ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | FLbaf9e07 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | Os02g0183500:Os02g0183500 | 30 | 1.7 | 2 | AK121075:Os10g0524400 | 25 | 3.5 | 3 | AK073012:Os10g0524400 | 25 | 3.5 | 4 | AK108768:Os10g0524400 | 25 | 3.7 | 5 | AK100579:Os09g0543100 | 28 | 8.5 |
|---|
>Os02g0183500:Os02g0183500 | Length = 565 Score = 30.4 bits (67), Expect = 1.7 Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 1/35 (2%) Frame = -1 Query: 290 CRKYRERPTAPEVCATSIRMCPST-LPCVAAVMAC 189 CR R APEVCAT R+ P+ VAA AC Sbjct: 428 CRTTRAAAAAPEVCATVGRLTPAMYAQMVAAASAC 462
>AK121075:Os10g0524400 | Length = 1046 Score = 25.0 bits (53), Expect(2) = 3.5 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +1 Query: 4 HAVNPPRPSPSLPSKHQISVG 66 H PP PSPS PS I+ G Sbjct: 128 HHPEPPSPSPSAPSYPSIADG 148 Score = 22.7 bits (47), Expect(2) = 3.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 74 SSIPARSALDGLPPSLALDGG 136 +++PA S+ LPPS + GG Sbjct: 167 AAVPAASSPSVLPPSASFPGG 187
>AK073012:Os10g0524400 | Length = 1046 Score = 25.0 bits (53), Expect(2) = 3.5 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +1 Query: 4 HAVNPPRPSPSLPSKHQISVG 66 H PP PSPS PS I+ G Sbjct: 128 HHPEPPSPSPSAPSYPSIADG 148 Score = 22.7 bits (47), Expect(2) = 3.5 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 74 SSIPARSALDGLPPSLALDGG 136 +++PA S+ LPPS + GG Sbjct: 167 AAVPAASSPSVLPPSASFPGG 187
>AK108768:Os10g0524400 | Length = 521 Score = 25.0 bits (53), Expect(2) = 3.7 Identities = 11/21 (52%), Positives = 12/21 (57%) Frame = +1 Query: 4 HAVNPPRPSPSLPSKHQISVG 66 H PP PSPS PS I+ G Sbjct: 128 HHPEPPSPSPSAPSYPSIADG 148 Score = 22.7 bits (47), Expect(2) = 3.7 Identities = 9/21 (42%), Positives = 14/21 (66%) Frame = +2 Query: 74 SSIPARSALDGLPPSLALDGG 136 +++PA S+ LPPS + GG Sbjct: 167 AAVPAASSPSVLPPSASFPGG 187
>AK100579:Os09g0543100 | Length = 854 Score = 28.1 bits (61), Expect = 8.5 Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 14/59 (23%) Frame = +1 Query: 574 ISSGRHEKPKNRLFSTIHSR----------PRGCS----QSAL*LYCRMDGPVAYNTVQ 708 + GR++ P++RLF + + P G Q L+CR+DGP AY+ ++ Sbjct: 394 LCDGRYDTPEHRLFKDLDTVFDNDYHNPTFPSGAKGGPRQPWHDLHCRIDGPAAYDVLK 452 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 25,712,779 Number of extensions: 578421 Number of successful extensions: 1750 Number of sequences better than 10.0: 5 Number of HSP's gapped: 1747 Number of HSP's successfully gapped: 8 Length of query: 293 Length of database: 15,399,855 Length adjustment: 100 Effective length of query: 193 Effective length of database: 11,395,755 Effective search space: 2199380715 Effective search space used: 2199380715 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
