>Q8LBV4:Y1814_ARATH Uncharacterized methyltransferase At1g78140, chloroplast precursor -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 355
 Score = 38.9 bits (89), Expect = 0.10
 Identities = 28/103 (27%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
 Frame = +2

Query: 932  IDTGCGVASFGAYLLKRD----IIAMSFAPRDTHEAQVQFALERGIP----AILGVMGSL 1087
            ID  CG   F     + D    +IA+ ++     +       E   P     +L      
Sbjct: 187  IDASCGSGMFSRLFTRSDLFSLVIALDYSENMLRQCYELLNKEENFPNKEKLVLVRADIA 246

Query: 1088 RLPYPSRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGGYWI 1216
            RLP+ S + D  H    L  W       +AEI R+LRPGG ++
Sbjct: 247  RLPFLSGSVDAVHAGAALHCWPSPSSA-VAEISRVLRPGGVFV 288

>Q5NII9:APT_FRATT Adenine phosphoribosyltransferase - Francisella tularensis subsp.|
            tularensis
          Length = 175

 Score = 38.9 bits (89), Expect = 0.10
 Identities = 22/56 (39%), Positives = 32/56 (57%)
 Frame = +2

Query: 1859 STYPRTYDLLHADSLFSIYQDRCDITDILLEMDRILRPEGTAIIRDTVDVLTKVQA 2026
            +TY   YDL +      I+QD   +TD +L +D +L   GTA  + TVD++ K QA
Sbjct: 91   ATYSVKYDLEYGSDSLEIHQDAFKVTDEVLVVDDLLATGGTA--KATVDLIEKTQA 144

>O06898:BIOC_ESCVU Biotin synthesis protein bioC - Escherichia vulneris|
          Length = 251

 Score = 38.5 bits (88), Expect = 0.13
 Identities = 30/106 (28%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
 Frame = +2

Query: 896  LISLSDGRIRTAIDTGCGVASFGAYL--LKRDIIAMSFAPRDTHEAQVQFALERGIPAIL 1069
            L  L + R  + +D GCG  S   Y      ++ A+  +     +AQ Q A +  + A +
Sbjct: 35   LAKLGERRPASVLDAGCGPGSMSRYWRDAGAEVTALDLSLPMLRQAQSQQAAQHYVAADI 94

Query: 1070 GVMGSLRLPYPSRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGG 1207
                   LP     FDLA  S   + W    G  L  + R++RPGG
Sbjct: 95   EA-----LPLADARFDLA-WSNLAVQWCNDLGQALKSLHRVVRPGG 134

>Q9RRT0:UBIE_DEIRA Menaquinone biosynthesis methyltransferase ubiE - Deinococcus|
            radiodurans
          Length = 241

 Score = 34.3 bits (77), Expect = 2.5
 Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 4/99 (4%)
 Frame = +2

Query: 923  RTAIDTGCGVASFGAYLLKR----DIIAMSFAPRDTHEAQVQFALERGIPAILGVMGSLR 1090
            R  +D   G   F   L +R    +I+   F P+    A+ Q A  + +        +LR
Sbjct: 59   RRVLDVATGTGDFAIELKERAPQVEIVGSDFVPQMLDLAR-QKAGAKQLSIRFEEGDALR 117

Query: 1091 LPYPSRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGG 1207
            LPYP  +FD   C+     +  +    LAE+ R+L PGG
Sbjct: 118  LPYPDASFDAVTCAFGFRNFADYT-QGLAEMWRVLTPGG 155

>P31764:GAL7_HAEIN Galactose-1-phosphate uridylyltransferase - Haemophilus influenzae|
          Length = 349

 Score = 33.9 bits (76), Expect = 3.3
 Identities = 32/130 (24%), Positives = 53/130 (40%)
 Frame = +2

Query: 1259 WQRTEEDLKREQDKIEDVARSLCWNKVAEKEDLSIWQKPKNHLECADVKKKYKIPHICKS 1438
            WQ  +E +  EQ    D    LC               P N     ++   Y+ P++ K+
Sbjct: 34   WQGQQEKVNEEQKPSYDPTCYLC---------------PSNKRITGELNPDYRKPYVFKN 78

Query: 1439 DNPDAAWYKKMESCLTPLPEVSNQGSIAGGEVARWPKRAFTVPPRVKRGTIPGIDANKFE 1618
            D     +   +E   TP PE S+       + AR   R     P   + T+P + A + E
Sbjct: 79   D-----FSALLED--TPAPEKSSDPLFQSSQ-ARGESRVICFSPDHSK-TLPLLTALEIE 129

