Clone Information

BLAST Search Result

Clone Name	FLbaf8l20
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LOC_Os05g24970:12005.t02154:unspliced-genomic small nuclear ...	92	1e-45
2	LOC_Os01g73604:12001.t06640:unspliced-genomic sm protein	91	1e-37
3	LOC_Os05g07220:12005.t00610:unspliced-genomic kelch motif fa...	34	0.039
4	LOC_Os03g16718:12003.t01454:unspliced-genomic hypothetical p...	37	0.11
5	LOC_Os12g40020:12012.t03681:unspliced-genomic retrotransposo...	36	0.21
6	LOC_Os03g15470:12003.t01333:unspliced-genomic hypothetical p...	36	0.21
7	LOC_Os08g44830:12008.t04206:unspliced-genomic zinc finger pr...	35	0.39
8	LOC_Os07g07220:12007.t00600:unspliced-genomic small nuclear ...	35	0.54
9	LOC_Os05g10650:12005.t00899:unspliced-genomic 6-phosphofruct...	29	0.81
10	LOC_Os05g46110:12005.t04099:unspliced-genomic retrotransposo...	34	1.0
11	LOC_Os03g38510:12003.t03293:unspliced-genomic hypothetical p...	34	1.0
12	LOC_Os02g08540:12002.t00750:unspliced-genomic expressed protein	34	1.0
13	LOC_Os05g51740:12005.t04599:unspliced-genomic receptor prote...	28	1.0
14	LOC_Os02g16290:12002.t01422:unspliced-genomic transposon pro...	32	1.2
15	LOC_Os04g54810:12004.t04954:unspliced-genomic beta-D-xylosid...	33	2.1
16	LOC_Os02g50820:12002.t04666:unspliced-genomic permease I, pu...	33	2.6
17	LOC_Os08g42750:12008.t04004:unspliced-genomic calcium-depend...	32	3.6
18	LOC_Os06g13140:12006.t01189:unspliced-genomic nucleotide bin...	32	3.6
19	LOC_Os05g30480:12005.t02647:unspliced-genomic luminal-bindin...	32	3.6
20	LOC_Os01g42294:12001.t03748:unspliced-genomic atypical recep...	27	4.4
21	LOC_Os02g14220:12002.t01217:unspliced-genomic retrotransposo...	27	4.5
22	LOC_Os11g35400:12011.t03087:unspliced-genomic acyl CoA synth...	32	5.0
23	LOC_Os08g02850:12008.t00179:unspliced-genomic ubiquitin-prot...	32	5.0
24	LOC_Os02g54140:12002.t04993:unspliced-genomic 17.5 kDa class...	32	5.0
25	LOC_Os02g54090:12002.t04988:unspliced-genomic expressed protein	32	5.0
26	LOC_Os02g52220:12002.t04803:unspliced-genomic ATP binding pr...	32	5.0
27	LOC_Os01g47670:12001.t04213:unspliced-genomic expressed protein	32	5.0
28	LOC_Os01g14490:12001.t01307:unspliced-genomic retrotransposo...	32	5.0
29	LOC_Os02g31960:12002.t02839:unspliced-genomic ATP/GTP bindin...	26	5.9
30	LOC_Os10g28420:12010.t02194:unspliced-genomic IQ calmodulin-...	26	6.6
31	LOC_Os11g43140:12011.t03844:unspliced-genomic expressed protein	31	6.8
32	LOC_Os10g35630:12010.t02855:unspliced-genomic expressed protein	31	6.8
33	LOC_Os07g30170:12007.t02707:unspliced-genomic beta-ureidopro...	31	6.8
34	LOC_Os07g09000:12007.t00775:unspliced-genomic sec12-like pro...	31	6.8
35	LOC_Os03g14900:12003.t01276:unspliced-genomic disease resist...	31	6.8
36	LOC_Os02g48830:12002.t04467:unspliced-genomic microtubule-as...	31	6.8
37	LOC_Os02g56219:12002.t005596:unspliced-genomic N-acetyltrans...	31	6.8
38	LOC_Os01g60860:12001.t05467:unspliced-genomic spotted leaf p...	29	6.9
39	LOC_Os08g36590:12008.t03398:unspliced-genomic expressed protein	28	8.0
40	LOC_Os06g44140:12006.t04102:unspliced-genomic transmembrane ...	26	8.0
41	LOC_Os09g29830:12009.t02661:unspliced-genomic DNA binding pr...	31	9.3
42	LOC_Os09g26420:12009.t02321:unspliced-genomic ethylene respo...	31	9.3
43	LOC_Os07g23720:12007.t02069:unspliced-genomic protein bindin...	31	9.3
44	LOC_Os05g48220:12005.t04256:unspliced-genomic 60S ribosomal ...	31	9.3
45	LOC_Os04g01250:12004.t00026:unspliced-genomic glutamyl-tRNA,...	31	9.3
46	LOC_Os03g29380:12003.t02561:unspliced-genomic conserved hypo...	31	9.3
47	LOC_Os01g72600:12001.t06548:unspliced-genomic spotted leaf p...	31	9.3
48	LOC_Os01g24680:12001.t02188:unspliced-genomic glyoxysomal fa...	31	9.3
49	LOC_Os03g29810:12003.t02594:unspliced-genomic ATP-dependent ...	31	9.4
50	LOC_Os08g24410:12008.t02211:unspliced-genomic retrotransposo...	26	9.9

