ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9e10 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_001073230.1| Oryza sativa (japonica cultivar-group) Os12g0441300 (Os12g0441300) mRNA, complete cds Length = 1080 Score = 139 bits (70), Expect = 3e-29 Identities = 181/218 (83%) Strand = Plus / Plus Query: 647 aagtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtg 706 |||||||||||||||||||||| ||| ||| | ||| |||||| ||||||||| |||| Sbjct: 661 aagtgcagcgtgatggacctcgcccacgtcgtcgccaaggctcccggtggcaccggcgtg 720 Query: 707 cagtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaag 766 ||||||| || ||||||||||| |||||||||||||||||| | | ||||||||| ||| Sbjct: 721 gagtacatcgccggcgacatgttcgagagcattccaccggcaaacgctgtcttcctcaag 780 Query: 767 tggattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaataaa 826 |||||||||||||| ||| | || || || || |||| ||||||| ||| ||| ||| Sbjct: 781 tggattatgcatgactggggtgatgacgaatgtgtcaaggtactaaagaatgccaaaaaa 840 Query: 827 gctatcgctccaaaagatgctggcggaaaggtgataat 864 |||||| | | || |||||||| |||||||||||||| Sbjct: 841 gctatcccctctaaggatgctggaggaaaggtgataat 878 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccct 138 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 110 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccct 161 Score = 65.9 bits (33), Expect = 4e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| || || Sbjct: 184 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcaccctcacc 243 Query: 221 ggcgtcttc 229 ||||||||| Sbjct: 244 ggcgtcttc 252 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Plus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||| ||||| ||||||| ||||| ||||||||| | |||||||||||| Sbjct: 949 tacatgatgcttatcaatggtgtcgagcgagatgagaaagagtggaagaag 999
>ref|NM_001062574.1| Oryza sativa (japonica cultivar-group) Os05g0515500 (Os05g0515500) mRNA, complete cds Length = 1354 Score = 129 bits (65), Expect = 3e-26 Identities = 269/337 (79%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 700 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 759 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaagtg 768 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| ||||| Sbjct: 760 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcctcaagtg 819 Query: 769 gattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaataaagc 828 | || | ||||| ||| |||| || || |||||||| ||| |||| || ||||| ||||| Sbjct: 820 ggttctacatgactggggcgatgacgattgcatcaagatattaaagaactgcaagaaagc 879 Query: 829 tatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggttggtggagg 888 |||| |||| | ||| || |||||||||||||| | || || ||||| || | ||| Sbjct: 880 tatccctcctagagacaaaggaggaaaggtgataatcatggatatagtggtcggagcagg 939 Query: 889 cccgcaagacctgaagcacaaagagacacaagtcttgttcgatctttacatcatgctcct 948 ||| |||| |||||||| ||| ||||| ||||||||| | ||||||||| || | Sbjct: 940 accgtctgaccagaagcacagggaggtacaagcgttgttcgatatgtacatcatgttcgt 999 Query: 949 caatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||||| | ||| |||||||||| |||||||||||| Sbjct: 1000 caatggcattgaaagagatgagcaagagtggaagaag 1036 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 209 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 268 Query: 224 gtcttc 229 |||||| Sbjct: 269 gtcttc 274
>dbj|AK068905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002G03, full insert sequence Length = 1357 Score = 129 bits (65), Expect = 3e-26 Identities = 269/337 (79%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 701 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 760 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaagtg 768 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| ||||| Sbjct: 761 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcctcaagtg 820 Query: 769 gattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaataaagc 828 | || | ||||| ||| |||| || || |||||||| ||| |||| || ||||| ||||| Sbjct: 821 ggttctacatgactggggcgatgacgattgcatcaagatattaaagaactgcaagaaagc 880 Query: 829 tatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggttggtggagg 888 |||| |||| | ||| || |||||||||||||| | || || ||||| || | ||| Sbjct: 881 tatccctcctagagacaaaggaggaaaggtgataatcatggatatagtggtcggagcagg 940 Query: 889 cccgcaagacctgaagcacaaagagacacaagtcttgttcgatctttacatcatgctcct 948 ||| |||| |||||||| ||| ||||| ||||||||| | ||||||||| || | Sbjct: 941 accgtctgaccagaagcacagggaggtacaagcgttgttcgatatgtacatcatgttcgt 1000 Query: 949 caatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||||| | ||| |||||||||| |||||||||||| Sbjct: 1001 caatggcattgaaagagatgagcaagagtggaagaag 1037 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 210 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 269 Query: 224 gtcttc 229 |||||| Sbjct: 270 gtcttc 275
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12 Length = 27566993 Score = 103 bits (52), Expect = 2e-18 Identities = 100/116 (86%) Strand = Plus / Minus Query: 647 aagtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtg 706 |||||||||||||||||||||| ||| ||| | ||| |||||| ||||||||| |||| Sbjct: 14760110 aagtgcagcgtgatggacctcgcccacgtcgtcgccaaggctcccggtggcaccggcgtg 14760051 Query: 707 cagtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 ||||||| || ||||||||||| |||||||||||||||||| | | ||||||||| Sbjct: 14760050 gagtacatcgccggcgacatgttcgagagcattccaccggcaaacgctgtcttcct 14759995 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccctctccca 144 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 15050614 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccctgtccca 15050671 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Minus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccct 138 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 14760661 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccct 14760610 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Minus Query: 85 cttggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 14796434 cttggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 14796387 Score = 75.8 bits (38), Expect = 4e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 15019425 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 15019470 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||| Sbjct: 14796358 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcactctctct 14796299 Query: 221 