Clone Name | FLbaf8n24 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_001056242.1| Oryza sativa (japonica cultivar-group) Os03g0275400 (Os03g0275400) mRNA, complete cds Length = 1650 Score = 1011 bits (510), Expect = 0.0 Identities = 901/1030 (87%), Gaps = 1/1030 (0%) Strand = Plus / Plus Query: 253 ggcgtcggagctccaccggttgcggaggtcgccatgggaggtgctgtgctcggcgctggt 312 |||||||| |||||||||| ||||| |||||||||||||||||||||| |||| ||||| Sbjct: 280 ggcgtcggggctccaccggctgcggcggtcgccatgggaggtgctgtggtcggggctggc 339 Query: 313 atcatgcggcctggtgctcttctcgcagctcgccgtggccatagtgccccgcctcttccc 372 || |||||||| |||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 340 ctcctgcggcctcacgctcctctcgcagctcgccgtggccatggtgccccgcctcttccc 399 Query: 373 atccatctccctcctcgccatgctacccgtcgcaggtttggtattcctggtggctattct 432 ||| ||||||||||||||||||| ||||||||||| |||| ||||||| | || | Sbjct: 400 ttccctctccctcctcgccatgctccccgtcgcaggcgtggtgttcctggccgtcatcgt 459 Query: 433 ggtgggcaggttctggaggaggttcatcggagtggccgcgtcggcgcccctgttcgttct 492 |||||||||||||||||||||||||||||||||||| || |||||||| |||||||| || Sbjct: 460 ggtgggcaggttctggaggaggttcatcggagtggcggcatcggcgccgctgttcgtact 519 Query: 493 gttcaacgtgctgtttttgtggggcgtctacgtattcgtcatccggagagatacctcttc 552 ||||||| | || || ||||||||||||||||| || ||||||||| ||| || ||||| Sbjct: 520 gttcaacatcctcttcttgtggggcgtctacgtgtttgtcatccggggaggcacttcttc 579 Query: 553 tctactagacatgctgattaatgctgagtgtgcactgcttctttggggactttacaggat 612 || |||| ||| | ||||||||||| |||||| ||||| | | |||||||||||||| Sbjct: 580 cctgttagatatggtaattaatgctgaatgtgcaatgcttttgtttggactttacaggat 639 Query: 613 tctttctggtgatcccggcattgttgcatacgaatcttcatttttggaagaggctggctg 672 ||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| Sbjct: 640 attttctggtgatcctggcattgtgatctatgaatcttcatttttcgaagaagctggctg 699 Query: 673 caaggatttcgtggatgctatatgctcgagtgagaaatatccatcactctcaagggtgag 732 |||||||| ||||| ||||||||| |||||||||||| | ||||||| ||||||| || Sbjct: 700 taaggattttgtggaagctatatgcccgagtgagaaattttcatcacttccaagggtaag 759 Query: 733 gaattgtaactgttgcaaagcagatgttagaggttatgaccaccattgccctgcatttgg 792 | | |||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 760 gcactgtaactgctgcaaagcaaatgttagaggttatgatcaccattgtcctgcatttgg 819 Query: 793 taactgcataggacagaaaaaccacaggctatttatggcacttttgacaggatttgttgt 852 ||||||||||||||||||||| || |||| |||||||| ||||||||||| |||||||| Sbjct: 820 taactgcataggacagaaaaatcatcggctgtttatggcccttttgacaggctttgttgt 879 Query: 853 tgctgaatcgacatatacaatgtgttcaactaaatatataactagatgcataacttcagg 912 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || Sbjct: 880 cgctgaatcgacatatacaatgtgttcaactaaatatatcactagatgcataaattctgg 939 Query: 913 aactttaagaactgagaatcatttttctctaaacatggtgattggcacaatgctcttctc 972 |||| ||||| | ||||||| | | ||| | |||||||| || ||||||||||||||||| Sbjct: 940 aactataagatcggagaatcctatgtctgttaacatggtaatcggcacaatgctcttctc 999 Query: 973 agtcctccaagtgttatggcaggttgtgttcctgatatggcatgtgtacggcatctgctt 1032 || ||||||||| | ||||||| ||||||| |||||||||| | || |||||||||| Sbjct: 1000 tgttctccaagtgctctggcaggctgtgttcttgatatggcacatatattgcatctgctt 1059 Query: 1033 caacatcaggacagatgagtgggtaatgtcaaatttcccatgctttggactctttcttca 1092 |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1060 caacatcaagacagatgagtgggtaatgtcaaacttcccatgctttggactcttccttca 1119 Query: 1093 ccaattgcaggtcgtcttctcgtttgctgtttcttatagctaagaggtgagatttatcca 1152 |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1120 tcaattgcaggccatcttctcgtttgctgtttcttatagctaagaggtgagattt-tcca 1178 Query: 1153 gataaactggaagaaatatcctgaattccaaatgaaggaacagcctcagtcagattttga 1212 |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| || Sbjct: 1179 gataaactggaagaaataccctgaattccagatgaaggaacagcctcaatcagattctgg 1238 Query: 1213 agtcaagtttgtcaatccatacgacaaaggcatactttgtaacattagggagttcctgaa 1272 ||| |||||||| |||||||| ||||||||| | || |||||||||| || || ||||| Sbjct: 1239 agtaaagtttgtgaatccatatgacaaaggcgtgctctgtaacattatagaatttctgaa 1298 Query: 1273 gccgaaataa 1282 |||||||||| Sbjct: 1299 gccgaaataa 1308 Score = 56.0 bits (28), Expect = 4e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcgagttctccactaagattcg-cccgcatctccttcgattc 92 |||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | ||||||| Sbjct: 39 gttcgacgaaatgcccacgcgagtacgccactaagattcgccccgcatctacgtcgattc 98
