Clone Name | FLbaf8m01 |
---|---|
Clone Library Name | barley_pub |
>Q7XBQ9:RGA2_SOLBU Disease resistance protein RGA2 - Solanum bulbocastanum (Wild potato)| Length = 970 Score = 47.0 bits (110), Expect = 4e-04 Identities = 47/202 (23%), Positives = 79/202 (39%), Gaps = 32/202 (15%) Frame = +2 Query: 1271 MFGRHTEKQKLLNFVLQHSPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRSHFTSILH 1450 ++GR EK +++ ++ + +VLP++G +GK TL + D+RV HF S + Sbjct: 151 VYGRDKEKDEIVKILINNVSDAQHLSVLPILGMGGLGKTTLAQMVFNDQRVTEHFHSKIW 210 Query: 1451 LNGDSICRLADHD------------------------------RSLLSGNT-LXXXXXXX 1537 IC D D + LL+G L Sbjct: 211 -----ICVSEDFDEKRLIKAIVESIEGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVW 265 Query: 1538 XXXXXXWAKFHSTLASMDSGSKVIIISRL-RSSERLGTVKPIFLNTPSYEEFSYLFKTLT 1714 WA + L SG+ V+ +RL + +GT++P L+ S E+ LF Sbjct: 266 NEDQQKWANLRAVLKVGASGASVLTTTRLEKVGSIMGTLQPYELSNLSQEDCWLLFMQRA 325 Query: 1715 FRGANPVQHPRLAQIADQLARE 1780 F G +P L I ++ ++ Sbjct: 326 F-GHQEEINPNLVAIGKEIVKK 346
>Q7XA40:RGA3_SOLBU Putative disease resistance protein RGA3 - Solanum bulbocastanum| (Wild potato) Length = 992 Score = 44.7 bits (104), Expect = 0.002 Identities = 47/238 (19%), Positives = 93/238 (39%), Gaps = 26/238 (10%) Frame = +2 Query: 1145 LQGMLESLEDVVASMTEFVVLLGGCDRMLPRPYDAYLYTGNIMFGRHTEKQKLLNFVLQH 1324 ++ M+E L+ + F + +R R ++ T ++GR E+ +++ ++ + Sbjct: 109 MKEMMEKLDAIAEERRNFHLDERIIERQAARRQTGFVLTEPKVYGREKEEDEIVKILINN 168 Query: 1325 SPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRSHF-------------------TSIL 1447 VLP++G +GK TL + D+R+ HF + Sbjct: 169 VSYSEEVPVLPILGMGGLGKTTLAQMVFNDQRITEHFNLKIWVCVSDDFDEKRLIKAIVE 228 Query: 1448 HLNGDS-----ICRLADHDRSLLSGNT-LXXXXXXXXXXXXXWAKFHSTLASMDSGSKVI 1609 + G S + L + LL+G W + L SG+ ++ Sbjct: 229 SIEGKSLGDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASIL 288 Query: 1610 IISRL-RSSERLGTVKPIFLNTPSYEEFSYLFKTLTFRGANPVQHPRLAQIADQLARE 1780 I +RL + +GT++ L+ S E+ LFK F P+L +I ++ ++ Sbjct: 289 ITTRLEKIGSIMGTLQLYQLSNLSQEDCWLLFKQRAFCHQTETS-PKLMEIGKEIVKK 345
>Q7XA39:RGA4_SOLBU Putative disease resistance protein RGA4 - Solanum bulbocastanum| (Wild potato) Length = 988 Score = 43.1 bits (100), Expect = 0.006 Identities = 42/203 (20%), Positives = 78/203 (38%), Gaps = 26/203 (12%) Frame = +2 Query: 1250 YLYTGNIMFGRHTEKQKLLNFVLQHSPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRS 1429 ++ T ++GR E+ +++ ++ + V P+IG +GK TL I DERV Sbjct: 146 FVLTEPKVYGRDKEEDEIVKILINNVNVAEELPVFPIIGMGGLGKTTLAQMIFNDERVTK 205 Query: 1430 HFTSILHL------------------------NGDSICRLADHDRSLLSGNT-LXXXXXX 1534 HF + + + + + + LL+G L Sbjct: 206 HFNPKIWVCVSDDFDEKRLIKTIIGNIERSSPHVEDLASFQKKLQELLNGKRYLLVLDDV 265 Query: 1535 XXXXXXXWAKFHSTLASMDSGSKVIIISRL-RSSERLGTVKPIFLNTPSYEEFSYLFKTL 1711 WAK + L G+ ++ +RL + +GT++P L+ S + LF Sbjct: 266 WNDDLEKWAKLRAVLTVGARGASILATTRLEKVGSIMGTLQPYHLSNLSPHDSLLLFMQR 325 Query: 1712 TFRGANPVQHPRLAQIADQLARE 1780 F G +P L I ++ ++ Sbjct: 326 AF-GQQKEANPNLVAIGKEIVKK 347
>Q7XA42:RGA1_SOLBU Putative disease resistance protein RGA1 - Solanum bulbocastanum| (Wild potato) Length = 979 Score = 41.2 bits (95), Expect = 0.022 Identities = 45/199 (22%), Positives = 80/199 (40%), Gaps = 29/199 (14%) Frame = +2 Query: 1271 MFGRHTEKQKLLNFVLQHSPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRSHF----- 1435 ++GR EK +++ ++ + +VLP++G +GK TL + D+RV F Sbjct: 151 VYGRDKEKDEIVKILINTASDAQKLSVLPILGMGGLGKTTLSQMVFNDQRVTERFYPKIW 210 Query: 1436 --------------TSILHLNGDSICRLADHD--------RSLLSGNT-LXXXXXXXXXX 1546 + + G S L+D D + LL+G Sbjct: 211 ICISDDFNEKRLIKAIVESIEGKS---LSDMDLAPLQKKLQELLNGKRYFLVLDDVWNED 267 Query: 1547 XXXWAKFHSTLASMDSGSKVIIISRL-RSSERLGTVKPIFLNTPSYEEFSYLFKTLTFRG 1723 WA + L SG+ V+ +RL + +GT++P L+ S E+ +LF F G Sbjct: 268 QHKWANLRAVLKVGASGAFVLTTTRLEKVGSIMGTLQPYELSNLSPEDCWFLFMQRAF-G 326 Query: 1724 ANPVQHPRLAQIADQLARE 1780 +P L I ++ ++ Sbjct: 327 HQEEINPNLMAIGKEIVKK 345