ggcgtcttcagcgtccagcagcc 243 ||| ||||| ||||||| |||| Sbjct: 14796298 ggcatcttcgccgtccagaagcc 14796276 Score = 65.9 bits (33), Expect = 4e-07 Identities = 60/69 (86%) Strand = Plus / Minus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| || || Sbjct: 14760587 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcaccctcacc 14760528 Query: 221 ggcgtcttc 229 ||||||||| Sbjct: 14760527 ggcgtcttc 14760519 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 ||||||||||||||||| | |||||||| ||||| ||||| ||||||||| |||||| Sbjct: 15019500 cgctccacccgtccaaggttccatgcctgcgtcgcctcatgcgcgtgctcactctctccg 15019559 Query: 222 gcgtcttcagcgtccag 238 |||||||| ||||||| Sbjct: 15019560 gcgtcttcgccgtccag 15019576 Score = 65.9 bits (33), Expect = 4e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 650 tgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgcag 709 ||||||||||||||||||| ||| ||| | |||| |||||| ||||||||| || || Sbjct: 15019997 tgcagcgtgatggacctcgcccacgtcgtcgccgaggctcccggtggcaccggtgtcgag 15020056 Query: 710 tacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 | ||| | ||||||||||||||||| ||||||||||| | | ||||||||| Sbjct: 15020057 ttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcct 15020109 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 |||| ||||||||||||||| |||||||||||||| ||||| |||||||| || ||| Sbjct: 15050692 cgctgcacccgtccaagatcccgtgcctgcgccgcctgatgcgcgtgctcaccctcaccg 15050751 Query: 222 gcgtcttc 229 |||||||| Sbjct: 15050752 gcgtcttc 15050759 Score = 61.9 bits (31), Expect = 5e-06 Identities = 94/115 (81%) Strand = Plus / Plus Query: 765 agtggattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaata 824 |||||||||||||||| ||| |||| ||||| || |||| |||||||| || ||||| | Sbjct: 15055441 agtggattatgcatgactggggcgatgatgaatgtgtcaagatactaaagaactgcaaga 15055500 Query: 825 aagctatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggt 879 |||| || | | | ||||||||| |||||||| ||| | |||||||||||||| Sbjct: 15055501 aagccattccatctagagatgctggaggaaaggtaatagtcgtagacatggtggt 15055555 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Minus Query: 765 agtggattatgcatgattggagcgacgatgactg 798 |||||||||||||||||||||| ||| ||||||| Sbjct: 14795193 agtggattatgcatgattggagtgacaatgactg 14795160 Score = 50.1 bits (25), Expect = 0.021 Identities = 34/37 (91%) Strand = Plus / Minus Query: 948 tcaatggcgtcgaacgagatgagcaggagtggaagaa 984 |||||||||| || |||||||| |||||||||||||| Sbjct: 14795010 tcaatggcgttgagcgagatgaacaggagtggaagaa 14794974 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Minus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||| ||||| ||||||| ||||| ||||||||| | |||||||||||| Sbjct: 14758584 tacatgatgcttatcaatggtgtcgagcgagatgagaaagagtggaagaag 14758534 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Plus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||||||||| ||||||| || || ||||| ||||| |||||||||||| Sbjct: 15055611 tacatcatgcttatcaatggtgtggagcgagacgagcaagagtggaagaag 15055661
>emb|AL928751.2|CNS08CBO Oryza sativa chromosome 12, . BAC OSJNBa0037B01 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 133207 Score = 103 bits (52), Expect = 2e-18 Identities = 100/116 (86%) Strand = Plus / Plus Query: 647 aagtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtg 706 |||||||||||||||||||||| ||| ||| | ||| |||||| ||||||||| |||| Sbjct: 58690 aagtgcagcgtgatggacctcgcccacgtcgtcgccaaggctcccggtggcaccggcgtg 58749 Query: 707 cagtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 ||||||| || ||||||||||| |||||||||||||||||| | | ||||||||| Sbjct: 58750 gagtacatcgccggcgacatgttcgagagcattccaccggcaaacgctgtcttcct 58805 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 85 cttggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 22366 cttggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 22413 Score = 79.8 bits (40), Expect = 2e-11 Identities = 49/52 (94%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccct 138 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| Sbjct: 58139 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccct 58190 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||| Sbjct: 22442 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcactctctct 22501 Query: 221 ggcgtcttcagcgtccagcagcc 243 ||| ||||| ||||||| |||| Sbjct: 22502 ggcatcttcgccgtccagaagcc 22524 Score = 65.9 bits (33), Expect = 4e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| |||||||| || || Sbjct: 58213 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcaccctcacc 58272 Query: 221 ggcgtcttc 229 ||||||||| Sbjct: 58273 ggcgtcttc 58281 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 765 agtggattatgcatgattggagcgacgatgactg 798 |||||||||||||||||||||| ||| ||||||| Sbjct: 23607 agtggattatgcatgattggagtgacaatgactg 23640 Score = 50.1 bits (25), Expect = 0.021 Identities = 34/37 (91%) Strand = Plus / Plus Query: 948 tcaatggcgtcgaacgagatgagcaggagtggaagaa 984 |||||||||| || |||||||| |||||||||||||| Sbjct: 23790 tcaatggcgttgagcgagatgaacaggagtggaagaa 23826 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Plus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||| ||||| ||||||| ||||| ||||||||| | |||||||||||| Sbjct: 60216 tacatgatgcttatcaatggtgtcgagcgagatgagaaagagtggaagaag 60266
>ref|NM_001062575.1| Oryza sativa (japonica cultivar-group) Os05g0515600 (Os05g0515600) mRNA, complete cds Length = 1113 Score = 89.7 bits (45), Expect = 2e-14 Identities = 117/141 (82%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 696 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 755 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaagtg 768 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| ||||| Sbjct: 756 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcctcaagtg 815 Query: 769 gattatgcatgattggagcga 789 | || | ||||||||| |||| Sbjct: 816 ggttctacatgattggggcga 836 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 205 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 264 Query: 224 gtcttc 229 |||||| Sbjct: 265 gtcttc 270 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Plus Query: 89 gacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 ||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 130 gacctcggcatcgccgacgccgtccaccgccatggcggcgccgc 173 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| | |||||||| ||||| |||||||||| ||||||||| Sbjct: 970 ttgttcgatatgtacatcatgttggtcaatggcatcgaaagagatgagcaagagtggaag 1029 Query: 983 aag 985 ||| Sbjct: 1030 aag 1032 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 14 ttgctcgatgctcagctcgagctct 38 ||||| ||||||||||||||||||| Sbjct: 55 ttgctggatgctcagctcgagctct 79
