>Q96319:ERH_ARATH Enhancer of rudimentary homolog - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 109
 Score =  152 bits (384), Expect = 1e-36
 Identities = 68/104 (65%), Positives = 84/104 (80%)
 Frame = +1

Query: 169 AESMAGRHTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDIT 348
           A   + RHTI+L+Q SP++A+RTFMD+ S+ QA+DGIC  YE+K+ +INP  RN +YDI 
Sbjct: 2   ANHNSSRHTIILLQNSPSRATRTFMDYDSIGQAMDGICGLYERKLKEINPSLRNISYDIA 61

Query: 349 DLYNFIDGLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQA 480
           DLYNFIDGLAD+SALVYDH + A+LPYDRQWIKQK F HLK  A
Sbjct: 62  DLYNFIDGLADLSALVYDHSISAYLPYDRQWIKQKAFHHLKRIA 105

>P84089:ERH_MOUSE Enhancer of rudimentary homolog - Mus musculus (Mouse)|
          Length = 104

 Score =  102 bits (255), Expect = 1e-21
 Identities = 43/99 (43%), Positives = 70/99 (70%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP+     RT+ D+ S+N+ ++G+C  YE+ +  +NP + + TYDI+ L++FID
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
            LAD+S LVY    Q + PY++ WIK+K++  L+ QA+Q
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQ 101

>P84090:ERH_HUMAN Enhancer of rudimentary homolog - Homo sapiens (Human)|
          Length = 104

 Score =  102 bits (255), Expect = 1e-21
 Identities = 43/99 (43%), Positives = 70/99 (70%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP+     RT+ D+ S+N+ ++G+C  YE+ +  +NP + + TYDI+ L++FID
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
            LAD+S LVY    Q + PY++ WIK+K++  L+ QA+Q
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQ 101

>Q3SZC0:ERH_BOVIN Enhancer of rudimentary homolog - Bos taurus (Bovine)|
          Length = 104

 Score =  102 bits (255), Expect = 1e-21
 Identities = 43/99 (43%), Positives = 70/99 (70%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP+     RT+ D+ S+N+ ++G+C  YE+ +  +NP + + TYDI+ L++FID
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
            LAD+S LVY    Q + PY++ WIK+K++  L+ QA+Q
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQ 101

>Q98874:ERH_DANRE Enhancer of rudimentary homolog - Danio rerio (Zebrafish)|
           (Brachydanio rerio)
          Length = 104

 Score =  102 bits (254), Expect = 2e-21
 Identities = 42/99 (42%), Positives = 70/99 (70%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP+     RT+ D+ S+N+ ++G+C  YE+ +  +NP + + TYDI+ L++F+D
Sbjct: 3   HTILLVQPTKRPEGRTYADYESVNECMEGVCKMYEEHLKRMNPNSPSITYDISQLFDFVD 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
            LAD+S LVY    Q + PY++ WIK+K++  L+ QA+Q
Sbjct: 63  DLADLSCLVYRADTQTYQPYNKDWIKEKIYVLLRRQAQQ 101

>Q93104:ERH_AEDAE Enhancer of rudimentary homolog - Aedes aegypti (Yellowfever|
           mosquito)
          Length = 103

 Score = 96.7 bits (239), Expect = 9e-20
 Identities = 40/97 (41%), Positives = 65/97 (67%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP  N  +RT+ D+ S+N+ ++G+C  YE+ +   NP     TYDI+ L++F+D
Sbjct: 3   HTILLVQPGRNPETRTYSDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFVD 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQA 480
            LAD+S LVY      + PY+++WIK+K++  L+  A
Sbjct: 63  QLADLSCLVYQKSTNTYAPYNKEWIKEKIYVLLRQAA 99

>Q94554:ER_DROVI Protein enhancer of rudimentary - Drosophila virilis (Fruit fly)|
          Length = 104

 Score = 93.2 bits (230), Expect = 1e-18
 Identities = 40/97 (41%), Positives = 62/97 (63%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP     +RT+ D+ S+N+ ++G+C  YE+ +   NP     TYDI+ L++FID
Sbjct: 3   HTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQA 480
            L DIS LVY      + PY++ WIK+K++  L+  A
Sbjct: 63  TLIDISCLVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 99

>Q24337:ER_DROME Protein enhancer of rudimentary - Drosophila melanogaster (Fruit|
           fly)
          Length = 104

