>Q9LZX1:Y5175_ARATH Uncharacterized protein At5g01750 - Arabidopsis thaliana (Mouse-ear|
           cress)
          Length = 217
 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 52/184 (28%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
 Frame = +1

Query: 208 VSLTVWRRSLLFNGKGFTVFDSNGNLVFRVETYARGSPREVVLMDADGLALLTVRRKKLS 387
           + + + R+ +      F + D NGNL+F+V+    G   + VL+D  G  ++T+R K +S
Sbjct: 38  IDMAIVRKMMSLTDGNFVITDVNGNLLFKVKEPVFGLHDKRVLLDGSGTPVVTLREKMVS 97

Query: 388 LAEEWLVYDGDGDELAPRRFTARRNMSL-LPTKSLCRLSPARSLDGTTGDAPGCRYHVEG 564
           + + W V+ G   +     +T +R+  L L TK    L       G   D   C + V+G
Sbjct: 98  MHDRWQVFRGGSTDQRDLLYTVKRSSMLQLKTKLDVFL-------GHNKDEKRCDFRVKG 150

Query: 565 SYASRSLHMFACTGGNQRRRVATVCRKEAA----IGPDVFRLMVEPDFEPALAMAVVILL 732
           S+  RS  ++A   G     VA + RK       +G D F + V P+ + A   ++V++L
Sbjct: 151 SWLERSCVVYA---GESDAIVAQMHRKHTVQSVFLGKDNFSVTVYPNVDYAFIASLVVIL 207

Query: 733 DQMN 744
           D +N
Sbjct: 208 DDVN 211

>Q59011:IMDH_METJA Inosine-5'-monophosphate dehydrogenase - Methanococcus jannaschii|
          Length = 496

 Score = 34.3 bits (77), Expect = 1.0
 Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
 Frame = -3

Query: 447 ESPGRQLVAVAVVDEPLLRQTQLLAADGEEGEAVGVHE-YDLAGRAAGVGLDAEDEVAVA 271
           E    Q+ AV   DE +++    ++ D   GEA+ V E Y ++G      +D ED++   
Sbjct: 80  EEQVHQVQAVKKADEVVIKDVITVSPDDTVGEAINVMETYSISGLPV---VDNEDKLVGI 136

Query: 270 VEHREPLAVEEQ 235
           + HR+  A+E++
Sbjct: 137 ITHRDVKAIEDK 148

>Q7VY01:MUTS_BORPE DNA mismatch repair protein mutS - Bordetella pertussis|
          Length = 883

 Score = 33.5 bits (75), Expect = 1.8
 Identities = 49/174 (28%), Positives = 68/174 (39%), Gaps = 14/174 (8%)
 Frame = -3

Query: 711 GQRRLEVWLHHQPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGV-----RPLHMVP 547
           G R L  WLHH    +R +  +L      A  L A   GE   AA G+       L+  P
Sbjct: 309 GSRLLRRWLHHP---LRENEPVLARQHAIATMLTARQEGEQTFAAAGLLETLRDALNAFP 365

Query: 546 AARRIPSRTVQRSRR-------RQATEGLCREQTHVPPRRESPGRQLVAVAVVDEPLLRQ 388
              RI +R   RS R       R A   L      + P   SP  + +A  +   P +  
Sbjct: 366 DIERIAARVALRSVRPRELASLRDALAALPALHASLTPLSGSPRARELAAQLAMPPDI-- 423

Query: 387 TQLLAADGEEGEAVGVHEYDLAGRAAGVGLDAE-DEV-AVAVEHREPLAVEEQR 232
            +LLA       AV + +    G     G D+E DE+ A+A +  + L   E R
Sbjct: 424 GELLARAVASEPAVAIRD----GGVIAAGFDSELDELRALATDGGDFLVQLEAR 473

>Q8XAF1:TDCD_ECO57 Propionate kinase - Escherichia coli O157:H7|
          Length = 402

 Score = 32.7 bits (73), Expect = 3.0
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = -3

Query: 720 HGHGQRRLEVWLHHQPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGVRPL 559
           HG   R + +  H        D GL+ AH G+   + A   G+ V+ + G+ PL
Sbjct: 175 HGTSHRYVSLRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPL 228

>Q03989:ARI5A_HUMAN AT-rich interactive domain-containing protein 5A - Homo sapiens|
           (Human)
          Length = 594

 Score = 32.0 bits (71), Expect = 5.2
 Identities = 28/111 (25%), Positives = 42/111 (37%)
 Frame = +1