>gb|AY111551.1| Zea mays CL10273_1 mRNA sequence Length = 505 Score = 85.7 bits (43), Expect = 4e-13 Identities = 142/175 (81%) Strand = Plus / Minus Query: 708 agtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaagt 767 |||| ||||| ||| |||||||||||||||||||||||||||| | |||||||| |||| Sbjct: 484 agtatattgctggccacatgtttgagagcattccaccggcagacgccgtcttccttaagt 425 Query: 768 ggattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaataaag 827 || || ||||||| ||| |||| | ||| || ||||| ||||| || || || || |||| Sbjct: 424 gggttttgcatgactggggcgatgctgattgtatcaagatactcaagaactgtaagaaag 365 Query: 828 ctatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggttgg 882 |||| || | | ||||| || |||||||||||||| || || ||||| ||||| Sbjct: 364 ctataccttccagggatgcaggaggaaaggtgataatcgttgatatggttgttgg 310
>ref|NM_001073243.1| Oryza sativa (japonica cultivar-group) Os12g0445200 (Os12g0445200) mRNA, complete cds Length = 714 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccctctccca 144 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 2 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccctgtccca 59 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Plus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 |||| ||||||||||||||| |||||||||||||| ||||| |||||||| || ||| Sbjct: 80 cgctgcacccgtccaagatcccgtgcctgcgccgcctgatgcgcgtgctcaccctcaccg 139 Query: 222 gcgtcttc 229 |||||||| Sbjct: 140 gcgtcttc 147
>emb|AL731873.5|CNS08C8D Oryza sativa chromosome 12, . BAC OSJNBa0068D20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 174521 Score = 83.8 bits (42), Expect = 1e-12 Identities = 54/58 (93%) Strand = Plus / Minus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgctaccctctccca 144 |||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||| Sbjct: 31233 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgccaccctgtccca 31176 Score = 75.8 bits (38), Expect = 4e-10 Identities = 44/46 (95%) Strand = Plus / Minus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 62422 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 62377 Score = 65.9 bits (33), Expect = 4e-07 Identities = 93/113 (82%) Strand = Plus / Minus Query: 650 tgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgcag 709 ||||||||||||||||||| ||| ||| | |||| |||||| ||||||||| || || Sbjct: 61850 tgcagcgtgatggacctcgcccacgtcgtcgccgaggctcccggtggcaccggtgtcgag 61791 Query: 710 tacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 | ||| | ||||||||||||||||| ||||||||||| | | ||||||||| Sbjct: 61790 ttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcct 61738 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 ||||||||||||||||| | |||||||| ||||| ||||| ||||||||| |||||| Sbjct: 62347 cgctccacccgtccaaggttccatgcctgcgtcgcctcatgcgcgtgctcactctctccg 62288 Query: 222 gcgtcttcagcgtccag 238 |||||||| ||||||| Sbjct: 62287 gcgtcttcgccgtccag 62271 Score = 63.9 bits (32), Expect = 1e-06 Identities = 59/68 (86%) Strand = Plus / Minus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 |||| ||||||||||||||| |||||||||||||| ||||| |||||||| || ||| Sbjct: 31155 cgctgcacccgtccaagatcccgtgcctgcgccgcctgatgcgcgtgctcaccctcaccg 31096 Query: 222 gcgtcttc 229 |||||||| Sbjct: 31095 gcgtcttc 31088 Score = 61.9 bits (31), Expect = 5e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 765 agtggattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaata 824 |||||||||||||||| ||| |||| ||||| || |||| |||||||| || ||||| | Sbjct: 26406 agtggattatgcatgactggggcgatgatgaatgtgtcaagatactaaagaactgcaaga 26347 Query: 825 aagctatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggt 879 |||| || | | | ||||||||| |||||||| ||| | |||||||||||||| Sbjct: 26346 aagccattccatctagagatgctggaggaaaggtaatagtcgtagacatggtggt 26292 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Minus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||||||||| ||||||| || || ||||| ||||| |||||||||||| Sbjct: 26236 tacatcatgcttatcaatggtgtggagcgagacgagcaagagtggaagaag 26186
>ref|NM_001073231.1| Oryza sativa (japonica cultivar-group) Os12g0441600 (Os12g0441600) mRNA, complete cds Length = 1266 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 85 cttggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 111 cttggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 158 Score = 79.8 bits (40), Expect = 2e-11 Identities = 70/80 (87%) Strand = Plus / Plus Query: 719 ggcgacatgtttgagagcattccaccggcagatgttgtcttcctaaagtggattatgcat 778 |||||||||||||| || |||||| | || ||| ||||||||| ||||||||||||||| Sbjct: 748 ggcgacatgtttgacagtattccagcagccaatgctgtcttcctcaagtggattatgcat 807 Query: 779 gattggagcgacgatgactg 798 |||||||| ||| ||||||| Sbjct: 808 gattggagtgacaatgactg 827 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||| Sbjct: 187 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcactctctct 246 Query: 221 ggcgtcttcagcgtccagcagcc 243 ||| ||||| ||||||| |||| Sbjct: 247 ggcatcttcgccgtccagaagcc 269 Score = 50.1 bits (25), Expect = 0.021 Identities = 34/37 (91%) Strand = Plus / Plus Query: 948 tcaatggcgtcgaacgagatgagcaggagtggaagaa 984 |||||||||| || |||||||| |||||||||||||| Sbjct: 977 tcaatggcgttgagcgagatgaacaggagtggaagaa 1013
>emb|AL772417.3|CNS08C9V Oryza sativa chromosome 12, . BAC OSJNBa0041M09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146519 Score = 79.8 bits (40), Expect = 2e-11 Identities = 46/48 (95%) Strand = Plus / Plus Query: 85 cttggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 123452 cttggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 123499 Score = 69.9 bits (35), Expect = 2e-08 Identities = 71/83 (85%) Strand = Plus / Plus Query: 161 acgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctcc 220 ||||||||||| ||||||||| |||||||||||||| ||||| ||||||||| |||| Sbjct: 123528 acgctccacccctccaagatcccgtgcctgcgccgcctcatgcgcgtgctcactctctct 123587 Query: 221 ggcgtcttcagcgtccagcagcc 243 ||| ||||| ||||||| |||| Sbjct: 123588 ggcatcttcgccgtccagaagcc 123610 Score = 52.0 bits (26), Expect = 0.005 Identities = 32/34 (94%) Strand = Plus / Plus Query: 765 agtggattatgcatgattggagcgacgatgactg 798 |||||||||||||||||||||| ||| ||||||| Sbjct: 124693 agtggattatgcatgattggagtgacaatgactg 124726 Score = 50.1 bits (25), Expect = 0.021 Identities = 34/37 (91%) Strand = Plus / Plus Query: 948 tcaatggcgtcgaacgagatgagcaggagtggaagaa 984 |||||||||| || |||||||| |||||||||||||| Sbjct: 124876 tcaatggcgttgagcgagatgaacaggagtggaagaa 124912
