Clone Name | FLbaf8l20 |
---|---|
Clone Library Name | barley_pub |
>emb|CT828308.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA011K13, full insert sequence Length = 721 Score = 347 bits (175), Expect = 3e-92 Identities = 265/295 (89%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 142 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 201 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| |||||||| |||||||||||||||||| | |||||||| |||| Sbjct: 202 gaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgag 261 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 |||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 262 ggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 321 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 322 accaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattag 381 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 |||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 382 caagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 436
>dbj|AK241054.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065062N18, full insert sequence Length = 651 Score = 347 bits (175), Expect = 3e-92 Identities = 265/295 (89%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 142 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 201 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| |||||||| |||||||||||||||||| | |||||||| |||| Sbjct: 202 gaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgag 261 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 |||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 262 ggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 321 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 322 accaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattag 381 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 |||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 382 caagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 436
>ref|NM_001061703.1| Oryza sativa (japonica cultivar-group) Os05g0314100 (Os05g0314100) mRNA, partial cds Length = 693 Score = 347 bits (175), Expect = 3e-92 Identities = 265/295 (89%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 142 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 201 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| |||||||| |||||||||||||||||| | |||||||| |||| Sbjct: 202 gaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgag 261 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 |||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 262 ggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 321 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 322 accaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattag 381 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 |||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 382 caagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 436
>dbj|AK121220.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023090H02, full insert sequence Length = 694 Score = 347 bits (175), Expect = 3e-92 Identities = 265/295 (89%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 143 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 202 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| |||||||| |||||||||||||||||| | |||||||| |||| Sbjct: 203 gaacaacacccaggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgag 262 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 |||||||| || ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 263 ggcatttgatcgccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 322 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| || Sbjct: 323 accaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcattag 382 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 |||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 383 caagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 437
>gb|DQ245570.1| Zea mays clone 17588 mRNA sequence Length = 646 Score = 299 bits (151), Expect = 7e-78 Identities = 256/291 (87%) Strand = Plus / Plus Query: 133 aaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaac 192 |||||||| ||||||||||||||||| || || || |||||||||||||||||||||| Sbjct: 98 aaggaggaagaggagttcagcaccggtcctctctcggtgctcatgatgagcgtcaagaat 157 Query: 193 aatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagca 252 ||||||||||| ||||||||||||||||||||||||||| | ||||||||| || |||| Sbjct: 158 aatacccaggttcttatcaactgccggaacaacaagaagttgcttggtcgcgtgcgagcc 217 Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttcca 312 || || || || |||||||||||||| ||||||||| | ||||||||||| ||||| || Sbjct: 218 ttcgatcggcactgcaacatggttcttgagaacgttcgtgagatgtggaccgaggtaccg 277 Query: 313 aagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaag 372 ||||| || ||||||||||||||||| || || |||||||||||||||||||| |||||| Sbjct: 278 aagaccggtaaaggcaagaagaaggctctcccggtgaacaaggacaggttcataagcaag 337 Query: 373 atgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 |||||||||||||| || ||||||||||| || || |||||||| |||||| Sbjct: 338 atgttcctccgcggggattcggtcatcatcgtcctcaggaacccgaaatga 388
>ref|NM_001052041.1| Oryza sativa (japonica cultivar-group) Os01g0967000 (Os01g0967000) mRNA, complete cds Length = 1371 Score = 240 bits (121), Expect = 5e-60 Identities = 184/205 (89%) Strand = Plus / Plus Query: 200 aggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgacc 259 |||| |||||||| |||| ||||||||||||| |||| ||||| |||| |||||||| Sbjct: 1148 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 1207 Query: 260 gtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactg 319 | ||||||||||||||||| ||||| || |||||||||||||| ||||| |||||||||| Sbjct: 1208 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggtaccaaagactg 1267 Query: 320 gcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcc 379 | ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1268 gtaaaggcaagaagaaggctcttccagtgaacaaggacaggttcatcagcaagatgttcc 1327 Query: 380 tccgcggcgactcggtcatcattgt 404 | || || ||||||||||||||||| Sbjct: 1328 tacgtggggactcggtcatcattgt 1352
>gb|DQ245030.1| Zea mays clone 12355 mRNA sequence Length = 838 Score = 200 bits (101), Expect = 4e-48 Identities = 242/289 (83%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||| ||||| || ||||| || || ||||| | || |||||||| || || Sbjct: 148 gaagaaggaggaagaggaatttagcacaggccctctgtcagtactaatgatgagtgttaa 207 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| || ||||| ||||| |||||||||||||| ||||| || | | Sbjct: 208 gaacaacacccaggttctcatcaattgccgcaacaacaagaagctgcttggccgggttcg 267 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 || ||||| || || || |||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 268 tgcttttgatcgccactgtaacatggtgctcgagaacgtgcgggagatgtggacagaggt 327 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 || ||||||||||| ||||| |||||||| || || ||||||||||| || |||||||| Sbjct: 328 ccccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcag 387 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaacccc 417 ||||||||||||| | ||||||||||||||||| || || ||||||||| Sbjct: 388 caagatgttcctcaggggcgactcggtcatcatcgtgctgaggaacccc 436
>gb|AY103713.1| Zea mays PCO076540 mRNA sequence Length = 785 Score = 196 bits (99), Expect = 7e-47 Identities = 243/291 (83%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||| ||||| ||||| || ||||| || || ||||| | || |||||||| || || Sbjct: 167 gaagaaagaggaagaggaatttagcacaggccctctgtcagtactaatgatgagtgttaa 226 Query: 189 gaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgag 248 |||||| |||||||| || ||||| ||||| |||||||||||||| ||||| || | | Sbjct: 227 gaacaacacccaggttctcatcaattgccgcaacaacaagaagctgcttggccgggttcg 286 Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 || ||||| || || || |||||||| ||||||||||| ||||||||||||| ||||| Sbjct: 287 tgcttttgatcgccactgtaacatggtgctcgagaacgtgcgggagatgtggacagaggt 346 Query: 309 tccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcag 368 || ||||||||||| ||||| |||||||| || || ||||||||||| || |||||||| Sbjct: 347 ccccaagactggcaagggcaaaaagaaggctctgcctgtgaacaaggatagattcatcag 406 Query: 369 caagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaa 419 ||||||||||||| | ||||||||||||||||| || || ||||||||||| Sbjct: 407 caagatgttcctcaggggcgactcggtcatcatcgtgctgaggaaccccaa 457
>dbj|AK105062.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-B09, full insert sequence Length = 360 Score = 190 bits (96), Expect = 4e-45 Identities = 132/144 (91%) Strand = Plus / Plus Query: 280 gagaacgttagggagatgtggactgaggttccaaagactggcaaaggcaagaagaaggcc 339 ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 2 gagaatgttagggagatgtggactgaggtaccaaagactggtaaaggcaagaagaaggct 61 Query: 340 cttccagtgaacaaggacaggttcatcagcaagatgttcctccgcggcgactcggtcatc 399 |||||||||||||||||||||||||| |||||||||||||| || || || ||||||||| Sbjct: 62 cttccagtgaacaaggacaggttcattagcaagatgttcctacgtggggattcggtcatc 121 Query: 400 attgttctaaggaaccccaaatga 423 ||||| || |||||||| |||||| Sbjct: 122 attgtgctcaggaacccgaaatga 145
>dbj|AK227792.1| Arabidopsis thaliana mRNA for putative small nuclear ribonucleoprotein D2, complete cds, clone: RAFL14-35-O15 Length = 589 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 132 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 191 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 192 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 251 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 252 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 311 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 312 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 371 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 372 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 419
>ref|NM_180146.3| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 586 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 131 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 190 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 191 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 250 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 251 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 310 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 311 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 370 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 371 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 418
>ref|NM_201981.2| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 594 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 139 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 198 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 199 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 258 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 259 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 318 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 319 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 378 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 379 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 426
>ref|NM_130332.2| Arabidopsis thaliana unknown protein (AT2G47640) mRNA, complete cds Length = 624 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 169 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 228 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 229 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 288 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 289 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 348 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 349 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 408 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 409 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 456
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1 Length = 43261740 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 42631332 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 42631273 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgt 404 |||||||||||||||| || || ||||||||||||||||| Sbjct: 42631272 tcagcaagatgttcctacgtggggactcggtcatcattgt 42631233 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 200 aggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgacc 259 |||| |||||||| |||| ||||||||||||| |||| ||||| |||| |||||||| Sbjct: 42631529 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 42631470 Query: 260 gtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | ||||||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 42631469 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggt 42631421 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 18074073 gtgaagaaggaggaggaggag 18074093 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 agaaggaggaggaggagttc 150 |||||||||||||||||||| Sbjct: 25297943 agaaggaggaggaggagttc 25297924
>dbj|AP004365.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458E05 Length = 193577 Score = 151 bits (76), Expect = 4e-33 Identities = 94/100 (94%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 152215 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 152156 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgt 404 |||||||||||||||| || || ||||||||||||||||| Sbjct: 152155 tcagcaagatgttcctacgtggggactcggtcatcattgt 152116 Score = 97.6 bits (49), Expect = 5e-17 Identities = 94/109 (86%) Strand = Plus / Minus Query: 200 aggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgacc 259 |||| |||||||| |||| ||||||||||||| |||| ||||| |||| |||||||| Sbjct: 152412 aggtgcttatcaattgccagaacaacaagaagttactaggtcgtgtgagggcatttgata 152353 Query: 260 gtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | ||||||||||||||||| ||||| || |||||||||||||| ||||| Sbjct: 152352 gccattgcaacatggttcttgagaatgtcagggagatgtggaccgaggt 152304
>gb|AY086601.1| Arabidopsis thaliana clone 26123 mRNA, complete sequence Length = 619 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 164 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 223 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 224 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 283 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 284 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 343 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 344 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 403 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 404 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 451
>gb|BT004783.1| Arabidopsis thaliana At2g47640 gene, complete cds Length = 327 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 40 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 99 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 100 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 159 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 160 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 219 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 220 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 279 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 280 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 327
>emb|BX821379.1|CNS0AA65 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 586 Score = 151 bits (76), Expect = 4e-33 Identities = 235/288 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 139 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 198 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| | ||||| ||||||||||||| ||| || ||||| || |||| || ||| Sbjct: 199 actcaggttttaatcaattgccggaacaacaggaaacttcttgggcgagtgagggcgttt 258 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || |||||||||||||| || || || || |||||||||||||||||||| || Sbjct: 259 gacagacactgcaacatggttcttgaaaatgtcagagagatgtggactgaggttccgaaa 318 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| |||||||||||||| || ||||| ||||||| || ||||||| ||||||||| Sbjct: 319 actgggaaaggcaagaagaaagcacttccggtgaacagagatcggttcataagcaagatg 378 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 || || || || ||||||||||| || || || ||||| || |||||| Sbjct: 379 tttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 426
