ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf9b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_001030279.1| Tetrahymena thermophila SB210 Leucine Rich R... 48 0.21
2ref|XM_001193602.1| PREDICTED: Strongylocentrotus purpuratus sim... 48 0.21
3ref|XM_790312.2| PREDICTED: Strongylocentrotus purpuratus simila... 48 0.21
4gb|AC122188.4| Mus musculus BAC clone RP23-33B7 from chromosome ... 48 0.21
5dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.21
6gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloropl... 48 0.21
7gb|AC142407.3| Mus musculus BAC clone RP24-497N7 from chromosome... 48 0.21
8gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.21
9gb|AC183777.9| Medicago truncatula clone mth2-67d13, complete se... 46 0.82
10gb|AC158210.18| Medicago truncatula clone mth2-155o19, complete ... 46 0.82
11gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 46 0.82
12gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, com... 46 0.82
13gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, comp... 46 0.82
14dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.82
15gb|AC096918.2| Homo sapiens chromosome 3 clone RP11-587M6, compl... 46 0.82
16dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.82
17dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.82
18dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.82
19dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.82
20gb|AC023798.16| Homo sapiens 3 BAC CTC-485N2 (Cal Tech Human BAC... 46 0.82
21gb|AC137840.2| Homo sapiens chromosome 3 clone CTB-85O21, comple... 46 0.82
22gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, compl... 46 0.82
23emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa... 46 0.82
24emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb... 46 0.82
25ref|XM_761879.1| Giardia lamblia ATCC 50803 hypothetical protein... 46 0.82
26ref|XM_001023621.1| Tetrahymena thermophila SB210 hypothetical p... 44 3.2
27ref|XM_001020637.1| Tetrahymena thermophila SB210 hypothetical p... 44 3.2
28gb|CP000425.1| Lactococcus lactis subsp. cremoris SK11, complete... 44 3.2
29gb|AC187633.2| Pan troglodytes BAC clone CH251-308O3 from chromo... 44 3.2
30gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, comp... 44 3.2
31gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome... 44 3.2
32gb|AC131301.9| Mus musculus chromosome 14, clone RP24-70B5, comp... 44 3.2
33gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome... 44 3.2
34gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genom... 44 3.2
35gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome... 44 3.2
36gb|AC055872.23| Homo sapiens chromosome 17, clone RP11-636N17, c... 44 3.2
37gb|AC099548.6| Homo sapiens BAC clone RP11-307I2 from 7, complet... 44 3.2
38gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, comple... 44 3.2
39gb|AC106862.3| Homo sapiens BAC clone RP11-61L23 from 7, complet... 44 3.2
40gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, co... 44 3.2
41gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 1... 44 3.2
42gb|AC148828.2| Pan troglodytes BAC clone CH251-136M2 from chromo... 44 3.2
43gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 44 3.2
44emb|Z46934.1|CEZK1320 Caenorhabditis elegans Cosmid ZK1320, comp... 44 3.2
45dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
46dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
47dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
48dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
49dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
50dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
51dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
52dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
53dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
54gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, c... 44 3.2
55gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome... 44 3.2
56emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4,... 44 3.2
57emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, B... 44 3.2
58gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome... 44 3.2
59gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome... 44 3.2
60dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
61gb|AF193600.1|F193595S06 Mus musculus SON protein (Son) gene, ex... 44 3.2
62dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
63dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
64dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
65dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
66dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
67dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic D... 44 3.2
68emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, co... 44 3.2
69dbj|AK122418.1| Mus musculus mRNA for mKIAA1019 protein 44 3.2
70emb|BX927216.16| Zebrafish DNA sequence from clone DKEY-179A6 in... 44 3.2
71gb|AC108818.11| Mus musculus chromosome 7, clone RP23-474B17, co... 44 3.2
72ref|NM_178880.3| Mus musculus Son cell proliferation protein (So... 44 3.2
73emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa... 44 3.2
74gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome... 44 3.2
75gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome... 44 3.2 
>ref|XM_001030279.1| Tetrahymena thermophila SB210 Leucine Rich Repeat family protein
            (TTHERM_01106180) mRNA, complete cds
          Length = 1482
 Score = 48.1 bits (24), Expect = 0.21
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 1861 tattttctttattttaagtatttt 1884
            ||||||||||||||||||||||||
Sbjct: 1054 tattttctttattttaagtatttt 1031
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>ref|XM_001193602.1| PREDICTED: Strongylocentrotus purpuratus similar to zinc finger
            protein (LOC590715), mRNA
          Length = 7959