>LOC_Os05g24970:12005.t02154:unspliced-genomic small nuclear ribonucleoprotein Sm D2, putative, expressed|
          Length = 2809
 Score = 92.3 bits (195), Expect(3) = 1e-45
 Identities = 39/40 (97%), Positives = 40/40 (100%)
 Frame = +1 / +2

                                                    
Query: 304  EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 423
            +VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK*
Sbjct: 2252 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 2371



 Score = 90.9 bits (192), Expect(3) = 1e-45
 Identities = 36/43 (83%), Positives = 40/43 (93%)
 Frame = +1 / +3

                                                       
Query: 181  SVKNNTQVLINCRNNKKLLGRMRAFDRHCNMVLENVREMWTEV 309
            S+ ++  VLINCRNNKKLLGR+RAFDRHCNMVLENVREMWTEV
Sbjct: 2043 SIYSSF*VLINCRNNKKLLGRVRAFDRHCNMVLENVREMWTEV 2171



 Score = 45.5 bits (93), Expect(3) = 1e-45
 Identities = 17/25 (68%), Positives = 21/25 (84%)
 Frame = +3 / +1

                                    
Query: 129 EEGGGGVQHRAPVPAHDERQEQYPG 203
           EEGGGG+Q+ A V A DER+EQ+PG
Sbjct: 379 EEGGGGIQYGAAVRADDEREEQHPG 453



 Score = 91.3 bits (193), Expect(3) = 2e-38
 Identities = 37/41 (90%), Positives = 38/41 (92%)
 Frame = -2 / -2

                                                     
Query: 428  LNHLGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 306
            + H GFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 2376 ITHFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 2254



 Score = 73.5 bits (154), Expect(3) = 2e-38
 Identities = 33/36 (91%), Positives = 34/36 (94%)
 Frame = -2 / -1

                                                
Query: 308  TSVHISLTFSRTMLQ*RSNALMRPSSFLLFRQLIST 201
            TSVHISLTFSRTMLQ RSNAL RPS+FLLFRQLIST
Sbjct: 2170 TSVHISLTFSRTMLQWRSNALTRPSNFLLFRQLIST 2063



 Score = 39.1 bits (79), Expect(3) = 2e-38
 Identities = 15/19 (78%), Positives = 16/19 (84%)
 Frame = -2 / -2

                              
Query: 203 TWVLFLTLIMSRDRGPVLN 147
           TWVLF TLI+S D GPVLN
Sbjct: 453 TWVLFFTLIISTDSGPVLN 397



 Score = 73.9 bits (155), Expect(3) = 7e-32
 Identities = 28/39 (71%), Positives = 32/39 (82%)
 Frame = +3 / +1

                                                   
Query: 306  GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPQM 422
            G+KDW RQEEG SSEQGQVH QDVP    GHHC++EP+M
Sbjct: 2254 GTKDW*RQEEGSSSEQGQVH*QDVPTWGFGHHCAQEPEM 2370



 Score = 63.8 bits (133), Expect(3) = 7e-32
 Identities = 28/44 (63%), Positives = 32/44 (72%)
 Frame = +2 / +1

                                                        
Query: 194  IPRYLSTAGTTRSYLVA*EHLTVIATWFSRTLGRCGLRFQRLAK 325
            + R LS AGTTRS LV * HL  IATWF R LGRCGLR+  L++
Sbjct: 2056 LSRCLSIAGTTRSCLVV*GHLIAIATWFLRMLGRCGLRYMVLSE 2187



 Score = 44.1 bits (90), Expect(3) = 7e-32
 Identities = 18/19 (94%), Positives = 19/19 (100%)
 Frame = +1 / +2

                              
Query: 148 FSTGPLSLLMMSVKNNTQV 204
           FSTGPLS+LMMSVKNNTQV
Sbjct: 398 FSTGPLSVLMMSVKNNTQV 454



 Score = 72.5 bits (152), Expect(3) = 4e-28
 Identities = 27/36 (75%), Positives = 32/36 (88%)
 Frame = -1 / -3

                                                
Query: 306  LSPHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYL 199
            LSPHLPN+L+NHVAM +KC H TK LLVVPA+DK+L
Sbjct: 2168 LSPHLPNILKNHVAMAIKCPHTTKQLLVVPAIDKHL 2061



 Score = 60.6 bits (126), Expect(3) = 4e-28
 Identities = 28/37 (75%), Positives = 29/37 (78%)
 Frame = -3 / -3

                                                 
Query: 415  GSLEQ**PSRRGGTSC**TCPCSLEGPSSCLCQSLEP 305
            GS  Q**P+   GTSC**TCPCSLE PSSCL QSL P
Sbjct: 2363 GS*AQ**PNPHVGTSC**TCPCSLEEPSSCLYQSLVP 2253



 Score = 35.9 bits (72), Expect(3) = 4e-28
 Identities = 17/25 (68%), Positives = 17/25 (68%)
 Frame = -3 / -3

                                    
Query: 202 PGYCS*RSS*AGTGARC*TPPPPSS 128
           PG CS RSS A T A  * PPPPSS
Sbjct: 452 PGCCSSRSSSARTAAPY*IPPPPSS 378



 Score = 78.0 bits (164), Expect(2) = 2e-16
 Identities = 32/50 (64%), Positives = 37/50 (74%)
 Frame = -1 / -1

                                                              
Query: 423  SFGVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLEN 274
            SF VP +NDDR+   EHLA+EPVLVHWK LLLAF SLW L    P +L+N
Sbjct: 2371 SFRVPEHNDDRIPT*EHLANEPVLVHWKSLLLAFTSLWYLQQEKPMLLKN 2222