>dbj|AK120743.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004D13, full insert sequence Length = 1652 Score = 1011 bits (510), Expect = 0.0 Identities = 901/1030 (87%), Gaps = 1/1030 (0%) Strand = Plus / Plus Query: 253 ggcgtcggagctccaccggttgcggaggtcgccatgggaggtgctgtgctcggcgctggt 312 |||||||| |||||||||| ||||| |||||||||||||||||||||| |||| ||||| Sbjct: 281 ggcgtcggggctccaccggctgcggcggtcgccatgggaggtgctgtggtcggggctggc 340 Query: 313 atcatgcggcctggtgctcttctcgcagctcgccgtggccatagtgccccgcctcttccc 372 || |||||||| |||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 341 ctcctgcggcctcacgctcctctcgcagctcgccgtggccatggtgccccgcctcttccc 400 Query: 373 atccatctccctcctcgccatgctacccgtcgcaggtttggtattcctggtggctattct 432 ||| ||||||||||||||||||| ||||||||||| |||| ||||||| | || | Sbjct: 401 ttccctctccctcctcgccatgctccccgtcgcaggcgtggtgttcctggccgtcatcgt 460 Query: 433 ggtgggcaggttctggaggaggttcatcggagtggccgcgtcggcgcccctgttcgttct 492 |||||||||||||||||||||||||||||||||||| || |||||||| |||||||| || Sbjct: 461 ggtgggcaggttctggaggaggttcatcggagtggcggcatcggcgccgctgttcgtact 520 Query: 493 gttcaacgtgctgtttttgtggggcgtctacgtattcgtcatccggagagatacctcttc 552 ||||||| | || || ||||||||||||||||| || ||||||||| ||| || ||||| Sbjct: 521 gttcaacatcctcttcttgtggggcgtctacgtgtttgtcatccggggaggcacttcttc 580 Query: 553 tctactagacatgctgattaatgctgagtgtgcactgcttctttggggactttacaggat 612 || |||| ||| | ||||||||||| |||||| ||||| | | |||||||||||||| Sbjct: 581 cctgttagatatggtaattaatgctgaatgtgcaatgcttttgtttggactttacaggat 640 Query: 613 tctttctggtgatcccggcattgttgcatacgaatcttcatttttggaagaggctggctg 672 ||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| Sbjct: 641 attttctggtgatcctggcattgtgatctatgaatcttcatttttcgaagaagctggctg 700 Query: 673 caaggatttcgtggatgctatatgctcgagtgagaaatatccatcactctcaagggtgag 732 |||||||| ||||| ||||||||| |||||||||||| | ||||||| ||||||| || Sbjct: 701 taaggattttgtggaagctatatgcccgagtgagaaattttcatcacttccaagggtaag 760 Query: 733 gaattgtaactgttgcaaagcagatgttagaggttatgaccaccattgccctgcatttgg 792 | | |||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||| Sbjct: 761 gcactgtaactgctgcaaagcaaatgttagaggttatgatcaccattgtcctgcatttgg 820 Query: 793 taactgcataggacagaaaaaccacaggctatttatggcacttttgacaggatttgttgt 852 ||||||||||||||||||||| || |||| |||||||| ||||||||||| |||||||| Sbjct: 821 taactgcataggacagaaaaatcatcggctgtttatggcccttttgacaggctttgttgt 880 Query: 853 tgctgaatcgacatatacaatgtgttcaactaaatatataactagatgcataacttcagg 912 |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| || Sbjct: 881 cgctgaatcgacatatacaatgtgttcaactaaatatatcactagatgcataaattctgg 940 Query: 913 aactttaagaactgagaatcatttttctctaaacatggtgattggcacaatgctcttctc 972 |||| ||||| | ||||||| | | ||| | |||||||| || ||||||||||||||||| Sbjct: 941 aactataagatcggagaatcctatgtctgttaacatggtaatcggcacaatgctcttctc 1000 Query: 973 agtcctccaagtgttatggcaggttgtgttcctgatatggcatgtgtacggcatctgctt 1032 || ||||||||| | ||||||| ||||||| |||||||||| | || |||||||||| Sbjct: 1001 tgttctccaagtgctctggcaggctgtgttcttgatatggcacatatattgcatctgctt 1060 Query: 1033 caacatcaggacagatgagtgggtaatgtcaaatttcccatgctttggactctttcttca 1092 |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 1061 caacatcaagacagatgagtgggtaatgtcaaacttcccatgctttggactcttccttca 1120 Query: 1093 ccaattgcaggtcgtcttctcgtttgctgtttcttatagctaagaggtgagatttatcca 1152 |||||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1121 tcaattgcaggccatcttctcgtttgctgtttcttatagctaagaggtgagattt-tcca 1179 Query: 1153 gataaactggaagaaatatcctgaattccaaatgaaggaacagcctcagtcagattttga 1212 |||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| || Sbjct: 1180 gataaactggaagaaataccctgaattccagatgaaggaacagcctcaatcagattctgg 1239 Query: 1213 agtcaagtttgtcaatccatacgacaaaggcatactttgtaacattagggagttcctgaa 1272 ||| |||||||| |||||||| ||||||||| | || |||||||||| || || ||||| Sbjct: 1240 agtaaagtttgtgaatccatatgacaaaggcgtgctctgtaacattatagaatttctgaa 1299 Query: 1273 gccgaaataa 1282 |||||||||| Sbjct: 1300 gccgaaataa 1309 Score = 56.0 bits (28), Expect = 4e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcgagttctccactaagattcg-cccgcatctccttcgattc 92 |||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | ||||||| Sbjct: 40 gttcgacgaaatgcccacgcgagtacgccactaagattcgccccgcatctacgtcgattc 99
