>Q7S9L2:STU1_NEUCR Protein stu-1 - Neurospora crassa|
          Length = 1136
 Score = 35.0 bits (79), Expect = 0.27
 Identities = 39/135 (28%), Positives = 51/135 (37%), Gaps = 18/135 (13%)
 Frame = +2

Query: 98   PDSSTKMPRIPMIRFPKRHLKVPSPPAAQPADQ--HATLMSRLGAKVDAP--SSGEKKNY 265
            P S    PRI  +  PK    V SP  A P  Q  H+T  S  G  +     SS  K   
Sbjct: 662  PASPPSKPRIKTVTSPKTQTLVISPKKAIPRPQQGHSTNSSESGIPIPVSGISSPTKPTS 721

Query: 266  RF-----RSDVPPA-PSHNAVGGPAS--------QLPKRKPLSEEEIEAIMQGGVF*YCF 403
             F     RS + P  P  + +  P+          LP+  P  +EE+  ++ G V     
Sbjct: 722  AFGLRSPRSPLAPELPPSSVIASPSRVMPDPAQIPLPESSPSKDEELSLVVPGSV----L 777

Query: 404  PTSCTFSGAPISPMP 448
            PT  T S    S  P
Sbjct: 778  PTQKTPSPTEESQQP 792

>Q86XD8:ANUB1_HUMAN AN1-type zinc finger and ubiquitin domain-containing protein 1 -|
           Homo sapiens (Human)
          Length = 727

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
 Frame = +2

Query: 113 KMPRIPMIRFPKRHLKV-PSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPP 289
           KM  + + + PK+ +K+ P PP A      +T  SR       P+ G+  +  F +  PP
Sbjct: 230 KMKNMNLSKKPKKAVKIKPHPPVAPRPSSGSTAPSRHRLLRVLPNIGQSCSPAFGNAYPP 289

Query: 290 APSHNAVGGPASQLPKRKPLS 352
             S N +   A+QL   + +S
Sbjct: 290 EISRNGISSLATQLSAERYIS 310

>Q6PG95:CRML_MOUSE Protein cramped-like - Mus musculus (Mouse)|
          Length = 1285

 Score = 34.3 bits (77), Expect = 0.47
 Identities = 24/66 (36%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = +2

Query: 56  SIEGFRGEISLDCSPDSSTKM----PRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLG 223
           S++G  G    D +  SSTK     PR      P R L  PSPP   P DQH  L S + 
Sbjct: 27  SLDG-EGPGGADAADSSSTKRDGQTPRASGAPAPPRGLPTPSPPQGSPQDQHHFLRSSVR 85

Query: 224 AKVDAP 241
            +   P
Sbjct: 86  PQSKRP 91

>Q9CQX8:RT36_MOUSE Mitochondrial 28S ribosomal protein S36 - Mus musculus (Mouse)|
          Length = 102

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 29/89 (32%), Positives = 39/89 (43%)
 Frame = +2

Query: 119 PRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPS 298
           P  P+I+FP R  K     +A  A   A L S   A +   S G           PP  +
Sbjct: 17  PHAPLIKFPNRRDKPKL--SASEALGSAALPSHSSA-ISQHSKGSTSPDLLMHQGPPDTA 73

Query: 299 HNAVGGPASQLPKRKPLSEEEIEAIMQGG 385
                 P  Q  +RKP+S+EE+E I +GG
Sbjct: 74  EIIKSLP--QKYRRKPMSQEEMEFIQRGG 100

>P03186:TEGU_EBV Large tegument protein - Epstein-Barr virus (strain B95-8) (HHV-4)|
           (Human herpesvirus 4)
          Length = 3149

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 34/133 (25%), Positives = 45/133 (33%), Gaps = 2/133 (1%)
 Frame = +2

Query: 95  SPDSSTKMPRIPMIRFPKRHLKVPSP--PAAQPADQHATLMSRLGAKVDAPSSGEKKNYR 268
           +P ++T  P     + P+     PSP  P  QP    A   S L  +   P S  +    
Sbjct: 530 APTTTTLSPPPTQQQPPQSAAPAPSPLLPQQQPTPSAAPAPSPLLPQQQPPPSAARAPSP 589

Query: 269 FRSDVPPAPSHNAVGGPASQLPKRKPLSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMP 448
                 P PS      PA QLP      E E              P +   +G  ISP P
Sbjct: 590 LPPQQQPLPSATPAPPPAQQLPPSATTLEPEKN-----------HPPAADRAGTEISPSP 638