 Score = 30.9 bits (61), Expect(2) = 2e-16
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -1 / -1

                             
Query: 201 LGIVLDAHHEQGQGPGAE 148
           LG+VL AHH+ GQ P  E
Sbjct: 451 LGVVLHAHHQHGQRPRTE 398



 Score = 63.8 bits (133), Expect = 1e-09
 Identities = 26/36 (72%), Positives = 28/36 (77%)
 Frame = -3 / -2

                                                
Query: 307  PQSTSP*RSREPCCNDGQMLSCDQVASCCSGS**VP 200
            PQSTSP* S+EPCCN  QM S DQ  SCCSG+** P
Sbjct: 2169 PQSTSP*HSQEPCCNGDQMPSHDQATSCCSGN**AP 2062



 Score = 60.2 bits (125), Expect = 1e-08
 Identities = 27/37 (72%), Positives = 28/37 (75%)
 Frame = +3 / +2

                                                 
Query: 201  GTYQLPEQQEATWSHESI*PSLQHGSRER*GDVD*GS 311
            G YQLPEQQE  WS E I*  LQHGS E *GDVD*G+
Sbjct: 2063 GAYQLPEQQEVAWSCEGI*SPLQHGS*EC*GDVD*GT 2173

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>LOC_Os01g73604:12001.t06640:unspliced-genomic sm protein|
          Length = 6089

 Score = 90.9 bits (192), Expect(2) = 1e-37
 Identities = 38/40 (95%), Positives = 40/40 (100%)
 Frame = +1 / +3

                                                    
Query: 304  EVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK* 423
            +VPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVL+NPK*
Sbjct: 5970 QVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLKNPK* 6089



 Score = 85.8 bits (181), Expect(2) = 1e-37
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = +1 / +1

                                                
Query: 202  VLINCRNNKKLLGRMRAFDRHCNMVLENVREMWTEV 309
            VLINC+NNKKLLGR+RAFD HCNMVLENVREMWTEV
Sbjct: 5776 VLINCQNNKKLLGRVRAFDSHCNMVLENVREMWTEV 5883



 Score = 90.4 bits (191), Expect(2) = 9e-32
 Identities = 37/39 (94%), Positives = 37/39 (94%)
 Frame = -2 / -2

                                                   
Query: 422  HLGFLRTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 306
            H GFL TMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT
Sbjct: 6088 HFGFLSTMMTESPRRNILLMNLSLFTGRAFFLPLPVFGT 5972



 Score = 66.6 bits (139), Expect(2) = 9e-32
 Identities = 31/36 (86%), Positives = 32/36 (88%)
 Frame = -2 / -1

                                                
Query: 308  TSVHISLTFSRTMLQ*RSNALMRPSSFLLFRQLIST 201
            TSVHISLTFSRTMLQ  SNAL RPS+FLLF QLIST
Sbjct: 5882 TSVHISLTFSRTMLQWLSNALTRPSNFLLFWQLIST 5775



 Score = 78.0 bits (164), Expect(2) = 3e-24
 Identities = 29/39 (74%), Positives = 34/39 (87%)
 Frame = +3 / +2

                                                   
Query: 306  GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPQM 422
            G+KDW RQEEG SSEQGQVHQQDVP   LGHHC+++P+M
Sbjct: 5972 GTKDW*RQEEGSSSEQGQVHQQDVPTWGLGHHCAQKPEM 6088



 Score = 53.8 bits (111), Expect(2) = 3e-24
 Identities = 24/41 (58%), Positives = 27/41 (65%)
 Frame = +2 / +2

                                                     
Query: 194  IPRYLSTAGTTRSYLVA*EHLTVIATWFSRTLGRCGLRFQR 316
            + R LS A TTRSY V * HL  IATWF R  GRCG R+ +
Sbjct: 5768 LSRCLSIARTTRSY*VV*GHLIAIATWFLRMSGRCGPRYMQ 5890



 Score = 69.3 bits (145), Expect(2) = 4e-24
 Identities = 30/40 (75%), Positives = 31/40 (77%)
 Frame = -1 / -1

                                                    
Query: 423  SFGVP*NNDDRVAAEEHLADEPVLVHWKGLLLAFASLWNL 304
            SF V  +NDDRV   EHLADEPVLVHWK LLLAF SLW L
Sbjct: 6089 SFRVFEHNDDRVPT*EHLADEPVLVHWKSLLLAFTSLWYL 5970



 Score = 62.0 bits (129), Expect(2) = 4e-24
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = -1 / -3

                                                
Query: 306  LSPHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYL 199
            L PHLP++L+NHVAM +KC H T *LLVV A+DK+L
Sbjct: 5880 LGPHLPDILKNHVAMAIKCPHTT**LLVVLAIDKHL 5773



 Score = 59.7 bits (124), Expect(2) = 1e-20
 Identities = 27/33 (81%), Positives = 27/33 (81%)
 Frame = -3 / -3

                                             
Query: 403  Q**PSRRGGTSC**TCPCSLEGPSSCLCQSLEP 305
            Q**PS   GTSC**TCPCSLE PSSCL QSL P
Sbjct: 6069 Q**PSPHVGTSC**TCPCSLEEPSSCLYQSLVP 5971



 Score = 59.7 bits (124), Expect(2) = 1e-20
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = -3 / -2