>gb|AY106412.1| Zea mays PCO070860 mRNA sequence Length = 1070 Score = 478 bits (241), Expect = e-131 Identities = 672/816 (82%), Gaps = 6/816 (0%) Strand = Plus / Plus Query: 229 ggagttctcggcgatgagcaggctggcgtcggagctccaccggttgcggaggtcgccat- 287 ||||||| ||||||||||||||| ||||||| |||||| || |||||||||||| | | Sbjct: 255 ggagttcgaggcgatgagcaggcttgcgtcggggctccagcgcttgcggaggtcgtcgtc 314 Query: 288 -----gggaggtgctgtgctcggcgctggtatcatgcggcctggtgctcttctcgcagct 342 ||||||||||||| |||||||| | ||||||||||| ||||| ||||||||||| Sbjct: 315 gcagtgggaggtgctgtggtcggcgctcgcgtcatgcggcctagtgcttttctcgcagct 374 Query: 343 cgccgtggccatagtgccccgcctcttcccatccatctccctcctcgccatgctacccgt 402 ||||||||| || || ||||| |||||||| | | ||||||||||||| ||||| ||| | Sbjct: 375 cgccgtggcgatggttccccgtctcttccctttcctctccctcctcgcgatgctccccat 434 Query: 403 cgcaggtttggtattcctggtggctattctggtgggcaggttctggaggaggttcatcgg 462 ||| || ||||| ||| | | |||||| || | ||| | | ||||||||||||||||| Sbjct: 435 cgcggggttggtgttcatcgcggctatcgtgctcggccgcctgtggaggaggttcatcgg 494 Query: 463 agtggccgcgtcggcgcccctgttcgttctgttcaacgtgctgtttttgtggggcgtcta 522 ||||| |||||||| || || ||||| || |||||| | || | ||||||||||| || Sbjct: 495 ggtggcggcgtcggccccgctcttcgtgctcttcaacatcctcctattgtggggcgttta 554 Query: 523 cgtattcgtcatccggagagatacctcttctctactagacatgctgattaatgctgagtg 582 ||||||||| ||||||||||| || |||||||| || |||||||| || ||||| ||||| Sbjct: 555 cgtattcgtaatccggagagaaacttcttctctgctggacatgctaataaatgcagagtg 614 Query: 583 tgcactgcttctttggggactttacaggattctttctggtgatcccggcattgttgcata 642 |||||| ||||| |||||| | ||||||||| | ||||||||||| || |||||||| | Sbjct: 615 tgcacttcttctgtggggattctacaggattttatctggtgatcctggtattgttgcttg 674 Query: 643 cgaatcttcatttttggaagaggctggctgcaaggatttcgtggatgctatatgctcgag 702 || ||||||| ||||||||| ||||||||||||||||| ||||| ||||||| |||||| Sbjct: 675 tgattcttcatatttggaagaagctggctgcaaggattttgtggaagctatatactcgag 734 Query: 703 tgagaaatatccatcactctcaagggtgaggaattgtaactgttgcaaagcagatgttag 762 ||||||| ||| ||||||||||| ||| | |||| ||| ||||||||| | |||| Sbjct: 735 tgagaaactcccaatgctctcaagggtcaggcagtgtacctggtgcaaagcaaacattag 794 Query: 763 aggttatgaccaccattgccctgcatttggtaactgcataggacagaaaaaccacaggct 822 || |||||||| ||||| ||||||||||||| ||||||||||||||||| || | || Sbjct: 795 gggctatgaccatcattgtcctgcatttggtacttgcataggacagaaaaatcatcgtct 854 Query: 823 atttatggcacttttgacaggatttgttgttgctgaatcgacatatacaatgtgttcaac 882 ||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||| Sbjct: 855 atttatggcccttttgacaggatttgttgttgctgaatcaacatatacgatgtgctcaac 914 Query: 883 taaatatataactagatgcataacttcaggaactttaagaactgagaatcatttttctct 942 |||||||| || |||||||| | |||||| ||| ||||| | ||||||| | | ||| | Sbjct: 915 aaaatatattaccagatgcatcagttcagggactataagatcggagaatcctgtatcttt 974 Query: 943 aaacatggtgattggcacaatgctcttctcagtcctccaagtgttatggcaggttgtgtt 1002 |||||| || || | |||| ||||||||| ||||||| || | |||||| |||| || Sbjct: 975 aaacatagtaatcagtacaacgctcttctctatcctccaggtcctctggcagattgtatt 1034 Query: 1003 cctgatatggcatgtgtacggcatctgcttcaacat 1038 | |||| ||||| | || |||||||||||||||| Sbjct: 1035 cttgatgtggcacatatattgcatctgcttcaacat 1070
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3 Length = 36192742 Score = 280 bits (141), Expect = 1e-71 Identities = 193/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Plus Query: 997 tgtgttcctgatatggcatgtgtacggcatctgcttcaacatcaggacagatgagtgggt 1056 ||||||| |||||||||| | || |||||||||||||||||| ||||||||||||||| Sbjct: 9281641 tgtgttcttgatatggcacatatattgcatctgcttcaacatcaagacagatgagtgggt 9281700 Query: 1057 aatgtcaaatttcccatgctttggactctttcttcaccaattgcaggtcgtcttctcgtt 1116 ||||||||| |||||||||||||||||||| ||||| |||||||||| | |||||||||| Sbjct: 9281701 aatgtcaaacttcccatgctttggactcttccttcatcaattgcaggccatcttctcgtt 9281760 Query: 1117 tgctgtttcttatagctaagaggtgagatttatccagataaactggaagaaatatcctga 1176 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 9281761 tgctgtttcttatagctaagaggtgagattt-tccagataaactggaagaaataccctga 9281819 Query: 1177 attccaaatgaaggaacagcctcagtcag 1205 |||||| ||||||||||||||||| |||| Sbjct: 9281820 attccagatgaaggaacagcctcaatcag 9281848 Score = 186 bits (94), Expect = 2e-43 Identities = 142/158 (89%) Strand = Plus / Plus Query: 253 