874 |||||||||||||||||||| |||| Sbjct: 1001 tccgccgtcatgctctgcctcgaga 1025
>ref|NM_001057057.1| Oryza sativa (japonica cultivar-group) Os03g0571900 (Os03g0571900) mRNA, complete cds Length = 3297 Score = 71.9 bits (36), Expect = 8e-09 Identities = 42/44 (95%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 2107 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgc 2150 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttgaga 874 |||||||||||||||||||| |||| Sbjct: 2629 tccgccgtcatgctctgcctcgaga 2653
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 71.9 bits (36), Expect = 8e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||||||| |||||||||||||||||||||||| |||||| Sbjct: 18556 atggggagcgcggtggagacgctgtgcgggcaggcgtacggcgc 18513 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 92923 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 92877 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 357 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 318 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 850 tccgccgtcatgctctgccttgaga 874 |||||||||||||||||||| |||| Sbjct: 18034 tccgccgtcatgctctgcctcgaga 18010
>gb|BT024034.1| Zea mays clone EL01N0423H06 mRNA sequence Length = 1933 Score = 69.9 bits (35), Expect = 3e-08 Identities = 44/47 (93%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||||||||||||||||||| || ||||||||||||||| Sbjct: 402 ggcatggcgagcgcgctggagacgctgtccgtgcaggcgttcggcgc 448
>ref|NM_001070927.1| Oryza sativa (japonica cultivar-group) Os10g0344000 (Os10g0344000) mRNA, partial cds Length = 1782 Score = 65.9 bits (33), Expect = 5e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 421 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 469
>gb|BT019018.1| Zea mays clone Contig516.F mRNA sequence Length = 1546 Score = 65.9 bits (33), Expect = 5e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 345 gctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||||||||||| Sbjct: 14 gctggagacgctgtgcgggcaggcgttcggcgc 46
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 65.9 bits (33), Expect = 5e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 329 tcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 |||||||| |||||||||||| ||||||||||||||||||| |||||| Sbjct: 421 tcggcatgtcgagcgcgctggacacgctgtgcgggcaggcgtacggcgc 469
>emb|AM183309.1| Colocasia esculenta microsatellite, clone Ces-1B03 Length = 242 Score = 63.9 bits (32), Expect = 2e-06 Identities = 35/36 (97%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcgg 374 |||||||||||||||||||||||||||||| ||||| Sbjct: 178 gagcgcgctggagacgctgtgcgggcaggccttcgg 213
>ref|NM_001057059.1| Oryza sativa (japonica cultivar-group) Os03g0572900 (Os03g0572900) mRNA, complete cds Length = 1917 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 356 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 402
>dbj|AK102204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G07, full insert sequence Length = 1918 Score = 61.9 bits (31), Expect = 7e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 328 ctcggcatggggagcgcgctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||| ||||| |||||||||||||||||||||||||||| Sbjct: 357 ctcggaatgggtagcgccgtggagacgctgtgcgggcaggcgttcgg 403
>emb|CT835816.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN091P09, full insert sequence Length = 535 Score = 60.0 bits (30), Expect = 3e-05 Identities = 45/49 (91%), Gaps = 2/49 (4%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgc--tgtgcgggcaggcgttcggcgccgg 380 |||| |||||||||||| |||| ||||||||||||||||||||||||| Sbjct: 245 atggcgagcgcgctggacacgcgctgtgcgggcaggcgttcggcgccgg 293
>ref|NM_001068980.1| Oryza sativa (japonica cultivar-group) Os08g0550200 (Os08g0550200) mRNA, complete cds Length = 1935 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 438 atggggagcgcgctggagacgctatgcgggca 469 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtc 612 |||| ||| |||| |||||||||||| | |||||||||||||| |||||||||||| Sbjct: 659 cttcgcctacgccctcaacttccccatccagaagttcctccaggcccagagcaaggtc 716
>ref|NM_001066259.1| Oryza sativa (japonica cultivar-group) Os07g0502200 (Os07g0502200) mRNA, complete cds Length = 1622 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 387 ctggagacgctgtgcgggcaggcgtacggcgc 418