Query: 1619 EDMKLWEKRL 1648
            E +K+W+++L
Sbjct: 130  EVIKVWQEQL 139

>Q96WX4:ERG6_PNECA Sterol 24-C-methyltransferase - Pneumocystis carinii|
          Length = 377

 Score = 33.5 bits (75), Expect = 4.3
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
 Frame = +2

Query: 926  TAIDTGCGVASFGAYLLKRDIIAMSFAPRDTHEAQVQ----FALERGIPAILGVMGS--L 1087
            T +D GCGV      +        +    + ++ Q+Q    ++ ++G+   L  +    +
Sbjct: 129  TVLDVGCGVGGPACQISV--FTGANIVGLNNNDYQIQRAKYYSEKKGLSDKLKFIKGDFM 186

Query: 1088 RLPYPSRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGGYW 1213
            ++P+P  +FD  +     I     +G+Y +EI R+L+PGG +
Sbjct: 187  QMPFPENSFDKIYSIEATIHAPSLEGVY-SEIYRVLKPGGLY 227

>P34468:YMH1_CAEEL Uncharacterized protein F58A4.1 - Caenorhabditis elegans|
          Length = 254

 Score = 33.1 bits (74), Expect = 5.6
 Identities = 20/58 (34%), Positives = 27/58 (46%)
 Frame = +3

Query: 1785 QTKTPSEQFTSEGSSALTRTGVKPSRRIREPTIFCTPTVCSASTRTGAT*PTSSWRWT 1958
            +T TP    +S  +S  T T    S      T   TPT  S++T T  + PTSS + T
Sbjct: 86   ETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKAT 143

>Q0WPT7:Y2104_ARATH Uncharacterized methyltransferase At2g41040, chloroplast precursor -|
            Arabidopsis thaliana (Mouse-ear cress)
          Length = 352

 Score = 33.1 bits (74), Expect = 5.6
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 1088 RLPYPSRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGGYWI 1216
            RLP+PS + D  H    L  W       +AEI R+LR GG ++
Sbjct: 249  RLPFPSGSVDAVHAGAALHCWPSPTNA-IAEICRVLRSGGVFV 290

>Q8Y3T4:SYS_LISMO Seryl-tRNA synthetase - Listeria monocytogenes|
          Length = 427

 Score = 33.1 bits (74), Expect = 5.6
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 8/106 (7%)
 Frame = +2

Query: 1463 KKMESCLTPLPEVSNQGSIAGG------EVARWPK-RAFTVPPRVKRGTIPGIDANKFEE 1621
            +K++  L  +P + ++ +  G       E+ +W + RAF   P+        +D   FE 
Sbjct: 95   EKLDMILMSIPNIPHESTPVGESEDDNVEIRKWGEVRAFDFEPKAHWDLGTDLDILDFEN 154

Query: 1622 DMKLWEKRLTYYKRT-TPIAQGRYRNVMDMNANLGGFAASLVKYPV 1756
              K+   R  +YK+    + +     +MD+++N  G+   L  Y V
Sbjct: 155  AAKVTGSRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMV 200

>Q7W0H1:UBIE_BORPE Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -|
            Bordetella pertussis
          Length = 258

 Score = 32.7 bits (73), Expect = 7.3
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
 Frame = +2

Query: 860  HGADAYIDEISKLISLSDGRIRTAIDTGCGVASFGAYLLKRDI------IAMSFAPR--- 1012
            H   +  D ++ L+S    R+  A   G      G  +L  DI      +A +FA R   
Sbjct: 39   HSVASRYDVMNDLMSAGLHRVWKAFTIGRAAVRPGMKVL--DIAGGTGDLARAFAKRAGP 96

Query: 1013 -------DTHEAQVQFALER----GIPAILGVMGSLRLPYPSRAFDLAHCSRCLIPWG-- 1153
                   D +E+ ++   +R    G+     V  + RLP+PS+ FD     R  + +G  
Sbjct: 97   SGEVWLTDINESMLRVGRDRLTDSGLLVPTAVCDAERLPFPSQYFD-----RVSVAFGLR 151

Query: 1154 --GHDGLYLAEIDRILRPGG 1207
               H    LAE+ R+L+PGG
Sbjct: 152  NMTHKDRALAEMTRVLKPGG 171

>Q7W3N6:UBIE_BORPA Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -|
            Bordetella parapertussis
          Length = 258

 Score = 32.7 bits (73), Expect = 7.3
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
 Frame = +2

Query: 860  HGADAYIDEISKLISLSDGRIRTAIDTGCGVASFGAYLLKRDI------IAMSFAPR--- 1012
            H   +  D ++ L+S    R+  A   G      G  +L  DI      +A +FA R   
Sbjct: 39   HSVASRYDVMNDLMSAGLHRVWKAFTIGRAAVRPGMKVL--DIAGGTGDLARAFAKRAGP 96