ggcgtcggagctccaccggttgcggaggtcgccatgggaggtgctgtgctcggcgctggt 312 |||||||| |||||||||| ||||| |||||||||||||||||||||| |||| ||||| Sbjct: 9277895 ggcgtcggggctccaccggctgcggcggtcgccatgggaggtgctgtggtcggggctggc 9277954 Query: 313 atcatgcggcctggtgctcttctcgcagctcgccgtggccatagtgccccgcctcttccc 372 || |||||||| |||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 9277955 ctcctgcggcctcacgctcctctcgcagctcgccgtggccatggtgccccgcctcttccc 9278014 Query: 373 atccatctccctcctcgccatgctacccgtcgcaggtt 410 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 9278015 ttccctctccctcctcgccatgctccccgtcgcaggtt 9278052 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Plus Query: 432 tggtgggcaggttctggaggaggttcatcggagtggccgcgtcggcgcccctgttcgttc 491 ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| | Sbjct: 9278164 tggtgggcaggttctggaggaggttcatcggagtggcggcatcggcgccgctgttcgtac 9278223 Query: 492 tgttcaacgtgctgtttttgtggggcgtctacgtattcgtcatccgg 538 |||||||| | || || ||||||||||||||||| || ||||||||| Sbjct: 9278224 tgttcaacatcctcttcttgtggggcgtctacgtgtttgtcatccgg 9278270 Score = 115 bits (58), Expect = 5e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 802 aggacagaaaaaccacaggctatttatggcacttttgacaggatttgttgttgctgaatc 861 |||||||||||| || |||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 9279335 aggacagaaaaatcatcggctgtttatggcccttttgacaggctttgttgtcgctgaatc 9279394 Query: 862 gacatatacaatgtgttcaactaaat 887 |||||||||||||||||||||||||| Sbjct: 9279395 gacatatacaatgtgttcaactaaat 9279420 Score = 111 bits (56), Expect = 7e-21 Identities = 89/100 (89%) Strand = Plus / Plus Query: 705 agaaatatccatcactctcaagggtgaggaattgtaactgttgcaaagcagatgttagag 764 |||||| | ||||||| ||||||| ||| | |||||||| ||||||||| ||||||||| Sbjct: 9279154 agaaattttcatcacttccaagggtaaggcactgtaactgctgcaaagcaaatgttagag 9279213 Query: 765 gttatgaccaccattgccctgcatttggtaactgcatagg 804 ||||||| |||||||| ||||||||||||||||||||||| Sbjct: 9279214 gttatgatcaccattgtcctgcatttggtaactgcatagg 9279253 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Plus Query: 615 tttctggtgatcccggcattgttgcatacgaatcttcatttttggaagaggctggctgca 674 ||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 9278953 tttctggtgatcctggcattgtgatctatgaatcttcatttttcgaagaagctggctgta 9279012 Query: 675 aggatttcgtggatgctatatgctcgagtgag 706 ||||||| ||||| ||||||||| |||||||| Sbjct: 9279013 aggattttgtggaagctatatgcccgagtgag 9279044 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Plus Query: 1203 cagattttgaagtcaagtttgtcaatccatacgacaaaggcatactttgtaacattaggg 1262 |||||| || ||| |||||||| |||||||| ||||||||| | || |||||||||| | Sbjct: 9281923 cagattctggagtaaagtttgtgaatccatatgacaaaggcgtgctctgtaacattatag 9281982 Query: 1263 agttcctgaagccgaaataa 1282 | || ||||||||||||||| Sbjct: 9281983 aatttctgaagccgaaataa 9282002 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Plus Query: 944 aacatggtgattggcacaatgctcttctcagtcctccaagtgttatggcaggtt 997 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||| Sbjct: 9280329 aacatggtaatcggcacaatgctcttctctgttctccaagtgctctggcaggtt 9280382 Score = 56.0 bits (28), Expect = 4e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcgagttctccactaagattcg-cccgcatctccttcgattc 92 |||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | ||||||| Sbjct: 9277654 gttcgacgaaatgcccacgcgagtacgccactaagattcgccccgcatctacgtcgattc 9277713
>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032O19, from chromosome 3, complete sequence Length = 142248 Score = 280 bits (141), Expect = 1e-71 Identities = 193/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 997 tgtgttcctgatatggcatgtgtacggcatctgcttcaacatcaggacagatgagtgggt 1056 ||||||| |||||||||| | || |||||||||||||||||| ||||||||||||||| Sbjct: 2583 tgtgttcttgatatggcacatatattgcatctgcttcaacatcaagacagatgagtgggt 2524 Query: 1057 aatgtcaaatttcccatgctttggactctttcttcaccaattgcaggtcgtcttctcgtt 1116 ||||||||| |||||||||||||||||||| ||||| |||||||||| | |||||||||| Sbjct: 2523 aatgtcaaacttcccatgctttggactcttccttcatcaattgcaggccatcttctcgtt 2464 Query: 1117 tgctgtttcttatagctaagaggtgagatttatccagataaactggaagaaatatcctga 1176 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 2463 tgctgtttcttatagctaagaggtgagattt-tccagataaactggaagaaataccctga 2405 Query: 1177 attccaaatgaaggaacagcctcagtcag 