Clone Name | FLbaf9d05 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | AK069440:Os04g0499200 | 161 | 4e-40 | 2 | AK119859: | 28 | 5.4 | 3 | AK112094:Os03g0851600 | 28 | 5.4 | 4 | AK101177:Os03g0851600 | 28 | 5.4 | 5 | Os09g0455400:Os09g0455400 | 28 | 9.2 | 6 | Os04g0552000:Os04g0552000 | 28 | 9.2 |
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>AK069440:Os04g0499200 | Length = 111 Score = 161 bits (408), Expect = 4e-40 Identities = 78/111 (70%), Positives = 90/111 (81%), Gaps = 8/111 (7%) Frame = +1 Query: 178 MAGRHTIVLMQPSPNKASRTFMDFSSLNQALDG--------ICARYEKKIMDINPLARNF 333 MAGRHTI+LMQPS N+A+RTFMDF+S+N ALDG IC YE+KI DINP+AR+ Sbjct: 1 MAGRHTIILMQPSQNRATRTFMDFNSVNHALDGRLLYGMTGICGLYERKIRDINPMARDL 60 Query: 334 TYDITDLYNFIDGLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486 TYDI DLYNFIDGL DISALV+D L AFLPYDR+WIKQ+MFQHLK A+Q Sbjct: 61 TYDINDLYNFIDGLTDISALVFDRSLHAFLPYDRRWIKQEMFQHLKRLAQQ 111
>AK119859: | Length = 727 Score = 28.5 bits (62), Expect = 5.4 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = -2 Query: 170 AQKQKQMQKQGSPAQASVGPKNPRRRDQRPRLSCEKRERSGVEPRRNTAR 21 A ++K+++KQ + K RRR +R + ++ER + RR R Sbjct: 173 AVREKELEKQRQIEREERAKKEERRRREREQEEAREKERQAEKERRRKER 222
>AK112094:Os03g0851600 | Length = 476 Score = 28.5 bits (62), Expect = 5.4 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = -2 Query: 137 SPAQASVGPKNPRRRDQRPRLSCEKRERSGV 45 S + ASV P+ PR +++P+L E++E + Sbjct: 107 SSSSASVPPERPRALEKKPKLKIEQKEHQNL 137
>AK101177:Os03g0851600 | Length = 561 Score = 28.5 bits (62), Expect = 5.4 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = -2 Query: 137 SPAQASVGPKNPRRRDQRPRLSCEKRERSGV 45 S + ASV P+ PR +++P+L E++E + Sbjct: 172 SSSSASVPPERPRALEKKPKLKIEQKEHQNL 202
>Os09g0455400:Os09g0455400 | Length = 511 Score = 27.7 bits (60), Expect = 9.2 Identities = 19/66 (28%), Positives = 34/66 (51%) Frame = -2 Query: 215 DGCMRTMVCLPAILSAQKQKQMQKQGSPAQASVGPKNPRRRDQRPRLSCEKRERSGVEPR 36 +G + ++V LP +++ SP++ S P+ RRRD+ P +R+RS P Sbjct: 5 EGRLASVVHLPGRSRVSASPSPRRRRSPSR-SPSPRRNRRRDRSPSPYRSRRDRS-PSPY 62 Query: 35 RNTARR 18 R+ R+ Sbjct: 63 RDRRRQ 68
>Os04g0552000:Os04g0552000 | Length = 431 Score = 27.7 bits (60), Expect = 9.2 Identities = 16/46 (34%), Positives = 22/46 (47%) Frame = -2 Query: 203 RTMVCLPAILSAQKQKQMQKQGSPAQASVGPKNPRRRDQRPRLSCE 66 +T+V I S K + A P+ PRRR +R RLSC+ Sbjct: 240 KTLVASNVIPSGWKPGMSYISTASEAARRRPRQPRRRRRRRRLSCQ 285 Database: orf_amino.fa.out Posted date: Jul 26, 2007 11:37 AM Number of letters in database: 15,399,855 Number of sequences in database: 40,041 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 40041 Number of Hits to DB: 21,433,576 Number of extensions: 461341 Number of successful extensions: 1436 Number of sequences better than 10.0: 6 Number of HSP's gapped: 1434 Number of HSP's successfully gapped: 6 Length of query: 260 Length of database: 15,399,855 Length adjustment: 99 Effective length of query: 161 Effective length of database: 11,435,796 Effective search space: 1841163156 Effective search space used: 1841163156 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)