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1312 attgtgcaggatgatgaatatatg 1335
            ||||||||||||||||||||||||
Sbjct: 3604 attgtgcaggatgatgaatatatg 3627
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>ref|XM_790312.2| PREDICTED: Strongylocentrotus purpuratus similar to zinc finger
            protein (LOC590715), mRNA
          Length = 7959

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 1312 attgtgcaggatgatgaatatatg 1335
            ||||||||||||||||||||||||
Sbjct: 3604 attgtgcaggatgatgaatatatg 3627
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>gb|AC122188.4| Mus musculus BAC clone RP23-33B7 from chromosome 10, complete
            sequence
          Length = 217173

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 490  tattattattttaacttttttctt 513
            ||||||||||||||||||||||||
Sbjct: 3669 tattattattttaacttttttctt 3646
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 322     gatgtactccgtccgtcccacaatataa 349
               |||||||||| |||||||||||||||||
Sbjct: 8272371 gatgtactccctccgtcccacaatataa 8272398



 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 512208 tactccctccgtcccacaatataaag 512183



 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 326      tactccgtccgtcccacaatataaag 351
                |||||| |||||||||||||||||||
Sbjct: 17112398 tactccctccgtcccacaatataaag 17112423
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>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome
          Length = 160301

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 487   tgttattattattttaacttttttcttt 514
             ||||||||||||||| ||||||||||||
Sbjct: 53404 tgttattattattttgacttttttcttt 53431
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>gb|AC142407.3| Mus musculus BAC clone RP24-497N7 from chromosome 10, complete
            sequence
          Length = 171327

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 490  tattattattttaacttttttctt 513
            ||||||||||||||||||||||||
Sbjct: 8367 tattattattttaacttttttctt 8390
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>gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
             complete sequence
          Length = 126040

 Score = 48.1 bits (24), Expect = 0.21
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                         
Query: 322   gatgtactccgtccgtcccacaatataa 349
             |||||||||| |||||||||||||||||
Sbjct: 11792 gatgtactccctccgtcccacaatataa 11819
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>gb|AC183777.9| Medicago truncatula clone mth2-67d13, complete sequence
          Length = 141452

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 323   atgtactccgtccgtcccacaatataa 349
             ||||||||| |||||||||||||||||
Sbjct: 62536 atgtactccatccgtcccacaatataa 62562
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>gb|AC158210.18| Medicago truncatula clone mth2-155o19, complete sequence
          Length = 132544

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 323    atgtactccgtccgtcccacaatataa 349
              ||||||||| |||||||||||||||||
Sbjct: 121970 atgtactccatccgtcccacaatataa 121996
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>gb|AC133330.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 164916

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 2971 ctgtgctgatggaaagcaggtga 2993
            |||||||||||||||||||||||
Sbjct: 1511 ctgtgctgatggaaagcaggtga 1489
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>gb|AC021305.9| Homo sapiens chromosome 8, clone RP11-140B16, complete sequence
          Length = 164916

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 2971 ctgtgctgatggaaagcaggtga 2993
            |||||||||||||||||||||||
Sbjct: 1512 ctgtgctgatggaaagcaggtga 1490
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>gb|AC018992.6| Homo sapiens chromosome 8, clone RP11-468O2, complete sequence
          Length = 151712

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 2971 ctgtgctgatggaaagcaggtga 2993
            |||||||||||||||||||||||
Sbjct: 920  ctgtgctgatggaaagcaggtga 942
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12
          Length = 27566993

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 325      gtactccgtccgtcccacaatataaag 351
                ||||||| |||||||||||||||||||
Sbjct: 19718345 gtactccctccgtcccacaatataaag 19718319



 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 323      atgtactccgtccgtcccacaatataa 349
                ||||||||| |||||||||||||||||
Sbjct: 26454827 atgtactccctccgtcccacaatataa 26454853