>gb|AC104271.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1308_D01, complete sequence Length = 117724 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 45390 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 45331 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 | |||||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 45330 ttagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 45272 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 200 aggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgacc 259 |||| |||||||| |||||||||||||||||| | |||||||| |||| |||||||| | Sbjct: 45581 aggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatc 45522 Query: 260 gtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 45521 gccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 45473 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 47264 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 47205 Query: 189 gaacaatacccaggt 203 |||||| |||||||| Sbjct: 47204 gaacaacacccaggt 47190
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5 Length = 29737217 Score = 149 bits (75), Expect = 1e-32 Identities = 108/119 (90%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 14316604 aggtaccaaagactggtaaaggcaagaagaaggctcttccagtgaacaaggacaggttca 14316545 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 | |||||||||||||| || || || |||||||||||||| || |||||||| |||||| Sbjct: 14316544 ttagcaagatgttcctacgtggggattcggtcatcattgtgctcaggaacccgaaatga 14316486 Score = 129 bits (65), Expect = 1e-26 Identities = 98/109 (89%) Strand = Plus / Minus Query: 200 aggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgacc 259 |||| |||||||| |||||||||||||||||| | |||||||| |||| |||||||| | Sbjct: 14316795 aggtgcttatcaattgccggaacaacaagaagttgcttggtcgtgtgagggcatttgatc 14316736 Query: 260 gtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | ||||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 14316735 gccattgcaacatggttcttgagaatgttagggagatgtggactgaggt 14316687 Score = 85.7 bits (43), Expect = 2e-13 Identities = 67/75 (89%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaa 188 |||||||||||||||||| ||||| || ||||| |||||| |||| ||||||||||| || Sbjct: 14318478 gaagaaggaggaggaggaattcagtacggggccgctgtccgtgctgatgatgagcgtgaa 14318419 Query: 189 gaacaatacccaggt 203 |||||| |||||||| Sbjct: 14318418 gaacaacacccaggt 14318404
>dbj|AK240238.1| Sus scrofa mRNA, clone:UTR010044A05, expressed in uterus Length = 530 Score = 137 bits (69), Expect = 6e-29 Identities = 216/265 (81%) Strand = Plus / Plus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 ||||||||||||||| | ||| ||||| |||||| |||||| | ||||||||||| Sbjct: 133 ggaggaggaggagtttaacacggggccgctgtccgtgctcacacagtcggtcaagaacaa 192 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 ||||| || || ||||||||||| |||||||||||||| || || ||| ||| || || Sbjct: 193 cacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgcgtgaaggcctt 252 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||| | || ||||||||||| || |||||||| | |||||||||||||||||| || || Sbjct: 253 tgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtccccaa 312 Query: 315 gactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagat 374 || ||||| |||||||||||| || || || ||||||||| | | |||| |||||| Sbjct: 313 gagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaagat 372 Query: 375 gttcctccgcggcgactcggtcatc 399 |||||| ||||| |||||||||||| Sbjct: 373 gttcctgcgcggggactcggtcatc 397
>dbj|AK231353.1| Sus scrofa mRNA, clone:ITT010043H12, expressed in intestine Length = 537 Score = 137 bits (69), Expect = 6e-29 Identities = 216/265 (81%) Strand = Plus / Plus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 ||||||||||||||| | ||| ||||| |||||| |||||| | ||||||||||| Sbjct: 133 ggaggaggaggagtttaacacggggccgctgtccgtgctcacacagtcggtcaagaacaa 192 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 ||||| || || ||||||||||| |||||||||||||| || || ||| ||| || || Sbjct: 193 cacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgcgtgaaggcctt 252 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||| | || ||||||||||| || |||||||| | |||||||||||||||||| || || Sbjct: 253 tgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtccccaa 312 Query: 315 gactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagat 374 || ||||| |||||||||||| || || || ||||||||| | | |||| |||||| Sbjct: 313 gagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaagat 372 Query: 375 gttcctccgcggcgactcggtcatc 399 |||||| ||||| |||||||||||| Sbjct: 373 gttcctgcgcggggactcggtcatc 397
>gb|AY610377.1| Sus scrofa clone reli1115b_h17.y1.abd, mRNA sequence Length = 415 Score = 123 bits (62), Expect = 8e-25 Identities = 216/266 (81%), Gaps = 1/266 (0%) Strand = Plus / Plus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 ||||||||||||||| | ||| ||||| |||||| |||||| | ||||||||||| Sbjct: 108 ggaggaggaggagtttaacacggggccgctgtccgtgctcacacagtcggtcaagaacaa 167 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 ||||| || || ||||||||||| |||||||||||||| || || ||| ||| || || Sbjct: 168 cacccaagtgctcatcaactgccgcaacaacaagaagctcctgggccgcgtgaaggcctt 227 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||| | || ||||||||||| || |||||||| | |||||||||||||||||| || || Sbjct: 228 tgacaggcactgcaacatggtgctggagaacgtgaaggagatgtggactgaggtccccaa 287 Query: 315 gactggcaaag-gcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaaga 373 || ||||| | ||||||||||| || || || ||||||||| | | |||| ||||| Sbjct: 288 gagcggcaaggtgcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaaga 347 Query: 374 tgttcctccgcggcgactcggtcatc 399 ||||||| ||||| |||||||||||| Sbjct: 348 tgttcctgcgcggggactcggtcatc 373
>gb|DQ658330.1| Emiliania huxleyi clone Plate2_C01_compl;77-2-19-E12 putative small nuclear ribonucleoprotein d2, complete cds Length = 738 Score = 117 bits (59), Expect = 5e-23 Identities = 215/267 (80%) Strand = Plus / Plus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 |||||||||||||||| ||||||||| || || |||||| | |||||||||| ||| Sbjct: 78 ggaggaggaggagttccacaccgggccgctctcggtgctcacgcagagcgtcaagtccaa 137 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 || ||||| || ||||||||||| |||||||||||||| || || ||| | | || || Sbjct: 138 cacgcaggtgctcatcaactgccgcaacaacaagaagctgctcggccgcgtcaaggcctt 197 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||||| || ||||||||||| ||||||||||| | |||||||||||| |||||||| || Sbjct: 198 tgaccggcactgcaacatggtgctcgagaacgtcaaggagatgtggacggaggttcccaa 257 Query: 315 gactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagat 374 | ||||| ||| ||||||||| || || ||||| ||| | |||||| ||||| Sbjct: 258 aaagggcaagggcgtcaagaaggccaagcccgtcaacaaagaccgcttcatctcgaagat 317 Query: 375 gttcctccgcggcgactcggtcatcat 401 |||||| | ||||||||||||||||| Sbjct: 318 gttcctgagaggcgactcggtcatcat 344
>gb|AC151604.2| Emiliania huxleyi clone JGIACCU-13A1, complete sequence Length = 36530 Score = 117 bits (59), Expect = 5e-23 Identities = 215/267 (80%) Strand = Plus / Minus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 |||||||||||||||| ||||||||| || || |||||| | |||||||||| ||| Sbjct: 3276 ggaggaggaggagttccacaccgggccgctctcggtgctcacgcagagcgtcaagtccaa 3217 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 || ||||| || ||||||||||| |||||||||||||| || || ||| | | || || Sbjct: 3216 cacgcaggtgctcatcaactgccgcaacaacaagaagctgctcggccgcgtcaaggcctt 3157 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||||| || ||||||||||| ||||||||||| | |||||||||||| |||||||| || Sbjct: 3156 tgaccggcactgcaacatggtgctcgagaacgtcaaggagatgtggacggaggttcccaa 3097 Query: 315 gactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagat 374 | ||||| ||| ||||||||| || || ||||| ||| | |||||| ||||| Sbjct: 3096 aaagggcaagggcgtcaagaaggccaagcccgtcaacaaagaccgcttcatctcgaagat 3037 Query: 375 gttcctccgcggcgactcggtcatcat 401 |||||| | ||||||||||||||||| Sbjct: 3036 gttcctgagaggcgactcggtcatcat 3010
>emb|CR714634.2|CNS0GED2 Tetraodon nigroviridis full-length cDNA Length = 610 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 136 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 195 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 196 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 255 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 256 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 315 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| || |||||||||||||| | | |||| ||| ||| Sbjct: 316 agtgggaagggcaagaagaagtccaagccagtgaacaaggatcgctacatctccaaaatg 375 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 376 ttcctgcggggcgactccgtcatcat 401
>emb|CR709252.2|CNS0GA7K Tetraodon nigroviridis full-length cDNA Length = 634 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 155 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 214 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 215 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 274 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 275 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 334 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| || |||||||||||||| | | |||| ||| ||| Sbjct: 335 agtgggaagggcaagaagaagtccaagccagtgaacaaggatcgctacatctccaaaatg 394 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 395 ttcctgcggggcgactccgtcatcat 420
>emb|CR707901.2|CNS0G961 Tetraodon nigroviridis full-length cDNA Length = 630 Score = 115 bits (58), Expect = 2e-22 Identities = 214/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 151 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 210 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 211 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 270 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 271 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 330 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| || |||||||||||||| | | |||| ||| ||| Sbjct: 331 agtgggaagggcaagaagaagtccaagccagtgaacaaggatcgctacatctccaaaatg 390 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 391 ttcctgcggggcgactccgtcatcat 416
>ref|XM_001166252.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 4 (SNRPD2), mRNA Length = 706 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 361 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 420 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 421 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 480 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| ||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 481 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 540 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 541 atctccaagatgttcctgcgcggggactcggtcatc 576
>ref|XM_001166224.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 3 (SNRPD2), mRNA Length = 522 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 177 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 236 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 237 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 296 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| ||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 297 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 356 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 357 atctccaagatgttcctgcgcggggactcggtcatc 392
>ref|XM_001166194.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 2 (SNRPD2), mRNA Length = 521 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 176 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 235 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 236 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 295 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| ||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 296 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 355 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 356 atctccaagatgttcctgcgcggggactcggtcatc 391
>ref|XM_001166157.1| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 1 (SNRPD2), mRNA Length = 514 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 169 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 228 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 229 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 288 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| ||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 289 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 348 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 349 atctccaagatgttcctgcgcggggactcggtcatc 384
>ref|XM_512755.2| PREDICTED: Pan troglodytes small nuclear ribonucleoprotein polypeptide D2, transcript variant 5 (SNRPD2), mRNA Length = 504 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 159 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 218 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 219 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 278 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| ||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 279 gaggtacccaagagcggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 338 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 339 atctccaagatgttcctgcgcggggactcggtcatc 374
>gb|DQ894432.1| Homo sapiens clone FLH176224.01L; RZPDo839A12121D SNRPD2 mRNA, partial sequence Length = 357 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatc 321
>gb|DQ891246.1| Synthetic construct Homo sapiens clone FLH176228.01X; RZPDo839A12122D SNRPD2 mRNA, complete sequence Length = 357 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatc 321
>gb|BC051368.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 6, mRNA (cDNA clone IMAGE:3956684) Length = 1322 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Minus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 381 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 322 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 321 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 262 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 261 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 202 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 201 atctccaagatgttcctgcgcggggactcagtcatc 166
>gb|BC000486.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, mRNA (cDNA clone MGC:8353 IMAGE:2819767), complete cds Length = 492 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 132 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 191 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 192 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 251 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 252 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 311 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 312 atctccaagatgttcctgcgcggggactcagtcatc 347
>gb|BC001930.2| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa, mRNA (cDNA clone MGC:3995 IMAGE:2819767), complete cds Length = 470 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 110 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 169 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 170 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 229 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 230 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 289 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 290 atctccaagatgttcctgcgcggggactcagtcatc 325