>Q9LRR5:DRL21_ARATH Putative disease resistance protein At3g14460 - Arabidopsis thaliana| (Mouse-ear cress) Length = 1424 Score = 39.3 bits (90), Expect = 0.082 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 1/56 (1%) Frame = +2 Query: 1271 MFGRHTEKQKLLNFVLQHSPPGC-TPAVLPVIGAPAVGKRTLVAHICKDERVRSHF 1435 + GR +K L+N +L PAV+ V+G P VGK TL + D RV HF Sbjct: 168 LVGRVEDKLALVNLLLSDDEISIGKPAVISVVGMPGVGKTTLTEIVFNDYRVTEHF 223
>Q9LRR4:R13L1_ARATH Putative disease resistance RPP13-like protein 1 - Arabidopsis| thaliana (Mouse-ear cress) Length = 1054 Score = 37.0 bits (84), Expect = 0.41 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +2 Query: 1271 MFGRHTEKQKLLNFVLQHSPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRSHF 1435 +FGR +K +++ F++ + V+ ++G VGK TL + D+ VRS+F Sbjct: 172 VFGRDDDKDEIMRFLIPENGKDNGITVVAIVGIGGVGKTTLSQLLYNDQHVRSYF 226
>Q39214:RPM1_ARATH Disease resistance protein RPM1 - Arabidopsis thaliana (Mouse-ear| cress) Length = 926 Score = 34.7 bits (78), Expect = 2.0 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +2 Query: 1256 YTGNIMFGRHTEKQKLLNFVLQHSPPGCTPAVLPVIGAPAVGKRTLVAHICKDERVRSHF 1435 ++ N + G K KL+ +L P V+ V+G GK TL A+I K + VR HF Sbjct: 167 FSENSLVGIDAPKGKLIGRLLSPEPQRI---VVAVVGMGGSGKTTLSANIFKSQSVRRHF 223 Query: 1436 TS 1441 S Sbjct: 224 ES 225
>P01267:THYG_BOVIN Thyroglobulin precursor - Bos taurus (Bovine)| Length = 2769 Score = 34.7 bits (78), Expect = 2.0 Identities = 21/56 (37%), Positives = 27/56 (48%) Frame = -1 Query: 1866 MPRQKWTSRFLPNKSANMFMATSDHSVRNSLASWSAICANRGCCTGFAPLNVSVLK 1699 +P QK T + NK + SD S+ + +C CCTGF LNVS LK Sbjct: 1969 LPFQKLTGISIRNK-----VPMSDKSISSGFFECERLCDMDPCCTGFGFLNVSQLK 2019
>P11268:ENV_MLVRD Envelope glycoprotein precursor - Radiation murine leukemia virus| Length = 665 Score = 33.1 bits (74), Expect = 5.9 Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 7/37 (18%) Frame = -2 Query: 1172 PPSSPACLAGRQGTRPCCSWHCHEP-------CEDVW 1083 PP P C +G G+ P CS C EP C W Sbjct: 97 PPPGPPCCSGSSGSTPGCSRDCEEPLTSYTPRCNTAW 133
>O93375:COE2_DANRE Transcription factor COE2 - Danio rerio (Zebrafish) (Brachydanio| rerio) Length = 579 Score = 32.7 bits (73), Expect = 7.7 Identities = 18/46 (39%), Positives = 22/46 (47%) Frame = +2 Query: 1979 PNASPLCIMPSCTSGSSRTEVTTERASLPRVRLGDLMMDPGVRPQG 2116 PN+SP IMPS GSS + +S P P +RPQG Sbjct: 508 PNSSPYAIMPSSPPGSSSSSSLLPFSSFPSSTKQKSAFAPVLRPQG 553 Database: uniprot_sprot.fasta.out Posted date: Jul 19, 2007 5:58 PM Number of letters in database: 100,686,439 Number of sequences in database: 274,295 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 274295 Number of Hits to DB: 469,521,821 Number of extensions: 11020819 Number of successful extensions: 33387 Number of sequences better than 10.0: 10 Number of HSP's gapped: 33365 Number of HSP's successfully gapped: 10 Length of query: 857 Length of database: 100,686,439 Length adjustment: 122 Effective length of query: 735 Effective length of database: 67,222,449 Effective search space: 49408500015 Effective search space used: 49408500015 Neighboring words threshold: 12 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)