Query: 319 PREVVLMDADGLALLTVRRKKLSLAEEWLVYDGDGDELAPRRFTARRNMSLLPTKSLCRL 498
           PR+      DG+ L    ++ LS+ E  LV+ GD +  +       R   L P    C +
Sbjct: 359 PRDFFSRLKDGVLLGPPGKEGLSVKEPQLVWGGDANRPSAFHKGGSRKGILYPKPKACWV 418

Query: 499 SPARSLDGTTGDAPGCRYHVEGSYASRSLHMFACTGGNQRRRVATVCRKEA 651
           SP   +   +   P       G  + RSL         +R R  +   KEA
Sbjct: 419 SPMAKVPAESPTLPPTFPSSPGLGSKRSLEEEGAAHSGKRLRAVSPFLKEA 469

>P33485:VNUA_PRVKA Probable nuclear antigen - Pseudorabies virus (strain Kaplan) (PRV)|
          Length = 1733

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 44/146 (30%), Positives = 52/146 (35%), Gaps = 20/146 (13%)
 Frame = -3

Query: 720  HGHGQRRLEVWLHHQPEHVRSDGGL--LPAHRGHAPP---LIAAGA-----GEHVEAATG 571
            HGHG  R+       PE V    G+  +   RGHA      +A G       E VEA  G
Sbjct: 1212 HGHGAHRVR----QGPERVLGGHGVPDVRQRRGHAAGDEGAVAVGRVDPALAELVEALVG 1267

Query: 570  -VRPLHMVPAARRIPSRTVQRSRRRQATEGLCR---------EQTHVPPRRESPGRQLVA 421
             + P  + P         V      +A EGL           E  H P R    GR L  
Sbjct: 1268 GLHPRVLQPGHGLAGGPAVD-----EAHEGLVLLPRVPHLRDEDGHGPGRGAVAGRGLAD 1322

Query: 420  VAVVDEPLLRQTQLLAADGEEGEAVG 343
            V +V EPL        AD   G  VG
Sbjct: 1323 VVLVPEPLAGVPGAAVADAAVGRRVG 1348

>P11868:TDCD_ECOLI Propionate kinase - Escherichia coli|
          Length = 402

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -3

Query: 720 HGHGQRRLEVWLHHQPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGVRPL 559
           HG   R +    H        D GL+ AH G+   + A   G+ V+ + G+ PL
Sbjct: 175 HGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPL 228

>P59244:TDCD_ECOL6 Propionate kinase - Escherichia coli O6|
          Length = 402

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = -3

Query: 720 HGHGQRRLEVWLHHQPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGVRPL 559
           HG   R +    H        D GL+ AH G+   + A   G+ V+ + G+ PL
Sbjct: 175 HGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQSVDTSMGMTPL 228

>Q80TN7:NAV3_MOUSE Neuron navigator 3 - Mus musculus (Mouse)|
          Length = 2359

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = +2

Query: 431  WRPGDSRRGGT*VCSRQSPSVACRRRDRWTVRLGMRLAAGTMWRGRTPVAASTC--SPAP 604
            WR G S +GGT   +RQ  S +  +        G    A    +G+TP+  S+   SP+ 
Sbjct: 990  WRRGMSAQGGTPATARQKTSTSALKTP------GKTDDAKASEKGKTPLKGSSLQRSPSD 1043

Query: 605  AAISGGAWPRCAGRRPPS 658
            A  S G      G++PPS
Sbjct: 1044 AGKSSGD----EGKKPPS 1057

>Q7W880:MUTS_BORPA DNA mismatch repair protein mutS - Bordetella parapertussis|
          Length = 883

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 48/174 (27%), Positives = 67/174 (38%), Gaps = 14/174 (8%)
 Frame = -3

Query: 711 GQRRLEVWLHHQPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGV-----RPLHMVP 547
           G R L  WLHH    +R +  +L      A  L     GE   AA G+       L+  P
Sbjct: 309 GSRLLRRWLHHP---LRENEPVLARQHAIATMLTVRQEGEQAFAAAGLLETLRDALNAFP 365

Query: 546 AARRIPSRTVQRSRR-------RQATEGLCREQTHVPPRRESPGRQLVAVAVVDEPLLRQ 388
              RI +R   RS R       R A   L      + P   SP  + +A  +   P +  
Sbjct: 366 DIERIAARVALRSVRPRELASLRDALVALPALHASLAPLSGSPRARELAAQLAMPPDI-- 423

