ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK099648:Os04g0608500 40 0.011
2AK070519:Os04g0640500 31 5.0
3AK099192:Os01g0801500 31 5.0
4AK060529:Os01g0801500 31 5.0

>AK099648:Os04g0608500 |
          Length = 478
 Score = 40.0 bits (92), Expect = 0.011
 Identities = 31/72 (43%), Positives = 37/72 (51%)
 Frame = +2

Query: 2777 KLLTAISSAYHVKAKSKAKNGVESKDANKDNIAEAGSKANHQRTKLTMKDPTGSTVGKAA 2956
            KL TAI S Y  KAKS+AK   ESK AN++   E               D +GS+  KA 
Sbjct: 316  KLPTAILSTY-AKAKSRAKKDAESK-ANQEKATE---------------DASGSSSSKAT 358

Query: 2957 ETQENCADGKQV 2992
            +TQE  AD  QV
Sbjct: 359  KTQEKDADAMQV 370



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>AK070519:Os04g0640500 |
          Length = 720

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = +2

Query: 38  RPIPSRSATRRAAPSC---DGRQKNRRRQDPVNPLAKAGEQA*FHQI 169
           RP+P+ +  RR  P+      R++ RRR+ P+ PLA A   A  + +
Sbjct: 7   RPLPAPAPARRFEPAVRVPPPRRRRRRRRPPLPPLASASASAAIYSV 53



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>AK099192:Os01g0801500 |
          Length = 337

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 15/75 (20%)
 Frame = -1

Query: 3090 RYNSAGDKATI*SLAISVLP--RDLQ---RNLGLHGSITC----------FPSAQFSCVS 2956
            RY +AG++      A SVLP  R+LQ   R  GL   +T           +P +Q +   
Sbjct: 112  RYINAGNEVIPGDEAASVLPAMRNLQSALRAAGLGVPVTTVVATSVLGSSYPPSQGAFSE 171

Query: 2955 AALPTVEPVGSFMVN 2911
            AALPTV P+ SF+ +
Sbjct: 172  AALPTVAPIVSFLAS 186



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>AK060529:Os01g0801500 |
          Length = 337

 Score = 31.2 bits (69), Expect = 5.0
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 15/75 (20%)
 Frame = -1

Query: 3090 RYNSAGDKATI*SLAISVLP--RDLQ---RNLGLHGSITC----------FPSAQFSCVS 2956
            RY +AG++      A SVLP  R+LQ   R  GL   +T           +P +Q +   
Sbjct: 112  RYINAGNEVIPGDEAASVLPAMRNLQSALRAAGLGVPVTTVVATSVLGSSYPPSQGAFSE 171

Query: 2955 AALPTVEPVGSFMVN 2911
            AALPTV P+ SF+ +
Sbjct: 172  AALPTVAPIVSFLAS 186


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 90,138,480
Number of extensions: 1956825
Number of successful extensions: 4562
Number of sequences better than 10.0: 4
Number of HSP's gapped: 4557
Number of HSP's successfully gapped: 4
Length of query: 1110
Length of database: 15,399,855
Length adjustment: 111
Effective length of query: 999
Effective length of database: 10,955,304
Effective search space: 10944348696
Effective search space used: 10944348696
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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