>gb|L14063.1|MZEOMT Zea mays O-methyltransferase mRNA, complete cds Length = 1268 Score = 79.8 bits (40), Expect = 2e-11 Identities = 271/348 (77%) Strand = Plus / Plus Query: 633 cgttcccgcacatcaagtgcagcgtgatggacctcggccatgtcattgccggggctccta 692 ||||||||||| ||||||| |||||| ||||||| | ||| ||| |||| |||||| | Sbjct: 682 cgttcccgcacgtcaagtgtagcgtgctggaccttgcccacgtcgttgcgaaggctccaa 741 Query: 693 gtggcaccgacgtgcagtacattgcgggcgacatgtttgagagcattccaccggcagatg 752 | ||| |||||||| | || || |||||||||||||||||||||||||| ||||| | Sbjct: 742 ctcacacggacgtgcaatttatcgctggcgacatgtttgagagcattccaccagcagacg 801 Query: 753 ttgtcttcctaaagtggattatgcatgattggagcgacgatgactgcatcaaaatactaa 812 || | | |||| | | ||||||||||| | | || |||||| | || ||||| | Sbjct: 802 ccgtactgttgaagtcggtcttgcatgattgggaccatgacgactgcgtgaagatactga 861 Query: 813 aaaattgcaataaagctatcgctccaaaagatgctggcggaaaggtgataattgtagaca 872 | |||||||| || ||||| |||||| ||| || || |||||||||||||| || ||| Sbjct: 862 agaattgcaaaaaggctattcctccaagagaagccggtggaaaggtgataataataaaca 921 Query: 873 tggtggttggtggaggcccgcaagacctgaagcacaaagagacacaagtcttgttcgatc 932 |||| ||||| | || || ||| ||||||||||||||| || | | | |||||| Sbjct: 922 tggtagttggagctgggccatctgacatgaagcacaaagagatgcaggccatattcgatg 981 Query: 933 tttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtgga 980 | || |||||| || |||||||| | |||||||||||||||||||||| Sbjct: 982 tctatatcatgttcatcaatggcatggaacgagatgagcaggagtgga 1029 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 14 ttgctcgatgctcagctcgagctctggcaca 44 ||||||||||| ||||||||||||||||||| Sbjct: 57 ttgctcgatgcgcagctcgagctctggcaca 87 Score = 52.0 bits (26), Expect = 0.005 Identities = 47/54 (87%) Strand = Plus / Plus Query: 364 catcgtctcctccttctctgaactcggggcctggttccagcacaagctgccaga 417 |||||||||| ||||||| || ||||| || |||||||||||| |||| ||||| Sbjct: 413 catcgtctcccccttctccgagctcggcgcgtggttccagcacgagctcccaga 466 Score = 48.1 bits (24), Expect = 0.082 Identities = 30/32 (93%) Strand = Plus / Plus Query: 101 gccgacgccatccaccaccatggcggtgccgc 132 ||||| |||||||||| ||||||||||||||| Sbjct: 144 gccgatgccatccacctccatggcggtgccgc 175
>ref|NM_001073242.1| Oryza sativa (japonica cultivar-group) Os12g0444800 (Os12g0444800) mRNA, complete cds Length = 1092 Score = 75.8 bits (38), Expect = 4e-10 Identities = 44/46 (95%) Strand = Plus / Plus Query: 87 tggacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 |||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 122 tggacctcggcatcgccgacgccatccaccaccacggcggcgccgc 167 Score = 65.9 bits (33), Expect = 4e-07 Identities = 66/77 (85%) Strand = Plus / Plus Query: 162 cgctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccg 221 ||||||||||||||||| | |||||||| ||||| ||||| ||||||||| |||||| Sbjct: 197 cgctccacccgtccaaggttccatgcctgcgtcgcctcatgcgcgtgctcactctctccg 256 Query: 222 gcgtcttcagcgtccag 238 |||||||| ||||||| Sbjct: 257 gcgtcttcgccgtccag 273 Score = 65.9 bits (33), Expect = 4e-07 Identities = 93/113 (82%) Strand = Plus / Plus Query: 650 tgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgcag 709 ||||||||||||||||||| ||| ||| | |||| |||||| ||||||||| || || Sbjct: 694 tgcagcgtgatggacctcgcccacgtcgtcgccgaggctcccggtggcaccggtgtcgag 753 Query: 710 tacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 | ||| | ||||||||||||||||| ||||||||||| | | ||||||||| Sbjct: 754 ttcatcaccggcgacatgtttgagagtgttccaccggcaaacgctgtcttcct 806
>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06, complete sequence Length = 142068 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 99017 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 99076 Query: 224 gtcttc 229 |||||| Sbjct: 99077 gtcttc 99082 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 99508 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 99567 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 99568 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 99621 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 104453 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 104394 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 104393 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 104340 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 104944 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 104885 Query: 224 gtcttc 229 |||||| Sbjct: 104884 gtcttc 104879 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 ||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 105019 gacctcggcatcgccgacgccgtccaccgccatggcggcgccgc 104976 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| || |||||||| | ||| |||||||||| ||||||||| Sbjct: 100134 ttgttcgatatgtacatcatgttcgtcaatggcattgaaagagatgagcaagagtggaag 100193 Query: 983 aag 985 ||| Sbjct: 100194 aag 100196 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| | |||||||| ||||| |||||||||| ||||||||| Sbjct: 103693 ttgttcgatatgtacatcatgttggtcaatggcatcgaaagagatgagcaagagtggaag 103634 Query: 983 aag 985 ||| Sbjct: 103633 aag 103631 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ttgctcgatgctcagctcgagctct 38 ||||| ||||||||||||||||||| Sbjct: 105094 ttgctggatgctcagctcgagctct 105070
>gb|AC130603.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1130G10, complete sequence Length = 143073 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 4774 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 4833 Query: 224 gtcttc 229 |||||| Sbjct: 4834 gtcttc 4839 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 5265 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 5324 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 5325 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 5378 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 10210 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 10151 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 10150 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 10097 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 10701 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 10642 Query: 224 gtcttc 229 |||||| Sbjct: 10641 gtcttc 10636 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 ||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 10776 gacctcggcatcgccgacgccgtccaccgccatggcggcgccgc 10733 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| || |||||||| | ||| |||||||||| ||||||||| Sbjct: 5891 ttgttcgatatgtacatcatgttcgtcaatggcattgaaagagatgagcaagagtggaag 5950 Query: 983 aag 985 ||| Sbjct: 5951 aag 5953 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| | |||||||| ||||| |||||||||| ||||||||| Sbjct: 9450 ttgttcgatatgtacatcatgttggtcaatggcatcgaaagagatgagcaagagtggaag 9391 Query: 983 aag 985 ||| Sbjct: 9390 aag 9388 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ttgctcgatgctcagctcgagctct 38 ||||| ||||||||||||||||||| Sbjct: 10851 ttgctggatgctcagctcgagctct 10827