>ref|NM_177542.1| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 2, mRNA Length = 876 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 516 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 575 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 576 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 635 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 636 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 695 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 696 atctccaagatgttcctgcgcggggactcagtcatc 731
>ref|NM_004597.4| Homo sapiens small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2), transcript variant 1, mRNA Length = 762 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 402 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 461 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 462 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 521 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 522 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 581 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 582 atctccaagatgttcctgcgcggggactcagtcatc 617
>gb|AY894074.1| Synthetic construct Homo sapiens clone FLH131151.01L small nuclear ribonucleoprotein D2 polypeptide (SNRPD2) mRNA, partial cds Length = 357 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 106 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 165 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 166 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 225 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 226 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 285 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 286 atctccaagatgttcctgcgcggggactcagtcatc 321
>gb|U15008.1|HSU15008 Human SnRNP core protein Sm D2 mRNA, complete cds Length = 479 Score = 111 bits (56), Expect = 3e-21 Identities = 176/216 (81%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||||||||| || || ||||||||||| ||||| ||||| || || || ||| Sbjct: 136 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaaactcctgggccgc 195 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 196 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 255 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||||| |||||||||||| || ||||| ||||| ||| | | | Sbjct: 256 gaggtacccaagagtggcaagggcaagaagaagtccaagccagtcaacaaagaccgctac 315 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| ||||| |||||| Sbjct: 316 atctccaagatgttcctgcgcggggactcagtcatc 351
>emb|CR718739.2|CNS0GHIX Tetraodon nigroviridis full-length cDNA Length = 630 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 151 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 210 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 211 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 270 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 271 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 330 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 331 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 390 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 391 ttcctgcggggcgactccgtcatcat 416
>emb|CR711029.2|CNS0GBKX Tetraodon nigroviridis full-length cDNA Length = 626 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 147 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 206 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 207 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 266 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 267 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 326 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 327 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 386 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 387 ttcctgcggggcgactccgtcatcat 412
>emb|CR711244.2|CNS0GBQW Tetraodon nigroviridis full-length cDNA Length = 604 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 130 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 189 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 190 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 249 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 250 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 309 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 310 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 369 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 370 ttcctgcggggcgactccgtcatcat 395
>emb|CR684049.2|CNS0FQRH Tetraodon nigroviridis full-length cDNA Length = 610 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 139 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 198 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 199 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 258 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 259 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 318 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 319 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 378 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 379 ttcctgcggggcgactccgtcatcat 404
>emb|CR666668.2|CNS0FDDE Tetraodon nigroviridis full-length cDNA Length = 598 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 127 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 186 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 187 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 246 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 247 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 306 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 307 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 366 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 367 ttcctgcggggcgactccgtcatcat 392
>emb|CR662559.2|CNS0FA79 Tetraodon nigroviridis full-length cDNA Length = 622 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 151 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 210 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 211 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 270 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 271 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 330 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 331 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 390 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 391 ttcctgcggggcgactccgtcatcat 416
>emb|CR662545.2|CNS0FA6V Tetraodon nigroviridis full-length cDNA Length = 616 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 146 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 205 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 206 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 265 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 266 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 325 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 326 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 385 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 386 ttcctgcggggcgactccgtcatcat 411
>emb|CR655397.2|CNS0F4OB Tetraodon nigroviridis full-length cDNA Length = 618 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 147 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 206 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 207 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 266 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 267 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 326 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 327 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 386 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 387 ttcctgcggggcgactccgtcatcat 412
>emb|CR650196.2|CNS0F0NU Tetraodon nigroviridis full-length cDNA Length = 593 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 122 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 181 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 182 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 241 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 242 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 301 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 302 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 361 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 362 ttcctgcggggcgactccgtcatcat 387
>emb|CR646312.2|CNS0EXNY Tetraodon nigroviridis full-length cDNA Length = 432 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 142 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 201 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 202 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 261 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 262 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 321 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 322 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 381 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 382 ttcctgcggggcgactccgtcatcat 407
>emb|CR636529.2|CNS0EQ47 Tetraodon nigroviridis full-length cDNA Length = 431 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 141 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 200 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 201 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 260 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 261 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 320 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 321 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 380 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 381 ttcctgcggggcgactccgtcatcat 406
>emb|CR635163.2|CNS0EP29 Tetraodon nigroviridis full-length cDNA Length = 420 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 130 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 189 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 190 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 249 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 250 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 309 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 310 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 369 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 370 ttcctgcggggcgactccgtcatcat 395
>emb|CR634479.2|CNS0EOJ9 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 107 bits (54), Expect = 5e-20 Identities = 213/266 (80%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 141 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 200 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 201 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 260 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 261 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 320 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 321 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 380 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 381 ttcctgcggggcgactccgtcatcat 406
>ref|NM_001034476.1| Bos taurus similar to small nuclear ribonucleoprotein D2 (MGC128077), mRNA gb|BC102877.1| Bos taurus similar to small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:128077 IMAGE:7949710), complete cds Length = 596 Score = 99.6 bits (50), Expect = 1e-17 Identities = 224/282 (79%) Strand = Plus / Plus Query: 135 ggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaa 194 ||||||||||||||| | ||| ||||| || ||| |||||| | | ||||| ||||| Sbjct: 143 ggaggaggaggagtttaacacggggccactctccgtgctcacgcagtcagtcaaaaacaa 202 Query: 195 tacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatt 254 || || || || ||||||||||| |||||||||||||| || || ||| ||| || || Sbjct: 203 cactcaagtgctcatcaactgccgtaacaacaagaagctcctgggccgcgtgaaggcctt 262 Query: 255 tgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaa 314 |||| | || ||||||||||| || |||||||| | ||| |||||||| ||||| || || Sbjct: 263 tgacaggcactgcaacatggtgctggagaacgtgaaggaaatgtggacggaggtccccaa 322 Query: 315 gactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagat 374 || ||||| |||||||||||| || || || ||||||||| | | |||| |||||| Sbjct: 323 gagcggcaagggcaagaagaagtccaagcccgtcaacaaggaccgctacatctccaagat 382 Query: 375 gttcctccgcggcgactcggtcatcattgttctaaggaaccc 416 |||||| ||||| ||||| |||||| | || || |||||||| Sbjct: 383 gttcctgcgcggggactctgtcatcgtggtcctgaggaaccc 424
>emb|CR719572.2|CNS0GI62 Tetraodon nigroviridis full-length cDNA Length = 611 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 137 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 196 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 197 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 256 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || || |||||| Sbjct: 257 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagtcccaaag 316 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 317 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 376 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 377 ttcctgcggggcgactccgtcatcat 402
>emb|CR708642.2|CNS0G9QM Tetraodon nigroviridis full-length cDNA Length = 630 Score = 99.6 bits (50), Expect = 1e-17 Identities = 176/218 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || ||||| || || |||||||| |||||||||||||| || || | Sbjct: 199 gtcaagaacaacacgcaggtcctgattaactgccgcaacaacaagaagcttctcggaaga 258 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 | | ||| |||||| | |||||||||||||| || || ||||| | |||||||||||| Sbjct: 259 gtcaaagcttttgacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggaca 318 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 || |||||||||| ||| || |||||||||||| || ||| |||||||||| | | | Sbjct: 319 gaagttccaaagagtgggaagggcaagaagaagtccaagccaatgaacaaggatcgctac 378 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatcat 401 ||| ||| |||||||| || |||||||| |||||||| Sbjct: 379 atctccaaaatgttcctgcggggcgactccgtcatcat 416
>emb|CR698887.2|CNS0G27N Tetraodon nigroviridis full-length cDNA Length = 535 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 56 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 115 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 116 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 175 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 176 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 235 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | ||||||||||||| | | |||| ||| ||| Sbjct: 236 agtgggaagggcaagaagaagtctaagccagtgaacaagggtcgctacatctccaaaatg 295 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 296 ttcctgcggggcgactccgtcatcat 321
>emb|CR665557.2|CNS0FCIJ Tetraodon nigroviridis full-length cDNA Length = 612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 142 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 201 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 202 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 261 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||| ||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 262 gacaggcattgccacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 321 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 322 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 381 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 382 ttcctgcggggcgactccgtcatcat 407
>emb|CR660721.2|CNS0F8S7 Tetraodon nigroviridis full-length cDNA Length = 612 Score = 99.6 bits (50), Expect = 1e-17 Identities = 212/266 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 141 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 200 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 201 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 260 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 || | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 261 tacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 320 Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 | ||| || |||||||||||| | |||||||||||||| | | |||| ||| ||| Sbjct: 321 agtgggaagggcaagaagaagtctaagccagtgaacaaggatcgctacatctccaaaatg 380 Query: 376 ttcctccgcggcgactcggtcatcat 401 ||||| || |||||||| |||||||| Sbjct: 381 ttcctgcggggcgactccgtcatcat 406