>ref|NM_001057055.1| Oryza sativa (japonica cultivar-group) Os03g0570800 (Os03g0570800) mRNA, complete cds Length = 1732 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 408 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 447 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 632 cttcgcctacgccgccaacttccccatccagaagttcctgcaggcgcagagca 684
>gb|AC091302.5| Oryza sativa chromosome 3 BAC OSJNBb0015I21 genomic sequence, complete sequence Length = 101073 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 50170 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 50131 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 |||||||| |||||| ||||||||||||| |||||||||| Sbjct: 100665 ggcatgggaagcgcggtggagacgctgtgtgggcaggcgt 100626 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Minus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 49946 cttcgcctacgccgccaacttccccatccagaagttcctgcaggcgcagagca 49894
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 6848 ctggagacgctgtgcgggcaggcgtacggcgc 6817
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 69835 atggggagcgcgctggagacgctatgcgggca 69804 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Minus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtc 612 |||| ||| |||| |||||||||||| | |||||||||||||| |||||||||||| Sbjct: 69614 cttcgcctacgccctcaacttccccatccagaagttcctccaggcccagagcaaggtc 69557
>dbj|AK120682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C05, full insert sequence Length = 1623 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||||||||||||||||| |||||| Sbjct: 388 ctggagacgctgtgcgggcaggcgtacggcgc 419
>dbj|AK101639.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055G23, full insert sequence Length = 1734 Score = 56.0 bits (28), Expect = 5e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgt 370 ||||||||||| ||| ||||||||||||||||||| |||| Sbjct: 410 ggcatggggagtgcggtggagacgctgtgcgggcaagcgt 449 Score = 42.1 bits (21), Expect = 6.8 Identities = 45/53 (84%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagca 607 |||| ||| ||||| ||||||||||| | |||||||| ||||||||||||| Sbjct: 634 cttcgcctacgccgccaacttccccatccagaagttcctgcaggcgcagagca 686
>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full insert sequence Length = 1936 Score = 56.0 bits (28), Expect = 5e-04 Identities = 31/32 (96%) Strand = Plus / Plus Query: 334 atggggagcgcgctggagacgctgtgcgggca 365 ||||||||||||||||||||||| |||||||| Sbjct: 439 atggggagcgcgctggagacgctatgcgggca 470 Score = 52.0 bits (26), Expect = 0.007 Identities = 50/58 (86%) Strand = Plus / Plus Query: 555 cttctccttcgccgtcaacttccccaccgccaagttcctccaggcgcagagcaaggtc 612 |||| ||| |||| |||||||||||| | |||||||||||||| |||||||||||| Sbjct: 660 cttcgcctacgccctcaacttccccatccagaagttcctccaggcccagagcaaggtc 717
>dbj|AK243650.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J100088H20, full insert sequence Length = 1958 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 397 ctggacacgctgtgcgggcaggcgttcgg 425
>ref|NM_001059108.1| Oryza sativa (japonica cultivar-group) Os04g0373400 (Os04g0373400) mRNA, complete cds Length = 1467 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 280 ctggacacgctgtgcgggcaggcgttcgg 308
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4 Length = 35498469 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 18223993 ctggacacgctgtgcgggcaggcgttcgg 18224021
>emb|AL662979.3|OSJN00179 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0069D17, complete sequence Length = 147111 Score = 50.1 bits (25), Expect = 0.028 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcgg 374 ||||| ||||||||||||||||||||||| Sbjct: 59667 ctggacacgctgtgcgggcaggcgttcgg 59695
>emb|AM238664.1| Streptomyces ambofaciens ATCC 23877 right chromosomal arm Length = 1367119 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 cctcggccaggacgccaccgtcgc 512 |||||||||||||||||||||||| Sbjct: 160515 cctcggccaggacgccaccgtcgc 160492
>ref|NM_001070811.1| Oryza sativa (japonica cultivar-group) Os10g0190900 (Os10g0190900) mRNA, complete cds Length = 1470 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Plus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 381 ctggacacgctgtgcggccaggcgttcggcgc 412