                                                
Query: 307  PQSTSP*RSREPCCNDGQMLSCDQVASCCSGS**VP 200
            P+STSP* S+EPCCN  QM S D V SCCSG+** P
Sbjct: 5881 PRSTSP*HSQEPCCNGYQMPSHDLVTSCCSGN**AP 5774



 Score = 50.1 bits (103), Expect = 2e-05
 Identities = 25/37 (67%), Positives = 26/37 (70%)
 Frame = +3 / +3

                                                 
Query: 201  GTYQLPEQQEATWSHESI*PSLQHGSRER*GDVD*GS 311
            G YQLPEQQE T S E I*  LQHGS E  GDVD G+
Sbjct: 5775 GAYQLPEQQEVTRSCEGI**PLQHGS*ECQGDVDRGT 5885

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>LOC_Os05g07220:12005.t00610:unspliced-genomic kelch motif family protein, expressed|
          Length = 6464

 Score = 34.1 bits (68), Expect(2) = 0.039
 Identities = 22/62 (35%), Positives = 29/62 (46%)
 Frame = -1 / -2

                                                                        
Query: 390  VAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSHATK*LLVVPAV 211
            V  + H+A +    HW   L A  +L     H P VL+ HVA+  K  H    L V  A+
Sbjct: 3043 VVLQVHIALDKEGSHWAVFLQAHVALDKKGLHWPVVLQVHVALDKKGLHWPVVLQVHIAL 2864

              
Query: 210  DK 205
            DK
Sbjct: 2863 DK 2858



 Score = 22.1 bits (42), Expect(2) = 0.039
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1 / -3

                    
Query: 129  HIGSCFFR 106
            HIG CFFR
Sbjct: 2748 HIGLCFFR 2725



 Score = 34.1 bits (68), Expect = 1.0
 Identities = 20/62 (32%), Positives = 31/62 (50%)
 Frame = -1 / -2

                                                                        
Query: 390  VAAEEHLADEPVLVHWKGLLLAFASLWNLSPHLPNVLENHVAMTVKCSHATK*LLVVPAV 211
            V  + H+A +   +HW  +L    +L     H P VL+ H+A+  + SH    L V  A+
Sbjct: 2992 VFLQAHVALDKKGLHWPVVLQVHVALDKKGLHWPVVLQVHIALDKEGSHWPVFLQVHVAL 2813

              
Query: 210  DK 205
            DK
Sbjct: 2812 DK 2807

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>LOC_Os03g16718:12003.t01454:unspliced-genomic hypothetical protein|
          Length = 4072

 Score = 37.3 bits (75), Expect = 0.11
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -3 / +1

                                                     
Query: 340 GPSSCLCQSLEPQSTSP*RSREPCCNDGQMLSCDQVASCCSG 215
           GPSS LC    P S+SP   R P  + G+ L+   V + C G
Sbjct: 412 GPSSDLCSRPPPSSSSPVAGRRPPRSGGRSLTSSVVVAGCGG 537

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>LOC_Os12g40020:12012.t03681:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 1146

 Score = 36.3 bits (73), Expect = 0.21
 Identities = 16/37 (43%), Positives = 20/37 (54%)
 Frame = +3 / +3

                                                 
Query: 306  GSKDWQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEP 416
            G   WQRQ    S ++ Q  QQ+   R LGH CS +P
Sbjct: 966  GRSWWQRQRSRRSRQRRQRKQQEQQRRWLGHVCSTQP 1076

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>LOC_Os03g15470:12003.t01333:unspliced-genomic hypothetical protein|
          Length = 696

 Score = 36.3 bits (73), Expect = 0.21
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3 / +1

                                                     
Query: 340 GPSSCLCQSLEPQSTSP*RSREPCCNDGQMLSCDQVASCCSG 215
           GP S LC    P S+SP     P C+ G+ L+   V + C G
Sbjct: 358 GPFSDLCSRPPPSSSSPVAGYRPPCSGGRSLTSSVVEAGCGG 483

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>LOC_Os08g44830:12008.t04206:unspliced-genomic zinc finger protein, putative, expressed|
          Length = 4153

 Score = 35.4 bits (71), Expect = 0.39
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -3 / +1

                                              
Query: 391  SRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSP 290
            S    T C  TCPCS  G SSC      P  T+P
Sbjct: 2803 SSHSATRCSTTCPCSRTGCSSCTRSLASPSPTTP 2904

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>LOC_Os07g07220:12007.t00600:unspliced-genomic small nuclear ribonucleoprotein-associated protein B, putative,|
           expressed
          Length = 2382

 Score = 35.0 bits (70), Expect = 0.54
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = +1 / +3

                                             
Query: 193 NTQVLINCRNNKKLLGRMRAFDRHCNMVLENVRE 294
           N ++ +  ++ ++L+G+  AFDRH N+VL +  E
Sbjct: 147 NYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEE 248

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>LOC_Os05g10650:12005.t00899:unspliced-genomic 6-phosphofructokinase 2, putative, expressed|
          Length = 2281

 Score = 28.6 bits (56), Expect(2) = 0.81
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3 / +3

                          
Query: 102 DGGRSSCQCEEGGGG 146
           +GGR  C+C + GGG
Sbjct: 198 NGGRHGCRCSDSGGG 242



 Score = 26.7 bits (52), Expect(2) = 0.81
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3 / +3

                                    
Query: 144 GVQHRAPVPAHDERQEQYPGTYQLP 218
           G +H A  P H + + Q+PG +  P
Sbjct: 894 GARHVARRPGHGQDRRQHPGPWHQP 968

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>LOC_Os05g46110:12005.t04099:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 3327