 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 326      tactccgtccgtcccacaatataaag 351
                |||||| |||||||||||||||||||
Sbjct: 16452985 tactccctccgtcccacaatataaag 16453010
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>gb|AC096918.2| Homo sapiens chromosome 3 clone RP11-587M6, complete sequence
          Length = 170134

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 3280  tatcatcttaattaggcaattgc 3302
             |||||||||||||||||||||||
Sbjct: 53599 tatcatcttaattaggcaattgc 53621
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 323     atgtactccgtccgtcccacaatataa 349
               ||||||||| |||||||||||||||||
Sbjct: 4468424 atgtactccctccgtcccacaatataa 4468398



 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 325      gtactccgtccgtcccacaatataaag 351
                ||||||| |||||||||||||||||||
Sbjct: 26122549 gtactccctccgtcccacaatataaag 26122523
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>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005A05
          Length = 162520

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 323   atgtactccgtccgtcccacaatataa 349
             ||||||||| |||||||||||||||||
Sbjct: 63154 atgtactccctccgtcccacaatataa 63128
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>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0470C02
          Length = 158849

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 323    atgtactccgtccgtcccacaatataa 349
              ||||||||| |||||||||||||||||
Sbjct: 116105 atgtactccctccgtcccacaatataa 116079
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>dbj|AP003517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0062J02
          Length = 151636

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 325    gtactccgtccgtcccacaatataaag 351
              ||||||| |||||||||||||||||||
Sbjct: 101794 gtactccctccgtcccacaatataaag 101768
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>gb|AC023798.16| Homo sapiens 3 BAC CTC-485N2 (Cal Tech Human BAC Library C) complete
              sequence
          Length = 135382

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 3280   tatcatcttaattaggcaattgc 3302
              |||||||||||||||||||||||
Sbjct: 110257 tatcatcttaattaggcaattgc 110279
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>gb|AC137840.2| Homo sapiens chromosome 3 clone CTB-85O21, complete sequence
          Length = 113442

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 3280  tatcatcttaattaggcaattgc 3302
             |||||||||||||||||||||||
Sbjct: 71131 tatcatcttaattaggcaattgc 71153
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>gb|AF267168.3| Homo sapiens chromosome 8 clone RP11-134N2, complete sequence
          Length = 180957

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 2971  ctgtgctgatggaaagcaggtga 2993
             |||||||||||||||||||||||
Sbjct: 17511 ctgtgctgatggaaagcaggtga 17489
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>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 146366

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 323   atgtactccgtccgtcccacaatataa 349
             ||||||||| |||||||||||||||||
Sbjct: 87249 atgtactccctccgtcccacaatataa 87223
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>emb|AL837527.2|CNS08CAQ Oryza sativa chromosome 12, . BAC OSJNBb0078B20 of library OSJNBb
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 133659

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                       
Query: 325  gtactccgtccgtcccacaatataaag 351
            ||||||| |||||||||||||||||||
Sbjct: 8648 gtactccctccgtcccacaatataaag 8674
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>ref|XM_761879.1| Giardia lamblia ATCC 50803 hypothetical protein
           (GLP_398_7969_10338) partial mRNA
          Length = 2370

 Score = 46.1 bits (23), Expect = 0.82
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 939 agtatgatggcaacgtcctacat 961
           |||||||||||||||||||||||
Sbjct: 796 agtatgatggcaacgtcctacat 818
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>ref|XM_001023621.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00730250)
            mRNA, complete cds
          Length = 1533

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1856 atgtgtattttctttattttaa 1877
            ||||||||||||||||||||||
Sbjct: 39   atgtgtattttctttattttaa 18
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>ref|XM_001020637.1| Tetrahymena thermophila SB210 hypothetical protein (TTHERM_00220650)
            mRNA, complete cds
          Length = 1449

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 1863 ttttctttattttaagtatttt 1884
            ||||||||||||||||||||||
Sbjct: 98   ttttctttattttaagtatttt 77
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>gb|CP000425.1| Lactococcus lactis subsp. cremoris SK11, complete genome
          Length = 2438589

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1867   ctttattttaagtatttttata 1888
              ||||||||||||||||||||||
Sbjct: 656998 ctttattttaagtatttttata 657019
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>gb|AC187633.2| Pan troglodytes BAC clone CH251-308O3 from chromosome 7, complete
              sequence
          Length = 170574