 Score = 92.0 bits (227), Expect = 2e-18
 Identities = 38/97 (39%), Positives = 62/97 (63%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP     +RT+ D+ S+N+ ++G+C  YE+ +   NP     TYDI+ L++FID
Sbjct: 3   HTILLVQPGARPETRTYCDYESVNECMEGVCKIYEEHLKRRNPNTPTITYDISQLFDFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQA 480
            + DIS +VY      + PY++ WIK+K++  L+  A
Sbjct: 63  TMVDISCMVYQKSTNTYAPYNKDWIKEKIYVLLRQAA 99

>P69100:ERH_TAESO Enhancer of rudimentary homolog - Taenia solium (Pork tapeworm)|
          Length = 102

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +1

Query: 190 HTIVLMQPSPNKA-SRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFI 366
           HTI+L+Q    K  SR + D+ +LNQ L+G+C  YE+++   NP A   TYDI+ L+ FI
Sbjct: 3   HTILLVQQQVKKPESRVWADYETLNQCLEGVCKIYEEQLKQQNPTAPTITYDISQLFKFI 62

Query: 367 DGLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
           D LAD+S L +      ++P+ + WIK+ ++  L+NQA Q
Sbjct: 63  DQLADLSCLEFHPATGTYVPHTKDWIKENIYALLRNQAGQ 102

>P69099:ERH_ECHMU Enhancer of rudimentary homolog - Echinococcus multilocularis|
          Length = 102

 Score = 89.0 bits (219), Expect = 2e-17
 Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +1

Query: 190 HTIVLMQPSPNKA-SRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFI 366
           HTI+L+Q    K  SR + D+ +LNQ L+G+C  YE+++   NP A   TYDI+ L+ FI
Sbjct: 3   HTILLVQQQVKKPESRVWADYETLNQCLEGVCKIYEEQLKQQNPTAPTITYDISQLFKFI 62

Query: 367 DGLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQARQ 486
           D LAD+S L +      ++P+ + WIK+ ++  L+NQA Q
Sbjct: 63  DQLADLSCLEFHPATGTYVPHTKDWIKENIYALLRNQAGQ 102

>Q22640:ERH_CAEEL Enhancer of rudimentary homolog - Caenorhabditis elegans|
          Length = 103

 Score = 82.8 bits (203), Expect = 1e-15
 Identities = 35/96 (36%), Positives = 63/96 (65%)
 Frame = +1

Query: 190 HTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYDITDLYNFID 369
           HTI+L+QP+ N  SR++ D+ +  + L+GIC  YE+ +    P     TYDI+ L+ FID
Sbjct: 3   HTILLLQPTDNIESRSWSDYENTTECLEGICRVYEEYLKKKVPAQNEITYDISHLFEFID 62

Query: 370 GLADISALVYDHQLQAFLPYDRQWIKQKMFQHLKNQ 477
            L D+S LV D+    ++P+++Q++K+ +++ + N+
Sbjct: 63  DLKDLSMLVLDNTTYTYVPHNKQYVKESIYKLMNNR 98

>Q47UV7:RL10_COLP3 50S ribosomal protein L10 - Colwellia psychrerythraea (strain 34H /|
           ATCC BAA-681) (Vibrio psychroerythus)
          Length = 164

 Score = 35.0 bits (79), Expect = 0.33
 Identities = 18/53 (33%), Positives = 26/53 (49%)
 Frame = +1

Query: 184 GRHTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYD 342
           G   I      P  A+R F DF+  N+  +   A +E   +D+N LA+  TYD
Sbjct: 78  GPSLIAFSSDHPGAAARLFTDFAKANENFELKAAAFEGNAVDVNMLAKLPTYD 130

>Q9CK89:RL10_PASMU 50S ribosomal protein L10 - Pasteurella multocida|
          Length = 163

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +1

Query: 172 ESMAGRHTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYD 342
           ++  G   I      P  A+R F DF+  N   +   A +E KI D+  LA   TYD
Sbjct: 74  DTFVGPTLIAFSTEHPGAAARLFKDFAKANDKFEIKGAAFEGKIQDVEFLATLPTYD 130

>Q74Z13:PEX6_ASHGO Peroxisomal biogenesis factor 6 - Ashbya gossypii (Yeast)|
           (Eremothecium gossypii)
          Length = 1021

 Score = 32.3 bits (72), Expect = 2.1
 Identities = 17/74 (22%), Positives = 36/74 (48%)
 Frame = +1

Query: 91  SLLLGFFGPTLACAGDPCFCICFCFCAESMAGRHTIVLMQPSPNKASRTFMDFSSLNQAL 270
           +L+    G +LA      +C  F    + +     + +  PS ++ ++T++  S+LN+ L
Sbjct: 5   NLVFSASGTSLASVSRELYCTLFGPAPDELKHEFYVSVQLPSYSRHAKTYVVQSTLNETL 64