 Score = 34.1 bits (68), Expect = 1.0
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = -3 / +1

                                  
Query: 160  ARC*TPPPPSSHWQLLLPPSAR 95
            ARC +PP P++H QLL PP  R
Sbjct: 2287 ARCSSPPLPAAHLQLLPPPPPR 2352

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>LOC_Os03g38510:12003.t03293:unspliced-genomic hypothetical protein|
          Length = 884

 Score = 34.1 bits (68), Expect = 1.0
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3 / +2

                                                     
Query: 340 GPSSCLCQSLEPQSTSP*RSREPCCNDGQMLSCDQVASCCSG 215
           GPSS L     P S+SP     P C+ G+ L+   V + C G
Sbjct: 329 GPSSDLYSKPPPSSSSPVAGCHPPCSGGRSLTSSVVEAGCGG 454

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>LOC_Os02g08540:12002.t00750:unspliced-genomic expressed protein|
          Length = 5265

 Score = 34.1 bits (68), Expect = 1.0
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = -3 / +2

                         
Query: 145 PPPPSSHWQLLLPP 104
           PPPP  HW LLLPP
Sbjct: 521 PPPPPLHWVLLLPP 562

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>LOC_Os05g51740:12005.t04599:unspliced-genomic receptor protein kinase CLAVATA1 precursor, putative, expressed|
          Length = 4758

 Score = 27.6 bits (54), Expect(2) = 1.0
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -3 / +2

                        
Query: 145  PPPPSSHWQLLL 110
            PPPP   WQLLL
Sbjct: 1040 PPPPRPRWQLLL 1075



 Score = 23.5 bits (45), Expect(2) = 1.0
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1 / +2

                        
Query: 192 VLDAHHEQGQGPG 154
           +L  HHEQ +GPG
Sbjct: 947 LLLVHHEQPRGPG 985

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>LOC_Os02g16290:12002.t01422:unspliced-genomic transposon protein, putative, Mutator sub-class|
          Length = 3453

 Score = 32.2 bits (64), Expect(2) = 1.2
 Identities = 16/42 (38%), Positives = 21/42 (50%)
 Frame = -3 / +1

                                                     
Query: 340 GPSSCLCQSLEPQSTSP*RSREPCCNDGQMLSCDQVASCCSG 215
           GPSS LC    P S+SP     P  + G+ L+   V + C G
Sbjct: 349 GPSSDLCSRPLPSSSSPVAGCRPPRSGGRSLTSSVVEAGCGG 474



 Score = 23.1 bits (44), Expect(2) = 1.2
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3 / +2

                            
Query: 145  PPPPSSHWQLLLPPSA 98
            PPPP+  W  +  PS+
Sbjct: 3101 PPPPAPSWPPIPAPSS 3148

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>LOC_Os04g54810:12004.t04954:unspliced-genomic beta-D-xylosidase, putative, expressed|
          Length = 6793

 Score = 32.7 bits (65), Expect(2) = 2.1
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3 / +2

                                     
Query: 181  SS*AGTGARC*TPPPPSSHWQLLLP 107
            SS + T ARC +PP PSS W  L P
Sbjct: 5141 SSSSRTPARCRSPPSPSSPWPSLAP 5215



 Score = 22.6 bits (43), Expect(2) = 2.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3 / +3

                         
Query: 352  CSLEGPSSCLCQS 314
            CS   P+SC C+S
Sbjct: 3708 CSYSCPNSCSCES 3746

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>LOC_Os02g50820:12002.t04666:unspliced-genomic permease I, putative, expressed|
          Length = 5781

 Score = 32.7 bits (65), Expect = 2.6
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = +3 / +2

                                     
Query: 105 GGRSSCQCEEGGGGVQHRAPVPAHDE 182
           GGR+  +   GGGG    AP P HDE
Sbjct: 374 GGRAGGEMAGGGGGGGGAAPAPKHDE 451

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>LOC_Os08g42750:12008.t04004:unspliced-genomic calcium-dependent protein kinase, isoform AK1, putative, expressed|
          Length = 5175

 Score = 32.2 bits (64), Expect = 3.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +3 / +3

                                  
Query: 135  GGGGVQHRAPVPAHDERQEQYP 200
            GGGG Q RA VP H + QE+ P
Sbjct: 2313 GGGGGQVRADVPPHGQGQERAP 2378

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>LOC_Os06g13140:12006.t01189:unspliced-genomic nucleotide binding protein, putative, expressed|
          Length = 2975

 Score = 32.2 bits (64), Expect = 3.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3 / +3

                                     
Query: 385  RGGTSC**TCPCSLEGPSSCLCQSL 311
            RGG  C   C C +E  SSC C +L
Sbjct: 1281 RGGAGCDRCCACHVEESSSCSCAAL 1355

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>LOC_Os05g30480:12005.t02647:unspliced-genomic luminal-binding protein 4 precursor, putative, expressed|
          Length = 2010

 Score = 32.2 bits (64), Expect = 3.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +3 / +3

                                          
Query: 138  GGGVQHRAPVPAHDERQEQYPGTYQLPEQQ 227
            GGGV+ R P P    R+ + PG+ +L  Q+
Sbjct: 1674 GGGVRRRGPPPQGARRRPEQPGSLRLRRQE 1763

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>LOC_Os01g42294:12001.t03748:unspliced-genomic atypical receptor-like kinase MARK, putative, expressed|
          Length = 5955