Query: 449 CSIRNRFAQEPCY 487
                 F Q+P +
Sbjct: 639 -----PFGQQPSF 646

>Q86UR5:RIMS1_HUMAN Regulating synaptic membrane exocytosis protein 1 - Homo sapiens|
           (Human)
          Length = 1692

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 18/67 (26%), Positives = 30/67 (44%)
 Frame = +2

Query: 158 KVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPASQLPK 337
           + P+   A P D      +   A+  AP + +  N+      PPAP H  V   A +L  
Sbjct: 412 RAPAAARASPPDSPRAYSAERTAETRAPGAKQLTNHS-----PPAPRHGPVPAEAPELKA 466

Query: 338 RKPLSEE 358
           ++PL ++
Sbjct: 467 QEPLRKQ 473

>P24583:KPC1_YEAST Protein kinase C-like 1 - Saccharomyces cerevisiae (Baker's yeast)|
          Length = 1151

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 23/92 (25%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
 Frame = +2

Query: 5   RKGKTNRRGTPGFSIAISIEGFRGEISLDCSPDSSTKMPRIPMIRFPKRHLKVPSPPAA- 181
           R  +  +R  P   +  SI    G    D SP    +    P+   P++H K PSP    
Sbjct: 550 RNQEKKKRTVPSAQLGSSIGTANGS---DLSPSKLAERANAPLPPQPRKHDKTPSPQKVG 606

Query: 182 --QPADQHATLMSRLGAKVDAPSSGEKKNYRF 271
              P  QH  ++ +   K+   + G +K  +F
Sbjct: 607 RDSPTKQHDPIIDK---KISLQTHGREKLNKF 635

>O43516:WIPF1_HUMAN WAS/WASL-interacting protein family member 1 - Homo sapiens (Human)|
          Length = 503

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 37/130 (28%), Positives = 44/130 (33%), Gaps = 3/130 (2%)
 Frame = +2

Query: 128 PMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPS-SGEKKNYRFRSDVPPAPSHN 304
           P +  P R   +P PP+ +P         R G     P  S      R     P  PS +
Sbjct: 346 PPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRS 405

Query: 305 AVGGPASQLPKRKPLSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPC-SIRNRFAQEP 481
            V  P S    R PL  +   A                  GAP  P P  SIRN F   P
Sbjct: 406 GVDSPRSG--PRPPLPPDRPSA------------------GAPPPPPPSTSIRNGFQDSP 445

Query: 482 CY-LWNSCFW 508
           C   W S F+
Sbjct: 446 CEDEWESRFY 455

>P07665:SRYB_DROME Serendipity locus protein beta - Drosophila melanogaster (Fruit|
           fly)
          Length = 356

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
 Frame = +2

Query: 293 PSHNAVGGPASQLPKRKPLSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSIRNRFA 472
           P+   V   A + P+R+P  E+E E  M+  +    F  S      P   MP S    F 
Sbjct: 112 PAFKIVQATALKEPERQPGEEDECEEFMKEEMLDEEFQFS-----EPDDSMPSSEEEFFT 166

Query: 473 QE---PCYLWNSCFWSPELTNRHTR 538
           +    PC++    F S E+  RH +
Sbjct: 167 ETTEIPCHICGEMFSSQEVLERHIK 191

>Q62415:ASPP1_MOUSE Apoptosis-stimulating of p53 protein 1 - Mus musculus (Mouse)|
          Length = 1087

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +2

Query: 161 VPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPASQLPKR 340
           +P P A  P+ Q     + L    +AP  G  +  + R  VPP+P++   G PA      
Sbjct: 485 LPRPGAGPPSRQKP---APLPPASNAPQPGSSQQIQQRISVPPSPTYPPAGPPAFPTGDG 541

Query: 341 KP 346
           KP
Sbjct: 542 KP 543

>P82908:RT36_BOVIN Mitochondrial 28S ribosomal protein S36 - Bos taurus (Bovine)|
          Length = 103

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 29/89 (32%), Positives = 40/89 (44%)
 Frame = +2

Query: 119 PRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPS 298
           P  P+IRFP R    P P  ++   + A L S   + +   S G K         PP  +
Sbjct: 18  PHTPLIRFPDRRDN-PKPNVSEVL-RSAGLPSHTSS-ISQHSKGSKSPDWLMHQGPPDTA 74

Query: 299 HNAVGGPASQLPKRKPLSEEEIEAIMQGG 385
                 P  Q  +RK +S+EEIE I +GG
Sbjct: 75  EMIKTLP--QKYRRKLVSQEEIEFIQRGG 101