>emb|AM279695.1| Streptomyces ambofaciens DSM 40697 right terminal inverted repeat Length = 237382 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 cctcggccaggacgccaccgtcgc 512 |||||||||||||||||||||||| Sbjct: 173043 cctcggccaggacgccaccgtcgc 173020
>emb|AM279694.1| Streptomyces ambofaciens DSM 40697 left terminal inverted repeat Length = 238517 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 cctcggccaggacgccaccgtcgc 512 |||||||||||||||||||||||| Sbjct: 173043 cctcggccaggacgccaccgtcgc 173020
>dbj|AK226424.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL06-10-E16 Length = 1687 Score = 48.1 bits (24), Expect = 0.11 Identities = 84/104 (80%) Strand = Plus / Plus Query: 1213 accatggtgctcaacagcgtgcagcctgtgctttcaggggtggccattggaggaggatgg 1272 |||||||| |||||||| |||||||| || |||| || ||||| ||||||| || ||| Sbjct: 1239 accatggttctcaacagtgtgcagccggttgtttctggtgtggctgttggaggcggttgg 1298 Query: 1273 caaggccttgttgcatacatcaaccttggttgctactacatttt 1316 |||||| | || || || |||||| | || || ||||||||||| Sbjct: 1299 caaggcttagtggcctatatcaacttgggctgttactacatttt 1342
>dbj|AK230089.1| Arabidopsis thaliana mRNA for hypothetical protein, partial cds, clone: RAFL22-73-G14 Length = 613 Score = 48.1 bits (24), Expect = 0.11 Identities = 84/104 (80%) Strand = Plus / Plus Query: 1213 accatggtgctcaacagcgtgcagcctgtgctttcaggggtggccattggaggaggatgg 1272 |||||||| |||||||| |||||||| || |||| || ||||| ||||||| || ||| Sbjct: 154 accatggttctcaacagtgtgcagccggttgtttctggtgtggctgttggaggcggttgg 213 Query: 1273 caaggccttgttgcatacatcaaccttggttgctactacatttt 1316 |||||| | || || || |||||| | || || ||||||||||| Sbjct: 214 caaggcttagtggcctatatcaacttgggctgttactacatttt 257
>emb|AJ937741.1| Streptomyces ambofaciens ATCC 23877 right terminal inverted repeat Length = 243019 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 cctcggccaggacgccaccgtcgc 512 |||||||||||||||||||||||| Sbjct: 160515 cctcggccaggacgccaccgtcgc 160492
>emb|AJ937740.1| Streptomyces ambofaciens ATCC 23877 left terminal inverted repeat Length = 273746 Score = 48.1 bits (24), Expect = 0.11 Identities = 24/24 (100%) Strand = Plus / Minus Query: 489 cctcggccaggacgccaccgtcgc 512 |||||||||||||||||||||||| Sbjct: 160515 cctcggccaggacgccaccgtcgc 160492
>ref|NM_118696.3| Arabidopsis thaliana antiporter/ drug transporter (AT4G25640) mRNA, complete cds Length = 1790 Score = 48.1 bits (24), Expect = 0.11 Identities = 84/104 (80%) Strand = Plus / Plus Query: 1213 accatggtgctcaacagcgtgcagcctgtgctttcaggggtggccattggaggaggatgg 1272 |||||||| |||||||| |||||||| || |||| || ||||| ||||||| || ||| Sbjct: 1238 accatggttctcaacagtgtgcagccggttgtttctggtgtggctgttggaggcggttgg 1297 Query: 1273 caaggccttgttgcatacatcaaccttggttgctactacatttt 1316 |||||| | || || || |||||| | || || ||||||||||| Sbjct: 1298 caaggcttagtggcctatatcaacttgggctgttactacatttt 1341
>gb|AC097278.6| Oryza sativa chromosome 10 BAC OSJNBa0040E17 genomic sequence, complete sequence Length = 151673 Score = 48.1 bits (24), Expect = 0.11 Identities = 30/32 (93%) Strand = Plus / Minus Query: 346 ctggagacgctgtgcgggcaggcgttcggcgc 377 ||||| ||||||||||| |||||||||||||| Sbjct: 119776 ctggacacgctgtgcggccaggcgttcggcgc 119745
>gb|DQ245344.1| Zea mays clone 14631 mRNA sequence Length = 847 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1062 cgcggtcgtcgtcgtcgtcggcg 1084 ||||||||||||||||||||||| Sbjct: 525 cgcggtcgtcgtcgtcgtcggcg 503
>dbj|AK241762.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065205D04, full insert sequence Length = 800 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 706 gccgccgtcgcctacgacctctc 728 ||||||||||||||||||||||| Sbjct: 283 gccgccgtcgcctacgacctctc 305
>ref|NM_001064225.1| Oryza sativa (japonica cultivar-group) Os06g0495500 (Os06g0495500) mRNA, complete cds Length = 1721 Score = 46.1 bits (23), Expect = 0.43 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 270 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 308
>ref|NM_101039.2| Arabidopsis thaliana antiporter/ drug transporter/ transporter (AT1G11670) mRNA, complete cds Length = 1944 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttga 872 ||||||||||||||||||||||| Sbjct: 938 tccgccgtcatgctctgccttga 960