>emb|CR715732.2|CNS0GF7K Tetraodon nigroviridis full-length cDNA Length = 394 Score = 97.6 bits (49), Expect = 5e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 147 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 206 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 207 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 266 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 267 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 326 Query: 316 actggcaaaggcaagaagaag 336 | ||| || |||||||||||| Sbjct: 327 agtgggaagggcaagaagaag 347
>emb|CR706650.2|CNS0G87A Tetraodon nigroviridis full-length cDNA Length = 394 Score = 97.6 bits (49), Expect = 5e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 147 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 206 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 207 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 266 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 267 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 326 Query: 316 actggcaaaggcaagaagaag 336 | ||| || |||||||||||| Sbjct: 327 agtgggaagggcaagaagaag 347
>emb|CR636749.1|CNS0EQAB Tetraodon nigroviridis full-length cDNA Length = 381 Score = 97.6 bits (49), Expect = 5e-17 Identities = 163/201 (81%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||| ||||||||||| |||||| | ||||||||||| Sbjct: 162 gaggaggaggagttcaacacggggcccctgtcggtgctcacacagtcggtcaagaacaac 221 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || || |||||||| |||||||||||||| || || | | | ||| ||| Sbjct: 222 acgcaggtcctgattaactgccgcaacaacaagaagcttctcggaagagtcaaagctttt 281 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | |||||||||||||| || || ||||| | |||||||||||| || ||||||||| Sbjct: 282 gacaggcattgcaacatggtcctggaaaacgtgaaggagatgtggacagaagttccaaag 341 Query: 316 actggcaaaggcaagaagaag 336 | ||| || |||||||||||| Sbjct: 342 agtgggaagggcaagaagaag 362
>gb|AC007191.1|AC007191 Homo sapiens chromosome 19, cosmid R34072, complete sequence Length = 43390 Score = 93.7 bits (47), Expect = 8e-16 Identities = 113/135 (83%) Strand = Plus / Minus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | |||||||||||||||||| || |||| |||||| Sbjct: 7652 tgcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagtggcaag 7593 Query: 325 ggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgc 384 |||||||||||| || ||||| ||||| ||| | | |||| |||||||||||| ||| Sbjct: 7592 ggcaagaagaagtccaagccagtcaacaaagaccgctacatctccaagatgttcctgcgc 7533 Query: 385 ggcgactcggtcatc 399 || ||||| |||||| Sbjct: 7532 ggggactcagtcatc 7518 Score = 54.0 bits (27), Expect = 6e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaa 230 ||||||||||||||||| || || ||||||||||| ||||| ||||| Sbjct: 8392 gtcaagaacaatacccaagtgctcatcaactgccgcaacaataagaa 8346
>ref|NM_116149.2| Arabidopsis thaliana unknown protein (AT3G62840) mRNA, complete cds Length = 1063 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 175 atgatgagcgtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagcta 234 |||||||| || ||||| || || ||||| | ||||| ||||| ||||||| ||| || Sbjct: 199 atgatgagtgttaagaataacactcaggtgttgatcaattgccgtaacaacaggaaactc 258 Query: 235 cttggtcgcatgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggag 294 ||||| || | || || |||||| | || |||||||||||||| || || || || || Sbjct: 259 cttggccgagttagggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaa 318 Query: 295 atgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaag 354 ||||||||||||||||| || || || ||||| |||||||| || ||||| || |||| Sbjct: 319 atgtggactgaggttccgaaaaccggaaaaggaaagaagaaagctcttcctgttaacaga 378 Query: 355 gacaggttcatcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaac 414 || | |||||||||||||||||||| || || ||||| ||||| || || || |||||| Sbjct: 379 gatcgattcatcagcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaac 438 Query: 415 cccaa 419 ||||| Sbjct: 439 cccaa 443
>gb|AY087177.1| Arabidopsis thaliana clone 32457 mRNA, complete sequence Length = 646 Score = 89.7 bits (45), Expect = 1e-14 Identities = 195/245 (79%) Strand = Plus / Plus Query: 175 atgatgagcgtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagcta 234 |||||||| || ||||| || || ||||| | ||||| ||||| ||||||| ||| || Sbjct: 202 atgatgagtgttaagaataacactcaggtgttgatcaattgccgtaacaacaggaaactc 261 Query: 235 cttggtcgcatgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggag 294 ||||| || | || || |||||| | || |||||||||||||| || || || || || Sbjct: 262 cttggccgagttagggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaa 321 Query: 295 atgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaag 354 ||||||||||||||||| || || || ||||| |||||||| || ||||| || |||| Sbjct: 322 atgtggactgaggttccgaaaaccggaaaaggaaagaagaaagctcttcctgttaacaga 381 Query: 355 gacaggttcatcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaac 414 || | |||||||||||||||||||| || || ||||| ||||| || || || |||||| Sbjct: 382 gatcgattcatcagcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaac 441 Query: 415 cccaa 419 ||||| Sbjct: 442 cccaa 446
>gb|BC116860.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:151237 IMAGE:40126179), complete cds Length = 459 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 144 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 203 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 204 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 263 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 264 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 323 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 324 atctccaagatgttcctgcgcggggactcggtcatc 359
>gb|BC116858.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:151235 IMAGE:40126177), complete cds Length = 459 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 144 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 203 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 204 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 263 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 264 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 323 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 324 atctccaagatgttcctgcgcggggactcggtcatc 359
>dbj|AK088105.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430004E09 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>dbj|AK045968.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230328B02 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 462 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 136 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 195 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 196 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 255 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 256 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 315 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 316 atctccaagatgttcctgcgcggggactcggtcatc 351
>dbj|AK007389.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length enriched library, clone:1810009A06 product:small nuclear ribonucleoprotein D2, full insert sequence Length = 467 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>gb|BC051208.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:62953 IMAGE:1510565), complete cds Length = 489 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 140 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 199 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 200 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 259 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 260 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 319 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 320 atctccaagatgttcctgcgcggggactcggtcatc 355
>ref|NM_026943.1| Mus musculus small nuclear ribonucleoprotein D2 (Snrpd2), mRNA gb|BC043014.1| Mus musculus small nuclear ribonucleoprotein D2, mRNA (cDNA clone MGC:57881 IMAGE:5683364), complete cds Length = 508 Score = 87.7 bits (44), Expect = 5e-14 Identities = 173/216 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 161 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 220 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 221 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 280 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 281 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 340 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||||||||||| Sbjct: 341 atctccaagatgttcctgcgcggggactcggtcatc 376
>gb|AY042797.1| Arabidopsis thaliana small nuclear ribonucleoprotein-like protein (F26K9.270) mRNA, complete cds Length = 541 Score = 85.7 bits (43), Expect = 2e-13 Identities = 127/155 (81%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 |||||||||||||| || || || || || ||||||||||||||||| || || || ||| Sbjct: 271 tgcaacatggttcttgaaaatgtcagagaaatgtggactgaggttccgaaaaccggaaaa 330 Query: 325 ggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgc 384 || |||||||| || ||||| || |||| || | |||||||||||||||||||| || Sbjct: 331 ggaaagaagaaagctcttcctgttaacagagatcgattcatcagcaagatgttcctgcgt 390 Query: 385 ggcgactcggtcatcattgttctaaggaaccccaa 419 || ||||| ||||| || || || ||||||||||| Sbjct: 391 ggagactcagtcattatcgtcctcaggaaccccaa 425
>emb|CU137659.1| Medicago truncatula chromosome 5 clone mth2-70k21, COMPLETE SEQUENCE Length = 91424 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Plus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||||||||||||||| ||||| ||||| ||||| | ||||| ||||| || || |||| Sbjct: 72423 aggttccaaagactggtaaaggaaagaaaaaggctcagccagtaaacaaagatagattca 72482 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaat 421 | ||||| ||||| || || || || || |||||||||||||| ||||||||||||| Sbjct: 72483 taagcaaaatgtttcttcgtggagattctgtcatcattgttcttaggaaccccaaat 72539
>emb|CT963111.1| Medicago truncatula chromosome 5 clone mth2-43h1, COMPLETE SEQUENCE Length = 120939 Score = 81.8 bits (41), Expect = 3e-12 Identities = 98/117 (83%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 |||||||||||||||| ||||| ||||| ||||| | ||||| ||||| || || |||| Sbjct: 92949 aggttccaaagactggtaaaggaaagaaaaaggctcagccagtaaacaaagatagattca 92890 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaat 421 | ||||| ||||| || || || || || |||||||||||||| ||||||||||||| Sbjct: 92889 taagcaaaatgtttcttcgtggagattctgtcatcattgttcttaggaaccccaaat 92833
>gb|BT028873.1| Drosophila melanogaster SD20656 full insert cDNA Length = 3257 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 134 aggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaaca 193 |||||||||||||||| | |||||| || |||||| |||||| | | ||| ||||||| Sbjct: 401 aggaggaggaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaaca 342 Query: 194 atacccaggtacttatcaactgccggaacaacaagaagct 233 | |||||||| || ||||||||||| |||||||||||||| Sbjct: 341 acacccaggtgctcatcaactgccgcaacaacaagaagct 302
>gb|AE014297.2| Drosophila melanogaster chromosome 3R, complete sequence Length = 27905053 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Minus Query: 134 aggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaaca 193 |||||||||||||||| | |||||| || |||||| |||||| | | ||| ||||||| Sbjct: 2171308 aggaggaggaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaaca 2171249 Query: 194 atacccaggtacttatcaactgccggaacaacaagaagct 233 | |||||||| || ||||||||||| |||||||||||||| Sbjct: 2171248 acacccaggtgctcatcaactgccgcaacaacaagaagct 2171209
>ref|XM_001108236.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC711841), mRNA Length = 547 Score = 79.8 bits (40), Expect = 1e-11 Identities = 109/132 (82%) Strand = Plus / Plus Query: 268 aacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggc 327 |||||||| || |||||||| | |||||||||||||||||| || |||| ||||| ||| Sbjct: 244 aacatggtgctggagaacgtgaaggagatgtggactgaggtccctaagagcggcaagggc 303 Query: 328 aagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgcggc 387 |||||||| || ||||| ||||| ||| | | |||| |||||||||||| ||||| Sbjct: 304 aagaagaaatccaagccagtcaacaaagaccgctacatctccaagatgttcctgcgcggg 363 Query: 388 gactcggtcatc 399 |||||||||||| Sbjct: 364 gactcggtcatc 375
>ref|NM_141388.2| Drosophila melanogaster CG1249-RA (CG1249), mRNA Length = 765 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 134 aggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaaca 193 |||||||||||||||| | |||||| || |||||| |||||| | | ||| ||||||| Sbjct: 176 aggaggaggaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaaca 235 Query: 194 atacccaggtacttatcaactgccggaacaacaagaagct 233 | |||||||| || ||||||||||| |||||||||||||| Sbjct: 236 acacccaggtgctcatcaactgccgcaacaacaagaagct 275
>gb|AC016445.4| Drosophila melanogaster, chromosome 3R, region 83D-83F, BAC clone BACR19H03, complete sequence Length = 157141 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 134 aggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaaca 193 |||||||||||||||| | |||||| || |||||| |||||| | | ||| ||||||| Sbjct: 44709 aggaggaggaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaaca 44768 Query: 194 atacccaggtacttatcaactgccggaacaacaagaagct 233 | |||||||| || ||||||||||| |||||||||||||| Sbjct: 44769 acacccaggtgctcatcaactgccgcaacaacaagaagct 44808
>gb|AY069315.1| Drosophila melanogaster LD03002 full insert cDNA Length = 773 Score = 79.8 bits (40), Expect = 1e-11 Identities = 85/100 (85%) Strand = Plus / Plus Query: 134 aggaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaaca 193 |||||||||||||||| | |||||| || |||||| |||||| | | ||| ||||||| Sbjct: 150 aggaggaggaggagtttaacaccggcccgctgtccgtgctcacgcagtccgtgaagaaca 209 Query: 194 atacccaggtacttatcaactgccggaacaacaagaagct 233 | |||||||| || ||||||||||| |||||||||||||| Sbjct: 210 acacccaggtgctcatcaactgccgcaacaacaagaagct 249
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 79.8 bits (40), Expect = 1e-11 Identities = 172/216 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || |||||||||||||| || || || Sbjct: 131902 gtcaagaacaacacacaagtgctcattaactgtcgcaacaacaagaagctgctgggccgg 131961 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 131962 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 132021 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 |||||||| |||| ||||| ||||||||||| || || || ||||||||| | | | Sbjct: 132022 gaggttcccaagagcggcaagggcaagaagaaatccaagcctgtcaacaaggaccgctac 132081 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||||||||| ||||| |||| ||||||| Sbjct: 132082 atctccaagatgttcctgcgcggggacttggtcatc 132117
>ref|XM_001111101.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2, transcript variant 2 (LOC715183), mRNA Length = 1373 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | |||||||||||||||||| || |||| ||||| Sbjct: 1103 tgcaacatggtgctggagaacgtgaaggagatgtggactgaggtccctaagagcggcaag 1162 Query: 325 ggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgc 384 ||||||||||| || ||||| ||||| ||| | | |||| |||||||||||| || Sbjct: 1163 ggcaagaagaaatccaagccagtcaacaaagaccgctacatctccaagatgttcctgcgt 1222 Query: 385 ggcgactcggtcatc 399 || |||||||||||| Sbjct: 1223 ggggactcggtcatc 1237
>ref|XM_001111069.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2, transcript variant 1 (LOC715183), mRNA Length = 714 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | |||||||||||||||||| || |||| ||||| Sbjct: 444 tgcaacatggtgctggagaacgtgaaggagatgtggactgaggtccctaagagcggcaag 503 Query: 325 ggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgc 384 ||||||||||| || ||||| ||||| ||| | | |||| |||||||||||| || Sbjct: 504 ggcaagaagaaatccaagccagtcaacaaagaccgctacatctccaagatgttcctgcgt 563 Query: 385 ggcgactcggtcatc 399 || |||||||||||| Sbjct: 564 ggggactcggtcatc 578
