ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name FLbaf8l01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AK067630:Os07g0463400 30 4.1
2Os03g0187100:Os03g0187100 30 5.3

>AK067630:Os07g0463400 |
          Length = 361
 Score = 30.0 bits (66), Expect = 4.1
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = +2

Query: 1175 DADYCVGIYQSF*YLVCAFDFLYTWIFG--WISAGLHALSSVGLVLAW*SVFLL*FVV 1342
            D D+ + I +        F F++ WI G  WISAG  ALS     L W S+  L F V
Sbjct: 160  DGDFKLSIVKHLESANTMFSFIW-WIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDV 216



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>Os03g0187100:Os03g0187100 |
          Length = 1178

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
 Frame = -1

Query: 307 PTIKS*QIRSEDKAKLISR-DLN--QSSKVEKTIPTSTGQRRTNHRN*ASASTEDRT 146
           P+I S    S+   ++I+  DLN  ++SKVEK+ P    Q  +   +  SAST+D T
Sbjct: 237 PSIPSVPTGSDVNNEVITPFDLNKDENSKVEKSTPNRVSQGTSRRASVVSASTDDNT 293


  Database: orf_amino.fa.out
    Posted date:  Jul 26, 2007 11:37 AM
  Number of letters in database: 15,399,855
  Number of sequences in database:  40,041
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 40041
Number of Hits to DB: 37,500,326
Number of extensions: 820936
Number of successful extensions: 1631
Number of sequences better than 10.0: 2
Number of HSP's gapped: 1630
Number of HSP's successfully gapped: 2
Length of query: 464
Length of database: 15,399,855
Length adjustment: 104
Effective length of query: 360
Effective length of database: 11,235,591
Effective search space: 4044812760
Effective search space used: 4044812760
Neighboring words threshold: 12
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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