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1698   attagtcatcctttcttctctc 1719
              ||||||||||||||||||||||
Sbjct: 106976 attagtcatcctttcttctctc 106997
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>gb|AC118621.6| Mus musculus chromosome 7, clone RP24-63H14, complete sequence
          Length = 230898

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 1860   gtattttctttattttaagtat 1881
              ||||||||||||||||||||||
Sbjct: 189290 gtattttctttattttaagtat 189269
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>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10,
              complete sequence
          Length = 149870

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 104132 tactccctccgtcccacaatataaag 104107
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>gb|AC131301.9| Mus musculus chromosome 14, clone RP24-70B5, complete sequence
          Length = 236224

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 489    ttattattattttaacttttttcttt 514
              ||||||||||||||| ||||||||||
Sbjct: 127253 ttattattattttaaattttttcttt 127278
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>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0007D07, complete sequence
          Length = 133930

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 324   tgtactccgtccgtcccacaatataa 349
             |||||||| |||||||||||||||||
Sbjct: 93894 tgtactccctccgtcccacaatataa 93869
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>gb|AC120538.4| Oryza sativa chromosome 3 BAC OSJNBb0059G13 genomic sequence, complete
              sequence
          Length = 157662

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 149575 tactccctccgtcccacaatataaag 149600
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>gb|AC131691.4| Mus musculus BAC clone RP23-388P2 from chromosome 16, complete sequence
          Length = 202652

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 2830   gaaaaatggtgtagaaagcaaagatg 2855
              ||||||||||| ||||||||||||||
Sbjct: 107892 gaaaaatggtgaagaaagcaaagatg 107917
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>gb|AC055872.23| Homo sapiens chromosome 17, clone RP11-636N17, complete sequence
          Length = 202360

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 503    acttttttctttgtagtgtttg 524
              ||||||||||||||||||||||
Sbjct: 137241 acttttttctttgtagtgtttg 137220
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>gb|AC099548.6| Homo sapiens BAC clone RP11-307I2 from 7, complete sequence
          Length = 109073

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1698  attagtcatcctttcttctctc 1719
             ||||||||||||||||||||||
Sbjct: 30837 attagtcatcctttcttctctc 30858
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>gb|AC073264.5| Homo sapiens BAC clone RP11-298A10 from 7, complete sequence
          Length = 200123

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 1698  attagtcatcctttcttctctc 1719
             ||||||||||||||||||||||
Sbjct: 73713 attagtcatcctttcttctctc 73692
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>gb|AC106862.3| Homo sapiens BAC clone RP11-61L23 from 7, complete sequence
          Length = 169723

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1698   attagtcatcctttcttctctc 1719
              ||||||||||||||||||||||
Sbjct: 104245 attagtcatcctttcttctctc 104266
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>gb|AC104871.8| Mus musculus chromosome 13, clone RP23-281C23, complete sequence
          Length = 165863

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 2193   ttcaaatcatttattcatcagg 2214
              ||||||||||||||||||||||
Sbjct: 140946 ttcaaatcatttattcatcagg 140967
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>gb|AC123517.2| Oryza sativa japonica cultivar-group chromosome 11 clone OSJNBb0074K09,
             complete sequence
          Length = 135363

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 324   tgtactccgtccgtcccacaatataa 349
             |||||||| |||||||||||||||||
Sbjct: 20960 tgtactccctccgtcccacaatataa 20985
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>gb|AC148828.2| Pan troglodytes BAC clone CH251-136M2 from chromosome 7, complete
              sequence
          Length = 162801

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1698   attagtcatcctttcttctctc 1719
              ||||||||||||||||||||||
Sbjct: 161028 attagtcatcctttcttctctc 161049
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 326   tactccgtccgtcccacaatataaag 351
             |||||| |||||||||||||||||||
Sbjct: 10222 tactccctccgtcccacaatataaag 10247
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>emb|Z46934.1|CEZK1320 Caenorhabditis elegans Cosmid ZK1320, complete sequence
          Length = 35989

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 506  tttttctttgtagtgtttgaatctat 531
            |||||||||||||| |||||||||||
Sbjct: 1782 tttttctttgtagtttttgaatctat 1757
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11
          Length = 28386948