>ref|XM_001087489.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC696279), mRNA Length = 509 Score = 77.8 bits (39), Expect = 4e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 266 gcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaag 325 |||||||||| || |||||||| | |||||||||||||||||| || |||| ||||||| Sbjct: 243 gcaacatggtgctggagaacgtgaaggagatgtggactgaggtacccaagagcggcaaag 302 Query: 326 gcaagaagaag 336 ||||||||||| Sbjct: 303 gcaagaagaag 313
>gb|AC145199.3| Mus musculus BAC clone RP23-173N12 from chromosome 7, complete sequence Length = 220892 Score = 77.8 bits (39), Expect = 4e-11 Identities = 111/135 (82%) Strand = Plus / Minus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || || || || | ||||||||||||||||||||| |||| ||||| Sbjct: 57382 tgcaacatggtgctggaaaatgtgaaggagatgtggactgaggttcccaagagcggcaag 57323 Query: 325 ggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgc 384 ||||||||||| || || || ||||||||| | | |||| |||||||||||| ||| Sbjct: 57322 ggcaagaagaaatccaagcctgtcaacaaggaccgctacatctccaagatgttcctgcgc 57263 Query: 385 ggcgactcggtcatc 399 || |||||||||||| Sbjct: 57262 ggggactcggtcatc 57248
>ref|XM_001075460.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC686737), mRNA Length = 490 Score = 71.9 bits (36), Expect = 3e-09 Identities = 150/188 (79%) Strand = Plus / Plus Query: 211 aactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgcaac 270 ||||| || |||||||||||||| || || || ||| || |||||| | || |||||| Sbjct: 159 aactgtcgaaacaacaagaagctcctgggccgggtgaaggcctttgacaggcactgcaac 218 Query: 271 atggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggcaag 330 ||||| || || || || | |||||||||||||||||| || |||| ||||| |||||| Sbjct: 219 atggtgctggaaaatgtgaaggagatgtggactgaggtccccaagagcggcaagggcaag 278 Query: 331 aagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgcggcgac 390 |||||| || || || ||||||||| | | |||| |||||||||||| ||||| ||| Sbjct: 279 aagaagtccaagcctgtcaacaaggaccgctacatctccaagatgttcctgcgcggggac 338 Query: 391 tcggtcat 398 || ||||| Sbjct: 339 tcagtcat 346
>ref|XM_001056581.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC680309), mRNA Length = 490 Score = 71.9 bits (36), Expect = 3e-09 Identities = 150/188 (79%) Strand = Plus / Plus Query: 211 aactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgcaac 270 ||||| || |||||||||||||| || || || ||| || |||||| | || |||||| Sbjct: 159 aactgtcgaaacaacaagaagctcctgggccgggtgaaggcctttgacaggcactgcaac 218 Query: 271 atggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggcaag 330 ||||| || || || || | |||||||||||||||||| || |||| ||||| |||||| Sbjct: 219 atggtgctggaaaatgtgaaggagatgtggactgaggtccccaagagcggcaagggcaag 278 Query: 331 aagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgcggcgac 390 |||||| || || || ||||||||| | | |||| |||||||||||| ||||| ||| Sbjct: 279 aagaagtccaagcctgtcaacaaggaccgctacatctccaagatgttcctgcgcggggac 338 Query: 391 tcggtcat 398 || ||||| Sbjct: 339 tcagtcat 346
>ref|XM_001099573.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC705126), mRNA Length = 540 Score = 71.9 bits (36), Expect = 3e-09 Identities = 123/152 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| ||||| || || |||||||| || ||||| ||||| || || || ||| Sbjct: 148 gtcaagaacaacacccaagtgctcatcaactgtcgcaacaataagaaactcctgggccgc 207 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || || || | || ||||||||||| || |||||||| | ||||||||||||| Sbjct: 208 gtgaaggccttcgataggcactgcaacatggtgctggagaacgtgaaggagatgtggact 267 Query: 304 gaggttccaaagactggcaaaggcaagaagaa 335 ||||| || |||| ||||| ||||||||||| Sbjct: 268 gaggtccctaagagcggcaagggcaagaagaa 299
>emb|BX933865.1| Gallus gallus finished cDNA, clone ChEST916l7 Length = 427 Score = 71.9 bits (36), Expect = 3e-09 Identities = 159/200 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||||||||| ||||| |||| | | | || |||||||| Sbjct: 116 gaggaggaggagttcaacaccgggccgctgtcggtgctgacgcagtcggtgaagaacaac 175 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || ||||||||||| |||||||||||||| || || ||| | | || || Sbjct: 176 acgcaggtgctgatcaactgccgcaacaacaagaagctgctgggccgcgtcaaggccttc 235 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || ||||| ||||| || |||||||| | |||||||||||| ||||| || || Sbjct: 236 gacaggcactgcaatatggtcctggagaacgtgaaggagatgtggacggaggtcccgaaa 295 Query: 316 actggcaaaggcaagaagaa 335 | ||||||||||| ||||| Sbjct: 296 agcggcaaaggcaaaaagaa 315
>emb|BX936185.1| Gallus gallus finished cDNA, clone ChEST146i23 Length = 446 Score = 71.9 bits (36), Expect = 3e-09 Identities = 159/200 (79%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 |||||||||||||||| ||||||||| ||||| |||| | | | || |||||||| Sbjct: 135 gaggaggaggagttcaacaccgggccgctgtcggtgctgacgcagtcggtgaagaacaac 194 Query: 196 acccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcattt 255 || ||||| || ||||||||||| |||||||||||||| || || ||| | | || || Sbjct: 195 acgcaggtgctgatcaactgccgcaacaacaagaagctgctgggccgcgtcaaggccttc 254 Query: 256 gaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaag 315 ||| | || ||||| ||||| || |||||||| | |||||||||||| ||||| || || Sbjct: 255 gacaggcactgcaatatggtcctggagaacgtgaaggagatgtggacggaggtcccgaaa 314 Query: 316 actggcaaaggcaagaagaa 335 | ||||||||||| ||||| Sbjct: 315 agcggcaaaggcaaaaagaa 334
>gb|AC005309.3| Arabidopsis thaliana chromosome 2 clone F17A22 map CIC06C03, complete sequence Length = 106355 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Plus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 ||||||| || ||||| |||||||||||||| || ||||| ||||||| || |||||| Sbjct: 5749 aggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggttca 5808 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 | ||||||||||| || || || ||||||||||| || || || ||||| || |||||| Sbjct: 5809 taagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 5867 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Plus Query: 208 atcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgc 267 ||||| ||||||||||||| ||| || ||||| || |||| || |||||| | || ||| Sbjct: 5570 atcaattgccggaacaacaggaaacttcttgggcgagtgagggcgtttgacagacactgc 5629 Query: 268 aacatggttctcgagaacgttagggagatgtggactgaggt 308 ||||||||||| || || || || ||||||||||||||||| Sbjct: 5630 aacatggttcttgaaaatgtcagagagatgtggactgaggt 5670 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Plus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 5308 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 5367 Query: 196 acccaggta 204 || |||||| Sbjct: 5368 actcaggta 5376
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 69.9 bits (35), Expect = 1e-08 Identities = 98/119 (82%) Strand = Plus / Minus Query: 305 aggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttca 364 ||||||| || ||||| |||||||||||||| || ||||| ||||||| || |||||| Sbjct: 10327 aggttccgaaaactgggaaaggcaagaagaaagcacttccggtgaacagagatcggttca 10268 Query: 365 tcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaaatga 423 | ||||||||||| || || || ||||||||||| || || || ||||| || |||||| Sbjct: 10267 taagcaagatgtttctacgtggagactcggtcattatcgtcctcaggaatccaaaatga 10209 Score = 65.9 bits (33), Expect = 2e-07 Identities = 84/101 (83%) Strand = Plus / Minus Query: 208 atcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgc 267 ||||| ||||||||||||| ||| || ||||| || |||| || |||||| | || ||| Sbjct: 10506 atcaattgccggaacaacaggaaacttcttgggcgagtgagggcgtttgacagacactgc 10447 Query: 268 aacatggttctcgagaacgttagggagatgtggactgaggt 308 ||||||||||| || || || || ||||||||||||||||| Sbjct: 10446 aacatggttcttgaaaatgtcagagagatgtggactgaggt 10406 Score = 42.1 bits (21), Expect = 2.5 Identities = 57/69 (82%) Strand = Plus / Minus Query: 136 gaggaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaat 195 ||||| ||||| |||| ||||||||| || || | || ||||||||||||||||| || Sbjct: 10768 gaggaagaggaattcaacaccgggccactctctgttcttatgatgagcgtcaagaataac 10709 Query: 196 acccaggta 204 || |||||| Sbjct: 10708 actcaggta 10700
>ref|XM_694891.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571315), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Plus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || ||||| || ||||||||||| |||||||||||||| || || | | | | Sbjct: 212 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgctgggcagagtcaaa 271 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggtt 309 ||||| ||| | ||||| || |||||||| ||||| || | || |||||||| ||||| Sbjct: 272 gcattcgacaggcattgtaatatggttctggagaatgtgaaagaaatgtggacagaggtg 331 Query: 310 ccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagc 369 || |||| |||||||||||||||||| | ||||||||||| || | | |||| | Sbjct: 332 cccaagagcggcaaaggcaagaagaagtcaaagccagtgaacaaagatcgctacatctcc 391 Query: 370 aagatgttcctccgcggcgactcggtcatcattgttctaaggaaccc 416 ||||||||||| | ||||||||||||||| | || || |||||||| Sbjct: 392 aagatgttcctgagaggcgactcggtcatcgtggtgctgaggaaccc 438
>ref|XM_694863.1| PREDICTED: Danio rerio similar to small nuclear ribonucleoprotein D2 (LOC571288), mRNA Length = 745 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Plus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || ||||| || ||||||||||| |||||||||||||| || || | | | | Sbjct: 212 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgctgggcagagtcaaa 271 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggtt 309 ||||| ||| | ||||| || |||||||| ||||| || | || |||||||| ||||| Sbjct: 272 gcattcgacaggcattgtaatatggttctggagaatgtgaaagaaatgtggacagaggtg 331 Query: 310 ccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagc 369 || |||| |||||||||||||||||| | ||||||||||| || | | |||| | Sbjct: 332 cccaagagcggcaaaggcaagaagaagtcaaagccagtgaacaaagatcgctacatctcc 391 Query: 370 aagatgttcctccgcggcgactcggtcatcattgttctaaggaaccc 416 ||||||||||| | ||||||||||||||| | || || |||||||| Sbjct: 392 aagatgttcctgagaggcgactcggtcatcgtggtgctgaggaaccc 438
>ref|NM_001017582.1| Danio rerio zgc:110732 (zgc:110732), mRNA gb|BC093003.1| Danio rerio zgc:110732, mRNA (cDNA clone MGC:110732 IMAGE:7177415), complete cds Length = 756 Score = 69.9 bits (35), Expect = 1e-08 Identities = 179/227 (78%) Strand = Plus / Plus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || ||||| || ||||||||||| |||||||||||||| || || | | | | Sbjct: 200 aacaacacacaggtcctcatcaactgccgcaacaacaagaagctgctgggcagagtcaaa 259 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggtt 309 ||||| ||| | ||||| || |||||||| ||||| || | || |||||||| ||||| Sbjct: 260 gcattcgacaggcattgtaatatggttctggagaatgtgaaagaaatgtggacagaggtg 319 Query: 310 ccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagc 369 || |||| |||||||||||||||||| | ||||||||||| || | | |||| | Sbjct: 320 cccaagagcggcaaaggcaagaagaagtcaaagccagtgaacaaagatcgctacatctcc 379 Query: 370 aagatgttcctccgcggcgactcggtcatcattgttctaaggaaccc 416 ||||||||||| | ||||||||||||||| | || || |||||||| Sbjct: 380 aagatgttcctgagaggcgactcggtcatcgtggtgctgaggaaccc 426
>ref|NM_073603.2| Caenorhabditis elegans Small Nuclear Ribonucleoprotein family member (snr-4) (snr-4) mRNA, complete cds Length = 565 Score = 67.9 bits (34), Expect = 4e-08 Identities = 73/86 (84%) Strand = Plus / Plus Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggttcca 312 |||||| | |||||||||||||| ||||| || || | ||| ||||||||||| || ||| Sbjct: 213 tttgacagacattgcaacatggtcctcgaaaatgtgaaggaaatgtggactgaagtgcca 272 Query: 313 aagactggcaaaggcaagaagaaggc 338 |||||||| || || ||||||||||| Sbjct: 273 aagactggaaagggaaagaagaaggc 298
>emb|Z78012.1|CEC52E4 Caenorhabditis elegans Cosmid C52E4, complete sequence Length = 33089 Score = 65.9 bits (33), Expect = 2e-07 Identities = 66/77 (85%) Strand = Plus / Minus Query: 262 cattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggc 321 |||||||||||||| ||||| || || | ||| ||||||||||| || ||||||||||| Sbjct: 14863 cattgcaacatggtcctcgaaaatgtgaaggaaatgtggactgaagtgccaaagactgga 14804 Query: 322 aaaggcaagaagaaggc 338 || || ||||||||||| Sbjct: 14803 aagggaaagaagaaggc 14787
>gb|AY949614.1| Pongo pygmaeus orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 63.9 bits (32), Expect = 7e-07 Identities = 62/72 (86%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || ||||| || | |||||||||||||||||| || |||| ||||| Sbjct: 187 tgcaacatggtgctggagaatgtgaaggagatgtggactgaggtacctaagagcggcaag 246 Query: 325 ggcaagaagaag 336 |||||||||||| Sbjct: 247 ggcaagaagaag 258
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Plus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaag 336 |||||||||||||||||| || |||| |||||| |||||||||||| Sbjct: 80939 ggagatgtggactgaggtacccaagagtggcaatggcaagaagaag 80984
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 60.0 bits (30), Expect = 1e-05 Identities = 42/46 (91%) Strand = Plus / Minus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaag 336 |||||||||||||||||| || |||| |||||| |||||||||||| Sbjct: 28425 ggagatgtggactgaggtacccaagagtggcaatggcaagaagaag 28380
>gb|AC084532.1|CBRG22L08 Caenorhabditis briggsae cosmid G22L08, complete sequence Length = 34558 Score = 60.0 bits (30), Expect = 1e-05 Identities = 63/74 (85%) Strand = Plus / Minus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| ||||||||||| | ||||||||||| || || || |||||||| || Sbjct: 12346 tgcaacatggtgctcgagaacgtcaaagagatgtggacagaagtcccgaagactggaaag 12287 Query: 325 ggcaagaagaaggc 338 || ||||||||||| Sbjct: 12286 ggaaagaagaaggc 12273
>gb|AC155339.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH015H17, complete sequence Length = 110885 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Minus Query: 139 gaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaatacc 198 ||||||||||||| ||| || ||||| || | || |||||||| || |||||||| || Sbjct: 20931 gaggaggagttcaacacgggacccctttctgttctgatgatgagtgttaagaacaacact 20872 Query: 199 caggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgac 258 ||||| | ||||||||||| ||||||| ||| || ||||| || | || || || ||| Sbjct: 20871 caggtcttgatcaactgccgcaacaacaggaaactccttggccgtgttagggctttcgac 20812 Query: 259 cgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | || |||||||||||||| || || || || || |||||||||||||| Sbjct: 20811 aggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgaggt 20762 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| ||||| |||||||| || ||||| || |||| || | ||||||||||||||| Sbjct: 20656 actggaaaaggaaagaagaaagctcttcccgtcaacagagatcgcttcatcagcaagatg 20597 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaa 419 || ||||| || ||||| |||||||| || || ||||| ||||| Sbjct: 20596 tttctccgtggtgactccgtcatcatcgtccttaggaatcccaa 20553
>gb|AC155335.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH001H24, complete sequence Length = 118144 Score = 60.0 bits (30), Expect = 1e-05 Identities = 135/170 (79%) Strand = Plus / Minus Query: 139 gaggaggagttcagcaccgggcccctgtccctgctcatgatgagcgtcaagaacaatacc 198 ||||||||||||| ||| || ||||| || | || |||||||| || |||||||| || Sbjct: 107109 gaggaggagttcaacacgggacccctttctgttctgatgatgagtgttaagaacaacact 107050 Query: 199 caggtacttatcaactgccggaacaacaagaagctacttggtcgcatgagagcatttgac 258 ||||| | ||||||||||| ||||||| ||| || ||||| || | || || || ||| Sbjct: 107049 caggtcttgatcaactgccgcaacaacaggaaactccttggccgtgttagggctttcgac 106990 Query: 259 cgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 | || |||||||||||||| || || || || || |||||||||||||| Sbjct: 106989 aggcactgcaacatggttcttgaaaatgtcagagaaatgtggactgaggt 106940 Score = 56.0 bits (28), Expect = 2e-04 Identities = 85/104 (81%) Strand = Plus / Minus Query: 316 actggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatg 375 ||||| ||||| |||||||| || ||||| || |||| || | ||||||||||||||| Sbjct: 106834 actggaaaaggaaagaagaaagctcttcccgtcaacagagatcgcttcatcagcaagatg 106775 Query: 376 ttcctccgcggcgactcggtcatcattgttctaaggaaccccaa 419 || ||||| || ||||| |||||||| || || ||||| ||||| Sbjct: 106774 tttctccgtggtgactccgtcatcatcgtccttaggaatcccaa 106731
