ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Q8JFN7:ACH91_ONCMY Neuronal acetylcholine receptor subunit alpha... 34 3.5
2Q8BGE9:RL3R1_MOUSE Relaxin-3 receptor 1 - Mus musculus (Mouse) 33 6.0

>Q8JFN7:ACH91_ONCMY Neuronal acetylcholine receptor subunit alpha-9-I precursor -|
            Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri)
          Length = 572
 Score = 34.3 bits (77), Expect = 3.5
 Identities = 15/59 (25%), Positives = 31/59 (52%)
 Frame = +3

Query: 2130 LVAPTKVACWSCICTNCRCRIFKSFIHQVKENLCSMARTSQDESRLLQKKLSPRLTKVR 2306
            +V  T ++CW  +CT+ + R  +  ++ + EN  S  R  +D  + L   L   L++++
Sbjct: 4    VVLLTWISCWIDVCTSAQGRYAQKLLNDLMENYSSALRPVEDTDKTLNVTLQITLSQIK 62



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>Q8BGE9:RL3R1_MOUSE Relaxin-3 receptor 1 - Mus musculus (Mouse)|
          Length = 472

 Score = 33.5 bits (75), Expect = 6.0
 Identities = 27/98 (27%), Positives = 38/98 (38%)
 Frame = +2

Query: 2384 LCMRHWQRTQPSSWPDQAWKASKHANSSWLCMCLPLFLLSGKYVLRCLFDSRSCISGITI 2563
            LC+ H+   +   W  Q W    H     L   LPL ++S  Y+L   F        I+ 
Sbjct: 246  LCLMHFP-DKLLGWDRQFWLGLYHLQKVLLGFLLPLSIISLCYLLLVRF--------ISD 296

Query: 2564 EEVCGGKDNKECSPGTGQRLQTVQCLYRAKITNSAVLV 2677
              V G  D    +   G  L T     R+K+T S  +V
Sbjct: 297  RRVVGTTDAVGAAAAPGGGLSTASARRRSKVTKSVTIV 334


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 560,000,845
Number of extensions: 11897029
Number of successful extensions: 25229
Number of sequences better than 10.0: 2
Number of HSP's gapped: 25208
Number of HSP's successfully gapped: 2
Length of query: 1110
Length of database: 100,686,439
Length adjustment: 124
Effective length of query: 986
Effective length of database: 66,673,859
Effective search space: 65740424974
Effective search space used: 65740424974
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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