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 25364413 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 25364472 Query: 224 gtcttc 229 |||||| Sbjct: 25364473 gtcttc 25364478 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Plus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 25364904 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 25364963 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 25364964 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 25365017 Score = 75.8 bits (38), Expect = 4e-10 Identities = 95/114 (83%) Strand = Plus / Minus Query: 649 gtgcagcgtgatggacctcggccatgtcattgccggggctcctagtggcaccgacgtgca 708 ||||||||||||||||||||| || ||| | ||| |||||| ||||||||||| | Sbjct: 25369849 gtgcagcgtgatggacctcgggcacgtcgtcgccaaggctcccgccggcaccgacgtcga 25369790 Query: 709 gtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtcttcct 762 |||||| || ||||||||||||||||| | ||||||||||| | ||||||||| Sbjct: 25369789 gtacatcgccggcgacatgtttgagagtgtgccaccggcagacgctgtcttcct 25369736 Score = 75.8 bits (38), Expect = 4e-10 Identities = 59/66 (89%) Strand = Plus / Minus Query: 164 ctccacccgtccaagatctgctgcctgcgccgccttatgcgtgtgctcactgtctccggc 223 |||||||||||||||||| |||||| |||||||| ||||| | |||||| ||||||||| Sbjct: 25370340 ctccacccgtccaagatcccctgcctccgccgcctcatgcgcgcgctcaccgtctccggc 25370281 Query: 224 gtcttc 229 |||||| Sbjct: 25370280 gtcttc 25370275 Score = 63.9 bits (32), Expect = 1e-06 Identities = 41/44 (93%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgccatccaccaccatggcggtgccgc 132 ||||||||||||||||||||| |||||| ||||||||| ||||| Sbjct: 25370415 gacctcggcatcgccgacgccgtccaccgccatggcggcgccgc 25370372 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Plus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| || |||||||| | ||| |||||||||| ||||||||| Sbjct: 25365530 ttgttcgatatgtacatcatgttcgtcaatggcattgaaagagatgagcaagagtggaag 25365589 Query: 983 aag 985 ||| Sbjct: 25365590 aag 25365592 Score = 61.9 bits (31), Expect = 5e-06 Identities = 55/63 (87%) Strand = Plus / Minus Query: 923 ttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaag 982 ||||||||| | ||||||||| | |||||||| ||||| |||||||||| ||||||||| Sbjct: 25369089 ttgttcgatatgtacatcatgttggtcaatggcatcgaaagagatgagcaagagtggaag 25369030 Query: 983 aag 985 ||| Sbjct: 25369029 aag 25369027 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 14 ttgctcgatgctcagctcgagctct 38 ||||| ||||||||||||||||||| Sbjct: 25370490 ttgctggatgctcagctcgagctct 25370466
>ref|NM_001070594.1| Oryza sativa (japonica cultivar-group) Os10g0118200 (Os10g0118200) mRNA, complete cds Length = 1480 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 1019 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 1078 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 1079 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 1130 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 909 agatgctgggggaaaggtgataatt 933
>ref|NM_001069466.1| Oryza sativa (japonica cultivar-group) Os09g0344500 (Os09g0344500) mRNA, complete cds Length = 1465 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| || || ||||| || ||||||||||| || ||| ||| ||||| |||| Sbjct: 1015 atggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtg 1074 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| |||||||| ||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1075 actacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttaccc 1126
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 1142386 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 1142327 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 1142326 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 1142275 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 1119318 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 1119259 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 1119258 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 1119207 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 1142496 agatgctgggggaaaggtgataatt 1142472
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10 Length = 22685906 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 1142386 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 1142327 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 1142326 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 1142275 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 1119318 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 1119259 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 1119258 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 1119207 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 1142496 agatgctgggggaaaggtgataatt 1142472
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9 Length = 22696651 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| || || ||||| || ||||||||||| || ||| ||| ||||| |||| Sbjct: 10687942 atggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtg 10687883 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| |||||||| ||| | |||||||| ||||||||||||||| ||||||| Sbjct: 10687882 actacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttaccc 10687831
>gb|AC079179.5| Oryza sativa chromosome 10 clone OSJNBa0079B05, complete sequence Length = 145526 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 26624 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 26565 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 26564 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 26513 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 3556 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 3497 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 3496 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 3445 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 26734 agatgctgggggaaaggtgataatt 26710