>ref|XM_863994.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 2 (CTSD), mRNA Length = 1907 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 gccgctgctgctcgccctcggcc 496 ||||||||||||||||||||||| Sbjct: 67 gccgctgctgctcgccctcggcc 89
>ref|XM_609913.2| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 1 (CTSD), mRNA Length = 1901 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 gccgctgctgctcgccctcggcc 496 ||||||||||||||||||||||| Sbjct: 67 gccgctgctgctcgccctcggcc 89
>ref|XM_871709.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 5 (CTSD), mRNA Length = 1919 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 gccgctgctgctcgccctcggcc 496 ||||||||||||||||||||||| Sbjct: 67 gccgctgctgctcgccctcggcc 89
>ref|XM_871611.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 4 (CTSD), mRNA Length = 1910 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 gccgctgctgctcgccctcggcc 496 ||||||||||||||||||||||| Sbjct: 67 gccgctgctgctcgccctcggcc 89
>ref|XM_871531.1| PREDICTED: Bos taurus cathepsin D (lysosomal aspartyl protease), transcript variant 3 (CTSD), mRNA Length = 1955 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 474 gccgctgctgctcgccctcggcc 496 ||||||||||||||||||||||| Sbjct: 67 gccgctgctgctcgccctcggcc 89
>gb|BT008917.1| Triticum aestivum clone wpa1c.pk009.o19:fis, full insert mRNA sequence Length = 1977 Score = 46.1 bits (23), Expect = 0.43 Identities = 41/47 (87%) Strand = Plus / Plus Query: 331 ggcatggggagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||||||| ||| ||||||| || || |||||||||| |||||| Sbjct: 422 ggcatggggagtgcggtggagactctatgtgggcaggcgtacggcgc 468
>gb|AY140018.1| Arabidopsis thaliana unknown protein (At1g11670) mRNA, complete cds Length = 1943 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttga 872 ||||||||||||||||||||||| Sbjct: 938 tccgccgtcatgctctgccttga 960
>dbj|AK222116.1| Arabidopsis thaliana mRNA for hypothetical protein, complete cds, clone: RAFL22-92-J11 Length = 1086 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttga 872 ||||||||||||||||||||||| Sbjct: 50 tccgccgtcatgctctgccttga 72
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 46.1 bits (23), Expect = 0.43 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 17048939 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 17048977
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 706 gccgccgtcgcctacgacctctc 728 ||||||||||||||||||||||| Sbjct: 60869 gccgccgtcgcctacgacctctc 60847
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 46.1 bits (23), Expect = 0.43 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 49791 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 49829
>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1323_A06 Length = 95665 Score = 46.1 bits (23), Expect = 0.43 Identities = 26/27 (96%) Strand = Plus / Minus Query: 356 tgtgcgggcaggcgttcggcgccggcc 382 ||||||| ||||||||||||||||||| Sbjct: 40864 tgtgcggccaggcgttcggcgccggcc 40838
>dbj|AK109873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B05, full insert sequence Length = 1721 Score = 46.1 bits (23), Expect = 0.43 Identities = 35/39 (89%) Strand = Plus / Plus Query: 339 gagcgcgctggagacgctgtgcgggcaggcgttcggcgc 377 ||||||| |||| || |||||||| |||||||||||||| Sbjct: 270 gagcgcgttggacaccctgtgcggccaggcgttcggcgc 308
>gb|AC007296.2|F25C20 Arabidopsis thaliana chromosome 1 BAC F25C20 sequence, complete sequence Length = 91566 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Plus Query: 850 tccgccgtcatgctctgccttga 872 ||||||||||||||||||||||| Sbjct: 61058 tccgccgtcatgctctgccttga 61080
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 acgctgtgcgggcaggcgttcgg 374 ||||||||||||||||||||||| Sbjct: 133746 acgctgtgcgggcaggcgttcgg 133724
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 46.1 bits (23), Expect = 0.43 Identities = 23/23 (100%) Strand = Plus / Minus Query: 352 acgctgtgcgggcaggcgttcgg 374 ||||||||||||||||||||||| Sbjct: 126214 acgctgtgcgggcaggcgttcgg 126192
>ref|NM_001066174.1| Oryza sativa (japonica cultivar-group) Os07g0480900 (Os07g0480900) mRNA, complete cds Length = 1415 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1063 gcggtcgtcgtcgtcgtcggcg 1084 |||||||||||||||||||||| Sbjct: 62 gcggtcgtcgtcgtcgtcggcg 83