 Score = 26.7 bits (52), Expect(2) = 4.4
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -3 / +2

                                              
Query: 394 PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSP 290
           PSRR  ++   TC CS   P++    S    S+SP
Sbjct: 377 PSRRARSAASPTCRCSPSAPTASSAASPTTCSSSP 481



 Score = 22.1 bits (42), Expect(2) = 4.4
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3 / +2

                                             
Query: 202 PGYCS*RSS*AGTGARC*TPPPPSSHWQLLLPPS 101
           P  CS   S A + +R  + P PS       PPS
Sbjct: 458 PTTCSSSPSSASSSSRTTSSPAPSRRRSASSPPS 559

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>LOC_Os02g14220:12002.t01217:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4840

 Score = 26.7 bits (52), Expect(2) = 4.5
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3 / +1

                                     
Query: 286  RSREPCCNDGQMLSCDQVASCCSGS 212
            RSR P     Q  SC +V +CC G+
Sbjct: 4447 RSRAPARAPTQQHSC*RVVACCVGT 4521



 Score = 22.1 bits (42), Expect(2) = 4.5
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3 / +2

                              
Query: 148  TPPPPSSHWQLLLPPSAR 95
            TP PP +  + L  PSAR
Sbjct: 4523 TPLPPGTFEERLAQPSAR 4576

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>LOC_Os11g35400:12011.t03087:unspliced-genomic acyl CoA synthetase, putative, expressed|
          Length = 4742

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = +3 / +1

                                                         
Query: 114 SSCQCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSHES 251
           S C  E+  GG  HR    ++  R+ Q  G   LPE     W HE+
Sbjct: 103 SLCFAEKKDGGDVHREGG*SNSGRRRQAVGRASLPEHLLQGWPHEA 240

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>LOC_Os08g02850:12008.t00179:unspliced-genomic ubiquitin-protein ligase/ zinc ion binding protein, putative,|
           expressed
          Length = 2900

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = -3 / +2

                                               
Query: 199 GYCS*RSS*AGTGARC*TPPPPSSHWQLLLPPSARI 92
           G CS RSS + + ARC + P  S   +L+ PP  R+
Sbjct: 320 GGCSRRSSRSSSPARCSSAPRTSLEVRLVFPPRLRL 427

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>LOC_Os02g54140:12002.t04993:unspliced-genomic 17.5 kDa class II heat shock protein, putative, expressed|
          Length = 970

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = -3 / -1

                                                       
Query: 394 PSRRGGTSC**TCPCSLEGPSSCLCQSLEPQSTSP*RSREPCCN 263
           P   GG +C  T   +      C C  L P   S  RSR  CC+
Sbjct: 550 PRPPGGGTCARTPSATRGARGGCTCTPLPPPPASASRSRRHCCS 419

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>LOC_Os02g54090:12002.t04988:unspliced-genomic expressed protein|
          Length = 4513

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 10/20 (50%), Positives = 15/20 (75%)
 Frame = +3 / +3

                                
Query: 354  GQVHQQDVPPRRLGHHCSKE 413
            G+V +QD+PPR   H+CS +
Sbjct: 4053 GKVRRQDLPPRPYSHNCSSK 4112

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>LOC_Os02g52220:12002.t04803:unspliced-genomic ATP binding protein, putative, expressed|
          Length = 3539

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -3 / -2

                                 
Query: 199 GYCS*RSS*AGTGARC*TPPPP 134
           GYC  R S A + +R *TPPPP
Sbjct: 931 GYCMSRHSPAASSSRG*TPPPP 866

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>LOC_Os01g47670:12001.t04213:unspliced-genomic expressed protein|
          Length = 1209

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = +3 / +3

                                                       
Query: 102 DGGRSSCQCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEA 233
           DGG    +   G  G +     PA   RQE + G   +P Q+EA
Sbjct: 540 DGGAQPRRRRRGAAGPEQGLLQPARARRQETHDGGGDVPPQEEA 671

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>LOC_Os01g14490:12001.t01307:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 4730

 Score = 31.8 bits (63), Expect = 5.0
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -3 / -2

                                
Query: 151 *TPPPPSSHWQLLLPPSARIE 89
           *TPPPP SH  L  PP   I+
Sbjct: 202 *TPPPPHSHQPLSFPPQTSIQ 140

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>LOC_Os02g31960:12002.t02839:unspliced-genomic ATP/GTP binding protein, putative, expressed|
          Length = 7089

 Score = 25.8 bits (50), Expect(2) = 5.9
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = -1 / -1

                                                    
Query: 309  NLSPHLPNVLENHVAMTVKCSHATK*LLVVPAVDKYLGIV 190
            NL  H   ++  H+A   + +       +VP++DK+L ++
Sbjct: 1122 NLPKHTMVIILTHLAQLERLNFINGAFTLVPSIDKHLKMI 1003



 Score = 22.6 bits (43), Expect(2) = 5.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -1 / -1

                          
Query: 345  WKGLLLAFASLWNL 304
            WK LL A   LW+L
Sbjct: 1218 WKNLLQAILVLWDL 1177

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>LOC_Os10g28420:12010.t02194:unspliced-genomic IQ calmodulin-binding motif family protein|
          Length = 1542

 Score = 25.8 bits (50), Expect(2) = 6.6
 Identities = 10/37 (27%), Positives = 16/37 (43%)
 Frame = +3 / +1

                                                
Query: 135 GGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEATWSH 245
           G G   HR   P H   +  Y    +LP ++   +S+
Sbjct: 688 GHGHHHHRRSSPHHPRHRRSYVSRARLPSRRRGNFSY 798