1205 |||||| ||||||||||||||||| |||| Sbjct: 2404 attccagatgaaggaacagcctcaatcag 2376 Score = 186 bits (94), Expect = 2e-43 Identities = 142/158 (89%) Strand = Plus / Minus Query: 253 ggcgtcggagctccaccggttgcggaggtcgccatgggaggtgctgtgctcggcgctggt 312 |||||||| |||||||||| ||||| |||||||||||||||||||||| |||| ||||| Sbjct: 6329 ggcgtcggggctccaccggctgcggcggtcgccatgggaggtgctgtggtcggggctggc 6270 Query: 313 atcatgcggcctggtgctcttctcgcagctcgccgtggccatagtgccccgcctcttccc 372 || |||||||| |||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 6269 ctcctgcggcctcacgctcctctcgcagctcgccgtggccatggtgccccgcctcttccc 6210 Query: 373 atccatctccctcctcgccatgctacccgtcgcaggtt 410 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 6209 ttccctctccctcctcgccatgctccccgtcgcaggtt 6172 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Minus Query: 432 tggtgggcaggttctggaggaggttcatcggagtggccgcgtcggcgcccctgttcgttc 491 ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| | Sbjct: 6060 tggtgggcaggttctggaggaggttcatcggagtggcggcatcggcgccgctgttcgtac 6001 Query: 492 tgttcaacgtgctgtttttgtggggcgtctacgtattcgtcatccgg 538 |||||||| | || || ||||||||||||||||| || ||||||||| Sbjct: 6000 tgttcaacatcctcttcttgtggggcgtctacgtgtttgtcatccgg 5954 Score = 115 bits (58), Expect = 5e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 802 aggacagaaaaaccacaggctatttatggcacttttgacaggatttgttgttgctgaatc 861 |||||||||||| || |||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 4889 aggacagaaaaatcatcggctgtttatggcccttttgacaggctttgttgtcgctgaatc 4830 Query: 862 gacatatacaatgtgttcaactaaat 887 |||||||||||||||||||||||||| Sbjct: 4829 gacatatacaatgtgttcaactaaat 4804 Score = 111 bits (56), Expect = 7e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 705 agaaatatccatcactctcaagggtgaggaattgtaactgttgcaaagcagatgttagag 764 |||||| | ||||||| ||||||| ||| | |||||||| ||||||||| ||||||||| Sbjct: 5070 agaaattttcatcacttccaagggtaaggcactgtaactgctgcaaagcaaatgttagag 5011 Query: 765 gttatgaccaccattgccctgcatttggtaactgcatagg 804 ||||||| |||||||| ||||||||||||||||||||||| Sbjct: 5010 gttatgatcaccattgtcctgcatttggtaactgcatagg 4971 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Minus Query: 615 tttctggtgatcccggcattgttgcatacgaatcttcatttttggaagaggctggctgca 674 ||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 5271 tttctggtgatcctggcattgtgatctatgaatcttcatttttcgaagaagctggctgta 5212 Query: 675 aggatttcgtggatgctatatgctcgagtgag 706 ||||||| ||||| ||||||||| |||||||| Sbjct: 5211 aggattttgtggaagctatatgcccgagtgag 5180 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1203 cagattttgaagtcaagtttgtcaatccatacgacaaaggcatactttgtaacattaggg 1262 |||||| || ||| |||||||| |||||||| ||||||||| | || |||||||||| | Sbjct: 2301 cagattctggagtaaagtttgtgaatccatatgacaaaggcgtgctctgtaacattatag 2242 Query: 1263 agttcctgaagccgaaataa 1282 | || ||||||||||||||| Sbjct: 2241 aatttctgaagccgaaataa 2222 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 944 aacatggtgattggcacaatgctcttctcagtcctccaagtgttatggcaggtt 997 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||| Sbjct: 3895 aacatggtaatcggcacaatgctcttctctgttctccaagtgctctggcaggtt 3842 Score = 56.0 bits (28), Expect = 4e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcgagttctccactaagattcg-cccgcatctccttcgattc 92 |||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | ||||||| Sbjct: 6570 gttcgacgaaatgcccacgcgagtacgccactaagattcgccccgcatctacgtcgattc 6511
>gb|AC137698.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0014A21, from chromosome 3, complete sequence Length = 134014 Score = 280 bits (141), Expect = 1e-71 Identities = 193/209 (92%), Gaps = 1/209 (0%) Strand = Plus / Minus Query: 997 tgtgttcctgatatggcatgtgtacggcatctgcttcaacatcaggacagatgagtgggt 1056 ||||||| |||||||||| | || |||||||||||||||||| ||||||||||||||| Sbjct: 72445 tgtgttcttgatatggcacatatattgcatctgcttcaacatcaagacagatgagtgggt 72386 Query: 1057 aatgtcaaatttcccatgctttggactctttcttcaccaattgcaggtcgtcttctcgtt 1116 ||||||||| |||||||||||||||||||| ||||| |||||||||| | |||||||||| Sbjct: 72385 aatgtcaaacttcccatgctttggactcttccttcatcaattgcaggccatcttctcgtt 72326 Query: 1117 tgctgtttcttatagctaagaggtgagatttatccagataaactggaagaaatatcctga 1176 ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| Sbjct: 72325 