>ref|NM_001051294.1| Oryza sativa (japonica cultivar-group) Os01g0840300 (Os01g0840300) mRNA, complete cds Length = 942 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1052 cggcgttgcacgcggtcgtcgtcgtcgtcg 1081 |||||||||| |||| |||||||||||||| Sbjct: 478 cggcgttgcatgcggccgtcgtcgtcgtcg 449
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 468 cgccgagccgctgctgctcgcc 489 |||||||||||||||||||||| Sbjct: 4600304 cgccgagccgctgctgctcgcc 4600283
>gb|AY636001.1| Streptomyces nodosus amphotericin biosynthetic gene cluster, partial sequence Length = 5811 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 891 gatcaccgtcctcaccggcgac 912 |||||||||||||||||||||| Sbjct: 910 gatcaccgtcctcaccggcgac 931
>gb|AC126783.33| Medicago truncatula clone mth2-15k17, complete sequence Length = 117437 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Minus Query: 1247 caggggtggccattggaggaggatggcaag 1276 |||||||||||||||| | ||||||||||| Sbjct: 11935 caggggtggccattggggcaggatggcaag 11906
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 697 tccgcgggcgccgccgtcgcct 718 |||||||||||||||||||||| Sbjct: 2453678 tccgcgggcgccgccgtcgcct 2453699
>dbj|AP003241.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0408C03 Length = 141273 Score = 44.1 bits (22), Expect = 1.7 Identities = 28/30 (93%) Strand = Plus / Plus Query: 1052 cggcgttgcacgcggtcgtcgtcgtcgtcg 1081 |||||||||| |||| |||||||||||||| Sbjct: 65074 cggcgttgcatgcggccgtcgtcgtcgtcg 65103
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1063 gcggtcgtcgtcgtcgtcggcg 1084 |||||||||||||||||||||| Sbjct: 111208 gcggtcgtcgtcgtcgtcggcg 111229
>dbj|AK063422.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-C06, full insert sequence Length = 1415 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1063 gcggtcgtcgtcgtcgtcggcg 1084 |||||||||||||||||||||| Sbjct: 62 gcggtcgtcgtcgtcgtcggcg 83
>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome Length = 2153922 Score = 44.1 bits (22), Expect = 1.7 Identities = 22/22 (100%) Strand = Plus / Minus Query: 191 ccatcgccatcgccacgctcag 212 |||||||||||||||||||||| Sbjct: 1396312 ccatcgccatcgccacgctcag 1396291
>gb|DQ890022.1| Chlorella virus FR483, complete genome Length = 321240 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 669 cctcctcgtcaccgtcctcgg 689 ||||||||||||||||||||| Sbjct: 133775 cctcctcgtcaccgtcctcgg 133795
>emb|CT835918.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA018C05, full insert sequence Length = 622 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1064 cggtcgtcgtcgtcgtcggcg 1084 ||||||||||||||||||||| Sbjct: 162 cggtcgtcgtcgtcgtcggcg 182
>emb|CT835670.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA126D11, full insert sequence Length = 1448 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 761 gtcgtcgtcgtcgtcggcgag 741
>dbj|AK234470.1| Sus scrofa mRNA, clone:OVR010068B04, expressed in ovary Length = 1633 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 74 cgaggaaggagggggcgatgg 94 ||||||||||||||||||||| Sbjct: 190 cgaggaaggagggggcgatgg 210
>ref|NM_001067603.1| Oryza sativa (japonica cultivar-group) Os08g0163800 (Os08g0163800) mRNA, complete cds Length = 1650 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 893 ggtcgtcgtcgtcgtcggcga 873
>ref|NM_001067403.1| Oryza sativa (japonica cultivar-group) Os08g0118500 (Os08g0118500) mRNA, complete cds Length = 330 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1064 cggtcgtcgtcgtcgtcggcg 1084 ||||||||||||||||||||| Sbjct: 52 cggtcgtcgtcgtcgtcggcg 72
>ref|NM_001066655.1| Oryza sativa (japonica cultivar-group) Os07g0584500 (Os07g0584500) mRNA, complete cds Length = 2468 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1063 gcggtcgtcgtcgtcgtcggc 1083 ||||||||||||||||||||| Sbjct: 431 gcggtcgtcgtcgtcgtcggc 411
>ref|NM_001049585.1| Oryza sativa (japonica cultivar-group) Os01g0369300 (Os01g0369300) mRNA, partial cds Length = 2159 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 17 caccttcctcctcgtcaccgtcctc 41
>tpg|BK001015.1| TPA_exp: Oryza sativa (japonica cultivar-group) isolate P0410E03.4 PDR1 ABC transporter (pdr1) gene, complete cds Length = 8375 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1062 cgcggtcgtcgtcgtcgtcggcgag 1086 |||||||||||||||||||| |||| Sbjct: 110 cgcggtcgtcgtcgtcgtcgtcgag 134