>ref|XM_001229934.1| Chaetomium globosum CBS 148.51 predicted protein (CHGG_03419) mRNA, complete cds Length = 312 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactga 305 |||||||| || ||||||||| |||| |||||||||| |||||||||||||| Sbjct: 193 tttgaccgccactgcaacatgattctggagaacgttaaagagatgtggactga 245
>ref|XM_521555.2| PREDICTED: Pan troglodytes similar to Sm D2 (LOC466153), mRNA Length = 533 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||| | | |||||||||||||||||| || |||| ||||| Sbjct: 242 tgcaacatggtgctggagaacatgaaggagatgtggactgaggtacccaagagcggcaag 301 Query: 325 ggcaagaag 333 ||||||||| Sbjct: 302 ggcaagaag 310
>ref|XM_937349.2| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC648295), mRNA Length = 354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | ||||| |||||||||||| || |||| ||||| Sbjct: 187 tgcaacatggtgctggagaacgtgaaggagacgtggactgaggtacccaagagcggcaag 246 Query: 325 ggcaagaag 333 ||||||||| Sbjct: 247 ggcaagaag 255
>ref|XM_061427.3| PREDICTED: Homo sapiens similar to small nuclear ribonucleoprotein D2 (LOC119358), mRNA Length = 354 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | ||||| |||||||||||| || |||| ||||| Sbjct: 187 tgcaacatggtgctggagaacgtgaaggagacgtggactgaggtacccaagagcggcaag 246 Query: 325 ggcaagaag 333 ||||||||| Sbjct: 247 ggcaagaag 255
>ref|XM_982574.1| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 304 gaggttccaaagactggcaaaggcaagaagaag 336 ||||| || |||| ||||| |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>ref|XM_484260.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 304 gaggttccaaagactggcaaaggcaagaagaag 336 ||||| || |||| ||||| |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>ref|XM_915862.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC432760), mRNA Length = 475 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 138 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 197 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 198 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 257 Query: 304 gaggttccaaagactggcaaaggcaagaagaag 336 ||||| || |||| ||||| |||||||||||| Sbjct: 258 gaggtccccaagagcggcaagggcaagaagaag 290
>gb|AC154808.2| Mus musculus BAC clone RP24-512K19 from chromosome 13, complete sequence Length = 187080 Score = 58.0 bits (29), Expect = 4e-05 Identities = 122/153 (79%) Strand = Plus / Minus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 81394 gtcaagaacaacacacaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 81335 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 81334 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 81275 Query: 304 gaggttccaaagactggcaaaggcaagaagaag 336 ||||| || |||| ||||| |||||||||||| Sbjct: 81274 gaggtccccaagagcggcaagggcaagaagaag 81242
>ref|XM_387194.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07018.1) partial mRNA Length = 468 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 262 cattgcaacatggttctcgagaacgttagggagatgtggac 302 |||||||||||||||||||||||||| | ||| |||||||| Sbjct: 316 cattgcaacatggttctcgagaacgtcaaggaaatgtggac 356 Score = 46.1 bits (23), Expect = 0.16 Identities = 32/35 (91%) Strand = Plus / Plus Query: 343 ccagtgaacaaggacaggttcatcagcaagatgtt 377 ||||| |||||||| ||||||||||||||||||| Sbjct: 394 ccagtcaacaaggatcggttcatcagcaagatgtt 428
>emb|AL390206.14| Human DNA sequence from clone RP11-478K7 on chromosome 10 Contains a small nuclear ribonucleoprotein D2 polypeptide 16.5kDa (SNRPD2) pseudogene and a novel gene (FLJ35900), complete sequence Length = 113039 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | ||||| |||||||||||| || |||| ||||| Sbjct: 82691 tgcaacatggtgctggagaacgtgaaggagacgtggactgaggtacccaagagcggcaag 82750 Query: 325 ggcaagaag 333 ||||||||| Sbjct: 82751 ggcaagaag 82759
>emb|BX027975.1|CNS08TQZ Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 505 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Minus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || |||||||| || |||||||| |||||||| ||||| || || ||| ||| | Sbjct: 303 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 244 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 || ||||| || || ||||||||||| || || ||||| | ||| |||||||| Sbjct: 243 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 191
>emb|BX027974.1|CNS08TQY Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA41DD12 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 523 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || |||||||| || |||||||| |||||||| ||||| || || ||| ||| | Sbjct: 180 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 239 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 || ||||| || || ||||||||||| || || ||||| | ||| |||||||| Sbjct: 240 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 292
>ref|XM_318388.2| Anopheles gambiae str. PEST ENSANGP00000002741 (ENSANGG00000002272), partial mRNA Length = 417 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/113 (81%) Strand = Plus / Plus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgcatgaga 249 ||||| || |||||||| || |||||||| |||||||| ||||| || || ||| ||| | Sbjct: 106 aacaacacgcaggtactgataaactgccgcaacaacaaaaagctgctggggcgcgtgaaa 165 Query: 250 gcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 || ||||| || || ||||||||||| || || ||||| | ||| |||||||| Sbjct: 166 gcgtttgatcgccactgcaacatggtgctggaaaacgtgaaggaaatgtggac 218
>ref|XM_214847.3| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 532 Score = 56.0 bits (28), Expect = 2e-04 Identities = 139/176 (78%) Strand = Plus / Plus Query: 211 aactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgcaac 270 ||||| || |||||||||||||| || || || ||| || |||||| | || |||||| Sbjct: 201 aactgtcgaaacaacaagaagctcctgggccgggtgaaggcctttgacaggcactgcaac 260 Query: 271 atggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggcaag 330 ||||| || || || || | |||||| ||||||||||| || |||| ||||| |||||| Sbjct: 261 atggtgctggaaaatgtgaaggagatatggactgaggtccccaagagcggcaagggcaag 320 Query: 331 aagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgcgg 386 |||||| || || || ||||||||| | | |||| |||||||||||| ||||| Sbjct: 321 aagaagtccaagcctgtcaacaaggaccgctacatctccaagatgttcctgcgcgg 376
>ref|XM_001054247.1| PREDICTED: Rattus norvegicus small nuclear ribonucleoprotein D2 (predicted) (Snrpd2_predicted), mRNA Length = 532 Score = 56.0 bits (28), Expect = 2e-04 Identities = 139/176 (78%) Strand = Plus / Plus Query: 211 aactgccggaacaacaagaagctacttggtcgcatgagagcatttgaccgtcattgcaac 270 ||||| || |||||||||||||| || || || ||| || |||||| | || |||||| Sbjct: 201 aactgtcgaaacaacaagaagctcctgggccgggtgaaggcctttgacaggcactgcaac 260 Query: 271 atggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggcaag 330 ||||| || || || || | |||||| ||||||||||| || |||| ||||| |||||| Sbjct: 261 atggtgctggaaaatgtgaaggagatatggactgaggtccccaagagcggcaagggcaag 320 Query: 331 aagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctccgcgg 386 |||||| || || || ||||||||| | | |||| |||||||||||| ||||| Sbjct: 321 aagaagtccaagcctgtcaacaaggaccgctacatctccaagatgttcctgcgcgg 376
>ref|XM_905150.2| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC631370), mRNA Length = 476 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 139 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 198 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 199 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 258 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||| |||||||||||| || || || ||||||||| | | | Sbjct: 259 gaggtccccaagagcagcaagggcaagaagaagtccaagcctgtcaacaaggactgctac 318 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||| ||||| || || |||||||||||| Sbjct: 319 atctccaagatattcctgcgtggggactcggtcatc 354
>ref|XM_619909.3| PREDICTED: Mus musculus similar to small nuclear ribonucleoprotein D2 (LOC545531), mRNA Length = 476 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 139 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 198 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 199 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 258 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||| |||||||||||| || || || ||||||||| | | | Sbjct: 259 gaggtccccaagagcagcaagggcaagaagaagtccaagcctgtcaacaaggactgctac 318 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||| ||||| || || |||||||||||| Sbjct: 319 atctccaagatattcctgcgtggggactcggtcatc 354
>gb|AC114675.9| Mus musculus chromosome 3, clone RP24-210G2, complete sequence Length = 153302 Score = 56.0 bits (28), Expect = 2e-04 Identities = 169/216 (78%) Strand = Plus / Minus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || || ||||| || ||||| |||||||| || || || Sbjct: 102637 gtcaagaacaacacgcaagtgctcattaactgtcgcaacaagaagaagctgctgggccgg 102578 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggact 303 ||| || |||||| | || ||||||||||| || || || || | ||||||||||||| Sbjct: 102577 gtgaaggcctttgacaggcactgcaacatggtgctggaaaatgtgaaggagatgtggact 102518 Query: 304 gaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaaggacaggttc 363 ||||| || |||| |||| |||||||||||| || || || ||||||||| | | | Sbjct: 102517 gaggtccccaagagcagcaagggcaagaagaagtccaagcctgtcaacaaggactgctac 102458 Query: 364 atcagcaagatgttcctccgcggcgactcggtcatc 399 ||| |||||| ||||| || || |||||||||||| Sbjct: 102457 atctccaagatattcctgcgtggggactcggtcatc 102422
>ref|XM_001177104.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC757948 (LOC757948), mRNA Length = 838 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || ||||| || ||||||||| | ||||||||||| |||| || || Sbjct: 166 gtcaagaacaacacacaggttctaatcaactgcagaaacaacaagaaattactaggacgt 225 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 | | ||||||||| | |||||||| ||||| || ||||| || | |||||||||||| Sbjct: 226 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 284
>ref|XM_001178435.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC754356 (LOC754356), mRNA Length = 838 Score = 54.0 bits (27), Expect = 6e-04 Identities = 96/119 (80%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || ||||| || ||||||||| | ||||||||||| |||| || || Sbjct: 166 gtcaagaacaacacacaggttctaatcaactgcagaaacaacaagaaattactaggacgt 225 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 | | ||||||||| | |||||||| ||||| || ||||| || | |||||||||||| Sbjct: 226 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 284
>ref|XM_001083377.1| PREDICTED: Macaca mulatta similar to small nuclear ribonucleoprotein D2 (LOC695079), mRNA Length = 578 Score = 54.0 bits (27), Expect = 6e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | ||||||||||||||| || || |||| ||||| Sbjct: 270 tgcaacatggtgctggagaacgtgaaggagatgtggactgaagtccctaagagcggcaag 329 Query: 325 ggcaagaagaa 335 || |||||||| Sbjct: 330 ggaaagaagaa 340
>emb|CT010488.9| Mouse DNA sequence from clone RP23-133A3 on chromosome 9, complete sequence Length = 219139 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaa 350 |||||||||||||||||| ||||||| || ||| || ||||||||| || ||| || || Sbjct: 210628 ggagatgtggactgaggtcccaaagagtgtcaagggtaagaagaagtccaatcctgtcaa 210687 Query: 351 caaggac 357 ||||||| Sbjct: 210688 caaggac 210694
>gb|AC155923.2| Mus musculus BAC clone RP24-488E11 from chromosome 9, complete sequence Length = 134932 Score = 54.0 bits (27), Expect = 6e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaa 350 |||||||||||||||||| ||||||| || ||| || ||||||||| || ||| || || Sbjct: 2223 ggagatgtggactgaggtcccaaagagtgtcaagggtaagaagaagtccaatcctgtcaa 2282 Query: 351 caaggac 357 ||||||| Sbjct: 2283 caaggac 2289
>emb|AL162651.1|ATF26K9 Arabidopsis thaliana DNA chromosome 3, BAC clone F26K9 Length = 110257 Score = 54.0 bits (27), Expect = 6e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 361 ttcatcagcaagatgttcctccgcggcgactcggtcatcattgttctaaggaaccccaa 419 |||||||||||||||||||| || || ||||| ||||| || || || ||||||||||| Sbjct: 88763 ttcatcagcaagatgttcctgcgtggagactcagtcattatcgtcctcaggaaccccaa 88705 Score = 46.1 bits (23), Expect = 0.16 Identities = 107/135 (79%) Strand = Plus / Minus Query: 175 atgatgagcgtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagcta 234 |||||||| || ||||| || || ||||| | ||||| ||||| ||||||| ||| || Sbjct: 89037 atgatgagtgttaagaataacactcaggtgttgatcaattgccgtaacaacaggaaactc 88978 Query: 235 cttggtcgcatgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggag 294 ||||| || | || || |||||| | || |||||||||||||| || || || || || Sbjct: 88977 cttggccgagttagggcttttgacaggcactgcaacatggttcttgaaaatgtcagagaa 88918 Query: 295 atgtggactgaggtt 309 ||||||||||||||| Sbjct: 88917 atgtggactgaggtt 88903
>emb|BX663502.9| Zebrafish DNA sequence from clone CH211-202C21 in linkage group 18, complete sequence Length = 188674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 123/155 (79%) Strand = Plus / Minus Query: 262 cattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggc 321 ||||| || |||||||| ||||| || | || |||||||| ||||| || |||| ||| Sbjct: 100899 cattgtaatatggttctggagaatgtgaaagaaatgtggacagaggtgcccaagagcggc 100840 Query: 322 aaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctc 381 ||||||||||||||| | ||||||||||| || | | |||| |||||||||||| Sbjct: 100839 aaaggcaagaagaagtcaaagccagtgaacaaagatcgctacatctccaagatgttcctg 100780 Query: 382 cgcggcgactcggtcatcattgttctaaggaaccc 416 | ||||||||||||||| | || || |||||||| Sbjct: 100779 agaggcgactcggtcatcgtggtgctgaggaaccc 100745 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagct 233 ||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 104217 aacaacacacaggtcctcatcaactgccgcaacaacaagaagct 104174
>emb|AL928979.4| Zebrafish DNA sequence from clone DKEY-113G17, complete sequence Length = 193205 Score = 54.0 bits (27), Expect = 6e-04 Identities = 123/155 (79%) Strand = Plus / Minus Query: 262 cattgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggc 321 ||||| || |||||||| ||||| || | || |||||||| ||||| || |||| ||| Sbjct: 122965 cattgtaatatggttctggagaatgtgaaagaaatgtggacagaggtgcccaagagcggc 122906 Query: 322 aaaggcaagaagaaggcccttccagtgaacaaggacaggttcatcagcaagatgttcctc 381 ||||||||||||||| | ||||||||||| || | | |||| |||||||||||| Sbjct: 122905 aaaggcaagaagaagtcaaagccagtgaacaaagatcgctacatctccaagatgttcctg 122846 Query: 382 cgcggcgactcggtcatcattgttctaaggaaccc 416 | ||||||||||||||| | || || |||||||| Sbjct: 122845 agaggcgactcggtcatcgtggtgctgaggaaccc 122811 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Minus Query: 190 aacaatacccaggtacttatcaactgccggaacaacaagaagct 233 ||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 126464 aacaacacacaggtcctcatcaactgccgcaacaacaagaagct 126421
>emb|CT032728.1| Platynereis dumerilii EST IB0AAA32DE04FM1 Length = 699 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 183 cgtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagct 233 |||||||||||| || ||||| || ||||||||| | |||||||||||||| Sbjct: 498 cgtcaagaacaacacacaggtcctcatcaactgcagaaacaacaagaagct 448
>emb|AL513466.1|NCB18D24 Neurospora crassa DNA linkage group V BAC contig B18D24 Length = 157180 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Minus Query: 349 aacaaggacaggttcatcagcaagatgtt 377 |||||||||||||| |||||||||||||| Sbjct: 129169 aacaaggacaggtttatcagcaagatgtt 129141
>emb|AL596209.13| Mouse DNA sequence from clone RP23-278F12 on chromosome 11 Contains the 3' end of the Ulk2 gene for Unc-51 like kinase 2 (C. elegans), the Prpsap2 gene for phosphoribosyl pyrophosphate synthetase-associated protein 2, the gene for a novel sodium/glucose cotransporter protein, the gene for a novel protein (2310040C09Rik), the Grap gene for GRB2-related adaptor protein and a CpG island, complete sequence Length = 186359 Score = 50.1 bits (25), Expect = 0.010 Identities = 25/25 (100%) Strand = Plus / Minus Query: 123 caatgtgaagaaggaggaggaggag 147 ||||||||||||||||||||||||| Sbjct: 182553 caatgtgaagaaggaggaggaggag 182529