>P11247:PERM_MOUSE Myeloperoxidase precursor - Mus musculus (Mouse)|
          Length = 718

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = +2

Query: 446 PCSIRNRFAQEPCYLWNSCFWS--PELTNRHTRF 541
           PC + NR A+ PC+L      S  PELT+ HT F
Sbjct: 360 PCLLTNRSARIPCFLAGDMRSSEMPELTSMHTLF 393

>Q8K482:EMIL2_MOUSE EMILIN-2 precursor - Mus musculus (Mouse)|
          Length = 1074

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = +2

Query: 143 PKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPA 322
           PK H+K P PP+A+P +          ++V  P    KK     + V P    +A  GP 
Sbjct: 125 PKDHMKTPRPPSARPKNNLKKATDTDPSQVSQP----KKTLSPTNAVEPGQVADAKQGPP 180

Query: 323 SQLPKRKPLSEEEI 364
                +  + EE++
Sbjct: 181 ELQQSKVQVLEEKV 194

>Q90125:COAT_GMDNV Coat protein VP1/VP2/VP3/VP4 - Galleria mellonella densovirus|
           (GmDNV)
          Length = 811

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 3/133 (2%)
 Frame = -2

Query: 648 SFHDHIFWQGGAPTHTSHVQRSPFLVSH--MYAGNNSGNRVWRLVSSGDQKQEFHK*HGS 475
           S +D  F   G   H   V    FL ++  MY   N G   W  ++   Q+ +    +  
Sbjct: 564 STNDTAFGNAGNYPH-HQVSSFTFLQNYYCMYQQTNQGTGGWPCLAEHLQQFDSKTVNNQ 622

Query: 474 CAKRLRMLHGIGLIGAPLKVQLVGKQYQKTPPCMIASISSSESGLRL-GSCEAGPPTAL* 298
           C   +     +GLI +PL  +++G+      P +  +IS  ++ + + G+    PP A  
Sbjct: 623 CLIDVTYKPKMGLIKSPLNYKIIGQ------PTVKGTISVGDNLVNMRGAVVTNPPEATQ 676

Query: 297 EGAGGTSDLKR*F 259
             A  T +L R F
Sbjct: 677 NVAESTHNLTRNF 689

>Q90YI3:SYMM_FUGRU Methionyl-tRNA synthetase, mitochondrial precursor - Fugu rubripes|
           (Japanese pufferfish) (Takifugu rubripes)
          Length = 590

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 599 HMFSVHHFWLVTCMQGIIQETGCGGW 522
           H  +V HFW V C +G+I +    GW
Sbjct: 139 HHRAVQHFWSVLCSKGLIYKGSYEGW 164

>P75828:YBJD_ECOLI Uncharacterized protein ybjD - Escherichia coli|
          Length = 552

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
 Frame = -1

Query: 475 LCKTVTNAARHRAYWRSTKGAAGGEAISEDTALHDSFN----LFLREWFAL-GKL*SWPS 311
           +C+ V  ++R  A+     G +  +  S   + H  FN    LF R W  + G+  +W  
Sbjct: 336 VCRLVRESSRVAAWRLGPSGLSTED--SRRISFHIRFNRPSSLFARCWLLVEGETETWVI 393

Query: 310 NSIMRRCGWHI*SKA--VIFFLSR--RWCIYFSSQSGHEGRVLI 191
           N + R+CG H  ++   VI F     +  + F+ + G E  VL+
Sbjct: 394 NELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLV 437

>P82909:RT36_HUMAN Mitochondrial 28S ribosomal protein S36 - Homo sapiens (Human)|
          Length = 103

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 29/89 (32%), Positives = 41/89 (46%)
 Frame = +2

Query: 119 PRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPS 298
           P  P+IRFP R    P P  ++ A + A L S   + +   S G K         PP  +
Sbjct: 18  PHTPLIRFPDRRDN-PKPNVSE-ALRSAGLPSH-SSVISQHSKGSKSPDLLMYQGPPDTA 74

Query: 299 HNAVGGPASQLPKRKPLSEEEIEAIMQGG 385
                 P  Q  +RK +S+EE+E I +GG
Sbjct: 75  EIIKTLP--QKYRRKLVSQEEMEFIQRGG 101

>P41777:NOLC1_RAT Nucleolar phosphoprotein p130 - Rattus norvegicus (Rat)|
          Length = 704