Query: 387 TQLLAADGEEGEAVGVHEYDLAGRAAGVGLDAE-DEV-AVAVEHREPLAVEEQR 232
            +LLA       AV + +    G     G D+E DE+ A+A +  + L   E R
Sbjct: 424 GELLARAVASEPAVAIRD----GGVIAAGFDSELDELRALATDGGDFLVQLEAR 473

>Q52B63:CWC22_MAGGR Pre-mRNA-splicing factor CWC22 - Magnaporthe grisea (Rice blast|
           fungus) (Pyricularia grisea)
          Length = 907

 Score = 31.6 bits (70), Expect = 6.8
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 549 PAARRIPSRTVQRSRRRQATEGLCREQTHVPPRRESPGRQ 430
           P   R  SR+V RSR R  +  + R  T  PPRR++P +Q
Sbjct: 721 PIRGRSYSRSVSRSRSRSYSRSVSRSPT--PPRRQAPAQQ 758

>Q9GLW0:PRGR_CANFA Progesterone receptor - Canis familiaris (Dog)|
          Length = 939

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 51/191 (26%), Positives = 65/191 (34%), Gaps = 9/191 (4%)
 Frame = -3

Query: 678 QPEHVRSDGGLLPAHRGHAPPLIAAGAGEHVEAATGVRPLHMVPAARRIPSRTVQRSRRR 499
           +PE  R DGG L A +    P +AA A     AA+         AA   PS  +  SRR 
Sbjct: 26  EPESRRRDGGRLRASQTSDAPRVAAAAAAAAAAAS---------AAPSAPSDRLLFSRRG 76

Query: 498 QATEGLCREQTHVP---PRRESPGRQLVAVAVVDEPLLRQTQLLAADGEEGEAVGVHEYD 328
           Q  +   + Q   P     R  P  +  + A  D P   +       G    A+      
Sbjct: 77  QGADPGGKAQDAQPRPDVARADPRLEAASGAGADSPGPPRQDRGPLHGAPSTAL------ 130

Query: 327 LAGRAAGVGLDAEDEVAVAVEHREPLAVEEQRPP--PHGERH----RLPLLLRRWYYCQR 166
              R AG G   +   + A E R P       PP  P G R       PL+ R       
Sbjct: 131 ---RPAGPG---QGRSSPAWEPRSPRCPSGPEPPEDPRGARSSQGAACPLMSRPEGKAGD 184

Query: 165 SCCGVGVHLDP 133
            C   G H  P
Sbjct: 185 GCGTAGAHKGP 195

>P20085:MOBL_THIFE Mobilization protein mobL - Thiobacillus ferrooxidans|
           (Acidithiobacillus ferrooxidans)
          Length = 378

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 26/73 (35%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
 Frame = -3

Query: 636 HRGHAPPLIAAGAGEHVEAATGVRPL-HMVPAARRIPSRTVQRSRR-----RQATEGLCR 475
           H GHA  +       H +      P  H+ PAA  I  RT + SRR     R+A E L R
Sbjct: 209 HHGHAARI---DHRSHAKRGIEAEPTRHLGPAAAGIERRTGEESRRRHDFEREAMERLAR 265

Query: 474 EQTHVPPRRESPG 436
            Q      RES G
Sbjct: 266 AQAQGVLERESRG 278

>O70248:APBA3_RAT Amyloid beta A4 precursor protein-binding family A member 3 -|
           Rattus norvegicus (Rat)
          Length = 569

 Score = 31.2 bits (69), Expect = 8.8
 Identities = 23/77 (29%), Positives = 38/77 (49%)
 Frame = -3

Query: 570 VRPLHMVPAARRIPSRTVQRSRRRQATEGLCREQTHVPPRRESPGRQLVAVAVVDEPLLR 391
           + P+ ++ A RR+  RT  + R+RQ  + LC    HV     S   QL+A A+     + 
Sbjct: 295 IGPVLVLMARRRLAKRTTSQDRQRQLYKMLC----HV---FHSEDAQLIAQAIGQAFSIA 347

Query: 390 QTQLLAADGEEGEAVGV 340
            +Q L  +G +   VG+
Sbjct: 348 YSQFLQENGIDPSQVGM 364


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 207,531,206
Number of extensions: 4888278
Number of successful extensions: 13900
Number of sequences better than 10.0: 14
Number of HSP's gapped: 13886
Number of HSP's successfully gapped: 14
Length of query: 396
Length of database: 100,686,439
Length adjustment: 115
Effective length of query: 281
Effective length of database: 69,142,514
Effective search space: 19429046434
Effective search space used: 19429046434
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)