 Score = 22.6 bits (43), Expect(2) = 6.6
 Identities = 8/34 (23%), Positives = 13/34 (38%)
 Frame = +3 / +2

                                              
Query: 318  WQRQEEGPSSEQGQVHQQDVPPRRLGHHCSKEPQ 419
            W+R   G    +     +  PPRR      + P+
Sbjct: 908  WRRASRGNGGWRSTATTRSAPPRRRRRRSRRRPR 1009

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>LOC_Os11g43140:12011.t03844:unspliced-genomic expressed protein|
          Length = 4644

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3 / -3

                                   
Query: 102 DGGRSSCQCEEGGGGVQHRAPVPA 173
           DGG + C    G GG + R+P PA
Sbjct: 517 DGGWAPCSATSGRGGARARSPAPA 446

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>LOC_Os10g35630:12010.t02855:unspliced-genomic expressed protein|
          Length = 2440

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -3 / +3

                                                     
Query: 358  CPCSLEGPSSCLCQSLEPQSTSP*RSREPCCNDGQMLSCDQ 236
            C  S   P++C C +    + SP  SR P C+     SC +
Sbjct: 2043 CRRSPTAPATCGCSTRTTTAASPGSSRSPTCSRCSASSCSE 2165

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>LOC_Os07g30170:12007.t02707:unspliced-genomic beta-ureidopropionase, putative, expressed|
          Length = 3201

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = +3 / +2

                                        
Query: 126 CEEGGGGVQHRAPVPAHDERQEQYPGTYQ 212
           C  GGGGV  R  VPA     +  PG  Q
Sbjct: 173 CAGGGGGVDRRVRVPAQAPPVQPLPGALQ 259

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>LOC_Os07g09000:12007.t00775:unspliced-genomic sec12-like protein 1, putative, expressed|
          Length = 5174

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3 / +1

                                   
Query: 361  TCPCSLEGPSSCLCQSLEPQSTS 293
            TCP  + G S CLC ++ P  T+
Sbjct: 4360 TCPSPISGASLCLCYNMMPADTA 4428

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>LOC_Os03g14900:12003.t01276:unspliced-genomic disease resistance protein RPS2, putative, expressed|
          Length = 3836

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3 / +3

                                        
Query: 129  EEGGGGVQHRAPVPAHDERQEQYPGTYQ 212
            EEGGGGV+ R  V  H   QE   G  +
Sbjct: 930  EEGGGGVEERGGVRRHGMPQEDQDGVLE 1013

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>LOC_Os02g48830:12002.t04467:unspliced-genomic microtubule-associated protein MAP65-1a, putative, expressed|
          Length = 4197

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +3 / -3

                                     
Query: 345  SEQGQVHQQDVPPRRLGHHCSKEPQ 419
            S Q QVHQ+  PP++L  +C+K  Q
Sbjct: 2524 SHQQQVHQEP*PPQQLLFYCTKHDQ 2450

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>LOC_Os02g56219:12002.t005596:unspliced-genomic N-acetyltransferase, putative, expressed|
          Length = 5898

 Score = 31.3 bits (62), Expect = 6.8
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +1 / -3

                                    
Query: 265  CNMVLENVREMWTEVPKTGKGKKK 336
            CN+   N+ E+W+ +P     KKK
Sbjct: 4465 CNLFSSNLNEIWSAIPSANPAKKK 4394

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>LOC_Os01g60860:12001.t05467:unspliced-genomic spotted leaf protein 11, putative, expressed|
          Length = 2493

 Score = 29.0 bits (57), Expect(2) = 6.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3 / +3

                                     
Query: 172  AGTGARC*TPPPPSSHWQLLLPPSA 98
            A  GA   TPPPP S W+  +P +A
Sbjct: 1581 ARRGAPRRTPPPPCSAWRPCIPTAA 1655



 Score = 23.1 bits (44), Expect(2) = 6.9
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = -3 / +3

                              
Query: 268 CNDGQMLSCDQVASCCSGS 212
           C   +  +C + + CCSGS
Sbjct: 411 CRGRRRCACGRCSWCCSGS 467

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>LOC_Os08g36590:12008.t03398:unspliced-genomic expressed protein|
          Length = 2084

 Score = 27.6 bits (54), Expect(2) = 8.0
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3 / +1

                                                      
Query: 105 GGRSSCQCEEGGGGVQHRAPVPAHDERQEQYPGTYQLPEQQEA 233
           GGR   + +EG G  +   P P    R    PG  +   ++ A
Sbjct: 391 GGRPGARRQEGAGEEEEAGPAPPGGPRPPARPGPVRAAPRRRA 519



 Score = 24.0 bits (46), Expect(2) = 8.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3 / +1

                               
Query: 360  VHQQDVPPRRLGHHCSKEP 416
            V Q+    RR+G  CS+EP
Sbjct: 1381 VSQRRQAVRRMGRRCSQEP 1437

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>LOC_Os06g44140:12006.t04102:unspliced-genomic transmembrane 9 superfamily protein member 4, putative, expressed|
          Length = 2941

 Score = 26.3 bits (51), Expect(2) = 8.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = -3 / +3

                                            
Query: 388  RRGGTSC**TCPCSLEGPSSCLCQSLEPQSTS 293
            R GG+ C  TC      P+ C C S    S+S
Sbjct: 1716 RPGGSWCTATCSGRRRAPARCACSSAPGCSSS 1811