>gb|AE004091.2| Pseudomonas aeruginosa PAO1, complete genome Length = 6264404 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 375 cgccggccaggtggccatgctcggc 399 |||||||| |||||||||||||||| Sbjct: 5152575 cgccggcctggtggccatgctcggc 5152551
>gb|DQ773301.1| Synthetic construct Vibrio cholerae clone FLH200595.01F acnB gene, complete sequence Length = 2598 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1624 tatcaaacatcaacagggtatgaga 1648 ||||||||||||| ||||||||||| Sbjct: 382 tatcaaacatcaagagggtatgaga 358
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 509 tcgcgcgcgaggccgcccgcttcgcgctc 537 |||||||||||| ||||||||||||||| Sbjct: 8411535 tcgcgcgcgaggaggcccgcttcgcgctc 8411507
>gb|AC099707.14| Mus musculus chromosome 1, clone RP23-329C7, complete sequence Length = 204557 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1494 caccgaagcaaccaaacctct 1514 ||||||||||||||||||||| Sbjct: 32713 caccgaagcaaccaaacctct 32733
>gb|AC169813.2| Rhesus Macaque BAC CH250-16M3 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 168861 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1439 cagactggaacacagaggctg 1459 ||||||||||||||||||||| Sbjct: 29063 cagactggaacacagaggctg 29043
>gb|AC004622.1| Homo sapiens chromosome 5, PAC clone 170m10 (LBNL H89), complete sequence Length = 85181 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1522 gagaattagatcacataagca 1542 ||||||||||||||||||||| Sbjct: 19732 gagaattagatcacataagca 19752
>gb|AC148235.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone P0036H01, complete sequence Length = 182504 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 586 aagttcctccaggcgcagagcaagg 610 |||||||||||| |||||||||||| Sbjct: 15948 aagttcctccagccgcagagcaagg 15924
>gb|AC146546.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0062M03 map near S6115, complete sequence Length = 138223 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 aagttcctccaggcgcagagcaagg 610 |||||||||||| |||||||||||| Sbjct: 8742 aagttcctccagccgcagagcaagg 8766
>gb|AC148759.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0030K09, complete sequence Length = 143355 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 51530 gtcgtcgtcgtcgtcggcgag 51550
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 620 tcgcctggatcggcgtcggcg 640 ||||||||||||||||||||| Sbjct: 2012724 tcgcctggatcggcgtcggcg 2012744
>gb|AC137745.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0041J18, complete sequence Length = 129523 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 118391 gtcgtcgtcgtcgtcggcgag 118411
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tcgcctggatcggcgtcggcg 640 ||||||||||||||||||||| Sbjct: 1419487 tcgcctggatcggcgtcggcg 1419467
>gb|AE004145.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 53 of 251 of the complete chromosome Length = 10372 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1624 tatcaaacatcaacagggtatgaga 1648 ||||||||||||| ||||||||||| Sbjct: 8049 tatcaaacatcaagagggtatgaga 8025
>dbj|AB232122.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete cds, isolate:OU2-5 Length = 2685 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 669 cctcctcgtcaccgtcctcgg 689 ||||||||||||||||||||| Sbjct: 193 cctcctcgtcaccgtcctcgg 173
>dbj|AB232120.1| Cercopithecine herpesvirus 16 UL27 gene for glycoprotein B, complete cds, isolate:A951 Length = 2685 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 669 cctcctcgtcaccgtcctcgg 689 ||||||||||||||||||||| Sbjct: 193 cctcctcgtcaccgtcctcgg 173
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 552 cgccttctccttcgccgtcaacttc 576 ||||||||||| ||||||||||||| Sbjct: 1953522 cgccttctcctgcgccgtcaacttc 1953546
>ref|NM_064445.2| Caenorhabditis elegans Y48E1B.2b (Y48E1B.2) mRNA, complete cds Length = 1448 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1080 cggcgagtcgttgctcattgg 1100 ||||||||||||||||||||| Sbjct: 875 cggcgagtcgttgctcattgg 895
>ref|NM_064444.2| Caenorhabditis elegans Y48E1B.2a (Y48E1B.2) mRNA, complete cds Length = 2746 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1080 cggcgagtcgttgctcattgg 1100 ||||||||||||||||||||| Sbjct: 2100 cggcgagtcgttgctcattgg 2120