>ref|XM_956031.1| Neurospora crassa OR74A hypothetical protein (NCU03778.1) partial mRNA Length = 381 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 349 aacaaggacaggttcatcagcaagatgtt 377 |||||||||||||| |||||||||||||| Sbjct: 292 aacaaggacaggtttatcagcaagatgtt 320
>gb|AY949615.1| Hylobates lar orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 357 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Plus Query: 268 aacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaaggc 327 |||||||| || |||||| | | |||||||||||||||||| || |||| |||| ||| Sbjct: 190 aacatggtgctggagaacatgaaggagatgtggactgaggtacccaagagcagcaagggc 249 Query: 328 aagaagaag 336 ||||||||| Sbjct: 250 aagaagaag 258
>gb|AY949613.1| Gorilla gorilla orthologous to Homo sapiens retroposed sequence ENSG00000148667 genomic sequence Length = 354 Score = 50.1 bits (25), Expect = 0.010 Identities = 58/69 (84%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || |||||||| | |||||||||||| ||||| || |||| ||||| Sbjct: 187 tgcaacatggtgctggagaacgtgaaggagatgtggaccgaggtacccaagagcggcaag 246 Query: 325 ggcaagaag 333 ||| ||||| Sbjct: 247 ggcgagaag 255
>gb|AY431899.1| Aedes aegypti ASAP ID: 35871 small nuclear ribonucleoprotein mRNA sequence Length = 630 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaa 227 |||||||||||||| ||||| || || |||||||| |||||||| Sbjct: 241 gtcaagaacaatactcaggttctcataaactgccgcaacaacaa 284
>ref|XM_755835.1| Ustilago maydis 521 hypothetical protein (UM04781.1) partial mRNA Length = 336 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 349 aacaaggacaggttcatcagcaagatgttcctccgcggcgactcggtc 396 ||||||||| | |||||| |||||||||||| || |||||||||||| Sbjct: 262 aacaaggaccgcttcatctccaagatgttccttcgtggcgactcggtc 309
>ref|XM_748269.1| Aspergillus fumigatus Af293 small nuclear ribonucleoprotein SmD2 (Afu5g12910) partial mRNA Length = 369 Score = 48.1 bits (24), Expect = 0.040 Identities = 39/44 (88%) Strand = Plus / Plus Query: 346 gtgaacaaggacaggttcatcagcaagatgttcctccgcggcga 389 ||||||||||| | |||||||||||||||||||| || ||||| Sbjct: 298 gtgaacaaggatcgcttcatcagcaagatgttcctgcgaggcga 341 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 |||||||| || ||||| ||||| ||||||||||| | ||||||||||| Sbjct: 217 tttgaccgccactgcaatatggtgctcgagaacgtgaaagagatgtggac 266
>ref|XM_001176405.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC757655 (LOC757655), mRNA Length = 652 Score = 46.1 bits (23), Expect = 0.16 Identities = 95/119 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || ||||||||| | ||||||||||| |||| || || Sbjct: 175 gtcaagaacaacacacaagttctaatcaactgcagaaacaacaagaaattactaggacgt 234 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 | | ||||||||| | |||||||| ||||| || ||||| || | |||||||||||| Sbjct: 235 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 293
>ref|XM_001177365.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC753400 (LOC753400), mRNA Length = 652 Score = 46.1 bits (23), Expect = 0.16 Identities = 95/119 (79%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgccggaacaacaagaagctacttggtcgc 243 ||||||||||| || || || || ||||||||| | ||||||||||| |||| || || Sbjct: 175 gtcaagaacaacacacaagttctaatcaactgcagaaacaacaagaaattactaggacgt 234 Query: 244 atgagagcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 | | ||||||||| | |||||||| ||||| || ||||| || | |||||||||||| Sbjct: 235 gtcaaggcatttgacaggcattgcaatatggtccttgagaatgtgaaggagatgtggac 293
>ref|XM_654314.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN1802.2), mRNA Length = 222 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 268 aacatggttctcgagaacgttagggagatgtggactgag 306 ||||||||||| |||||||| | ||||||||||||||| Sbjct: 88 aacatggttcttgagaacgtcaaagagatgtggactgag 126
>gb|BC066138.1| Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 5, mRNA (cDNA clone MGC:76437 IMAGE:30094199), complete cds Length = 3392 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 atgtgaagaaggaggaggaggag 147 ||||||||||||||||||||||| Sbjct: 2188 atgtgaagaaggaggaggaggag 2210
>gb|AC131762.2| Mus musculus BAC clone RP24-228J18 from chromosome 12, complete sequence Length = 157435 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 atgtgaagaaggaggaggaggag 147 ||||||||||||||||||||||| Sbjct: 143887 atgtgaagaaggaggaggaggag 143865
>dbj|AB225845.1| Aspergillus oryzae cDNA, contig sequence: AoEST2700 Length = 893 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Plus Query: 361 ttcatcagcaagatgttcctccgcggcgactcggtcatc 399 |||||||||||||||||||| || || ||||| |||||| Sbjct: 333 ttcatcagcaagatgttcctgcgtggtgactccgtcatc 371
>gb|AF526256.1| Chlamys farreri clone iolscfcl385ct402cn424 small nuclear ribonucleoprotein D2-like protein mRNA, complete cds Length = 575 Score = 46.1 bits (23), Expect = 0.16 Identities = 71/87 (81%) Strand = Plus / Plus Query: 249 agcatttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 |||||||||| | |||||||| |||||| | || || |||| ||| ||||||||||| || Sbjct: 248 agcatttgacaggcattgcaatatggttttggaaaatgttaaggaaatgtggactgaagt 307 Query: 309 tccaaagactggcaaaggcaagaagaa 335 ||||| || || || || |||||||| Sbjct: 308 accaaaaacaggaaagggaaagaagaa 334 Score = 40.1 bits (20), Expect = 9.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 140 aggaggagttcagcaccgggcccctgtc 167 |||||||||||| ||| ||||||||||| Sbjct: 139 aggaggagttcaacactgggcccctgtc 166
>emb|CT010432.7| Mouse DNA sequence from clone RP23-337G13 on chromosome 12, complete sequence Length = 207186 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 125 atgtgaagaaggaggaggaggag 147 ||||||||||||||||||||||| Sbjct: 13760 atgtgaagaaggaggaggaggag 13738
>ref|NM_172805.1| Mus musculus potassium voltage-gated channel, subfamily H (eag-related), member 5 (Kcnh5), mRNA dbj|AK032438.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430546I09 product:EAG K+ CHANNEL, ISOFORM 2 homolog [Rattus norvegicus] (Kcnh5), full insert sequence Length = 4059 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 atgtgaagaaggaggaggaggag 147 ||||||||||||||||||||||| Sbjct: 2847 atgtgaagaaggaggaggaggag 2869
>emb|AL355384.6| Human DNA sequence from clone RP11-626C11 on chromosome 10 Contains a CpG island, complete sequence Length = 159305 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 561 tactggtccagtgttgtagtttg 583 ||||||||||||||||||||||| Sbjct: 133403 tactggtccagtgttgtagtttg 133381
>emb|AL731780.6| Mouse DNA sequence from clone RP23-365D10 on chromosome 4, complete sequence Length = 78870 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggagtt 149 ||||||||||||||||||||||| Sbjct: 48407 gtgaagaaggaggaggaggagtt 48385
>ref|XM_001211176.1| Aspergillus terreus NIH2624 small nuclear ribonucleoprotein Sm D2 (ATEG_01998) mRNA, complete cds Length = 348 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggac 302 ||||||||||| || |||||||| | |||||||||||| Sbjct: 208 tgcaacatggtgctggagaacgtcaaggagatgtggac 245
>ref|XM_001066013.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC683457), mRNA Length = 231 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaag 336 |||||||||||||||||| || |||| |||| |||||||||||| Sbjct: 87 ggagatgtggactgaggtccccaagagcagcaagggcaagaagaag 132
>ref|XM_001064886.1| PREDICTED: Rattus norvegicus similar to small nuclear ribonucleoprotein D2 (LOC685696), mRNA Length = 231 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Plus Query: 291 ggagatgtggactgaggttccaaagactggcaaaggcaagaagaag 336 |||||||||||||||||| || |||| |||| |||||||||||| Sbjct: 87 ggagatgtggactgaggtccccaagagcagcaagggcaagaagaag 132
>ref|XM_361539.1| Magnaporthe grisea 70-15 hypothetical protein (MG04013.4) partial mRNA Length = 354 Score = 44.1 bits (22), Expect = 0.62 Identities = 34/38 (89%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggac 302 ||||| ||||| ||||||||||| | |||||||||||| Sbjct: 205 tgcaatatggtgctcgagaacgtgaaggagatgtggac 242
>ref|XM_505089.1| Yarrowia lipolytica CLIB122, YALI0F06644g predicted mRNA Length = 348 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 |||||||| || | ||||||||| || |||||||| | |||||||||||| Sbjct: 187 tttgaccggcactccaacatggtgctggagaacgtgaaggagatgtggac 236
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 44.1 bits (22), Expect = 0.62 Identities = 55/66 (83%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || || || || | |||||||||||||||||| || |||| ||||| Sbjct: 147547 tgcaacatggtgctggaaaatgtgaaggagatgtggactgaggtccccaagagcggcaag 147606 Query: 325 ggcaag 330 |||||| Sbjct: 147607 ggcaag 147612
>dbj|AK017575.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length enriched library, clone:5730419F03 product:unclassifiable, full insert sequence Length = 2092 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggagtt 149 |||||||||||||||||||||| Sbjct: 2042 tgaagaaggaggaggaggagtt 2063
>gb|AC079222.17| Mus musculus chromosome 1, clone RP22-292L24, complete sequence Length = 159700 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggagtt 149 |||||||||||||||||||||| Sbjct: 91581 tgaagaaggaggaggaggagtt 91602
>ref|XM_677877.1| PREDICTED: Danio rerio similar to zinc finger protein 658 (LOC555384), mRNA Length = 1281 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 tgtgaagaaggaggaggaggag 147 |||||||||||||||||||||| Sbjct: 792 tgtgaagaaggaggaggaggag 813 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 126 tgtgaagaaggaggaggaggag 147 |||||||||||||||||||||| Sbjct: 1146 tgtgaagaaggaggaggaggag 1167
>gb|AF179588.1|AF179588 Rattus norvegicus Slp-b gene, exon 1b Length = 14044 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 tgtgaagaaggaggaggaggag 147 |||||||||||||||||||||| Sbjct: 8915 tgtgaagaaggaggaggaggag 8894
>emb|CR387999.7| Opossum DNA sequence from clone XX-158F12, complete sequence Length = 169093 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 316 actggcaaaggcaagaagaagg 337 |||||||||||||||||||||| Sbjct: 17441 actggcaaaggcaagaagaagg 17462
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 44.1 bits (22), Expect = 0.62 Identities = 43/50 (86%) Strand = Plus / Plus Query: 253 tttgaccgtcattgcaacatggttctcgagaacgttagggagatgtggac 302 |||||||| || | ||||||||| || |||||||| | |||||||||||| Sbjct: 981139 tttgaccggcactccaacatggtgctggagaacgtgaaggagatgtggac 981188
>emb|CR752641.12| Zebrafish DNA sequence from clone DKEY-1P18 in linkage group 25, complete sequence Length = 238675 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 410 ggaaccccaaatgatttagac 430 ||||||||||||||||||||| Sbjct: 72852 ggaaccccaaatgatttagac 72872
>emb|CR388022.12| Zebrafish DNA sequence from clone CH211-183H23 in linkage group 25, complete sequence Length = 175540 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 410 ggaaccccaaatgatttagac 430 ||||||||||||||||||||| Sbjct: 68361 ggaaccccaaatgatttagac 68341
>gb|AE013599.4| Drosophila melanogaster chromosome 2R, complete sequence Length = 21146708 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 17418952 gtgaagaaggaggaggaggag 17418932
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 62836 gtgaagaaggaggaggaggag 62856
>gb|AF202880.1| Pagrus auratus microsatellite GA1 sequence Length = 812 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 240 gaagaaggaggaggaggagtt 220
>ref|NM_001005128.1| Xenopus tropicalis MGC89748 protein (MGC89748), mRNA gb|BC077664.1| Xenopus tropicalis MGC89748 protein, mRNA (cDNA clone MGC:89748 IMAGE:7027295), complete cds Length = 684 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 295 atgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaag 354 |||||||||||||| || |||| |||||| || || |||||| || ||||||||||| Sbjct: 289 atgtggactgaggtccctaagagtggcaagggaaaaaagaagtccaaaccagtgaacaaa 348 Query: 355 gacag 359 ||||| Sbjct: 349 gacag 353
>gb|AC103613.7| Mus musculus chromosome 14, clone RP24-75B12, complete sequence Length = 191158 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 105756 gtgaagaaggaggaggaggag 105776
>ref|XM_539112.2| PREDICTED: Canis familiaris similar to small nuclear ribonucleoprotein D2 (LOC481991), mRNA Length = 361 Score = 42.1 bits (21), Expect = 2.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 184 gtcaagaacaatacccaggtacttatcaactgc 216 ||||||||||| |||||||| ||||| |||||| Sbjct: 113 gtcaagaacaacacccaggtgcttattaactgc 145 Score = 42.1 bits (21), Expect = 2.5 Identities = 75/93 (80%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggttccaaagactggcaaa 324 ||||||||||| || ||||| || | |||||||||||| |||| || |||| |||| Sbjct: 191 tgcaacatggtgctggagaatgtgaaggagatgtggaccaaggtacccaagagcagcaag 250 Query: 325 ggcaagaagaaggcccttccagtgaacaaggac 357 |||||||||||| || ||||| ||||||||| Sbjct: 251 ggcaagaagaagtccaagccagtcaacaaggac 283
>gb|AC115294.5| Mus musculus BAC clone RP23-97A19 from chromosome 3, complete sequence Length = 149451 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 140022 gtgaagaaggaggaggaggag 140042
>gb|AC124473.2| Mus musculus BAC clone RP24-86K23 from chromosome 3, complete sequence Length = 185436 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 73703 gtgaagaaggaggaggaggag 73723
>gb|AC126691.3| Mus musculus BAC clone RP23-221H11 from 14, complete sequence Length = 208027 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 122042 gtgaagaaggaggaggaggag 122062
>gb|AC164558.2| Mus musculus BAC clone RP23-238F5 from chromosome 16, complete sequence Length = 186421 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 110281 gtgaagaaggaggaggaggag 110301
>emb|CR663568.2|CNS0FAZA Tetraodon nigroviridis full-length cDNA Length = 945 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 245 gaagaaggaggaggaggagtt 265
>emb|AL133407.25| Human DNA sequence from clone RP3-395K14 on chromosome 6q13-14.3 Contains part of a novel gene, complete sequence Length = 163431 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 45448 gtgaagaaggaggaggaggag 45428
>gb|AC099307.1| Drosophila melanogaster, chromosome 2R, region 57C-57D, BAC clone BACR13H23, complete sequence Length = 179139 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 148278 gtgaagaaggaggaggaggag 148258
>gb|AC159231.2| Mus musculus BAC clone RP24-387F20 from chromosome 13, complete sequence Length = 150809 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 90083 gaagaaggaggaggaggagtt 90103
>gb|AC160946.6| Mus musculus 10 BAC RP23-175G6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192628 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 161179 gtgaagaaggaggaggaggag 161159
>emb|AL929071.6| Mouse DNA sequence from clone RP24-450M24 on chromosome 11 Contains the gene for a novel solute carrier family 13 (sodium-dependent dicarboxylate transporter) (Slc13a2 or 3) member, a novel gene, the gene for a novel TRAF-type zinc finger protein, the gene for a novel F-box domain containing protein, the Tekt1 gene for tektin 1 and a CpG island, complete sequence Length = 154561 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 142391 gtgaagaaggaggaggaggag 142411
>emb|AL713870.26| Mouse DNA sequence from clone RP24-239D8 on chromosome 11 Contains the 5' end of the Slc36a3 gene for solute carrier family 36 (proton/amino acid symporter) member 3, two novel genes, the Tramd1 gene for tramdorin 1 (transmembrane domain rich protein), the Slc36a1 gene for solute carrier family 36 (proton/amino acid symporter) member 1 and the gene for the ortholog of human and rat FAT tumor suppressor homolog 2 (Drosophila) FAT2, complete sequence Length = 188782 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 30384 gtgaagaaggaggaggaggag 30404
>gb|AC153965.4| Mus musculus 10 BAC RP24-377E21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 166350 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 18944 gtgaagaaggaggaggaggag 18924