 Score = 25.8 bits (50), Expect(2) = 8.0
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = -3 / +3

                         
Query: 166  TGARC*TPPPPSS 128
            T A C +PPPPSS
Sbjct: 2565 TSATCSSPPPPSS 2603

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>LOC_Os09g29830:12009.t02661:unspliced-genomic DNA binding protein, putative, expressed|
          Length = 3416

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3 / -1

                                       
Query: 373  SC**TCPCSLEGPSSCLCQSLEPQSTS 293
            SC   CPCS +  S+C    L P S+S
Sbjct: 2981 SCACACPCSPDARSNCTYMELAPSSSS 2901

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>LOC_Os09g26420:12009.t02321:unspliced-genomic ethylene response factor, putative, expressed|
          Length = 3494

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = +3 / -1

                                              
Query: 279  RER*GDVD*GSKDWQRQEEGPSSEQGQVHQQDVP 380
            R R  +V+  S  WQR   G +SEQ  VHQ+  P
Sbjct: 2318 RHRSSEVELVSLAWQRFASGRASEQQLVHQES*P 2217

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>LOC_Os07g23720:12007.t02069:unspliced-genomic protein binding protein, putative, expressed|
          Length = 1604

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = -3 / +2

                         
Query: 145 PPPPSSHWQLLLPP 104
           PPPP   WQ LLPP
Sbjct: 617 PPPPCCRWQPLLPP 658

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>LOC_Os05g48220:12005.t04256:unspliced-genomic 60S ribosomal protein L33-B, putative, expressed|
          Length = 2115

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 13/39 (33%), Positives = 17/39 (43%)
 Frame = +3 / -1

                                                  
Query: 102 DGGRSSCQCEEGGGGVQHRAPVPAHDERQEQYPGTYQLP 218
           D G       +GGGG   R+P+ A D   +  P    LP
Sbjct: 222 DDGEGRYPATQGGGGESERSPLVAEDGAADVQPHALALP 106

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>LOC_Os04g01250:12004.t00026:unspliced-genomic glutamyl-tRNA, putative, expressed|
          Length = 9315

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 12/15 (80%), Positives = 12/15 (80%)
 Frame = -3 / +2

                          
Query: 148 TPPPPSSHWQLLLPP 104
           TPPPPSS   LLLPP
Sbjct: 134 TPPPPSSPTLLLLPP 178

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>LOC_Os03g29380:12003.t02561:unspliced-genomic conserved hypothetical protein|
          Length = 1351

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3 / -1

                               
Query: 379 GTSC**TCPCSLEGPSSCLC 320
           G SC  TCPC   G  SC C
Sbjct: 394 GCSCRCTCPCPCPGGCSCAC 335

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>LOC_Os01g72600:12001.t06548:unspliced-genomic spotted leaf protein 11, putative, expressed|
          Length = 990

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3 / -1

                                    
Query: 129 EEGGGGVQHRAPVPAHDERQEQYPG 203
           ++GGG +   AP   HDER+E+  G
Sbjct: 600 DDGGGVLHDAAPAVRHDEREERLHG 526

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>LOC_Os01g24680:12001.t02188:unspliced-genomic glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a,|
            putative, expressed
          Length = 6022

 Score = 30.9 bits (61), Expect = 9.3
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -3 / +2

                                          
Query: 535  ISSVKHSLF*SIQYYKLNSDCIAKRLFWGI 446
            + S K SLF S+ ++ LN D   +++FW I
Sbjct: 1391 VHSAKDSLFFSVTFFFLNYDRERRKIFWRI 1480

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>LOC_Os03g29810:12003.t02594:unspliced-genomic ATP-dependent Clp protease proteolytic subunit 3, putative, expressed|
          Length = 3469

 Score = 30.9 bits (61), Expect = 9.4
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1 / +1

                                   
Query: 427  RR*RHLVCPRRVSLLCSRC*VCN 495
            RR  H + P  V LLCS C VCN
Sbjct: 3313 RRFSHELIPDCVQLLCSNCKVCN 3381

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>LOC_Os08g24410:12008.t02211:unspliced-genomic retrotransposon protein, putative, unclassified|
          Length = 5337

 Score = 26.3 bits (51), Expect(2) = 9.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3 / +3

                                         
Query: 114  SSCQCEEGGGGVQHRAPVPAHDERQEQYP 200
            ++   + GGGG + RAP   +  RQ   P
Sbjct: 951  AAAHLQGGGGGPRDRAPADGNPRRQRGSP 1037



 Score = 26.3 bits (51), Expect(2) = 9.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +3 / +3

                                         
Query: 336  GPSSEQGQVHQQDVPPRRLGHHCSKEPQM 422
            G    QG++HQ   P   L H  S E Q+
Sbjct: 5187 GGREHQGELHQHQGPACGLAHQASWEDQV 5273


  Database: tigr.seq.out
    Posted date:  Jul 20, 2007  8:58 AM
  Number of letters in database: 166,841,660
  Number of sequences in database:  56,278
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Sequences: 56278
Number of Hits to DB: 235,039,838
Number of extensions: 3761876
Number of successful extensions: 18954
Number of sequences better than 10.0: 50
Length of query: 220
Length of database: 55,613,886
Length adjustment: 48
Effective length of query: 172
Effective length of database: 52,912,542
Effective search space: 9100957224
Effective search space used: 9100957224
Neighboring words threshold: 13
Window for multiple hits: 40
X1: 16 ( 7.3 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result