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 324     tgtactccgtccgtcccacaatataa 349
               |||||||| |||||||||||||||||
Sbjct: 5964877 tgtactccctccgtcccacaatataa 5964902



 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 324      tgtactccgtccgtcccacaatataa 349
                |||||||| |||||||||||||||||
Sbjct: 19091076 tgtactccctccgtcccacaatataa 19091051
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10
          Length = 22685906

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 324     tgtactccgtccgtcccacaatataa 349
               |||||||| |||||||||||||||||
Sbjct: 2832421 tgtactccctccgtcccacaatataa 2832396
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8
          Length = 28434780

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 326     tactccgtccgtcccacaatataaag 351
               |||||| |||||||||||||||||||
Sbjct: 6741632 tactccctccgtcccacaatataaag 6741657
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9
          Length = 22696651

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 325      gtactccgtccgtcccacaatataaa 350
                ||||||| ||||||||||||||||||
Sbjct: 15784760 gtactccctccgtcccacaatataaa 15784735
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7
          Length = 29644043

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 320      aagatgtactccgtccgtcccacaatataa 349
                |||| ||||||| |||||||||||||||||
Sbjct: 22958380 aagaagtactccctccgtcccacaatataa 22958409
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5
          Length = 29737217

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 326      tactccgtccgtcccacaatataaag 351
                |||||| |||||||||||||||||||
Sbjct: 20105807 tactccctccgtcccacaatataaag 20105782
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4
          Length = 35498469

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 326     tactccgtccgtcccacaatataaag 351
               |||||| |||||||||||||||||||
Sbjct: 5172544 tactccctccgtcccacaatataaag 5172519
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2
          Length = 35954743

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 326      tactccgtccgtcccacaatataaag 351
                |||||| |||||||||||||||||||
Sbjct: 12891113 tactccctccgtcccacaatataaag 12891138



 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 324      tgtactccgtccgtcccacaatataa 349
                |||||||| |||||||||||||||||
Sbjct: 28868133 tgtactccctccgtcccacaatataa 28868158
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1
          Length = 43261740

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 324      tgtactccgtccgtcccacaatataa 349
                |||||||| |||||||||||||||||
Sbjct: 33941552 tgtactccctccgtcccacaatataa 33941577
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>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence
          Length = 118101

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 324   tgtactccgtccgtcccacaatataa 349
             |||||||| |||||||||||||||||
Sbjct: 13453 tgtactccctccgtcccacaatataa 13428
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>gb|AC155297.2| Mus musculus BAC clone RP24-238D1 from chromosome 13, complete sequence
          Length = 174487

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 2193   ttcaaatcatttattcatcagg 2214
              ||||||||||||||||||||||
Sbjct: 173029 ttcaaatcatttattcatcagg 173008
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>emb|AL606993.2|OSJN00121 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0051N19,
            complete sequence
          Length = 49800

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 326  tactccgtccgtcccacaatataaag 351
            |||||| |||||||||||||||||||
Sbjct: 6949 tactccctccgtcccacaatataaag 6924
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>emb|AL163812.1|ATF14F18 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F18 (ESSA project)
          Length = 103638

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 3268  atcactagctagtatcatctta 3289
             ||||||||||||||||||||||
Sbjct: 60634 atcactagctagtatcatctta 60613
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>gb|AC154857.2| Mus musculus BAC clone RP23-16K21 from chromosome 13, complete sequence
          Length = 214859

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 486    ctgttattattattttaacttt 507
              ||||||||||||||||||||||
Sbjct: 183018 ctgttattattattttaacttt 183039
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>gb|AC154799.3| Mus musculus BAC clone RP23-79K21 from chromosome 13, complete sequence
          Length = 206997

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 486   ctgttattattattttaacttt 507
             ||||||||||||||||||||||
Sbjct: 18920 ctgttattattattttaacttt 18941
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>dbj|AP003994.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1111_E07
          Length = 123613

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 324   tgtactccgtccgtcccacaatataa 349
             |||||||| |||||||||||||||||
Sbjct: 60825 tgtactccctccgtcccacaatataa 60850
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>gb|AF193600.1|F193595S06 Mus musculus SON protein (Son) gene, exon 6
          Length = 219