>emb|Z93393.2| Caenorhabditis elegans YAC Y48E1B, complete sequence Length = 84705 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1080 cggcgagtcgttgctcattgg 1100 ||||||||||||||||||||| Sbjct: 11118 cggcgagtcgttgctcattgg 11098
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 476 cgctgctgctcgccctcggccagga 500 |||||||||||||||||||| |||| Sbjct: 1150996 cgctgctgctcgccctcggcgagga 1151020
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 75698 ggtcgtcgtcgtcgtcggcga 75718
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 1733674 gtcgtcgtcgtcgtcggcgag 1733654
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 586 aagttcctccaggcgcagagcaagg 610 |||||||||||| |||||||||||| Sbjct: 12152066 aagttcctccagccgcagagcaagg 12152090
>dbj|AB014984.1| Bacterium PC3 gyrB gene for DNA gyrase subunit B, partial cds, clone:gy10390.icb Length = 1422 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 499 gacgccaccgtcgcgcgcgaggccgcccg 527 |||||| ||| |||||||||||||||||| Sbjct: 1072 gacgccgccgccgcgcgcgaggccgcccg 1100
>gb|AC008497.7| Homo sapiens chromosome 5 clone CTC-432M15, complete sequence Length = 132119 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1522 gagaattagatcacataagca 1542 ||||||||||||||||||||| Sbjct: 42569 gagaattagatcacataagca 42549
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0410E03 Length = 164839 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1062 cgcggtcgtcgtcgtcgtcggcgag 1086 |||||||||||||||||||| |||| Sbjct: 27742 cgcggtcgtcgtcgtcgtcgtcgag 27718
>gb|AC011806.1|AC011806 Genomic Sequence For Oryza sativa Clone 10P20, Lemont Strain, Complete Sequence, complete sequence Length = 105198 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 90513 caccttcctcctcgtcaccgtcctc 90489
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 cggcacgcccatcgccatcgc 203 ||||||||||||||||||||| Sbjct: 2520217 cggcacgcccatcgccatcgc 2520197
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 469 gccgagccgctgctgctcgcc 489 ||||||||||||||||||||| Sbjct: 193433 gccgagccgctgctgctcgcc 193453
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tcgcctggatcggcgtcggcg 640 ||||||||||||||||||||| Sbjct: 1291481 tcgcctggatcggcgtcggcg 1291461
>dbj|AP005847.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ9990_A01 Length = 101684 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 66269 ggtcgtcgtcgtcgtcggcga 66249
>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1449_C01 Length = 192857 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 7989 ggtcgtcgtcgtcgtcggcga 7969
>dbj|AP003236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0043B10 Length = 167399 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 108815 caccttcctcctcgtcaccgtcctc 108791
>dbj|AP003281.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0560B06 Length = 161720 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 152901 caccttcctcctcgtcaccgtcctc 152877
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1063 gcggtcgtcgtcgtcgtcggc 1083 ||||||||||||||||||||| Sbjct: 103446 gcggtcgtcgtcgtcgtcggc 103426
>gb|AY204469.1| Myxococcus xanthus clone C1213 putative histidine kinase, sensor protein, MsrA-like protein, adventurous gliding motility protein R (aglR), adventurous gliding motility protein S (aglS), putative membrane protein, histidine kinase, hypothetical proteins, and NH3-dependent NAD+ synthetase genes, complete cds Length = 20250 Score = 42.1 bits (21), Expect = 6.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 509 tcgcgcgcgaggccgcccgcttcgcgctc 537 |||||||||||| ||||||||||||||| Sbjct: 10498 tcgcgcgcgaggaggcccgcttcgcgctc 10526
>dbj|AP003925.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1005_B05 Length = 144799 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1064 cggtcgtcgtcgtcgtcggcg 1084 ||||||||||||||||||||| Sbjct: 61909 cggtcgtcgtcgtcgtcggcg 61929
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 107306 ggtcgtcgtcgtcgtcggcga 107326
>dbj|AK109760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-G08, full insert sequence Length = 1898 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 608 caccttcctcctcgtcaccgtcctc 632