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 139839 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 139780 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 139779 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 139728 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 116771 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 116712 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 116711 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 116660 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 139949 agatgctgggggaaaggtgataatt 139925
>dbj|AP005881.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0057I13 Length = 156330 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| || || ||||| || ||||||||||| || ||| ||| ||||| |||| Sbjct: 140254 atggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtg 140195 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| |||||||| ||| | |||||||| ||||||||||||||| ||||||| Sbjct: 140194 actacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttaccc 140143
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Minus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| || || ||||| || ||||||||||| || ||| ||| ||||| |||| Sbjct: 24560 atggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtg 24501 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| |||||||| ||| | |||||||| ||||||||||||||| ||||||| Sbjct: 24500 actacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttaccc 24449
>dbj|AK072740.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134H21, full insert sequence Length = 1466 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| || || ||||| || ||||||||||| || ||| ||| ||||| |||| Sbjct: 1016 atggcatcgagcgggaggagcatgaatggaagaagattttcttggaggctggatttagtg 1075 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| |||||||| ||| | |||||||| ||||||||||||||| ||||||| Sbjct: 1076 actacaaaatcataccggtgctgggtgttcgatcaatcattgaggtttaccc 1127
>dbj|AK069308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012K03, full insert sequence Length = 1483 Score = 71.9 bits (36), Expect = 6e-09 Identities = 93/112 (83%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||| | || ||||||||||| || | | ||| |||||||||| Sbjct: 1022 atggcatcgagcgagaggagtatgaatggaagaagattttcttagaggctggattcagtg 1081 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||||||| | || |||| |||||||||||| ||| ||||||| Sbjct: 1082 actacaaaatcaccccggtgctaggtgcccgatcaatcatcgaggtttaccc 1133 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 841 agatgctggcggaaaggtgataatt 865 ||||||||| ||||||||||||||| Sbjct: 912 agatgctgggggaaaggtgataatt 936
>gb|AY110291.1| Zea mays CL2555_1 mRNA sequence Length = 1319 Score = 67.9 bits (34), Expect = 9e-08 Identities = 97/118 (82%) Strand = Plus / Plus Query: 633 cgttcccgcacatcaagtgcagcgtgatggacctcggccatgtcattgccggggctccta 692 ||||||||||| ||||||| |||||| ||||||| | ||| ||| |||| |||||| | Sbjct: 682 cgttcccgcacgtcaagtgtagcgtgctggaccttgcccacgtcgttgcgaaggctccaa 741 Query: 693 gtggcaccgacgtgcagtacattgcgggcgacatgtttgagagcattccaccggcaga 750 | ||| |||||||| | || || |||||||||||||||||||||||||| ||||| Sbjct: 742 ctcacacggacgtgcaatttatcgctggcgacatgtttgagagcattccaccagcaga 799 Score = 58.0 bits (29), Expect = 9e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 900 tgaagcacaaagagacacaagtcttgttcgatctttacatcatgctcctcaatggcgtcg 959 ||||||||||||||| || | | | |||||| | || |||||| || |||||||| | | Sbjct: 949 tgaagcacaaagagatgcaggccatattcgatgtctatatcatgttcatcaatggcatgg 1008 Query: 960 aacgagatgagcaggagtgga 980 ||||||||||||||||||||| Sbjct: 1009 aacgagatgagcaggagtgga 1029 Score = 54.0 bits (27), Expect = 0.001 Identities = 30/31 (96%) Strand = Plus / Plus Query: 14 ttgctcgatgctcagctcgagctctggcaca 44 ||||||||||| ||||||||||||||||||| Sbjct: 57 ttgctcgatgcgcagctcgagctctggcaca 87 Score = 48.1 bits (24), Expect = 0.082 Identities = 30/32 (93%) Strand = Plus / Plus Query: 101 gccgacgccatccaccaccatggcggtgccgc 132 ||||| |||||||||| ||||||||||||||| Sbjct: 144 gccgatgccatccacctccatggcggtgccgc 175
>ref|NM_001073244.1| Oryza sativa (japonica cultivar-group) Os12g0445300 (Os12g0445300) mRNA, complete cds Length = 384 Score = 60.0 bits (30), Expect = 2e-05 Identities = 93/114 (81%) Strand = Plus / Plus Query: 766 gtggattatgcatgattggagcgacgatgactgcatcaaaatactaaaaaattgcaataa 825 ||||||||||||||| ||| |||| ||||| || |||| |||||||| || ||||| || Sbjct: 84 gtggattatgcatgactggggcgatgatgaatgtgtcaagatactaaagaactgcaagaa 143 Query: 826 agctatcgctccaaaagatgctggcggaaaggtgataattgtagacatggtggt 879 ||| || | | | ||||||||| |||||||| ||| | |||||||||||||| Sbjct: 144 agccattccatctagagatgctggaggaaaggtaatagtcgtagacatggtggt 197 Score = 46.1 bits (23), Expect = 0.33 Identities = 44/51 (86%) Strand = Plus / Plus Query: 935 tacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaagaag 985 ||||||||||| ||||||| || || ||||| ||||| |||||||||||| Sbjct: 253 tacatcatgcttatcaatggtgtggagcgagacgagcaagagtggaagaag 303
>ref|NM_001070593.1| Oryza sativa (japonica cultivar-group) Os10g0118000 (Os10g0118000) mRNA, complete cds Length = 1269 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 888 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 947 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 948 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 999
>dbj|AK069721.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023028O22, full insert sequence Length = 1269 Score = 56.0 bits (28), Expect = 3e-04 Identities = 91/112 (81%) Strand = Plus / Plus Query: 951 atggcgtcgaacgagatgagcaggagtggaagaagataatcatggcggcaggattcagtg 1010 ||||| |||| ||||| ||||| || ||||||||||| || | | ||| |||||||||| Sbjct: 888 atggcatcgagcgagaggagcatgaatggaagaagattttcttagaggctggattcagtg 947 Query: 1011 acttcaaaatcaccccgattctgggtgtccgatcaatcattgagctttaccc 1062 ||| ||||||||| || | || |||| |||||| ||||| ||| ||||||| Sbjct: 948 actacaaaatcacaccagtgctaggtgcccgatcgatcatcgaggtttaccc 999