tgctgtttcttatagctaagaggtgagattt-tccagataaactggaagaaataccctga 72267 Query: 1177 attccaaatgaaggaacagcctcagtcag 1205 |||||| ||||||||||||||||| |||| Sbjct: 72266 attccagatgaaggaacagcctcaatcag 72238 Score = 186 bits (94), Expect = 2e-43 Identities = 142/158 (89%) Strand = Plus / Minus Query: 253 ggcgtcggagctccaccggttgcggaggtcgccatgggaggtgctgtgctcggcgctggt 312 |||||||| |||||||||| ||||| |||||||||||||||||||||| |||| ||||| Sbjct: 76191 ggcgtcggggctccaccggctgcggcggtcgccatgggaggtgctgtggtcggggctggc 76132 Query: 313 atcatgcggcctggtgctcttctcgcagctcgccgtggccatagtgccccgcctcttccc 372 || |||||||| |||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 76131 ctcctgcggcctcacgctcctctcgcagctcgccgtggccatggtgccccgcctcttccc 76072 Query: 373 atccatctccctcctcgccatgctacccgtcgcaggtt 410 ||| ||||||||||||||||||| ||||||||||||| Sbjct: 76071 ttccctctccctcctcgccatgctccccgtcgcaggtt 76034 Score = 133 bits (67), Expect = 2e-27 Identities = 97/107 (90%) Strand = Plus / Minus Query: 432 tggtgggcaggttctggaggaggttcatcggagtggccgcgtcggcgcccctgttcgttc 491 ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| | Sbjct: 75922 tggtgggcaggttctggaggaggttcatcggagtggcggcatcggcgccgctgttcgtac 75863 Query: 492 tgttcaacgtgctgtttttgtggggcgtctacgtattcgtcatccgg 538 |||||||| | || || ||||||||||||||||| || ||||||||| Sbjct: 75862 tgttcaacatcctcttcttgtggggcgtctacgtgtttgtcatccgg 75816 Score = 115 bits (58), Expect = 5e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 802 aggacagaaaaaccacaggctatttatggcacttttgacaggatttgttgttgctgaatc 861 |||||||||||| || |||| |||||||| ||||||||||| |||||||| |||||||| Sbjct: 74751 aggacagaaaaatcatcggctgtttatggcccttttgacaggctttgttgtcgctgaatc 74692 Query: 862 gacatatacaatgtgttcaactaaat 887 |||||||||||||||||||||||||| Sbjct: 74691 gacatatacaatgtgttcaactaaat 74666 Score = 111 bits (56), Expect = 7e-21 Identities = 89/100 (89%) Strand = Plus / Minus Query: 705 agaaatatccatcactctcaagggtgaggaattgtaactgttgcaaagcagatgttagag 764 |||||| | ||||||| ||||||| ||| | |||||||| ||||||||| ||||||||| Sbjct: 74932 agaaattttcatcacttccaagggtaaggcactgtaactgctgcaaagcaaatgttagag 74873 Query: 765 gttatgaccaccattgccctgcatttggtaactgcatagg 804 ||||||| |||||||| ||||||||||||||||||||||| Sbjct: 74872 gttatgatcaccattgtcctgcatttggtaactgcatagg 74833 Score = 87.7 bits (44), Expect = 1e-13 Identities = 80/92 (86%) Strand = Plus / Minus Query: 615 tttctggtgatcccggcattgttgcatacgaatcttcatttttggaagaggctggctgca 674 ||||||||||||| |||||||| || |||||||||||||| ||||| |||||||| | Sbjct: 75133 tttctggtgatcctggcattgtgatctatgaatcttcatttttcgaagaagctggctgta 75074 Query: 675 aggatttcgtggatgctatatgctcgagtgag 706 ||||||| ||||| ||||||||| |||||||| Sbjct: 75073 aggattttgtggaagctatatgcccgagtgag 75042 Score = 63.9 bits (32), Expect = 2e-06 Identities = 68/80 (85%) Strand = Plus / Minus Query: 1203 cagattttgaagtcaagtttgtcaatccatacgacaaaggcatactttgtaacattaggg 1262 |||||| || ||| |||||||| |||||||| ||||||||| | || |||||||||| | Sbjct: 72163 cagattctggagtaaagtttgtgaatccatatgacaaaggcgtgctctgtaacattatag 72104 Query: 1263 agttcctgaagccgaaataa 1282 | || ||||||||||||||| Sbjct: 72103 aatttctgaagccgaaataa 72084 Score = 60.0 bits (30), Expect = 2e-05 Identities = 48/54 (88%) Strand = Plus / Minus Query: 944 aacatggtgattggcacaatgctcttctcagtcctccaagtgttatggcaggtt 997 |||||||| || ||||||||||||||||| || ||||||||| | ||||||||| Sbjct: 73757 aacatggtaatcggcacaatgctcttctctgttctccaagtgctctggcaggtt 73704 Score = 56.0 bits (28), Expect = 4e-04 Identities = 53/60 (88%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcgagttctccactaagattcg-cccgcatctccttcgattc 92 |||||||||||| ||| ||||||| | ||||||||||||| ||||||||| | ||||||| Sbjct: 76432 gttcgacgaaatgcccacgcgagtacgccactaagattcgccccgcatctacgtcgattc 76373
>gb|AC190320.7| Mus musculus BAC RP24-328D3 () complete sequence Length = 171842 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1008 tatggcatgtgtacggcatctg 1029 |||||||||||||||||||||| Sbjct: 136909 tatggcatgtgtacggcatctg 136888
>ref|XM_874126.1| PREDICTED: Bos taurus similar to Mothers against decapentaplegic homolog 3 (SMAD 3) (Mothers against DPP homolog 3) (Mad3), transcript variant 13 (LOC515125), mRNA Length = 1672 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1178 ttccaaatgaaggaacagcctc 1199 |||||||||||||||||||||| Sbjct: 1021 ttccaaatgaaggaacagcctc 1042