Query: 1013 -------DTHEAQVQFALER----GIPAILGVMGSLRLPYPSRAFDLAHCSRCLIPWG-- 1153
                   D +E+ ++   +R    G+     V  + RLP+PS+ FD     R  + +G  
Sbjct: 97   SGEVWLTDINESMLRVGRDRLTDSGLLVPTAVCDAERLPFPSQYFD-----RVSVAFGLR 151

Query: 1154 --GHDGLYLAEIDRILRPGG 1207
               H    LAE+ R+L+PGG
Sbjct: 152  NMTHKDRALAEMTRVLKPGG 171

>Q7WF12:UBIE_BORBR Ubiquinone/menaquinone biosynthesis methyltransferase ubiE -|
            Bordetella bronchiseptica (Alcaligenes bronchisepticus)
          Length = 258

 Score = 32.7 bits (73), Expect = 7.3
 Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 24/140 (17%)
 Frame = +2

Query: 860  HGADAYIDEISKLISLSDGRIRTAIDTGCGVASFGAYLLKRDI------IAMSFAPR--- 1012
            H   +  D ++ L+S    R+  A   G      G  +L  DI      +A +FA R   
Sbjct: 39   HSVASRYDVMNDLMSAGLHRVWKAFTIGRAAVRPGMKVL--DIAGGTGDLARAFAKRAGP 96

Query: 1013 -------DTHEAQVQFALER----GIPAILGVMGSLRLPYPSRAFDLAHCSRCLIPWG-- 1153
                   D +E+ ++   +R    G+     V  + RLP+PS+ FD     R  + +G  
Sbjct: 97   SGEVWLTDINESMLRVGRDRLTDSGLLVPTAVCDAERLPFPSQYFD-----RVSVAFGLR 151

Query: 1154 --GHDGLYLAEIDRILRPGG 1207
               H    LAE+ R+L+PGG
Sbjct: 152  NMTHKDRALAEMTRVLKPGG 171

>P36571:BIOC_SERMA Biotin synthesis protein bioC - Serratia marcescens|
          Length = 255

 Score = 32.7 bits (73), Expect = 7.3
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 3/100 (3%)
 Frame = +2

Query: 932  IDTGCGVASFGAYLLKRD--IIAMSFAPRDTHEAQVQFALERGIPAILGVMGSL-RLPYP 1102
            +D GCG   F     +R   + A+  AP     A+ + A    +      +G + ++P P
Sbjct: 51   LDAGCGTGYFSRMWRERGKRVTALDLAPGMLDVARQRQAAHHYL------LGDIEQVPLP 104

Query: 1103 SRAFDLAHCSRCLIPWGGHDGLYLAEIDRILRPGGYWIHS 1222
              A D+   S  ++ W       LAE+ R+ RPGG  + S
Sbjct: 105  DAAMDICFSS-LVVQWCSDLPAALAELYRVTRPGGVILFS 143

>P53934:YNJ2_YEAST Uncharacterized protein YNL092W - Saccharomyces cerevisiae (Baker's|
            yeast)
          Length = 400

 Score = 32.3 bits (72), Expect = 9.5
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 2/109 (1%)
 Frame = +2

Query: 1169 YLAEIDRILRPGGYWIHSGPPINWRTHHNGWQRTEE--DLKREQDKIEDVARSLCWNKVA 1342
            YL  I  +L+PGG W + GP +    + +G + T E       QDKI D    L   +++
Sbjct: 286  YLDTIGHVLKPGGIWCNFGPLLYHFENDHGVETTYEVNPYSGFQDKINDYT-PLMGLELS 344

Query: 1343 EKEDLSIWQKPKNHLECADVKKKYKIPHICKSDNPDAAWYKKMESCLTP 1489
              + +SI     NHL+   ++++  I  +C         Y   ESC  P
Sbjct: 345  SDDIISI---ATNHLDFELIRRESGI--LCGYGR-----YAGPESCAMP 383


  Database: uniprot_sprot.fasta.out
    Posted date:  Jul 19, 2007  5:58 PM
  Number of letters in database: 100,686,439
  Number of sequences in database:  274,295
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 274295
Number of Hits to DB: 455,881,173
Number of extensions: 10717788
Number of successful extensions: 32687
Number of sequences better than 10.0: 14
Number of HSP's gapped: 32482
Number of HSP's successfully gapped: 14
Length of query: 817
Length of database: 100,686,439
Length adjustment: 122
Effective length of query: 695
Effective length of database: 67,222,449
Effective search space: 46719602055
Effective search space used: 46719602055
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)