>ref|NM_001074566.1| Oryza sativa (japonica cultivar-group) Os11g0539500 (Os11g0539500) mRNA, complete cds Length = 1128 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Plus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 |||||| |||||||||||| ||||||||||||| Sbjct: 685 ttcccggacatcaagtgcaccgtgatggacctc 717
>gb|AY389608.1| Hyacinthus orientalis O-methyltransferase mRNA, partial cds Length = 746 Score = 50.1 bits (25), Expect = 0.021 Identities = 28/29 (96%) Strand = Plus / Plus Query: 764 aagtggattatgcatgattggagcgacga 792 ||||||||| ||||||||||||||||||| Sbjct: 292 aagtggattctgcatgattggagcgacga 320
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Minus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 |||||| |||||||||||| ||||||||||||| Sbjct: 133711 ttcccggacatcaagtgcaccgtgatggacctc 133679
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Minus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 |||||| |||||||||||| ||||||||||||| Sbjct: 33331 ttcccggacatcaagtgcaccgtgatggacctc 33299
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 50.1 bits (25), Expect = 0.021 Identities = 31/33 (93%) Strand = Plus / Minus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 |||||| |||||||||||| ||||||||||||| Sbjct: 19030513 ttcccggacatcaagtgcaccgtgatggacctc 19030481 Score = 42.1 bits (21), Expect = 5.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 ||||||||||||||||||| ||| |||||||| Sbjct: 7138341 ttcccgcacatcaagtgcacggtgctggacctc 7138309
>dbj|AB086105.1| Rosa chinensis var. spontanea RcOMT3 mRNA for caffeic acid O-methyltransferase, complete cds Length = 1193 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Plus Query: 764 aagtggattatgcatgattggagcgac 790 |||||||||||||| |||||||||||| Sbjct: 798 aagtggattatgcacgattggagcgac 824
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7 Length = 29644043 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 ctcggcatcgccgacgccatccaccac 118 |||||| |||||||||||||||||||| Sbjct: 16265164 ctcggcgtcgccgacgccatccaccac 16265138 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ctcggcatcgccgacgccatccacc 116 |||||| |||||||||||||||||| Sbjct: 16295807 ctcggcgtcgccgacgccatccacc 16295783
>dbj|AP003916.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1634_H04 Length = 151699 Score = 46.1 bits (23), Expect = 0.33 Identities = 26/27 (96%) Strand = Plus / Minus Query: 92 ctcggcatcgccgacgccatccaccac 118 |||||| |||||||||||||||||||| Sbjct: 85602 ctcggcgtcgccgacgccatccaccac 85576 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ctcggcatcgccgacgccatccacc 116 |||||| |||||||||||||||||| Sbjct: 116245 ctcggcgtcgccgacgccatccacc 116221
>gb|CP000113.1| Myxococcus xanthus DK 1622, complete genome Length = 9139763 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Minus Query: 109 catccaccaccatggcggtgcc 130 |||||||||||||||||||||| Sbjct: 6983763 catccaccaccatggcggtgcc 6983742
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6 Length = 30731886 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataattgtagacatggtggttgg 882 ||||||||| |||||||||||||| || |||| |||||||| Sbjct: 9833345 agatgctggaggaaaggtgataatcataaacatagtggttgg 9833304
>emb|AJ868575.1| Picea abies mRNA for caffeate O-methyltransferase (comt gene) Length = 1423 Score = 44.1 bits (22), Expect = 1.3 Identities = 25/26 (96%) Strand = Plus / Plus Query: 764 aagtggattatgcatgattggagcga 789 ||||||||| |||||||||||||||| Sbjct: 852 aagtggattctgcatgattggagcga 877
>gb|AC160949.1| Oryza sativa (japonica cultivar-group) BAC clone OSJNBb0006E22, complete sequence Length = 128256 Score = 44.1 bits (22), Expect = 1.3 Identities = 46/54 (85%) Strand = Plus / Minus Query: 704 gtgcagtacattgcgggcgacatgtttgagagcattccaccggcagatgttgtc 757 ||||||| ||| || |||||||||||| || ||||||||| ||||||| |||| Sbjct: 82056 gtgcagttcatcgccggcgacatgtttaagtccattccacctgcagatgctgtc 82003 Score = 42.1 bits (21), Expect = 5.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 774 tgcatgattggagcgacgatgactgcatcaaaatact 810 ||||||| ||||| |||||||||||| |||| ||||| Sbjct: 62092 tgcatgactggagtgacgatgactgcgtcaagatact 62056
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataattgtagacatggtggttgg 882 ||||||||| |||||||||||||| || |||| |||||||| Sbjct: 123587 agatgctggaggaaaggtgataatcataaacatagtggttgg 123546
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 1.3 Identities = 37/42 (88%) Strand = Plus / Minus Query: 841 agatgctggcggaaaggtgataattgtagacatggtggttgg 882 ||||||||| |||||||||||||| || |||| |||||||| Sbjct: 29980 agatgctggaggaaaggtgataatcataaacatagtggttgg 29939
>gb|AY107933.1| Zea mays PCO142167 mRNA sequence Length = 710 Score = 44.1 bits (22), Expect = 1.3 Identities = 55/66 (83%) Strand = Plus / Plus Query: 922 cttgttcgatctttacatcatgctcctcaatggcgtcgaacgagatgagcaggagtggaa 981 |||||| ||||| ||||||||| |||| || ||||| |||||||||| |||||||| Sbjct: 439 cttgtttgatctctacatcatgactatcaacggtgtcgagcgagatgagcgagagtggaa 498 Query: 982 gaagat 987 |||||| Sbjct: 499 gaagat 504
>dbj|AB014456.1| Pyrus pyrifolia mRNA for O-methyltransferase, complete cds Length = 1354 Score = 44.1 bits (22), Expect = 1.3 Identities = 22/22 (100%) Strand = Plus / Plus Query: 764 aagtggattatgcatgattgga 785 |||||||||||||||||||||| Sbjct: 863 aagtggattatgcatgattgga 884
>gb|M87340.1|CIPIMT1A Mesembryanthemum crystallinum methyl transferase (Imt1) mRNA, complete cds Length = 1494 Score = 44.1 bits (22), Expect = 1.3 Identities = 58/70 (82%) Strand = Plus / Plus Query: 723 acatgtttgagagcattccaccggcagatgttgtcttcctaaagtggattatgcatgatt 782 |||||||||||||||| |||| ||||||| | ||| | |||||| | ||||||||| Sbjct: 801 acatgtttgagagcataccacaagcagatgccattttcatgaagtgggtgttgcatgatt 860 Query: 783 ggagcgacga 792 |||||||||| Sbjct: 861 ggagcgacga 870
>ref|NM_001074098.1| Oryza sativa (japonica cultivar-group) Os11g0235500 (Os11g0235500) mRNA, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 5.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 ||||||||||||||||||| ||| |||||||| Sbjct: 703 ttcccgcacatcaagtgcacggtgctggacctc 735
>ref|NM_001066120.1| Oryza sativa (japonica cultivar-group) Os07g0464200 (Os07g0464200) mRNA, complete cds Length = 1083 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 ctcggcatcgccgacgccatccacc 116 |||||| |||||||||||||||||| Sbjct: 94 ctcggcgtcgccgacgccatccacc 118
>ref|XR_025618.1| PREDICTED: Pan troglodytes CUB and Sushi multiple domains 1 (CSMD1), mRNA Length = 10197 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 48 cctttggctacgtcaaatcaa 68 ||||||||||||||||||||| Sbjct: 3739 cctttggctacgtcaaatcaa 3759