>ref|XM_873567.1| PREDICTED: Bos taurus similar to Mothers against decapentaplegic homolog 3 (SMAD 3) (Mothers against DPP homolog 3) (Mad3), transcript variant 7 (LOC515125), mRNA Length = 1549 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1178 ttccaaatgaaggaacagcctc 1199 |||||||||||||||||||||| Sbjct: 898 ttccaaatgaaggaacagcctc 919
>gb|AC155946.7| Mus musculus 6 BAC RP24-483K3 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 178502 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1008 tatggcatgtgtacggcatctg 1029 |||||||||||||||||||||| Sbjct: 153811 tatggcatgtgtacggcatctg 153832
>gb|AY052775.1| Bos taurus organic anion transporting polypeptide 1a2 variant 1 mRNA, complete cds Length = 2316 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 ttcgattctttcctcagtttct 106 |||||||||||||||||||||| Sbjct: 278 ttcgattctttcctcagtttct 257
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 649 ttcatttttggaagaggctggctgca 674 |||||||||||||| ||||||||||| Sbjct: 28005355 ttcatttttggaagtggctggctgca 28005380
>gb|AC158651.12| Mus musculus BAC RP24-68I7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 190089 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1008 tatggcatgtgtacggcatctg 1029 |||||||||||||||||||||| Sbjct: 54733 tatggcatgtgtacggcatctg 54754
>dbj|AP003335.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1144G04 Length = 194459 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 649 ttcatttttggaagaggctggctgca 674 |||||||||||||| ||||||||||| Sbjct: 192036 ttcatttttggaagtggctggctgca 192061
>dbj|AP004363.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0019E03 Length = 152092 Score = 44.1 bits (22), Expect = 1.4 Identities = 25/26 (96%) Strand = Plus / Plus Query: 649 ttcatttttggaagaggctggctgca 674 |||||||||||||| ||||||||||| Sbjct: 20554 ttcatttttggaagtggctggctgca 20579
>ref|NM_174654.2| Bos taurus organic anion transporting polypeptide 1a2 (SLCO1A2), mRNA emb|AJ508718.1|BTA508718 Bos taurus mRNA for organic anion transporting polypeptide 1a2 (SLCO1A2 gene) Length = 3504 Score = 44.1 bits (22), Expect = 1.4 Identities = 22/22 (100%) Strand = Plus / Minus Query: 85 ttcgattctttcctcagtttct 106 |||||||||||||||||||||| Sbjct: 194 ttcgattctttcctcagtttct 173
>ref|NM_001072409.1| Oryza sativa (japonica cultivar-group) Os11g0175300 (Os11g0175300) mRNA, complete cds Length = 1926 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 939 gttcgacgaaattcccccgcg 959
>ref|NM_001072408.1| Oryza sativa (japonica cultivar-group) Os11g0175000 (Os11g0175000) mRNA, complete cds Length = 1704 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 722 gttcgacgaaattcccccgcg 742
>ref|XM_001075704.1| PREDICTED: Rattus norvegicus S100 calcium binding protein A16 (predicted) (S100a16_predicted), mRNA Length = 1114 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1067 ttcccatgctttggactctttcttc 1091 |||||||||||| |||||||||||| Sbjct: 595 ttcccatgcttttgactctttcttc 619
>ref|XM_342291.3| PREDICTED: Rattus norvegicus S100 calcium binding protein A16 (predicted) (S100a16_predicted), mRNA Length = 1114 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1067 ttcccatgctttggactctttcttc 1091 |||||||||||| |||||||||||| Sbjct: 595 ttcccatgcttttgactctttcttc 619
>gb|AC113474.18| Mus musculus chromosome 5, clone RP23-297J17, complete sequence Length = 219936 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1236 acaaaggcatactttgtaacattag 1260 ||||||||||||| ||||||||||| Sbjct: 56458 acaaaggcatactgtgtaacattag 56434
>gb|AC165426.3| Mus musculus BAC clone RP23-157G2 from chromosome 5, complete sequence Length = 245594 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 964 gctcttctcagtcctccaagt 984 ||||||||||||||||||||| Sbjct: 24578 gctcttctcagtcctccaagt 24598
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 70952 gttcgacgaaattcccccgcg 70932 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 86166 gttcgacgaaattcccccgcg 86146
>gb|AC113970.8| Mus musculus chromosome 1, clone RP23-125E16, complete sequence Length = 235703 Score = 42.1 bits (21), Expect = 5.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1183 aatgaaggaacagcctcagtcagattttg 1211 ||||||| ||||| ||||||||||||||| Sbjct: 166022 aatgaagcaacaggctcagtcagattttg 166050