>emb|AL645611.9| Mouse DNA sequence from clone RP23-432O24 on chromosome 11 Contains part of the Adamts2 gene for a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif 2, complete sequence Length = 69492 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 28870 gtgaagaaggaggaggaggag 28890
>dbj|AP003213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0054L14 Length = 150022 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 101314 gtgaagaaggaggaggaggag 101334
>dbj|AP002970.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0504D03 Length = 139201 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 50514 gtgaagaaggaggaggaggag 50534
>gb|AC016712.6| Homo sapiens BAC clone RP11-266F17 from 2, complete sequence Length = 159748 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 72052 gtgaagaaggaggaggaggag 72032
>gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A19, complete sequence Length = 161514 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 50273 gtgaagaaggaggaggaggag 50253
>gb|AC105029.7| Homo sapiens chromosome 8, clone CTD-2210A23, complete sequence Length = 123934 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 113341 gtgaagaaggaggaggaggag 113321
>gb|AC138245.11| Mus musculus chromosome 17, clone RP23-75D10, complete sequence Length = 216692 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 180944 gaagaaggaggaggaggagtt 180964
>gb|CP000061.1| Aster yellows witches'-broom phytoplasma AYWB, complete genome Length = 706569 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggagt 148 ||||||||||||||||||||| Sbjct: 673454 tgaagaaggaggaggaggagt 673474
>gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, complete sequence Length = 191331 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 174451 gaagaaggaggaggaggagtt 174431
>gb|AC153636.2| Mus musculus 6 BAC RP23-76E12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 164242 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 92764 gtgaagaaggaggaggaggag 92784
>gb|AC161883.6| Mus musculus BAC clone RP23-91K1 from chromosome 14, complete sequence Length = 206274 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 204669 gtgaagaaggaggaggaggag 204689
>emb|CR760591.2| Xenopus tropicalis finished cDNA, clone TEgg050o07 Length = 633 Score = 42.1 bits (21), Expect = 2.5 Identities = 54/65 (83%) Strand = Plus / Plus Query: 295 atgtggactgaggttccaaagactggcaaaggcaagaagaaggcccttccagtgaacaag 354 |||||||||||||| || |||| |||||| || || |||||| || ||||||||||| Sbjct: 233 atgtggactgaggtccctaagagtggcaagggaaaaaagaagtccaaaccagtgaacaaa 292 Query: 355 gacag 359 ||||| Sbjct: 293 gacag 297
>gb|BC087453.1| Xenopus laevis hypothetical LOC496154, mRNA (cDNA clone MGC:99274 IMAGE:7210989), complete cds Length = 2122 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 1000 gtgaagaaggaggaggaggag 1020
>gb|AC004300.1|AC004300 Drosophila melanogaster DNA sequence (P1 DS08209 (D186)), complete sequence Length = 58663 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 22373 gtgaagaaggaggaggaggag 22353
>gb|AC122017.5| Mus musculus BAC clone RP24-361J4 from 7, complete sequence Length = 158807 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 77767 gaagaaggaggaggaggagtt 77747
>emb|CT033772.6| Mouse DNA sequence from clone RP23-144A16 on chromosome 17, complete sequence Length = 214867 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 136093 gtgaagaaggaggaggaggag 136073
>emb|CT009604.11| Mouse DNA sequence from clone RP23-4J22 on chromosome 13, complete sequence Length = 209356 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagtt 149 ||||||||||||||||||||| Sbjct: 141624 gaagaaggaggaggaggagtt 141604
>gb|AC149064.3| Mus musculus BAC clone RP23-140I7 from 18, complete sequence Length = 183953 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 atgtgaagaaggaggaggagg 145 ||||||||||||||||||||| Sbjct: 84014 atgtgaagaaggaggaggagg 84034
>gb|AC170600.2| Mus musculus BAC clone RP23-300L16 from chromosome 14, complete sequence Length = 216861 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 127 gtgaagaaggaggaggaggag 147 ||||||||||||||||||||| Sbjct: 55793 gtgaagaaggaggaggaggag 55813
>ref|XM_001020481.1| Tetrahymena thermophila SB210 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain containing protein (TTHERM_00216110) mRNA, complete cds Length = 3180 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 519 tgtttaacagatgatatcaa 538 |||||||||||||||||||| Sbjct: 2300 tgtttaacagatgatatcaa 2281
>ref|XM_419552.2| PREDICTED: Gallus gallus hypothetical LOC421507 (LOC421507), mRNA Length = 1035 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 atgtgaagaaggaggaggag 144 |||||||||||||||||||| Sbjct: 854 atgtgaagaaggaggaggag 873
>gb|AC182558.2| Mimulus guttatus clone MGBa-11M20, complete sequence Length = 93638 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagt 148 |||||||||||||||||||| Sbjct: 50994 gaagaaggaggaggaggagt 50975
>emb|CT828951.1| Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA120L12, full insert sequence Length = 884 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 238 tgaagaaggaggaggaggag 257
>gb|AC184849.10| Canis Familiaris chromosome 11, clone XX-39P9, complete sequence Length = 214691 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 175546 tgaagaaggaggaggaggag 175527
>dbj|AK241576.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065180O15, full insert sequence Length = 1967 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agaaggaggaggaggagttc 150 |||||||||||||||||||| Sbjct: 1121 agaaggaggaggaggagttc 1140
>dbj|AK241410.1| Oryza sativa (japonica cultivar-group) cDNA, clone: J065159J08, full insert sequence Length = 569 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagttcag 152 ||||||||||||||||||| |||| Sbjct: 186 gaagaaggaggaggaggagatcag 163
>ref|XM_001197361.1| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC577113 (LOC577113), mRNA Length = 2025 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 237 tgaagaaggaggaggaggag 256
>ref|XM_777363.2| PREDICTED: Strongylocentrotus purpuratus hypothetical LOC577113 (LOC577113), mRNA Length = 2025 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 237 tgaagaaggaggaggaggag 256
>ref|XM_781748.2| PREDICTED: Strongylocentrotus purpuratus similar to secreted protein (LOC581762), mRNA Length = 1071 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 1062 tgaagaaggaggaggaggag 1043
>ref|NM_001068773.1| Oryza sativa (japonica cultivar-group) Os08g0516600 (Os08g0516600) mRNA, complete cds Length = 884 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 238 tgaagaaggaggaggaggag 257
>gb|AC186038.4| Pan troglodytes BAC clone CH251-558G8 from chromosome 9, complete sequence Length = 207290 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 192581 tgaagaaggaggaggaggag 192562
>emb|CR381673.8| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2, complete sequence Length = 209213 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 471 atgcagtcgctgttaagttt 490 |||||||||||||||||||| Sbjct: 204058 atgcagtcgctgttaagttt 204039
>gb|CP000441.1| Burkholderia cepacia AMMD chromosome 2, complete sequence Length = 2646969 Score = 40.1 bits (20), Expect = 9.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgatggcggaagaagcagctgcca 124 |||||||||||||||| ||||||| Sbjct: 2161193 cgatggcggaagaagccgctgcca 2161216
>ref|XR_021175.1| PREDICTED: Pan troglodytes hypothetical protein LOC741912 (LOC741912), mRNA Length = 768 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 ||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 408 tgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>gb|DQ768166.1| Taenia saginata isolate JDC2006 18S ribosomal RNA gene, partial sequence Length = 1069 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 482 tgaagaaggaggaggaggag 463
>gb|AC159124.14| Medicago truncatula clone mth2-172h20, complete sequence Length = 118120 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 24642 tgaagaaggaggaggaggag 24623
>ref|XR_019228.1| PREDICTED: Homo sapiens hypothetical LOC650068 (LOC650068), mRNA Length = 769 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 ||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 408 tgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>ref|XR_017390.1| PREDICTED: Homo sapiens hypothetical LOC645339 (LOC645339), mRNA Length = 769 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 265 tgcaacatggttctcgagaacgttagggagatgtggactgaggt 308 ||||||||||| || ||||| || | ||||||||| |||||||| Sbjct: 408 tgcaacatggtgctggagaatgtgaaggagatgtgtactgaggt 451
>gb|AC185246.3| Pan troglodytes BAC clone CH251-88N11 from chromosome 9, complete sequence Length = 165812 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 106852 tgaagaaggaggaggaggag 106833
>ref|XM_001121345.1| PREDICTED: Apis mellifera similar to CG6448-PA, isoform A (LOC725508), mRNA Length = 5142 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 agaaggaggaggaggagttc 150 |||||||||||||||||||| Sbjct: 806 agaaggaggaggaggagttc 825
>gb|AC159125.12| Medicago truncatula clone mth2-189o22, complete sequence Length = 131601 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 21788 tgaagaaggaggaggaggag 21807
>gb|AC186813.2| Mus musculus BAC clone CH25-78M18 from chromosome 10, complete sequence Length = 98494 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 42383 tgaagaaggaggaggaggag 42364
>emb|BX936392.23| Zebrafish DNA sequence from clone CH211-197O16 in linkage group 10, complete sequence Length = 180785 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 150910 tgaagaaggaggaggaggag 150929
>gb|AC188091.1| Mus musculus chromosome 10 clone RP24-130O14, complete sequence Length = 124761 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 88928 tgaagaaggaggaggaggag 88909
>ref|XM_001064784.1| PREDICTED: Rattus norvegicus similar to AI661453 protein (predicted) (RGD1561662_predicted), mRNA Length = 3421 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aggaggaggaggagttcagc 153 |||||||||||||||||||| Sbjct: 2495 aggaggaggaggagttcagc 2514
>ref|XM_236949.4| PREDICTED: Rattus norvegicus similar to AI661453 protein (predicted) (RGD1561662_predicted), mRNA Length = 4070 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 aggaggaggaggagttcagc 153 |||||||||||||||||||| Sbjct: 3144 aggaggaggaggagttcagc 3163
>ref|XM_001093720.1| PREDICTED: Macaca mulatta similar to LMBR1 domain containing 2 (LOC700369), mRNA Length = 8209 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 319 ggcaaaggcaagaagaaggc 338 |||||||||||||||||||| Sbjct: 2220 ggcaaaggcaagaagaaggc 2239
>gb|DQ157224.1| Taenia solium 18S ribosomal RNA gene, complete sequence Length = 2434 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 1904 tgaagaaggaggaggaggag 1885
>emb|CT030146.7| Mouse DNA sequence from clone RP24-150F7 on chromosome 12, complete sequence Length = 79717 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 79286 tgaagaaggaggaggaggag 79305
>ref|XM_976355.1| PREDICTED: Mus musculus similar to signal recognition particle 54, transcript variant 2 (LOC665155), mRNA Length = 5301 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 583 tgaagaaggaggaggaggag 602
>ref|XM_976391.1| PREDICTED: Mus musculus similar to signal recognition particle 54, transcript variant 3 (LOC665155), mRNA Length = 6782 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 2064 tgaagaaggaggaggaggag 2083
>ref|XR_002169.1| PREDICTED: Mus musculus hypothetical protein LOC668365 (LOC668365), mRNA Length = 385 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 183 tgaagaaggaggaggaggag 202
>gb|AC158956.6| Mus musculus chromosome 3, clone RP23-370F14, complete sequence Length = 174060 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 79034 tgaagaaggaggaggaggag 79015
>emb|CT030170.10| Mouse DNA sequence from clone RP23-45K23 on chromosome 12, complete sequence Length = 130202 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 84222 tgaagaaggaggaggaggag 84241
>emb|CT573013.7| Mouse DNA sequence from clone RP23-303A9 on chromosome 17, complete sequence Length = 109475 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 13539 tgaagaaggaggaggaggag 13520
>gb|AC099533.36| Pan troglodytes clone rp43-41g5, complete sequence Length = 226331 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 23777 tgaagaaggaggaggaggag 23758
>ref|XM_963683.1| PREDICTED: Tribolium castaneum similar to CG1249-PA (LOC657212), mRNA Length = 357 Score = 40.1 bits (20), Expect = 9.7 Identities = 38/44 (86%) Strand = Plus / Plus Query: 187 aagaacaatacccaggtacttatcaactgccggaacaacaagaa 230 |||||||| || ||||| || || |||||||| ||||||||||| Sbjct: 106 aagaacaacactcaggtgctgataaactgccgaaacaacaagaa 149
>ref|NM_115386.2| Arabidopsis thaliana RNA binding / structural constituent of ribosome (AT3G55280) mRNA, complete cds Length = 773 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 623 tcatagtttctattcagatc 642 |||||||||||||||||||| Sbjct: 740 tcatagtttctattcagatc 759
>gb|AC162942.5| Mus musculus BAC clone RP23-80K12 from chromosome 14, complete sequence Length = 227944 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 gaagaaggaggaggaggagt 148 |||||||||||||||||||| Sbjct: 61081 gaagaaggaggaggaggagt 61062
>gb|AC154516.2| Mus musculus BAC clone RP24-83D23 from chromosome 14, complete sequence Length = 216566 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 108397 tgaagaaggaggaggaggag 108378
>gb|AC167963.5| Mus musculus chromosome 1, clone RP24-171A4, complete sequence Length = 172954 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 66749 tgaagaaggaggaggaggag 66730
>gb|AC168306.7| Mus musculus chromosome 18, clone RP23-225N9, complete sequence Length = 198815 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 84907 tgaagaaggaggaggaggag 84926
>gb|AC168269.3| Mus musculus BAC clone RP23-193M17 from chromosome 17, complete sequence Length = 223337 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 184951 tgaagaaggaggaggaggag 184970
>gb|AC113013.15| Mus musculus chromosome 7, clone RP23-174K7, complete sequence Length = 235823 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 10384 tgaagaaggaggaggaggag 10365
>ref|XM_633891.1| Dictyostelium discoideum AX4 hypothetical protein (DDBDRAFT_0185647) mRNA, complete cds Length = 3963 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 267 tgaagaaggaggaggaggag 248
>gb|AC102381.12| Mus musculus chromosome 8, clone RP24-180I19, complete sequence Length = 190298 Score = 40.1 bits (20), Expect = 9.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 tgaagaaggaggaggaggag 147 |||||||||||||||||||| Sbjct: 140204 tgaagaaggaggaggaggag 140223 Database: All GenBank+EMBL+DDBJ+PDB sequences (but no EST, STS, GSS,environmental samples or phase 0, 1 or 2 HTGS sequences) Posted date: Dec 3, 2006 5:45 PM Number of letters in database: 18,610,659,111 Number of sequences in database: 4,638,285 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Sequences: 4638285 Number of Hits to DB: 107,641,621 Number of extensions: 7106529 Number of successful extensions: 493838 Number of sequences better than 10.0: 481 Number of HSP's gapped: 493751 Number of HSP's successfully gapped: 588 Length of query: 660 Length of database: 18,610,659,111 Length adjustment: 22 Effective length of query: 638 Effective length of database: 18,508,616,841 Effective search space: 11808497544558 Effective search space used: 11808497544558 X1: 11 (21.8 bits) X2: 15 (29.7 bits) X3: 25 (49.6 bits) S1: 14 (28.2 bits)