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2830 gaaaaatggtgtagaaagcaaagatg 2855
            ||||||||||| ||||||||||||||
Sbjct: 144  gaaaaatggtgaagaaagcaaagatg 169
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 324   tgtactccgtccgtcccacaatataa 349
             |||||||| |||||||||||||||||
Sbjct: 72995 tgtactccctccgtcccacaatataa 73020
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>dbj|AP005747.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0039E17
          Length = 144126

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 325   gtactccgtccgtcccacaatataaa 350
             ||||||| ||||||||||||||||||
Sbjct: 69946 gtactccctccgtcccacaatataaa 69921
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>dbj|AP005908.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1121_A05
          Length = 172668

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 320   aagatgtactccgtccgtcccacaatataa 349
             |||| ||||||| |||||||||||||||||
Sbjct: 33594 aagaagtactccctccgtcccacaatataa 33623
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>dbj|AP005612.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A18
          Length = 176755

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 110595 tactccctccgtcccacaatataaag 110620
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>dbj|AP004890.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
           PAC clone:P0688H12
          Length = 139279

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 326 tactccgtccgtcccacaatataaag 351
           |||||| |||||||||||||||||||
Sbjct: 756 tactccctccgtcccacaatataaag 781
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>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0089L03
          Length = 172106

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 326   tactccgtccgtcccacaatataaag 351
             |||||| |||||||||||||||||||
Sbjct: 94034 tactccctccgtcccacaatataaag 94059
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>emb|BX890610.8| Zebrafish DNA sequence from clone DKEY-122C9, complete sequence
          Length = 189827

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 1867  ctttattttaagtatttttata 1888
             ||||||||||||||||||||||
Sbjct: 17699 ctttattttaagtatttttata 17720
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>dbj|AK122418.1| Mus musculus mRNA for mKIAA1019 protein
          Length = 5567

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2830 gaaaaatggtgtagaaagcaaagatg 2855
            ||||||||||| ||||||||||||||
Sbjct: 1096 gaaaaatggtgaagaaagcaaagatg 1121
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>emb|BX927216.16| Zebrafish DNA sequence from clone DKEY-179A6 in linkage group 19,
             complete sequence
          Length = 96929

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 489   ttattattattttaactttttt 510
             ||||||||||||||||||||||
Sbjct: 48650 ttattattattttaactttttt 48671
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>gb|AC108818.11| Mus musculus chromosome 7, clone RP23-474B17, complete sequence
          Length = 180498

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 1860   gtattttctttattttaagtat 1881
              ||||||||||||||||||||||
Sbjct: 175644 gtattttctttattttaagtat 175665
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>ref|NM_178880.3| Mus musculus Son cell proliferation protein (Son), transcript variant
            1, mRNA
          Length = 8272

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2830 gaaaaatggtgtagaaagcaaagatg 2855
            ||||||||||| ||||||||||||||
Sbjct: 6559 gaaaaatggtgaagaaagcaaagatg 6584
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>emb|AL831812.5|CNS08CAP Oryza sativa chromosome 12, . BAC OSJNBa0054H15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155947

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 120805 tactccctccgtcccacaatataaag 120780
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>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03,
              complete sequence
          Length = 116214

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 110670 tactccctccgtcccacaatataaag 110645
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>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10,
              complete sequence
          Length = 108688

 Score = 44.1 bits (22), Expect = 3.2
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 326    tactccgtccgtcccacaatataaag 351
              |||||| |||||||||||||||||||
Sbjct: 103708 tactccctccgtcccacaatataaag 103733


  Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS,
  GSS,environmental samples or phase 0, 1 or 2 HTGS sequences)
    Posted date:  Dec 3, 2006  5:45 PM
  Number of letters in database: 18,610,659,111
  Number of sequences in database:  4,638,285
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 4638285
Number of Hits to DB: 709,884,032
Number of extensions: 43089681
Number of successful extensions: 262674
Number of sequences better than 10.0: 75
Number of HSP's gapped: 262674
Number of HSP's successfully gapped: 82
Length of query: 3330
Length of database: 18,610,659,111
Length adjustment: 24
Effective length of query: 3306
Effective length of database: 18,499,340,271
Effective search space: 61158818935926
Effective search space used: 61158818935926
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 25 (49.6 bits)
S1: 15 (30.2 bits)
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