>gb|AC123049.4| Mus musculus BAC clone RP24-360B3 from chromosome 5, complete sequence Length = 166292 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 964 gctcttctcagtcctccaagt 984 ||||||||||||||||||||| Sbjct: 131322 gctcttctcagtcctccaagt 131342
>dbj|AK157353.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830212C20 product:unclassifiable, full insert sequence Length = 1824 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1236 acaaaggcatactttgtaacattag 1260 ||||||||||||| ||||||||||| Sbjct: 1388 acaaaggcatactgtgtaacattag 1364
>emb|CR753839.12| Zebrafish DNA sequence from clone CH211-12K18 in linkage group 14, complete sequence Length = 169064 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1200 agtcagattttgaagtcaagt 1220 ||||||||||||||||||||| Sbjct: 114915 agtcagattttgaagtcaagt 114895
>ref|XM_961087.1| Plasmodium falciparum 3D7 long-chain fatty-acid Co-A ligase / oxalyl Co-A decarboxylase (PFF0945c) partial mRNA Length = 4179 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1428 atgagaagttaacattatttgaaaa 1452 |||| |||||||||||||||||||| Sbjct: 2291 atgaaaagttaacattatttgaaaa 2315
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11 Length = 28386948 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 3703280 gttcgacgaaattcccccgcg 3703260 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 3718494 gttcgacgaaattcccccgcg 3718474
>emb|AL356575.8| Human DNA sequence from clone RP11-340C20 on chromosome 13 Contains part of the PCCA gene for propionyl Coenzyme A carboxylase alpha polypeptide, and a ribosomal protein L15 (RPL15) pseudogene, complete sequence Length = 158527 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 aactggaagaaatatcctgaa 1177 ||||||||||||||||||||| Sbjct: 11346 aactggaagaaatatcctgaa 11366
>emb|CR382400.1| Plasmodium falciparum chromosome 6, complete sequence; segment 3/5 Length = 348034 Score = 42.1 bits (21), Expect = 5.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1428 atgagaagttaacattatttgaaaa 1452 |||| |||||||||||||||||||| Sbjct: 124462 atgaaaagttaacattatttgaaaa 124438
>gb|AY035787.1|Y035786S02 Homo sapiens propionyl-CoA carboxylase alpha polypeptide precursor (PCCA) gene, exon 2 Length = 238 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1157 aactggaagaaatatcctgaa 1177 ||||||||||||||||||||| Sbjct: 4 aactggaagaaatatcctgaa 24
>emb|CR392335.5| Zebrafish DNA sequence from clone CH211-161C21 in linkage group 1, complete sequence Length = 103171 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1200 agtcagattttgaagtcaagt 1220 ||||||||||||||||||||| Sbjct: 89103 agtcagattttgaagtcaagt 89083
>gb|AC124905.3| Equus caballus clone CH241-184O19, complete sequence Length = 171209 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 883 taaatatataactagatgcat 903 ||||||||||||||||||||| Sbjct: 150054 taaatatataactagatgcat 150034
>dbj|AK109815.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-H07, full insert sequence Length = 1703 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 722 gttcgacgaaattcccccgcg 742
>dbj|AK072817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141L10, full insert sequence Length = 1927 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 34 gttcgacgaaattcccccgcg 54 ||||||||||||||||||||| Sbjct: 939 gttcgacgaaattcccccgcg 959
>emb|CT030637.9| Mouse DNA sequence from clone RP23-123H11 on chromosome 14, complete sequence Length = 239552 Score = 42.1 bits (21), Expect = 5.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 gtgggcaggttctggaggagg 454 ||||||||||||||||||||| Sbjct: 8502 gtgggcaggttctggaggagg 8522 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 263,742,023 Number of extensions: 13605312 Number of successful extensions: 250693 Number of sequences better than 10.0: 37 Number of HSP's gapped: 250677 Number of HSP's successfully gapped: 72 Length of query: 1468 Length of database: 18,610,659,111 Length adjustment: 23 Effective length of query: 1445 Effective length of database: 18,503,978,556 Effective search space: 26738249013420 Effective search space used: 26738249013420 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)