Query: 271 DGICARYEKKIMDI 312
           +G   +   KI D+
Sbjct: 65  EGQVVQLPSKIEDV 78

>P80230:ERH_PIG Enhancer of rudimentary homolog [Contains: Antibacterial peptide|
           3910] - Sus scrofa (Pig)
          Length = 32

 Score = 31.6 bits (70), Expect = 3.6
 Identities = 11/25 (44%), Positives = 19/25 (76%)
 Frame = +1

Query: 412 QAFLPYDRQWIKQKMFQHLKNQARQ 486
           Q + PY++ WIK+K++  L+ QA+Q
Sbjct: 5   QTYQPYNKDWIKEKIYVLLRRQAQQ 29

>Q27380:TBB_EIMTE Tubulin beta chain - Eimeria tenella|
          Length = 449

 Score = 30.8 bits (68), Expect = 6.2
 Identities = 30/98 (30%), Positives = 40/98 (40%), Gaps = 6/98 (6%)
 Frame = +1

Query: 7   IPFYRRAVFLLGSTPLLSRFSQERRGRWSLLLG---FFGPTLACAGDPCFCICFCFCA-- 171
           +PF R   FL+G  PL SR SQ+ R      L    F    + CA DP        CA  
Sbjct: 258 VPFPRLHFFLIGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMCASDPRHGRYLTACALF 317

Query: 172 -ESMAGRHTIVLMQPSPNKASRTFMDFSSLNQALDGIC 282
              M+ +     M    NK S  F+++   N    G+C
Sbjct: 318 RGRMSTKEVDEQMLNVQNKNSSYFVEWIP-NNMKSGVC 354

>P97445:CAC1A_MOUSE Voltage-dependent P/Q-type calcium channel subunit alpha-1A - Mus|
            musculus (Mouse)
          Length = 2368

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -2

Query: 173  SAQKQKQMQKQGSPAQASVGPKNPRR-RDQRPRLSCEKRERSGVE--PRRNTARR 18
            +  +Q      GSPA ++ G   PRR R Q P+  C  R        PRR  ARR
Sbjct: 2208 TTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARR 2262

>P50262:TBB4_OOMCK Tubulin beta-4 chain - Oomycete-like sp. (strain MacKay2000)|
          Length = 451

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 27/87 (31%), Positives = 36/87 (41%), Gaps = 6/87 (6%)
 Frame = +1

Query: 7   IPFYRRAVFLLGSTPLLSRFSQERRGRWSLLLG---FFGPTLACAGDP---CFCICFCFC 168
           IPF R   F+LG  PL SR SQ+ R      L    F    + CA DP    +    C  
Sbjct: 258 IPFPRLHFFMLGFAPLTSRGSQQYRALTVPELTSQCFDAKNMMCAADPRHGRYLTASCMF 317

Query: 169 AESMAGRHTIVLMQPSPNKASRTFMDF 249
              M+ +     M    NK S  F+++
Sbjct: 318 RGRMSTKEVDEQMLNVQNKNSSYFVEW 344

>Q7MGR6:RL10_VIBVY 50S ribosomal protein L10 - Vibrio vulnificus (strain YJ016)|
          Length = 162

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 172 ESMAGRHTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYD 342
           ++  G   I      P  A+R F DF+  N+  +   A +E  + D   LA   TYD
Sbjct: 74  DTFTGPSLIAFSNEHPGAAARLFKDFAKENKKFEIKAAAFEGALTDAEVLATLPTYD 130

>Q8DD22:RL10_VIBVU 50S ribosomal protein L10 - Vibrio vulnificus|
          Length = 162

 Score = 30.4 bits (67), Expect = 8.1
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = +1

Query: 172 ESMAGRHTIVLMQPSPNKASRTFMDFSSLNQALDGICARYEKKIMDINPLARNFTYD 342
           ++  G   I      P  A+R F DF+  N+  +   A +E  + D   LA   TYD
Sbjct: 74  DTFTGPSLIAFSNEHPGAAARLFKDFAKENKKFEIKAAAFEGALTDAEVLATLPTYD 130


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 130,165,025
Number of extensions: 2693221
Number of successful extensions: 7887
Number of sequences better than 10.0: 20
Number of HSP's gapped: 7880
Number of HSP's successfully gapped: 20
Length of query: 260
Length of database: 100,686,439
Length adjustment: 111
Effective length of query: 149
Effective length of database: 70,239,694
Effective search space: 10465714406
Effective search space used: 10465714406
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)