>ref|XM_001166144.1| PREDICTED: Pan troglodytes specifically androgen-regulated protein, transcript variant 2 (LOC457686), mRNA Length = 5633 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1441 tcagcctgcagctccagccca 1461
>ref|XM_001166109.1| PREDICTED: Pan troglodytes specifically androgen-regulated protein, transcript variant 1 (LOC457686), mRNA Length = 5693 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1501 tcagcctgcagctccagccca 1521
>ref|XM_514154.2| PREDICTED: Pan troglodytes specifically androgen-regulated protein, transcript variant 3 (LOC457686), mRNA Length = 5519 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1327 tcagcctgcagctccagccca 1347
>ref|XM_001083902.1| PREDICTED: Macaca mulatta similar to specifically androgen-regulated protein, transcript variant 2 (LOC693886), mRNA Length = 4026 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1471 tcagcctgcagctccagccca 1491
>ref|XM_001083682.1| PREDICTED: Macaca mulatta similar to specifically androgen-regulated protein, transcript variant 1 (LOC693886), mRNA Length = 2375 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1426 tcagcctgcagctccagccca 1446
>ref|NM_023938.4| Homo sapiens chromosome 1 open reading frame 116 (C1orf116), mRNA Length = 5490 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1423 tcagcctgcagctccagccca 1443
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0097K08 map C827S, complete sequence Length = 137870 Score = 42.1 bits (21), Expect = 5.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 ||||||||||||||||||| ||| |||||||| Sbjct: 44214 ttcccgcacatcaagtgcacggtgctggacctc 44246
>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0026P08 map near C827S, complete sequence Length = 148676 Score = 42.1 bits (21), Expect = 5.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 635 ttcccgcacatcaagtgcagcgtgatggacctc 667 ||||||||||||||||||| ||| |||||||| Sbjct: 51561 ttcccgcacatcaagtgcacggtgctggacctc 51529
>gb|AY352640.1| Homo sapiens specifically androgen-regulated protein (SARG) mRNA, complete cds Length = 5487 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1423 tcagcctgcagctccagccca 1443
>gb|AY431940.1| Aedes aegypti ASAP ID: 34837 conserved unknown mRNA sequence Length = 1171 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1035 gtgtccgatcaatcattgagc 1055 ||||||||||||||||||||| Sbjct: 481 gtgtccgatcaatcattgagc 501
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgcc 109 ||||||||||||||||||||| Sbjct: 835759 gacctcggcatcgccgacgcc 835739
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgcc 109 ||||||||||||||||||||| Sbjct: 1830465 gacctcggcatcgccgacgcc 1830445
>gb|BC018959.2| Homo sapiens chromosome 1 open reading frame 116, mRNA (cDNA clone IMAGE:2823907) Length = 2055 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1089 tcagcctgcagctccagccca 1109
>dbj|AK093826.1| Homo sapiens cDNA FLJ36507 fis, clone TRACH2001101 Length = 2183 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1400 tcagcctgcagctccagccca 1420
>gb|BC000765.2| Homo sapiens chromosome 1 open reading frame 116, mRNA (cDNA clone MGC:2742 IMAGE:2822914), complete cds Length = 2270 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 1328 tcagcctgcagctccagccca 1348
>emb|Z92796.1|CEH25K10 Caenorhabditis elegans Fosmid H25K10, complete sequence Length = 38553 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 803 aaaatactaaaaaattgcaataaag 827 ||||| ||||||||||||||||||| Sbjct: 23002 aaaattctaaaaaattgcaataaag 23026
>gb|AC093877.3| Homo sapiens BAC clone RP11-637G19 from 4, complete sequence Length = 162150 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1224 ttgctcccagctcgcctccct 1244 ||||||||||||||||||||| Sbjct: 139785 ttgctcccagctcgcctccct 139765
>gb|AC098935.2| Homo sapiens chromosome 1 clone RP11-564A8, complete sequence Length = 192565 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 174620 tcagcctgcagctccagccca 174600
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 89 gacctcggcatcgccgacgcc 109 ||||||||||||||||||||| Sbjct: 1609227 gacctcggcatcgccgacgcc 1609207
>emb|CR388137.8| Zebrafish DNA sequence from clone DKEY-17M13 in linkage group 5, complete sequence Length = 181599 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 811 aaaaaattgcaataaagctat 831 ||||||||||||||||||||| Sbjct: 109706 aaaaaattgcaataaagctat 109686
>gb|AC141554.5| Homo sapiens 12 BAC RP11-488P21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 141736 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 931 tctttacatcatgctcctcaa 951 ||||||||||||||||||||| Sbjct: 49629 tctttacatcatgctcctcaa 49649
>gb|AC095045.2| Homo sapiens BAC clone RP11-140M23 from 4, complete sequence Length = 176923 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 439 gcacggcaaaaccttctggga 459 ||||||||||||||||||||| Sbjct: 91399 gcacggcaaaaccttctggga 91419
>emb|AL832940.1|HSM804251 Homo sapiens mRNA; cDNA DKFZp666H2010 (from clone DKFZp666H2010) Length = 2427 Score = 42.1 bits (21), Expect = 5.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 342 tcagcctgcagctccagccca 362 ||||||||||||||||||||| Sbjct: 506 tcagcctgcagctccagccca 526
>dbj|AP005188.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0473C09 Length = 141066 Score = 42.1 bits (21), Expect = 5.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ctcggcatcgccgacgccatccacc 116 |||||| |||||||||||||||||| Sbjct: 1863 ctcggcgtcgccgacgccatccacc 1839
>gb|AY105091.1| Zea mays PCO138435 mRNA sequence Length = 1381 Score = 42.1 bits (21), Expect = 5.1 Identities = 39/45 (86%) Strand = Plus / Plus Query: 191 cgccgccttatgcgtgtgctcactgtctccggcgtcttcagcgtc 235 |||||||| ||||| |||||||| ||| | ||| ||||||||||| Sbjct: 313 cgccgcctcatgcgcgtgctcaccgtcacgggcatcttcagcgtc 357 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 222,894,351 Number of extensions: 11822161 Number of successful extensions: 240807 Number of sequences better than 10.0: 76 Number of HSP's gapped: 240787 Number of HSP's successfully gapped: 173 Length of query: 1336 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1313 Effective length of database: 18,503,978,556 Effective search space: 24295723844028 Effective search space used: 24295723844028 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)