>dbj|AK107012.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-F04, full insert sequence Length = 1649 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 893 ggtcgtcgtcgtcgtcggcga 873
>dbj|AK100340.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081N10, full insert sequence Length = 2159 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 17 caccttcctcctcgtcaccgtcctc 41
>dbj|AK067725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116G21, full insert sequence Length = 2469 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1063 gcggtcgtcgtcgtcgtcggc 1083 ||||||||||||||||||||| Sbjct: 432 gcggtcgtcgtcgtcgtcggc 412
>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_B12 Length = 121362 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1065 ggtcgtcgtcgtcgtcggcga 1085 ||||||||||||||||||||| Sbjct: 13103 ggtcgtcgtcgtcgtcggcga 13123
>emb|AJ427974.1|OSA427974 Oryza sativa HAK3 gene for putative potasium transporter, exons 1-6 Length = 3777 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 663 cacctacctcctcgtcaccgtcctc 687 ||||| ||||||||||||||||||| Sbjct: 926 caccttcctcctcgtcaccgtcctc 950
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 620 tcgcctggatcggcgtcggcg 640 ||||||||||||||||||||| Sbjct: 1113481 tcgcctggatcggcgtcggcg 1113461
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1061 acgcggtcgtcgtcgtcgtcg 1081 ||||||||||||||||||||| Sbjct: 4037434 acgcggtcgtcgtcgtcgtcg 4037454
>emb|AJ535045.1|OSA535045 Oryza sativa (japonica cultivar-group) pdr10 gene for PDR-like ABC transporter, exons 1-21 Length = 8375 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1062 cgcggtcgtcgtcgtcgtcggcgag 1086 |||||||||||||||||||| |||| Sbjct: 110 cgcggtcgtcgtcgtcgtcgtcgag 134
>emb|Z27078.4|CEK04H4 Caenorhabditis elegans Cosmid K04H4, complete sequence Length = 33929 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 292 ctctccgtcttcgccaccttc 312 ||||||||||||||||||||| Sbjct: 19862 ctctccgtcttcgccaccttc 19842
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 106810 gtcgtcgtcgtcgtcggcgag 106830
>emb|BX000504.2|CNS08CDU Oryza sativa chromosome 12, . BAC OJ1239_F07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 104307 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1066 gtcgtcgtcgtcgtcggcgag 1086 ||||||||||||||||||||| Sbjct: 33247 gtcgtcgtcgtcgtcggcgag 33267
>gb|U57969.1|PAU57969 Pseudomonas aeruginosa membrane fusion protein MexC (mexC), RND family exporter MexD (mexD), and outer membrane protein OprJ (oprJ) genes, complete cds Length = 6104 Score = 42.1 bits (21), Expect = 6.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 375 cgccggccaggtggccatgctcggc 399 |||||||| |||||||||||||||| Sbjct: 3120 cgccggcctggtggccatgctcggc 3144
>gb|AC169807.2| Rhesus Macaque CHR4 BAC CH250-23P16 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 172055 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1439 cagactggaacacagaggctg 1459 ||||||||||||||||||||| Sbjct: 6353 cagactggaacacagaggctg 6373
>gb|U14662.1|BHU14662 Baboon herpesvirus HVP2 gB glycoprotein (UL27) gene, complete cds Length = 2817 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 669 cctcctcgtcaccgtcctcgg 689 ||||||||||||||||||||| Sbjct: 316 cctcctcgtcaccgtcctcgg 296
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 705 cgccgccgtcgcctacgacct 725 ||||||||||||||||||||| Sbjct: 2126326 cgccgccgtcgcctacgacct 2126346
>dbj|AB029444.1| Leishmania mexicana amazonensis de novo pyrimidine biosynthesis gene cluster (pyr1, pyr3, Histone H3.1, Histone H3.2, pyr6-5, pyr2, pyr4 genes), complete cds Length = 26928 Score = 42.1 bits (21), Expect = 6.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1061 acgcggtcgtcgtcgtcgtcg 1081 ||||||||||||||||||||| Sbjct: 14637 acgcggtcgtcgtcgtcgtcg 14657 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 247,158,652 Number of extensions: 13176139 Number of successful extensions: 320410 Number of sequences better than 10.0: 172 Number of HSP's gapped: 320393 Number of HSP's successfully gapped: 270 Length of query: 1778 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1755 Effective length of database: 18,503,978,556 Effective search space: 32474482365780 Effective search space used: 32474482365780 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