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 28/98 (28%), Positives = 40/98 (40%)
 Frame = +2

Query: 74  GEISLDCSPDSSTKMPRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGE 253
           G+ S D    SS +  + P     K+     + P   P  + A   S   +  +  S  E
Sbjct: 476 GDSSSDSESSSSEEEKKTPPKPPAKKKAAGAAVPKPTPVKKAAAESSSSSSSSEDSSEEE 535

Query: 254 KKNYRFRSDVPPAPSHNAVGGPASQLPKRKPLSEEEIE 367
           KK  + ++  P   +  A G PASQ  K    SEEE E
Sbjct: 536 KKKPKSKA-TPKPQAGKANGVPASQNGKAGKESEEEEE 572

>Q72NX3:IF2_LEPIC Translation initiation factor IF-2 - Leptospira interrogans|
           serogroup Icterohaemorrhagiae serovar copenhageni
          Length = 891

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 22/96 (22%), Positives = 35/96 (36%)
 Frame = +2

Query: 89  DCSPDSSTKMPRIPMIRFPKRHLKVPSPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYR 268
           D S  S    P+   +       K P  P   P D   + + R      +P+  E+   +
Sbjct: 49  DPSTPSPAASPKKETVAESAPSSKPPVMPLPLPGDSGQSPIVRPAPSSHSPAKREESPGK 108

Query: 269 FRSDVPPAPSHNAVGGPASQLPKRKPLSEEEIEAIM 376
             +  PP       GG +S  P R P  +E+   I+
Sbjct: 109 QDAGRPPRDKDTRQGGGSSYPPSRSPFQKEDSNIIV 144

>P17671:E75BC_DROME Ecdysone-induced protein 75B isoforms C/D - Drosophila melanogaster|
            (Fruit fly)
          Length = 1199

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 25/97 (25%), Positives = 39/97 (40%)
 Frame = +2

Query: 167  SPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPASQLPKRKP 346
            +P ++      AT +  L  +VD   S +  N   +S  PP    +A+   A+ + +   
Sbjct: 1093 APASSSSGSNSATPLLEL--QVDIADSAQPLNLSKKSPTPPPSKLHALVAAANAVQRYPT 1150

Query: 347  LSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSI 457
            LS +       GG      P S   S AP S  P S+
Sbjct: 1151 LSADVTVTASNGG------PPSAAASPAPSSSPPASV 1181

>P13055:E75BB_DROME Ecdysone-induced protein 75B isoform B - Drosophila melanogaster|
            (Fruit fly)
          Length = 1412

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 25/97 (25%), Positives = 39/97 (40%)
 Frame = +2

Query: 167  SPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPASQLPKRKP 346
            +P ++      AT +  L  +VD   S +  N   +S  PP    +A+   A+ + +   
Sbjct: 1306 APASSSSGSNSATPLLEL--QVDIADSAQPLNLSKKSPTPPPSKLHALVAAANAVQRYPT 1363

Query: 347  LSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSI 457
            LS +       GG      P S   S AP S  P S+
Sbjct: 1364 LSADVTVTASNGG------PPSAAASPAPSSSPPASV 1394

>P17672:E75BA_DROME Ecdysone-induced protein 75B isoform A - Drosophila melanogaster|
            (Fruit fly)
          Length = 1355

 Score = 30.0 bits (66), Expect = 8.8
 Identities = 25/97 (25%), Positives = 39/97 (40%)
 Frame = +2

Query: 167  SPPAAQPADQHATLMSRLGAKVDAPSSGEKKNYRFRSDVPPAPSHNAVGGPASQLPKRKP 346
            +P ++      AT +  L  +VD   S +  N   +S  PP    +A+   A+ + +   
Sbjct: 1249 APASSSSGSNSATPLLEL--QVDIADSAQPLNLSKKSPTPPPSKLHALVAAANAVQRYPT 1306

Query: 347  LSEEEIEAIMQGGVF*YCFPTSCTFSGAPISPMPCSI 457
            LS +       GG      P S   S AP S  P S+
Sbjct: 1307 LSADVTVTASNGG------PPSAAASPAPSSSPPASV 1337


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 149,346,709
Number of extensions: 3783928
Number of successful extensions: 9843
Number of sequences better than 10.0: 22
Number of HSP's gapped: 9833
Number of HSP's successfully gapped: 22
Length of query: 233
Length of database: 100,686,439
Length adjustment: 110
Effective length of query: 123
Effective length of database: 70,513,989
Effective search space: 8673220647
Effective search space used: 8673220647
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)